FF:11226-116C2: Difference between revisions

Revision as of 14:54, 15 May 2017

Name:	CD8+ T Cells, donor1
Species:	Human (Homo sapiens)
Library ID:	CNhs10854
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	47 years old adult
sex	male
age	47
cell type	t cell, CD8+
cell line	NA
company	3HBiomedical
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	CD8T725
catalog number	3H100-26-10
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
sRNA-Seq		SAMD00013686

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10854		CAGE		DRX008195		DRR009067
sRNA-Seq		DRX012363		DRR013811

Accession ID Hg19

Library id		BAM		CTSS
CNhs10854		DRZ000492		DRZ001877
DRZ003012

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0.257
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.118
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.261
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.626
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.812
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.0798
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.449
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.781
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0.0798
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.837
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.588
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0.0798
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.605
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.117
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0798
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.0798
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0858
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.783
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.809
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.147
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0.534
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.344
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.00714
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.454
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.615
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.751
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.449
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0793
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.534
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.257
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.835
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.543
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.723
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.743
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.147
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.895
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.795
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0.719
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0.0798
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.751
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10854

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	4.78047e-5
MA0003.1	MA0003.1	0.369
MA0004.1	MA0004.1	0.896
MA0006.1	MA0006.1	0.213
MA0007.1	MA0007.1	0.216
MA0009.1	MA0009.1	0.0143
MA0014.1	MA0014.1	0.721
MA0017.1	MA0017.1	0.0621
MA0018.2	MA0018.2	4.7314e-11
MA0019.1	MA0019.1	0.688
MA0024.1	MA0024.1	0.746
MA0025.1	MA0025.1	0.0505
MA0027.1	MA0027.1	0.718
MA0028.1	MA0028.1	0.0019
MA0029.1	MA0029.1	0.939
MA0030.1	MA0030.1	8.66694e-4
MA0031.1	MA0031.1	3.75933e-6
MA0035.2	MA0035.2	0.194
MA0038.1	MA0038.1	0.114
MA0039.2	MA0039.2	0.387
MA0040.1	MA0040.1	0.799
MA0041.1	MA0041.1	0.242
MA0042.1	MA0042.1	0.655
MA0043.1	MA0043.1	3.67435e-5
MA0046.1	MA0046.1	0.0986
MA0047.2	MA0047.2	0.264
MA0048.1	MA0048.1	0.866
MA0050.1	MA0050.1	3.65412e-8
MA0051.1	MA0051.1	0.00216
MA0052.1	MA0052.1	0.0218
MA0055.1	MA0055.1	0.736
MA0057.1	MA0057.1	0.165
MA0058.1	MA0058.1	0.935
MA0059.1	MA0059.1	0.65
MA0060.1	MA0060.1	0.52
MA0061.1	MA0061.1	3.59376e-10
MA0062.2	MA0062.2	5.25739e-15
MA0065.2	MA0065.2	0.507
MA0066.1	MA0066.1	0.755
MA0067.1	MA0067.1	0.00137
MA0068.1	MA0068.1	0.872
MA0069.1	MA0069.1	0.98
MA0070.1	MA0070.1	0.521
MA0071.1	MA0071.1	0.948
MA0072.1	MA0072.1	0.00236
MA0073.1	MA0073.1	0.516
MA0074.1	MA0074.1	0.554
MA0076.1	MA0076.1	4.02483e-4
MA0077.1	MA0077.1	0.162
MA0078.1	MA0078.1	0.995
MA0079.2	MA0079.2	0.975
MA0080.2	MA0080.2	2.47901e-10
MA0081.1	MA0081.1	0.00642
MA0083.1	MA0083.1	0.266
MA0084.1	MA0084.1	0.2
MA0087.1	MA0087.1	0.604
MA0088.1	MA0088.1	0.307
MA0090.1	MA0090.1	1.34006e-4
MA0091.1	MA0091.1	0.251
MA0092.1	MA0092.1	0.757
MA0093.1	MA0093.1	0.822
MA0099.2	MA0099.2	0.991
MA0100.1	MA0100.1	0.625
MA0101.1	MA0101.1	4.79375e-7
MA0102.2	MA0102.2	0.422
MA0103.1	MA0103.1	0.69
MA0104.2	MA0104.2	0.547
MA0105.1	MA0105.1	9.23314e-7
MA0106.1	MA0106.1	0.0276
MA0107.1	MA0107.1	5.04468e-7
MA0108.2	MA0108.2	8.84494e-4
MA0111.1	MA0111.1	0.58
MA0112.2	MA0112.2	0.0514
MA0113.1	MA0113.1	0.307
MA0114.1	MA0114.1	0.114
MA0115.1	MA0115.1	0.147
MA0116.1	MA0116.1	0.367
MA0117.1	MA0117.1	0.00611
MA0119.1	MA0119.1	0.188
MA0122.1	MA0122.1	0.997
MA0124.1	MA0124.1	0.177
MA0125.1	MA0125.1	0.115
MA0131.1	MA0131.1	0.051
MA0135.1	MA0135.1	0.182
MA0136.1	MA0136.1	1.83799e-18
MA0137.2	MA0137.2	0.28
MA0138.2	MA0138.2	0.0146
MA0139.1	MA0139.1	0.645
MA0140.1	MA0140.1	0.339
MA0141.1	MA0141.1	0.0462
MA0142.1	MA0142.1	0.184
MA0143.1	MA0143.1	0.155
MA0144.1	MA0144.1	0.405
MA0145.1	MA0145.1	0.0201
MA0146.1	MA0146.1	0.863
MA0147.1	MA0147.1	0.54
MA0148.1	MA0148.1	0.471
MA0149.1	MA0149.1	0.833
MA0150.1	MA0150.1	0.315
MA0152.1	MA0152.1	0.00269
MA0153.1	MA0153.1	0.109
