FFCP PHASE1:Mm9::chr8:4217113..4217126,-: Difference between revisions
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|id=chr8:4217113..4217126,-
|short_description=p5@BC068157
|description=CAGE_peak_5_at_BC068157_5end
|association_with_transcript=185bp_to_ENSMUST00000070717,ENSMUS...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=73072 | |EntrezGene=73072 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NVE5,E9PV26 | |UniProt=Q6NVE5,E9PV26 | ||
|association_with_transcript=185bp_to_ENSMUST00000070717,ENSMUST00000168386,NM_207203,uc012fzb.1_5end | |||
|cluster_id=chr8:4217113..4217126,- | |||
|description=CAGE_peak_5_at_BC068157_5end | |||
|id=chr8:4217113..4217126,- | |||
|ontology_enrichment_celltype=CL:0000540!1.39e-17!33;CL:0000047!1.39e-17!33;CL:0000031!1.39e-17!33;CL:0000404!1.39e-17!33;CL:0000117!7.64e-16!23;CL:0000337!7.64e-16!23;CL:0000393!3.22e-13!39;CL:0000211!3.22e-13!39;CL:0002319!7.38e-13!43;CL:0000221!2.55e-12!44;CL:0000133!2.55e-12!44;CL:0000055!1.37e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.25e-25,23;CL:0000337,6.25e-25,23;CL:0000540,8.21e-24,33;CL:0000047,8.21e-24,33;CL:0000031,8.21e-24,33;CL:0000404,8.21e-24,33;CL:0000393,7.31e-20,39;CL:0000211,7.31e-20,39;CL:0002319,7.71e-18,43;CL:0000221,2.17e-17,44;CL:0000133,2.17e-17,44;CL:0000120,2.59e-16,3;CL:0002613,6.53e-16,3;CL:0002612,1.16e-15,3;CL:0002321,3.33e-10,70;CL:0000723,2.22e-07,91;CL:0000048,2.22e-07,91;CL:0000034,8.50e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.43e-21!73;UBERON:0005743!1.43e-21!73;UBERON:0000073!1.71e-20!75;UBERON:0001016!1.71e-20!75;UBERON:0004121!1.11e-19!102;UBERON:0000924!1.11e-19!102;UBERON:0006601!1.11e-19!102;UBERON:0002346!1.30e-18!71;UBERON:0003075!1.30e-18!71;UBERON:0007284!1.30e-18!71;UBERON:0001049!4.86e-16!52;UBERON:0005068!4.86e-16!52;UBERON:0006241!4.86e-16!52;UBERON:0007135!4.86e-16!52;UBERON:0000033!2.16e-15!63;UBERON:0003056!1.41e-14!49;UBERON:0002020!1.74e-13!34;UBERON:0000955!7.09e-13!50;UBERON:0006238!7.09e-13!50;UBERON:0002616!3.70e-12!49;UBERON:0003080!6.31e-11!40;UBERON:0002780!1.64e-10!39;UBERON:0001890!1.64e-10!39;UBERON:0006240!1.64e-10!39;UBERON:0002791!1.17e-09!29;UBERON:0003528!1.17e-09!29;UBERON:0001893!1.17e-09!29;UBERON:0007811!4.03e-08!86;UBERON:0000153!8.23e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.16e-15,3;UBERON:0004121,3.56e-11,95;UBERON:0000924,3.56e-11,95;UBERON:0006601,3.56e-11,95;UBERON:0002420,2.95e-10,8;UBERON:0007245,2.95e-10,8;UBERON:0010009,2.95e-10,8;UBERON:0010011,2.95e-10,8;UBERON:0000454,2.95e-10,8;UBERON:0000369,9.26e-10,5;UBERON:0002435,9.26e-10,5;UBERON:0000204,9.26e-10,5;UBERON:0010082,9.26e-10,5;UBERON:0001017,1.06e-09,73;UBERON:0001948,1.30e-09,5;UBERON:0002315,1.30e-09,5;UBERON:0001016,2.17e-09,75;UBERON:0002020,2.01e-08,34;UBERON:0002240,4.32e-08,6;UBERON:0005174,4.32e-08,6;UBERON:0001137,4.32e-08,6;UBERON:0002346,1.07e-07,64;UBERON:0003075,1.07e-07,64;UBERON:0007284,1.07e-07,64;UBERON:0000013,1.78e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,2.83243045203437,2.11596391708813,3.80298842103708,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.270011876663381,0.630974884054146,0.856952953211411,0.662605622854841,1.10241719293459,0.862609239164127,0.919218786610021,0,0.383062014255563,0.307213066512487,3.16527090552465,4.20843160571084,1.04182674111352,0,1.12552522006336,0.45839474333043,2.06240009831567,1.70846016958924,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0,0,0,0,0,0.299581278809645,0.915001205637253,0.753926112677186,0.695297280769106,0,0.20778804455956,0,0.101839363850316,0,0,0,0.260240885925407,0.689706313300419,1.44049703844279,1.20563854268572,0.95251098811859,1.0249097622788,0.843315521037559,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.514523061896422,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0.861693590931196,0,0.445597348164788,0.849229592366497,1.21443210502468,0.292255857911312,1.58115111178609,0.963963949265421,0.141940085208269,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0.900305470156551,0.776152102696527,0.428674070063185,0.709360934569094,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.949007980743406,0.406638934253697,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0.900642406448441,0.906284817968409,0