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{{f5samples
{{f5samples
|id=FF:10002-101A5
|DRA_sample_Accession=CAGE@SAMD00005009
|name=SABiosciences XpressRef Human Universal Total RNA, pool1
|HumanCAGEScanFiles=NCig10013;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/SABiosciences%2520XpressRef%2520Human%2520Universal%2520Total%2520RNA%252c%2520pool1.NCig10013.10002-101A5.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/SABiosciences%2520XpressRef%2520Human%2520Universal%2520Total%2520RNA%252c%2520pool1.NCig10013.10002-101A5.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/SABiosciences%2520XpressRef%2520Human%2520Universal%2520Total%2520RNA%252c%2520pool1.NCig10013.10002-101A5.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/SABiosciences%2520XpressRef%2520Human%2520Universal%2520Total%2520RNA%252c%2520pool1.NCig10013.10002-101A5.hg19.GCTATA.pairs.bed.gz
|sample_id=10002
|accession_numbers=CAGE;DRX008610;DRR009482;DRZ000907;DRZ002292;DRZ012257;DRZ013642
|rna_tube_id=101A5
|ancestors_in_anatomy_facet=UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|rna_box=101
|rna_position=A5
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=SABiosciences
|rna_lot_number=B208251
|rna_catalog_number=Cat:GA-004
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=UNDEFINED
|sample_tissue=unclassifiable
|sample_donor(cell lot)=10-20 pool
|sample_sex=mixed
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=100
|rna_concentration=1
|sample_note=
|profile_hcage=CNhs10610,LSID656,release008,COMPLETED
|profile_cagescan=NCig10013,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000004
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!3.33!2150.16!SEBOX;;chr4:57547454..57547469,-!p1@HOPX!2.64!438.03!HOPX;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!2.62!418.66!SEBOX;;chr17:26697257..26697268,-!p3@SEBOX,p3@VTN!2.22!165.28!SEBOX;;chr6:134210243..134210257,+!p1@TCF21!2.14!136.84!TCF21;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.04!109.12!PEG3;;chr1:214161272..214161322,+!p1@PROX1!1.85!96.55!PROX1;;chr6:53013620..53013644,-!p1@GCM1!1.81!62.86!GCM1;;chr7:73038839..73038862,-!p1@MLXIPL!1.72!51.93!MLXIPL;;chr11:47400078..47400106,-!p1@SPI1!1.72!51.73!SPI1;;chr1:151804244..151804310,-!p1@RORC!1.69!48.53!RORC;;chr15:53082521..53082549,-!p1@ONECUT1!1.69!48.12!ONECUT1;;chr8:135708787..135708805,-!p2@ZFAT!1.69!48.02!ZFAT;;chr6:10412600..10412637,-!p1@TFAP2A!1.63!68.11!TFAP2A;;chr17:53344980..53345011,+!p3@HLF!1.62!41.01!HLF;;chr17:53344945..53344977,+!p2@HLF!1.62!40.29!HLF;;chr2:68592406..68592424,+!p1@PLEK!1.59!38.02!PLEK;;chrX:131547625..131547644,-!p4@MBNL3!1.59!37.61!MBNL3;;chr6:10415276..10415341,-!p2@TFAP2A!1.55!41.42!TFAP2A;;chr20:43029862..43029900,+!p1@HNF4A!1.55!34.72!HNF4A;;chr12:100867653..100867677,+!p2@NR1H4!1.55!34.31!NR1H4;;chr1:201979703..201979721,+!p2@ELF3!1.55!34.21!ELF3;;chr16:86544113..86544145,+!p1@FOXF1!1.54!41.01!FOXF1;;chr1:201979743..201979762,+!p1@ELF3!1.54!33.39!ELF3;;chr19:33793430..33793447,-!p1@CEBPA!1.53!133.03!CEBPA;;chr8:10588010..10588030,-!p1@SOX7!1.49!30.09!SOX7;;chr21:39870339..39870443,-!p1@ERG!1.49!29.88!ERG;;chr1:27240455..27240474,-!p1@NR0B2!1.47!28.54!NR0B2;;chr20:62680984..62680999,-!p1@SOX18!1.43!34.00!SOX18;;chr3:128212033..128212051,-!p1@GATA2!1.43!26.07!GATA2;;chrX:66763856..66763896,+!p1@AR!1.42!36.27!AR;;chr4:174451370..174451387,-!p1@HAND2!1.41!24.52!HAND2;;chr16:85932760..85932775,+!p1@IRF8!1.40!23.91!IRF8;;chr2:46524897..46524911,+!p2@EPAS1!1.39!64.71!EPAS1;;chr22:41763452..41763466,+!p2@TEF!1.39!23.39!TEF;;chr3:12330560..12330579,+!p1@PPARG!1.38!26.38!PPARG;;chr1:161208013..161208038,-!p1@NR1I3!1.38!23.08!NR1I3;;chr12:100867627..100867652,+!p1@NR1H4!1.38!23.08!NR1H4;;chr19:46367576..46367592,+!p1@FOXA3!1.37!22.67!FOXA3;;chr15:42749722..42749739,-!p2@ZFP106!1.35!37.71!ZFP106;;chr17:80797886..80797906,-!p1@ZNF750!1.34!21.02!ZNF750;;chr17:53342311..53342400,+!p1@HLF!1.32!22.67!HLF;;chr8:76319876..76319926,+!p1@HNF4G!1.