MA0154.1	MA0154.1	0.699
MA0155.1	MA0155.1	0.135
MA0156.1	MA0156.1	8.40116e-14
MA0157.1	MA0157.1	6.82279e-4
MA0159.1	MA0159.1	0.905
MA0160.1	MA0160.1	0.524
MA0162.1	MA0162.1	0.195
MA0163.1	MA0163.1	0.0508
MA0164.1	MA0164.1	0.848
MA0258.1	MA0258.1	0.354
MA0259.1	MA0259.1	0.623

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10854

Novel motif	Logo	P-value
1	1	0.817
10	10	0.0236
100	100	0.931
101	101	0.445
102	102	0.945
103	103	0.328
104	104	0.839
105	105	0.606
106	106	0.377
107	107	0.0142
108	108	0.432
109	109	0.978
11	11	0.984
110	110	0.188
111	111	0.715
112	112	0.726
113	113	0.314
114	114	0.868
115	115	0.284
116	116	0.112
117	117	0.0162
118	118	0.644
119	119	0.197
12	12	0.57
120	120	0.262
121	121	0.681
122	122	0.866
123	123	8.73851e-4
124	124	0.788
125	125	0.432
126	126	0.826
127	127	0.658
128	128	0.765
129	129	0.171
13	13	0.625
130	130	0.317
131	131	0.219
132	132	0.137
133	133	0.943
134	134	0.662
135	135	0.344
136	136	0.933
137	137	0.0643
138	138	0.727
139	139	0.197
14	14	0.575
140	140	0.946
141	141	0.687
142	142	0.356
143	143	0.0188
144	144	0.864
145	145	0.462
146	146	0.467
147	147	0.0165
148	148	0.474
149	149	0.108
15	15	0.456
150	150	0.975
151	151	0.701
152	152	0.725
153	153	0.539
154	154	0.182
155	155	0.0613
156	156	0.999
157	157	0.571
158	158	0.00776
159	159	0.764
16	16	0.172
160	160	0.0144
161	161	0.73
162	162	0.00913
163	163	0.879
164	164	0.17
165	165	0.811
166	166	0.276
167	167	0.172
168	168	0.578
169	169	0.0833
17	17	0.507
18	18	0.599
19	19	0.0163
2	2	0.147
20	20	0.152
21	21	0.711
22	22	0.162
23	23	0.528
24	24	0.557
25	25	0.217
26	26	0.651
27	27	0.497
28	28	0.361
29	29	0.11
3	3	0.828
30	30	0.0643
31	31	0.534
32	32	0.00255
33	33	0.411
34	34	0.311
35	35	0.486
36	36	0.137
37	37	0.52
38	38	0.496
39	39	0.38
4	4	0.634
40	40	0.772
41	41	0.13
42	42	0.437
43	43	0.818
44	44	0.596
45	45	0.127
46	46	0.773
47	47	0.875
48	48	0.802
49	49	0.382
5	5	0.725
50	50	0.476
51	51	0.843
52	52	0.774
53	53	0.381
54	54	0.84
55	55	0.524
56	56	0.716
57	57	0.683
58	58	0.244
59	59	0.144
6	6	0.852
60	60	0.738
61	61	0.289
62	62	0.437
63	63	0.649
64	64	0.86
65	65	0.334
66	66	0.68
67	67	0.397
68	68	0.716
69	69	0.732
7	7	0.837
70	70	0.398
71	71	0.468
72	72	0.46
73	73	0.716
74	74	0.764
75	75	0.0859
76	76	0.179
77	77	0.00134
78	78	0.93
79	79	0.95
8	8	0.197
80	80	0.0248
81	81	0.755
82	82	0.849
83	83	0.769
84	84	0.204
85	85	0.89
86	86	0.0743
87	87	0.993
88	88	0.894
89	89	0.00213
9	9	0.733
90	90	0.936
91	91	0.918
92	92	0.695
93	93	0.983
94	94	0.392
95	95	0.28
96	96	0.866
97	97	0.311
98	98	0.775
99	99	1.38602e-6

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10854