,0.62272408550506,2.79317411380722,1.02440163452481,0.729320151204882,0.838452650511929,0,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.448176066834085,0.574354689556133,0.476293691283074,0.347652977834566,0.578727661391115,0.824171801606613,0.294397840268795,0.342869252385415,0.887379030796687,0,0.436039249896986,0.282328141245992,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0.394017929502254,0,0,0.771626443924566,0.499621155875892,0.233931608445408,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,2.83243045203437,2.11596391708813,3.80298842103708,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.270011876663381,0.630974884054146,0.856952953211411,0.662605622854841,1.10241719293459,0.862609239164127,0.919218786610021,0,0.383062014255563,0.307213066512487,3.16527090552465,4.20843160571084,1.04182674111352,0,1.12552522006336,0.45839474333043,2.06240009831567,1.70846016958924,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0,0,0,0,0,0.299581278809645,0.915001205637253,0.753926112677186,0.695297280769106,0,0.20778804455956,0,0.101839363850316,0,0,0,0.260240885925407,0.689706313300419,1.44049703844279,1.20563854268572,0.95251098811859,1.0249097622788,0.843315521037559,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.514523061896422,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0.861693590931196,0,0.445597348164788,0.849229592366497,1.21443210502468,0.292255857911312,1.58115111178609,0.963963949265421,0.141940085208269,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0.900305470156551,0.776152102696527,0.428674070063185,0.709360934569094,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.949007980743406,0.406638934253697,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0.900642406448441,0.906284817968409,0,0.62272408550506,2.79317411380722,1.02440163452481,0.729320151204882,0.838452650511929,0,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.448176066834085,0.574354689556133,0.476293691283074,0.347652977834566,0.578727661391115,0.824171801606613,0.294397840268795,0.342869252385415,0.887379030796687,0,0.436039249896986,0.282328141245992,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0.394017929502254,0,0,0.771626443924566,0.499621155875892,0.233931608445408,0,0,0,0 | ||
|short_description=p5@BC068157 | |||
}} | }} |
Latest revision as of 00:22, 2 October 2015
Short description: | p5@BC068157 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_BC068157_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 185bp_to_ENSMUST00000070717, ENSMUST00000168386, NM_207203, uc012fzb.1_5end |
EntrezGene: | BC068157 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.25e-25 | 23 |
neuroblast (sensu Vertebrata) | 6.25e-25 | 23 |
neuron | 8.21e-24 | 33 |
neuronal stem cell | 8.21e-24 | 33 |
neuroblast | 8.21e-24 | 33 |
electrically signaling cell | 8.21e-24 | 33 |
electrically responsive cell | 7.31e-20 | 39 |
electrically active cell | 7.31e-20 | 39 |
neural cell | 7.71e-18 | 43 |
ectodermal cell | 2.17e-17 | 44 |
neurectodermal cell | 2.17e-17 | 44 |
granule cell | 2.59e-16 | 3 |
striatum neuron | 6.53e-16 | 3 |
neuron of the ventral spinal cord | 1.16e-15 | 3 |
embryonic cell | 3.33e-10 | 70 |
somatic stem cell | 2.22e-07 | 91 |
multi fate stem cell | 2.22e-07 | 91 |
stem cell | 8.50e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 1.16e-15 | 3 |
ectoderm-derived structure | 3.56e-11 | 95 |
ectoderm | 3.56e-11 | 95 |
presumptive ectoderm | 3.56e-11 | 95 |
basal ganglion | 2.95e-10 | 8 |
nuclear complex of neuraxis | 2.95e-10 | 8 |
aggregate regional part of brain | 2.95e-10 | 8 |
collection of basal ganglia | 2.95e-10 | 8 |
cerebral subcortex | 2.95e-10 | 8 |
corpus striatum | 9.26e-10 | 5 |
striatum | 9.26e-10 | 5 |
ventral part of telencephalon | 9.26e-10 | 5 |
future corpus striatum | 9.26e-10 | 5 |
central nervous system | 1.06e-09 | 73 |
regional part of spinal cord | 1.30e-09 | 5 |
gray matter of spinal cord | 1.30e-09 | 5 |
nervous system | 2.17e-09 | 75 |
gray matter | 2.01e-08 | 34 |
spinal cord | 4.32e-08 | 6 |
dorsal region element | 4.32e-08 | 6 |
dorsum | 4.32e-08 | 6 |
neurectoderm | 1.07e-07 | 64 |
neural plate | 1.07e-07 | 64 |
presumptive neural plate | 1.07e-07 | 64 |
sympathetic nervous system | 1.78e-07 | 3 |