32!20.09!HNF4G;;chrX:131547596..131547609,-!p10@MBNL3!1.32!19.68!MBNL3;;chr16:79634624..79634642,-!p1@MAF!1.31!75.63!MAF;;chr19:4153613..4153652,+!p1@CREB3L3!1.31!19.47!CREB3L3;;chr20:62365971..62365986,+!p5@ZGPAT!1.31!19.27!ZGPAT;;chr21:34442439..34442455,+!p1@OLIG1!1.30!19.06!OLIG1;;chr7:96654133..96654150,-!p1@DLX5!1.30!18.96!DLX5;;chr3:126076242..126076257,-!p1@KLF15!1.29!23.18!KLF15;;chr1:216896752..216896778,-!p1@ESRRG!1.29!18.34!ESRRG;;chr1:40105299..40105326,-!p1@HEYL!1.29!18.34!HEYL;;chr4:87857474..87857489,+!p7@AFF1!1.28!31.43!AFF1;;chr1:209979467..209979494,-!p1@IRF6!1.28!20.40!IRF6;;chr1:199996733..199996781,+!p1@NR5A2!1.28!17.93!NR5A2;;chr8:102504651..102504683,+!p1@GRHL2!1.28!17.93!GRHL2;;chr20:55204351..55204377,+!p1@TFAP2C!1.27!22.36!TFAP2C;;chrX:70319128..70319142,+!p3@FOXO4!1.27!17.52!FOXO4;;chr10:8096631..8096660,+!p1@GATA3!1.26!20.92!GATA3;;chr7:115670804..115670825,-!p1@TFEC!1.26!17.21!TFEC;;chr1:61548225..61548299,+!p1@NFIA!1.25!212.37!NFIA;;chrX:70316005..70316034,+!p2@FOXO4!1.25!29.98!FOXO4;;chr7:15726296..15726315,-!p1@MEOX2!1.25!16.80!MEOX2;;chr19:46801639..46801699,+!p1@HIF3A!1.25!16.69!HIF3A;;chr20:43030002..43030028,+!p3@HNF4A!1.25!16.59!HNF4A;;chr11:113930425..113930471,+!p1@ZBTB16!1.23!23.08!ZBTB16;;chr1:6479968..6479986,-!p1@HES2!1.23!16.18!HES2;;chr10:8096772..8096787,+!p2@GATA3!1.22!18.34!GATA3;;chr1:161207986..161207998,-!p2@NR1I3!1.21!15.15!NR1I3;;chr5:71803177..71803255,-!p1@ZNF366!1.19!14.53!ZNF366;;chr14:38064429..38064486,-!p1@FOXA1!1.19!14.43!FOXA1;;chr2:145277882..145277967,-!p3@ZEB2!1.18!24.32!ZEB2;;chr17:59529743..59529798,+!p1@TBX4!1.18!14.22!TBX4;;chr12:24715376..24715432,-!p1@SOX5!1.17!17.62!SOX5;;chr6:151977801..151977813,+!p8@ESR1!1.17!13.81!ESR1;;chr8:71316428..71316459,-!p2@NCOA2!1.14!21.43!NCOA2;;chr1:216896780..216896800,-!p2@ESRRG!1.14!12.78!ESRRG;;chr11:34642612..34642646,+!p1@EHF!1.13!12.47!EHF;;chr4:87856129..87856186,+!p1@AFF1!1.12!166.00!AFF1;;chr2:10091815..10091864,+!p1@GRHL1!1.12!16.07!GRHL1;;chr7:28725715..28725727,+!p3@CREB5!1.12!14.43!CREB5;;chr19:50432453..50432468,+!p1@ATF5!1.11!664.61!ATF5;;chr4:87856191..87856208,+!p2@AFF1!1.11!94.90!AFF1;;chr11:113930291..113930339,+!p2@ZBTB16!1.10!18.96!ZBTB16;;chr5:2751762..2751784,-!p1@IRX2!1.10!11.64!IRX2;;chr20:22564895..22564910,-!p1@FOXA2!1.10!11.54!FOXA2;;chr2:122042770..122042785,-!p1@TFCP2L1!1.09!11.44!TFCP2L1;;chr1:42801540..42801562,-!p4@FOXJ3!1.09!11.23!FOXJ3;;chr6:10412392..10412409,-!p4@TFAP2A!1.08!12.47!TFAP2A;;chr6:10415484..10415508,-!p3@TFAP2A!1.08!11.13!TFAP2A;;chr13:72441315..72441454,-!p1@DACH1!1.07!21.84!DACH1;;chr10:8095593..8095625,+!p3@GATA3!1.07!12.67!GATA3;;chr18:53068911..53068935,-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|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
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|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/SABiosciences%2520XpressRef%2520Human%2520Universal%2520Total%2520RNA%252c%2520pool1.CNhs10610.10002-101A5.hg38.nobarcode.ctss.bed.gz
|id=FF:10002-101A5
|is_a=FF:0000004;;FF:0000210
|is_obsolete=
|library_id=CNhs10610
|library_id_phase_based=2:CNhs10610
|name=SABiosciences XpressRef Human Universal Total RNA, pool1
|namespace=
|part_of=
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|profile_hcage=CNhs10610,LSID656,release008,COMPLETED
|profile_rnaseq=
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|rna_box=101
|rna_catalog_number=Cat:GA-004
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=B208251
|rna_od260/230=
|rna_od260/280=
|rna_position=A5
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=101A5
|rna_weight_ug=100
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=SABiosciences
|sample_description=
|sample_dev_stage=UNDEFINED
|sample_disease=normal
|sample_donor(cell lot)=10-20 pool