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr1:25256756..25256774,-!p1@RUNX3!2.40!457.04!RUNX3;;chr2:192015701..192015743,-!p1@STAT4!2.24!234.07!STAT4;;chr2:157189180..157189290,-!p1@NR4A2!2.09!602.20!NR4A2;;chr19:45971246..45971265,+!p1@FOSB!1.98!1660.43!FOSB;;chr19:54058073..54058088,+!p1@ZNF331!1.96!90.72!ZNF331;;chr17:45810594..45810608,+!p1@TBX21!1.96!90.12!TBX21;;chr19:54041669..54041697,+!p2@ZNF331!1.96!89.72!ZNF331;;chr9:117150254..117150271,-!p1@AKNA!1.84!180.64!AKNA;;chr20:50159198..50159299,-!p1@NFATC2!1.80!89.11!NFATC2;;chr7:50343634..50343717,+!p2@IKZF1!1.80!61.49!IKZF1;;chr14:75745523..75745537,+!p1@FOS!1.79!6708.87!FOS;;chr10:35484053..35484076,+!p1@CREM!1.79!146.97!CREM;;chr10:8096772..8096787,+!p2@GATA3!1.79!71.57!GATA3;;chr15:60884706..60884743,-!p1@RORA!1.75!274.99!RORA;;chr5:133451294..133451310,+!p2@TCF7!1.74!53.83!TCF7;;chr6:106546808..106546833,+!p3@PRDM1!1.72!63.91!PRDM1;;chr9:102584262..102584276,+!p1@NR4A3!1.71!110.08!NR4A3;;chr3:63953435..63953499,+!p1@ATXN7!1.71!50.40!ATXN7;;chr5:133450365..133450444,+!p1@TCF7!1.68!203.62!TCF7;;chr10:8096631..8096660,+!p1@GATA3!1.68!56.25!GATA3;;chr3:39195075..39195088,-!p1@CSRNP1!1.67!270.76!CSRNP1;;chr17:38020392..38020477,-!p1@IKZF3!1.67!45.76!IKZF3;;chr2:192015677..192015691,-!p3@STAT4!1.67!45.36!STAT4;;chr1:25291475..25291511,-!p2@RUNX3!1.66!44.76!RUNX3;;chr2:61108878..61108891,+!p5@REL!1.66!44.35!REL;;chr2:192015750..192015793,-!p2@STAT4!1.62!54.64!STAT4;;chrY:21906594..21906622,-!p1@KDM5D!1.62!40.93!KDM5D;;chr2:231090433..231090469,+!p1@SP140!1.62!40.32!SP140;;chr1:59249688..59249703,-!p3@JUN!1.59!215.92!JUN;;chr18:46475696..46475713,-!p1@SMAD7!1.59!42.54!SMAD7;;chr9:3525727..3525828,-!p2@RFX3!1.58!92.54!RFX3;;chr1:26697243..26697258,-!p1@ZNF683!1.58!36.89!ZNF683;;chr12:72056800..72056834,+!p1@THAP2!1.54!44.56!THAP2;;chr19:16435625..16435682,+!p1@KLF2!1.53!1010.25!KLF2;;chr14:64971288..64971316,-!p2@ZBTB25!1.53!98.99!ZBTB25;;chr1:59249707..59249727,-!p1@JUN!1.52!1269.72!JUN;;chrX:106960285..106960299,-!p1@TSC22D3!1.51!803.81!TSC22D3;;chr17:37934365..37934387,-!p2@IKZF3!1.49!29.64!IKZF3;;chr8:123793988..123794016,+!p1@ZHX2!1.48!50.20!ZHX2;;chr2:145271342..145271377,-!p5@ZEB2!1.47!28.83!ZEB2;;chr20:56195474..56195506,-!p1@ZBP1!1.47!28.63!ZBP1;;chr2:231090471..231090504,+!p2@SP140!1.47!28.22!SP140;;chr6:91006518..91006570,-!p1@BACH2!1.46!62.09!BACH2;;chr9:102584241..102584261,+!p4@NR4A3!1.46!42.74!NR4A3;;chr8:67525443..67525459,-!p2@MYBL1!1.46!40.93!MYBL1;;chr5:131826457..131826514,-!p1@IRF1!1.44!984.45!IRF1;;chr7:104654690..104654704,+!p2@MLL5!1.43!51.01!MLL5;;chr3:27763807..27763822,-!p1@EOMES!1.42!25.20!EOMES;;chr6:106546834..106546850,+!p4@PRDM1!1.41!24.60!PRDM1;;chr10:3824332..3824425,-!p4@KLF6!1.40!38.31!KLF6;;chr4:109087445..109087463,-!p1@LEF1!1.40!24.19!LEF1;;chr2:68592406..68592424,+!p1@PLEK!1.39!23.39!PLEK;;chr3:23986824..23986848,+!p2@NR1D2!1.38!126.21!NR1D2;;chr10:35484090..35484104,+!p6@CREM!1.38!22.98!CREM;;chr4:103422499..103422632,+!p1@NFKB1!1.37!450.79!NFKB1;;chr3:5020