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.05030023859617e-282!GO:0005737;cytoplasm;8.48111009365538e-189!GO:0044444;cytoplasmic part;6.96788228969975e-147!GO:0043227;membrane-bound organelle;5.48955158312082e-99!GO:0043231;intracellular membrane-bound organelle;5.48955158312082e-99!GO:0043226;organelle;2.37750604268466e-92!GO:0043229;intracellular organelle;4.14854752212074e-92!GO:0044422;organelle part;8.6322602934089e-71!GO:0044446;intracellular organelle part;1.59772886685533e-69!GO:0005515;protein binding;1.46935131740421e-68!GO:0005739;mitochondrion;6.10818656036047e-62!GO:0044237;cellular metabolic process;7.41622032822577e-59!GO:0044238;primary metabolic process;1.14817315095271e-54!GO:0031090;organelle membrane;9.61264912412914e-51!GO:0032991;macromolecular complex;3.70077153814542e-42!GO:0009058;biosynthetic process;3.91461185919483e-41!GO:0044429;mitochondrial part;1.34345399180002e-40!GO:0043233;organelle lumen;1.25129435235659e-39!GO:0031974;membrane-enclosed lumen;1.25129435235659e-39!GO:0030529;ribonucleoprotein complex;7.36382710369961e-39!GO:0019538;protein metabolic process;1.48211858943318e-37!GO:0005783;endoplasmic reticulum;9.44196045440293e-37!GO:0044249;cellular biosynthetic process;3.71869520119179e-35!GO:0044260;cellular macromolecule metabolic process;3.05149648782865e-33!GO:0005829;cytosol;4.43892666842633e-33!GO:0044267;cellular protein metabolic process;1.04779682892829e-31!GO:0003723;RNA binding;3.19746062207034e-31!GO:0031967;organelle envelope;5.15749582897859e-31!GO:0031975;envelope;1.01476989225712e-30!GO:0016491;oxidoreductase activity;1.35634055216374e-30!GO:0033036;macromolecule localization;2.57629688980041e-30!GO:0015031;protein transport;2.57661049788601e-29!GO:0006412;translation;8.21549248436219e-29!GO:0043170;macromolecule metabolic process;9.33836351368226e-29!GO:0045184;establishment of protein localization;1.04955390565996e-28!GO:0008104;protein localization;2.77352650995721e-28!GO:0044432;endoplasmic reticulum part;3.11021996140623e-27!GO:0009059;macromolecule biosynthetic process;9.06460098939299e-27!GO:0016043;cellular component organization and biogenesis;9.5059283262045e-27!GO:0006082;organic acid metabolic process;2.35156346355683e-26!GO:0005840;ribosome;3.28959666684209e-26!GO:0019752;carboxylic acid metabolic process;1.38916273837502e-25!GO:0005740;mitochondrial envelope;1.38916273837502e-25!GO:0031966;mitochondrial membrane;3.97103196005872e-25!GO:0019866;organelle inner membrane;2.89636241306523e-24!GO:0044428;nuclear part;3.85256619730302e-24!GO:0044248;cellular catabolic process;8.83995391944525e-24!GO:0005743;mitochondrial inner membrane;1.58476619436182e-23!GO:0012505;endomembrane system;2.29137389408133e-23!GO:0003735;structural constituent of ribosome;1.62180433816602e-22!GO:0005789;endoplasmic reticulum membrane;5.34770015990084e-22!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.61440003521857e-22!GO:0046907;intracellular transport;9.07504475141402e-22!GO:0044255;cellular lipid metabolic process;9.87915571881928e-22!GO:0006950;response to stress;1.7669960858115e-21!GO:0006629;lipid metabolic process;1.96598830841777e-21!GO:0043234;protein complex;4.18098108963771e-21!GO:0031980;mitochondrial lumen;8.92413692927842e-21!GO:0005759;mitochondrial matrix;8.92413692927842e-21!GO:0006886;intracellular protein transport;1.92968891661891e-20!GO:0033279;ribosomal subunit;2.17504446963481e-20!GO:0006091;generation of precursor metabolites and energy;2.95490799110758e-19!GO:0016071;mRNA metabolic process;8.73172985064258e-19!GO:0008380;RNA splicing;2.1426804877858e-18!GO:0009056;catabolic process;6.91010103059186e-18!GO:0006119;oxidative phosphorylation;2.11436426538457e-17!GO:0065003;macromolecular complex assembly;2.12632038454684e-17!GO:0009055;electron carrier activity;5.32978506747479e-17!GO:0048770;pigment granule;5.43161503822343e-17!GO:0042470;melanosome;5.43161503822343e-17!GO:0032787;monocarboxylic acid metabolic process;9.92390942493719e-17!GO:0008134;transcription factor binding;7.45526701397208e-16!GO:0006396;RNA processing;1.70520402091139e-15!GO:0022607;cellular component assembly;1.70520402091139e-15!GO:0006397;mRNA processing;2.36456676393689e-15!GO:0031981;nuclear lumen;3.46419603465979e-15!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.52871792924761e-15!GO:0051186;cofactor metabolic process;3.76565843150706e-15!GO:0016192;vesicle-mediated transport;4.25611580897456e-14!GO:0006457;protein folding;7.1930165548265e-14!GO:0051641;cellular localization;9.30530419148628e-14!GO:0051649;establishment of cellular localization;1.75071161543891e-13!GO:0044445;cytosolic part;2.28247395552078e-13!GO:0008219;cell death;2.38428635294063e-13!GO:0016265;death;2.38428635294063e-13!GO:0005681;spliceosome;3.48193410965269e-13!GO:0044265;cellular macromolecule catabolic process;4.49524984207713e-13!GO:0006915;apoptosis;7.18144710654988e-13!GO:0012501;programmed cell death;7.18144710654988e-13!GO:0044455;mitochondrial membrane part;1.3365288050155e-12!GO:0005746;mitochondrial respiratory chain;1.4538943925457e-12!GO:0048523;negative regulation of cellular process;1.94155645311926e-12!GO:0006118;electron transport;3.20208768807143e-12!GO:0002526;acute inflammatory response;3.29834316285721e-12!GO:0009611;response to wounding;4.66412784797384e-12!GO:0015935;small ribosomal subunit;5.08291744830376e-12!GO:0048519;negative regulation of biological process;5.44250101664117e-12!GO:0006732;coenzyme metabolic process;5.81651666245463e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.73878542829778e-12!GO:0005773;vacuole;7.15996464919945e-12!GO:0005794;Golgi apparatus;7.72964043827111e-12!GO:0048037;cofactor binding;9.3390804233833e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;1.03920942735909e-11!GO:0016874;ligase activity;1.76335712063148e-11!GO:0019941;modification-dependent protein catabolic process;2.07543301922307e-11!GO:0043632;modification-dependent macromolecule catabolic process;2.07543301922307e-11!GO:0006511;ubiquitin-dependent protein catabolic process;2.52677420391378e-11!GO:0008202;steroid metabolic process;2.55752479417259e-11!GO:0050136;NADH dehydrogenase (quinone) activity;2.56336985617386e-11!GO:0003954;NADH dehydrogenase activity;2.56336985617386e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.56336985617386e-11!GO:0044257;cellular protein catabolic process;3.05889974990194e-11!GO:0006605;protein targeting;3.2666600938249e-11!GO:0006807;nitrogen compound metabolic process;4.01671818377585e-11!GO:0005792;microsome;4.0736657327084e-11!GO:0051082;unfolded protein binding;5.88124626538061e-11!GO:0022618;protein-RNA complex assembly;5.88124626538061e-11!GO:0042598;vesicular fraction;8.18632293346818e-11!GO:0005634;nucleus;8.76945301956036e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.31673711147678e-10!GO:0000323;lytic vacuole;1.33801272190988e-10!GO:0005764;lysosome;1.33801272190988e-10!GO:0009057;macromolecule catabolic process;1.77908258603262e-10!GO:0005654;nucleoplasm;2.31046861977807e-10!GO:0005793;ER-Golgi intermediate compartment;4.77153559926772e-10!GO:0002541;activation of plasma proteins during acute inflammatory response;5.39093336763951e-10!GO:0006956;complement activation;5.39093336763951e-10!GO:0003712;transcription cofactor activity;5.39093336763951e-10!GO:0000502;proteasome complex (sensu Eukaryota);6.14565293859583e-10!GO:0008610;lipid biosynthetic process;7.8681124553962e-10!GO:0006066;alcohol metabolic process;8.92572998216858e-10!GO:0043285;biopolymer catabolic process;9.44858835321309e-10!GO:0051246;regulation of protein metabolic process;9.54906407123334e-10!GO:0030964;NADH dehydrogenase complex (quinone);1.53752613940447e-09!GO:0045271;respiratory chain complex I;1.53752613940447e-09!GO:0005747;mitochondrial respiratory chain complex I;1.53752613940447e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.62624288126371e-09!GO:0006631;fatty acid metabolic process;1.8735148301838e-09!GO:0006461;protein complex assembly;2.02052052289033e-09!GO:0048193;Golgi vesicle transport;2.0702340918378e-09!GO:0042775;organelle ATP synthesis coupled electron