939..5020952,+!p2@BHLHE40!1.37!68.55!BHLHE40;;chr19:19729477..19729542,-!p1@PBX4!1.36!45.76!PBX4;;chr7:104654718..104654741,+!p3@MLL5!1.36!31.85!MLL5;;chr17:38497662..38497713,+!p4@RARA!1.36!25.20!RARA;;chr10:35416142..35416169,+!p3@CREM!1.35!55.24!CREM;;chr3:18486354..18486377,-!p2@SATB1!1.35!26.41!SATB1;;chr19:12902289..12902307,+!p1@JUNB!1.34!4643.00!JUNB;;chr12:72056773..72056796,+!p3@THAP2!1.34!26.81!THAP2;;chr13:74707894..74707947,-!p6@KLF12!1.34!23.39!KLF12;;chr5:133451347..133451358,+!p3@TCF7!1.34!20.77!TCF7;;chr21:36421347..36421380,-!p8@RUNX1!1.34!20.77!RUNX1;;chrX:106960221..106960236,-!p3@TSC22D3!1.32!53.83!TSC22D3;;chr7:50343895..50343936,+!p5@IKZF1!1.32!19.96!IKZF1;;chr2:43453734..43453751,-!p1@ZFP36L2!1.30!1935.42!ZFP36L2;;chrX:106960180..106960197,-!p2@TSC22D3!1.30!70.97!TSC22D3;;chr3:71542684..71542720,-!p18@FOXP1!1.30!18.95!FOXP1;;chr19:12721790..12721810,+!p2@ZNF791!1.29!50.20!ZNF791;;chr19:54041645..54041661,+!p5@ZNF331!1.29!18.55!ZNF331;;chr3:71355163..71355209,-!p5@FOXP1!1.27!24.19!FOXP1;;chr8:123793252..123793266,+!p10@ZHX2!1.27!17.54!ZHX2;;chr9:102584128..102584144,+!p3@NR4A3!1.26!32.46!NR4A3;;chr3:39195139..39195150,-!p3@CSRNP1!1.26!21.77!CSRNP1;;chr2:61108695..61108753,+!p1@REL!1.25!113.50!REL;;chr3:39195037..39195069,-!p2@CSRNP1!1.25!102.82!CSRNP1;;chr11:67007548..67007610,+!p3@KDM2A!1.24!119.75!KDM2A;;chr3:71542615..71542644,-!p12@FOXP1!1.24!16.53!FOXP1;;chr6:106546786..106546802,+!p6@PRDM1!1.24!16.53!PRDM1;;chr16:89789271..89789291,+!p5@ZNF276!1.23!15.93!ZNF276;;chr14:35873947..35873965,-!p1@NFKBIA!1.22!964.29!NFKBIA;;chr1:26697189..26697205,-!p2@ZNF683!1.21!15.32!ZNF683;;chr4:57522598..57522664,-!p3@HOPX!1.21!15.32!HOPX;;chr2:208394817..208394834,+!p3@CREB1!1.20!59.07!CREB1;;chr3:71542651..71542683,-!p22@FOXP1!1.20!14.92!FOXP1;;chr2:145277640..145277771,-!p1@ZEB2!1.19!191.53!ZEB2;;chr1:37940170..37940190,+!p1@ZC3H12A!1.19!175.40!ZC3H12A;;chr2:97202480..97202499,+!p1@ARID5A!1.19!144.35!ARID5A;;chr11:67007611..67007622,+!p6@KDM2A!1.19!19.35!KDM2A;;chr12:51158359..51158395,+!p4@ATF1!1.19!14.52!ATF1;;chr6:391743..391759,+!p1@IRF4!1.19!14.52!IRF4;;chr4:38665769..38665801,+!p2@KLF3!1.18!127.01!KLF3;;chr1:59249645..59249656,-!p4@JUN!1.18!35.68!JUN;;chr8:81397846..81397860,+!p3@ZBTB10!1.18!17.54!ZBTB10;;chr8:81397820..81397836,+!p2@ZBTB10!1.17!17.34!ZBTB10;;chr2:61108808..61108821,+!p3@REL!1.17!17.34!REL;;chr11:85375237..85375277,-!p4@CREBZF!1.17!15.73!CREBZF;;chr15:57211634..57211657,+!p5@TCF12!1.16!20.36!TCF12;;chr4:57522166..57522260,-!p2@HOPX!1.16!15.32!HOPX;;chr14:99738138..99738163,-!p1@BCL11B!1.16!13.31!BCL11B;;chr10:104154246..104154347,+!p3@NFKB2!1.15!80.64!NFKB2;;chr8:81397876..81397898,+!p5@ZBTB10!1.14!15.32!ZBTB10;;chr10:3827389..3827408,-!p1@KLF6!1.13!951.79!KLF6;;chr16:29819579..29819591,+!p32@MAZ!1.13!12.50!MAZ;;chr9:102