transport;2.0702340918378e-09!GO:0042773;ATP synthesis coupled electron transport;2.0702340918378e-09!GO:0006958;complement activation, classical pathway;2.09386888661603e-09!GO:0009308;amine metabolic process;2.1371193082848e-09!GO:0015934;large ribosomal subunit;2.16377550823669e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.13718648306148e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.76543631911704e-09!GO:0030163;protein catabolic process;4.40306884110747e-09!GO:0008135;translation factor activity, nucleic acid binding;4.99661128863504e-09!GO:0005768;endosome;5.00636899953281e-09!GO:0050662;coenzyme binding;5.21846482602331e-09!GO:0006520;amino acid metabolic process;6.59302775904463e-09!GO:0002455;humoral immune response mediated by circulating immunoglobulin;7.84350005370344e-09!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;1.07837903640342e-08!GO:0016125;sterol metabolic process;1.28109847010803e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.35025920696064e-08!GO:0006519;amino acid and derivative metabolic process;1.50637272832847e-08!GO:0043069;negative regulation of programmed cell death;1.57278038030358e-08!GO:0044451;nucleoplasm part;1.8524451826499e-08!GO:0043066;negative regulation of apoptosis;1.96770421041622e-08!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;2.85234292297349e-08!GO:0006446;regulation of translational initiation;2.85451059735841e-08!GO:0006913;nucleocytoplasmic transport;4.04407317346973e-08!GO:0016817;hydrolase activity, acting on acid anhydrides;4.44782097105348e-08!GO:0016044;membrane organization and biogenesis;4.46087570788975e-08!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.10452916649362e-08!GO:0005761;mitochondrial ribosome;5.85123768584608e-08!GO:0000313;organellar ribosome;5.85123768584608e-08!GO:0042981;regulation of apoptosis;6.33002693212525e-08!GO:0016462;pyrophosphatase activity;6.33002693212525e-08!GO:0000166;nucleotide binding;6.33002693212525e-08!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;6.35888676064194e-08!GO:0051169;nuclear transport;9.13691392234618e-08!GO:0006996;organelle organization and biogenesis;1.20584807323143e-07!GO:0008203;cholesterol metabolic process;1.24910489047153e-07!GO:0043067;regulation of programmed cell death;1.32333906472688e-07!GO:0031988;membrane-bound vesicle;1.44154561939881e-07!GO:0016564;transcription repressor activity;1.51661463470344e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.54440020416858e-07!GO:0031982;vesicle;1.61774880438207e-07!GO:0017111;nucleoside-triphosphatase activity;1.8706647751043e-07!GO:0015986;ATP synthesis coupled proton transport;2.48776160547329e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.48776160547329e-07!GO:0005777;peroxisome;2.78152501906194e-07!GO:0042579;microbody;2.78152501906194e-07!GO:0006413;translational initiation;3.05850857039676e-07!GO:0008565;protein transporter activity;3.09298728937129e-07!GO:0016023;cytoplasmic membrane-bound vesicle;3.12214547662913e-07!GO:0006916;anti-apoptosis;3.40998406667452e-07!GO:0031410;cytoplasmic vesicle;3.81101111775144e-07!GO:0051187;cofactor catabolic process;4.08896339574326e-07!GO:0003743;translation initiation factor activity;4.67076231281189e-07!GO:0045333;cellular respiration;4.6915646407183e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.7951358527599e-07!GO:0051789;response to protein stimulus;4.84938308779287e-07!GO:0006986;response to unfolded protein;4.84938308779287e-07!GO:0044262;cellular carbohydrate metabolic process;5.96366160855921e-07!GO:0015980;energy derivation by oxidation of organic compounds;8.5466114309472e-07!GO:0007599;hemostasis;8.934113980239e-07!GO:0009060;aerobic respiration;9.46372899607842e-07!GO:0048518;positive regulation of biological process;9.79325450086883e-07!GO:0017038;protein import;1.05216433343813e-06!GO:0030036;actin cytoskeleton organization and biogenesis;1.08941736495403e-06!GO:0006366;transcription from RNA polymerase II promoter;1.13525126449947e-06!GO:0006512;ubiquitin cycle;1.13525126449947e-06!GO:0007596;blood coagulation;1.17487608058753e-06!GO:0005635;nuclear envelope;1.40663506238237e-06!GO:0031324;negative regulation of cellular metabolic process;1.43755377117039e-06!GO:0003714;transcription corepressor activity;1.52842284650391e-06!GO:0010467;gene expression;1.59818278117124e-06!GO:0006752;group transfer coenzyme metabolic process;1.61208364376169e-06!GO:0006954;inflammatory response;1.61208364376169e-06!GO:0002253;activation of immune response;1.61208364376169e-06!GO:0019899;enzyme binding;1.62173432676378e-06!GO:0000398;nuclear mRNA splicing, via spliceosome;1.7337350397524e-06!GO:0000375;RNA splicing, via transesterification reactions;1.7337350397524e-06!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.7337350397524e-06!GO:0016604;nuclear body;1.77809424709295e-06!GO:0019829;cation-transporting ATPase activity;2.04419857323217e-06!GO:0006694;steroid biosynthetic process;2.28580810172533e-06!GO:0006869;lipid transport;2.36142015152839e-06!GO:0009605;response to external stimulus;2.61560219581846e-06!GO:0006099;tricarboxylic acid cycle;2.62501717888319e-06!GO:0046356;acetyl-CoA catabolic process;2.62501717888319e-06!GO:0042060;wound healing;2.95051442054892e-06!GO:0050817;coagulation;3.01854859460974e-06!GO:0042221;response to chemical stimulus;3.28460235474295e-06!GO:0007243;protein kinase cascade;3.61016010184025e-06!GO:0016607;nuclear speck;3.64934977477485e-06!GO:0030029;actin filament-based process;3.87438657012196e-06!GO:0009109;coenzyme catabolic process;4.30765711877539e-06!GO:0008361;regulation of cell size;4.30765711877539e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.34761919846932e-06!GO:0008092;cytoskeletal protein binding;4.43042321440194e-06!GO:0051188;cofactor biosynthetic process;4.7867017930891e-06!GO:0016469;proton-transporting two-sector ATPase complex;4.84695969268524e-06!GO:0016049;cell growth;5.1602493499524e-06!GO:0008639;small protein conjugating enzyme activity;5.48882852791787e-06!GO:0009892;negative regulation of metabolic process;5.5757702189174e-06!GO:0042802;identical protein binding;5.62145798918389e-06!GO:0031252;leading edge;5.90749503690675e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.91073347713312e-06!GO:0006957;complement activation, alternative pathway;7.21703444701074e-06!GO:0006754;ATP biosynthetic process;7.36049265865031e-06!GO:0006753;nucleoside phosphate metabolic process;7.36049265865031e-06!GO:0004842;ubiquitin-protein ligase activity;7.47994478054524e-06!GO:0015078;hydrogen ion transmembrane transporter activity;7.48728127542792e-06!GO:0046034;ATP metabolic process;7.94981638058173e-06!GO:0005788;endoplasmic reticulum lumen;7.94981638058173e-06!GO:0006084;acetyl-CoA metabolic process;7.95514976544669e-06!GO:0005319;lipid transporter activity;8.78961086240266e-06!GO:0001558;regulation of cell growth;9.32105358194103e-06!GO:0006897;endocytosis;9.46377016112172e-06!GO:0010324;membrane invagination;9.46377016112172e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.0011342701866e-05!GO:0005506;iron ion binding;1.04671435593012e-05!GO:0019439;aromatic compound catabolic process;1.31649842734775e-05!GO:0009142;nucleoside triphosphate biosynthetic process;1.35747796973136e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.35747796973136e-05!GO:0044270;nitrogen compound catabolic process;1.40326365557265e-05!GO:0016064;immunoglobulin mediated immune response;1.46319446519148e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.5827785702337e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.5827785702337e-05!GO:0051170;nuclear import;1.61546394558097e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.71210869183533e-05!GO:0009063;amino acid catabolic process;1.71771955344503e-05!GO:0005770;late endosome;1.9001874625613e-05!GO:0009141;nucleoside triphosphate metabolic process;1.93828632768229e-05!GO:0046983;protein dimerization activity;1.93828632768229e-05!GO:0046483;heterocycle metabolic process;1.95256362936077e-05!GO:0019787;small conjugating protein ligase activity;1.96267609405073e-05!