584278..102584285,+!p5@NR4A3!1.12!12.30!NR4A3;;chr6:12009042..12009092,+!p6@HIVEP1!1.11!15.32!HIVEP1;;chr14:75746722..75746777,+!p2@FOS!1.11!15.32!FOS;;chr17:38020557..38020572,-!p4@IKZF3!1.11!11.89!IKZF3;;chr7:50344251..50344288,+!p3@IKZF1!1.11!11.89!IKZF1;;chr8:102218439..102218455,-!p3@ZNF706!1.11!11.89!ZNF706;;chr7:64838786..64838809,+!p2@ZNF92!1.10!65.93!ZNF92;;chr15:60884747..60884774,-!p3@RORA!1.10!28.63!RORA;;chr1:10754477..10754517,-!p1@CASZ1!1.10!19.56!CASZ1;;chr7:106809470..106809481,+!p2@HBP1!1.10!16.33!HBP1;;chr7:50344289..50344323,+!p1@IKZF1!1.10!11.49!IKZF1;;chr17:38020516..38020544,-!p5@IKZF3!1.10!11.49!IKZF3;;chr14:64971461..64971542,+!p1@ZBTB1!1.09!226.20!ZBTB1;;chr8:67525473..67525518,-!p1@MYBL1!1.09!26.01!MYBL1;;chr19:45972701..45972774,+!p2@FOSB!1.09!15.52!FOSB;;chr19:18392422..18392440,-!p1@JUND!1.08!1527.37!JUND;;chr8:60031619..60031676,-!p1@TOX!1.08!23.99!TOX;;chr6:91006575..91006602,-!p2@BACH2!1.08!16.33!BACH2;;chr5:142782823..142782854,-!p3@NR3C1!1.08!15.73!NR3C1;;chr2:68592394..68592405,+!p2@PLEK!1.08!11.09!PLEK;;chr15:31619326..31619390,+!p2@KLF13!1.07!124.79!KLF13;;chr3:63898321..63898396,+!p3@ATXN7!1.07!24.60!ATXN7;;chr2:157189617..157189667,-!p4@NR4A2!1.07!10.69!NR4A2;;chr2:97202991..97203043,+!p3@ARID5A!1.07!10.69!ARID5A;;chr9:32550839..32550962,-!p3@TOPORS!1.06!26.21!TOPORS;;chr3:18487057..18487105,-!p4@SATB1!1.04!10.08!SATB1;;chr4:109090075..109090095,-!p2@LEF1!1.04!10.08!LEF1;;chr16:29819630..29819645,+!p37@MAZ!1.04!9.88!MAZ;;chr7:137620650..137620677,-!p3@CREB3L2!1.04!9.88!CREB3L2;;chr11:67007477..67007493,+!p2@KDM2A!1.03!83.47!KDM2A;;chr3:71179699..71179744,-!p2@FOXP1!1.03!72.98!FOXP1;;chr7:17338324..17338341,+!p3@AHR!1.03!33.47!AHR;;chr16:79633894..79633954,-!p3@MAF!1.03!18.75!MAF;;chr12:72056749..72056767,+!p6@THAP2!1.03!10.89!THAP2;;chr11:128392085..128392232,-!p1@ETS1!1.02!320.76!ETS1;;chr13:74708029..74708077,-!p2@KLF12!1.02!27.82!KLF12;;chrX:106960249..106960260,-!p5@TSC22D3!1.02!15.32!TSC22D3;;chr20:44600199..44600219,-!p3@ZNF335!1.02!12.90!ZNF335;;chr14:90085458..90085557,-!p1@FOXN3!1.01!99.19!FOXN3;;chr1:91487774..91487802,-!p2@ZNF644!1.01!25.00!ZNF644;;chr19:47616992..47617011,-!p4@ZC3H4!1.01!20.16!ZC3H4;;chr10:35416125..35416138,+!p10@CREM!1.01!10.89!CREM;;chr2:28616358..28616380,+!p3@FOSL2!1.00!47.98!FOSL2;;chr11:128392273..128392308,-!p2@ETS1!1.00!39.11!ETS1;;chr14:64971438..64971450,+!p2@ZBTB1!1.00!21.37!ZBTB1;;chr17:36861735..36861755,+!p4@MLLT6!1.00!15.52!MLLT6;;chr15:31619407..31619419,+!p9@KLF13!1.00!11.29!KLF13;;chr17:45810816..45810838,+!p2@TBX21!1.00!9.07!TBX21;;chr16:79634624..79634642,-!p1@MAF!0.99!35.68!MAF;;chr6:106546731..106546755,+!p5@PRDM1!0.99!8.87!PRDM1;;chr12:57914286..57914304,-!p1@DDIT3!0.98!321.36!DDIT3;;chr4:38665810..38665827,+!p1@KLF3!0.98!128.22!KLF3;;chr7:99097863..99097936,-!p1@ZNF394!0.98!88.71!ZNF394;;chr9:102584159..102584174,+!p2@NR4A3!0.98!15.73!NR4A3;;chr3:150126904..150126958,+!p7@TSC22D2!0.98!15.32!TSC22D2;;chr7:127032330..127032356,-!p3@ZNF800!0.98!11.09!ZNF800;;chr14:99737588..99737617,-!p4@BCL11B!0.98!8.47!BCL11B;;chr19:54041574..54041589,+!p6@ZNF331!0.98!8.47!ZNF331;;chr13:41593425..41593480,-!p1@ELF1!0.97!54.23!ELF1;;chr6:45390269..45390298,+!p5@RUNX2!0.97!13.91!RUNX2;;chr7:50344144..50344157,+!p6@IKZF1!0.97!8.27!IKZF1;;chr4:57522513..57522548,-!p4@HOPX!0.97!8.27!HOPX;;chr13:41240717..41240735,-!p2@FOXO1!0.96!56.65!FOXO1;;chr6:45390300..45390335,+!p4@RUNX2!0.96!12.70!RUNX2;;chr10:35416223..35416234,+!p12@CREM!0.96!8.06!CREM;;chrY:2803415..2803468,+!p1@ZFY!0.96!8.06!ZFY;;chr15:31619140..31619152,+!p11@KLF13!0.96!8.06!KLF13;;chr1:59249732..59249749,-!p2@JUN!0.95!99.80!JUN;;chr1:45805693..45805718,+!p3@TOE1!0.95!17.54!TOE1;;chr14:64970670..64970712,-!p3@ZBTB25!0.95!17.54!ZBTB25;;chr8:41909982..41910009,-!p2@KAT6A!0.95!9.07!KAT6A;;chr16:88519743..88519754,+!p2@ZFPM1!0.95!8.67!ZFPM1;;chr1:92951607..92951661,-!p1@GFI1!0.95!7.86!GFI1;;chr1:14075903..14075940,+!p1@PRDM2!0.94!169.75!PRDM2;;chr22:38597987..38598021,+!p2@MAFF!0.94!49.19!MAFF;;chr6:143266297..143266356,-!p1@HIVEP2!0.94!38.31!HIVEP2;;chr16:68119324..68119364,+!p1@NFATC3!0.94!35.28!NFATC3;;chr1:91487836..91487854,-!p3@ZNF644!0.94!17.94!ZNF644;;chr1:25256175..25256228,-!p5@RUNX3!0.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ZBTB5;;chr12:19671171..19671175,+!p4@AEBP2!0.39!4.44!AEBP2;;chr13:74708475..74708499,-!p5@KLF12!0.39!4.44!KLF12;;chr18:5295679..5295734,-!p2@ZFP161!0.39!4.23!ZFP161;;chr19:36391434..36391450,-!p1@NFKBID!0.39!3.63!NFKBID;;chr11:85376097..85376108,-!p2@CREBZF!0.39!3.43!CREBZF;;chr21:34143999..34144016,-!p4@GCFC1!0.39!3.23!GCFC1;;chr18:77867177..77867197,+!p3@ADNP2!0.39!2.62!ADNP2;;chr1:6640110..6640130,+!p2@ZBTB48!0.39!2.22!ZBTB48;;chr20:46130727..46130734,+!p4@NCOA3!0.39!2.22!NCOA3;;chr20:49547674..49547685,-!p7@ADNP!0.39!2.22!ADNP;;chr4:144434814..144434932,+!p1@SMARCA5!0.38!109.07!SMARCA5;;chr18:51750948..51751059,-!p1@MBD2!0.38!69.76!MBD2;;chr1:91487553..91487612,-!p1@ZNF644!0.38!36.49!ZNF644;;chr22:21356016..21356105,-!p1@THAP7!0.38!33.87!THAP7;;chr6:122720765..122720831,+!p1@HSF2!0.38!28.63!HSF2;;chr14:100705200..100705237,+!p3@YY1!0.38!16.13!YY1;;chr7:99156434..99156510,+!p2@ZNF655!0.38!12.50!ZNF655;;chr12:46123464..46123512,+!p1@ARID2!0.38!11.89!ARID2;;chr12:53614115..53614154,-!p1@RARG!0.38!11.09!RARG;;chr6:7107999..7108031,+!p2@RREB1!0.38!11.09!RREB1;;chr19:45579725..45579743,-!p1@ZNF296!0.38!9.27!ZNF296;;chr16:3493446..3493510,-!p1@ZNF597!0.38!9.07!ZNF597;;chr17:7382856..7382889,-!p3@ZBTB4!0.38!8.06!ZBTB4;;chr1:8585945..8586056,-!p3@RERE!0.38!6.65!RERE;;chr19:18392250..18392260,-!p4@JUND!0.38!6.25!JUND;;chr19:37958318..37958365,-!p