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.01014801549376e-05!GO:0006606;protein import into nucleus;2.11839746700773e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.13429831772496e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.13429831772496e-05!GO:0046930;pore complex;2.27188552375579e-05!GO:0048522;positive regulation of cellular process;2.99831852606721e-05!GO:0000267;cell fraction;3.09271877064654e-05!GO:0005730;nucleolus;3.12503020589335e-05!GO:0003713;transcription coactivator activity;3.16508544358364e-05!GO:0008286;insulin receptor signaling pathway;3.41228102869412e-05!GO:0001666;response to hypoxia;3.65597754406327e-05!GO:0019724;B cell mediated immunity;3.69238493296566e-05!GO:0016126;sterol biosynthetic process;3.83864159560778e-05!GO:0016787;hydrolase activity;3.83976917818492e-05!GO:0009259;ribonucleotide metabolic process;4.0265520623335e-05!GO:0030120;vesicle coat;4.04013605098131e-05!GO:0030662;coated vesicle membrane;4.04013605098131e-05!GO:0048475;coated membrane;4.05068625725956e-05!GO:0030117;membrane coat;4.05068625725956e-05!GO:0017076;purine nucleotide binding;4.19135043562309e-05!GO:0006163;purine nucleotide metabolic process;4.24714313472131e-05!GO:0009310;amine catabolic process;4.72695608210414e-05!GO:0006613;cotranslational protein targeting to membrane;4.91220963702744e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.98927621144626e-05!GO:0001944;vasculature development;5.88356874127975e-05!GO:0009150;purine ribonucleotide metabolic process;7.09141447422419e-05!GO:0009108;coenzyme biosynthetic process;7.24553448741107e-05!GO:0000096;sulfur amino acid metabolic process;7.24553448741107e-05!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;7.38833737761916e-05!GO:0005839;proteasome core complex (sensu Eukaryota);7.49952284557448e-05!GO:0016853;isomerase activity;7.54797572616773e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.66341592063964e-05!GO:0051287;NAD binding;9.47670217772802e-05!GO:0031965;nuclear membrane;9.90476094218664e-05!GO:0006695;cholesterol biosynthetic process;0.000101198735860272!GO:0006006;glucose metabolic process;0.000110289425094092!GO:0001568;blood vessel development;0.000116632962333879!GO:0065008;regulation of biological quality;0.000123605175651719!GO:0043412;biopolymer modification;0.000135439709653284!GO:0005624;membrane fraction;0.000142294134671084!GO:0043228;non-membrane-bound organelle;0.000143989553273713!GO:0043232;intracellular non-membrane-bound organelle;0.000143989553273713!GO:0045259;proton-transporting ATP synthase complex;0.000147692230809001!GO:0005791;rough endoplasmic reticulum;0.000149961991066614!GO:0006793;phosphorus metabolic process;0.000151611604095603!GO:0006796;phosphate metabolic process;0.000151611604095603!GO:0019842;vitamin binding;0.00015309844702486!GO:0003779;actin binding;0.000164348597772001!GO:0006164;purine nucleotide biosynthetic process;0.000174056668303044!GO:0016563;transcription activator activity;0.000184315178664911!GO:0044440;endosomal part;0.00019831626339869!GO:0010008;endosome membrane;0.00019831626339869!GO:0043283;biopolymer metabolic process;0.00019831626339869!GO:0016769;transferase activity, transferring nitrogenous groups;0.0001987959468566!GO:0015918;sterol transport;0.000228834873753137!GO:0030301;cholesterol transport;0.000228834873753137!GO:0008652;amino acid biosynthetic process;0.000237328676361885!GO:0030867;rough endoplasmic reticulum membrane;0.000237328676361885!GO:0006464;protein modification process;0.00024295370236915!GO:0006417;regulation of translation;0.000260449234892076!GO:0009260;ribonucleotide biosynthetic process;0.000281063667260278!GO:0003924;GTPase activity;0.000285929512405627!GO:0019318;hexose metabolic process;0.000285929512405627!GO:0009152;purine ribonucleotide biosynthetic