2@ZNF569!0.38!5.04!ZNF569;;chr1:211432887..211432903,+!p4@RCOR3!0.38!4.23!RCOR3;;chr1:6845582..6845591,+!p2@CAMTA1!0.38!3.63!CAMTA1;;chr2:231280954..231280965,+!p2@SP100!0.38!3.23!SP100;;chr17:38256799..38256815,-!p3@NR1D1!0.38!3.23!NR1D1;;chr4:87857474..87857489,+!p7@AFF1!0.38!3.02!AFF1;;chr1:156470494..156470505,-!p3@MEF2D!0.38!2.42!MEF2D;;chr8:71316403..71316427,-!p6@NCOA2!0.38!1.81!NCOA2;;chr19:39390697..39390713,+!p4@NFKBIB!0.38!1.61!NFKBIB;;chr15:77197781..77197801,-!p3@SCAPER!0.38!1.61!SCAPER;;chr15:67391010..67391046,+!p13@SMAD3!0.38!1.41!SMAD3;;chr16:79634447..79634462,-!p8@MAF!0.38!1.41!MAF;;chr17:38020381..38020390,-!p16@IKZF3!0.38!1.41!IKZF3;;chr18:3449488..3449499,+!p28@TGIF1!0.38!1.41!TGIF1;;chr19:16435423..16435484,+!p5@KLF2!0.38!1.41!KLF2;;chr19:18391785..18391792,-!p9@JUND!0.38!1.41!JUND;;chr7:50348268..50348366,+!p4@IKZF1!0.38!1.41!IKZF1;;chr2:214015343..214015366,-!p3@IKZF2!0.38!1.41!IKZF2;;chr2:24714729..24714761,+!p1@NCOA1!0.38!1.41!NCOA1;;chr2:28616301..28616302,+!p9@FOSL2!0.38!1.41!FOSL2;;chr4:103422811..103422822,+!p11@NFKB1!0.38!1.41!NFKB1;;chr4:149363637..149363651,-!p4@NR3C2!0.38!1.41!NR3C2;;chr10:76586164..76586180,+!p8@KAT6B!0.38!1.41!KAT6B;;chr14:35872542..35872553,-!p10@NFKBIA!0.38!1.41!NFKBIA;;chr19:38085954..38085963,-!p12@ZNF571!0.38!1.41!ZNF571;;chr1:227751287..227751298,+!p2@ZNF678!0.38!1.41!ZNF678;;chr1:25291648..25291665,-!p7@RUNX3!0.38!1.41!RUNX3;;chr1:42384532..42384603,-!p2@HIVEP3!0.38!1.41!HIVEP3;;chr20:56195509..56195520,-!p3@ZBP1!0.38!1.41!ZBP1;;chr21:30671121..30671126,+!p14@BACH1!0.38!1.41!BACH1;;chrX:70503833..70503843,+!p22@NONO!0.38!1.41!NONO;;chrX:131623967..131623978,-!p11@MBNL3!0.38!1.41!MBNL3;;chr19:50879705..50879775,+!p1@NR1H2!0.37!100.00!NR1H2;;chr1:168195229..168195294,+!p1@SFT2D2,p1@TBX19!0.37!95.56!TBX19;;chr5:150080543..150080664,-!p1@RBM22!0.37!91.33!RBM22;;chr5:138629349..138629386,+!p3@MATR3!0.37!34.47!MATR3;;chr8:28747884..28747938,+!p1@HMBOX1!0.37!26.21!HMBOX1;;chr5:132299210..132299228,-!p3@AFF4!0.37!24.39!AFF4;;chr1:247095194..247095235,-!p1@AHCTF1!0.37!22.18!AHCTF1;;chr1:247095236..247095283,-!p2@AHCTF1!0.37!21.98!AHCTF1;;chr1:151254738..151254787,+!p1@ZNF687!0.37!19.15!ZNF687;;chr17:40897043..40897087,-!p1@EZH1!0.37!18.55!EZH1;;chr1:8877692..8877732,-!p1@RERE!0.37!16.53!RERE;;chr4:7045042..7045145,+!p1@TADA2B!0.37!15.32!TADA2B;;chr4:2263861..2263883,-!p2@MXD4!0.37!12.10!MXD4;;
+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000625;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
 |ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790
 |fonse_cell_line=

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FF:11226-116C2: Difference between revisions

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Revision as of 14:54, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0