process;0.00028597957203817!GO:0005996;monosaccharide metabolic process;0.000296645169282041!GO:0016481;negative regulation of transcription;0.000296645169282041!GO:0010035;response to inorganic substance;0.000308238281647379!GO:0016887;ATPase activity;0.000310919479204744!GO:0005579;membrane attack complex;0.000345506374031107!GO:0006612;protein targeting to membrane;0.000354168403347427!GO:0044431;Golgi apparatus part;0.000380177958746282!GO:0031326;regulation of cellular biosynthetic process;0.000390743333190232!GO:0050789;regulation of biological process;0.000401676062683862!GO:0016881;acid-amino acid ligase activity;0.000408744013876469!GO:0006508;proteolysis;0.000409296542429805!GO:0050878;regulation of body fluid levels;0.000443733477986259!GO:0004298;threonine endopeptidase activity;0.000443733477986259!GO:0040008;regulation of growth;0.000477904313495751!GO:0009889;regulation of biosynthetic process;0.000481809298080723!GO:0032553;ribonucleotide binding;0.000497439457442957!GO:0032555;purine ribonucleotide binding;0.000497439457442957!GO:0006959;humoral immune response;0.000509404590895162!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000531531209528773!GO:0005975;carbohydrate metabolic process;0.000550689891015365!GO:0007264;small GTPase mediated signal transduction;0.000550689891015365!GO:0005525;GTP binding;0.000554443326209939!GO:0022890;inorganic cation transmembrane transporter activity;0.00058382494760119!GO:0008654;phospholipid biosynthetic process;0.000592482238565006!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000604118854280641!GO:0043687;post-translational protein modification;0.000624548224371761!GO:0045786;negative regulation of progression through cell cycle;0.000643307302238113!GO:0048471;perinuclear region of cytoplasm;0.00065665967259529!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000666707907269108!GO:0000097;sulfur amino acid biosynthetic process;0.000710028882626089!GO:0046394;carboxylic acid biosynthetic process;0.00072085407701077!GO:0016053;organic acid biosynthetic process;0.00072085407701077!GO:0008250;oligosaccharyl transferase complex;0.000824225429858963!GO:0006979;response to oxidative stress;0.000841894469928944!GO:0005798;Golgi-associated vesicle;0.000845902280777532!GO:0030133;transport vesicle;0.000879662287784878!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000881440828988825!GO:0009074;aromatic amino acid family catabolic process;0.000916797351880955!GO:0043566;structure-specific DNA binding;0.000943930783967033!GO:0004857;enzyme inhibitor activity;0.00097693106959515!GO:0032446;protein modification by small protein conjugation;0.00100364870004432!GO:0000245;spliceosome assembly;0.00103018552278487!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00104325087356167!GO:0065007;biological regulation;0.00105840106307096!GO:0030139;endocytic vesicle;0.00107384322927903!GO:0005741;mitochondrial outer membrane;0.001081214376421!GO:0044453;nuclear membrane part;0.00109570862264962!GO:0031968;organelle outer membrane;0.00112713605170319!GO:0010033;response to organic substance;0.00119039117585198!GO:0019867;outer membrane;0.00132561377209727!GO:0016567;protein ubiquitination;0.00135688089220163!GO:0004576;oligosaccharyl transferase activity;0.00137826315057501!GO:0042623;ATPase activity, coupled;0.0015261737190225!GO:0030212;hyaluronan metabolic process;0.00163316299172076!GO:0016705;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;0.00165358673833974!GO:0001726;ruffle;0.00169965629189304!GO:0008206;bile acid metabolic process;0.0017607240328113!GO:0030100;regulation of endocytosis;0.00181634601603328!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00182909958965653!GO:0051920;peroxiredoxin activity;0.00183389511426356!GO:0004364;glutathione transferase activity;0.00183629342756263!GO:0016310;phosphorylation;0.00183629342756263!GO:0009719;response to endogenous stimulus;0.00184703692695569!GO:0001525;angiogenesis;0.00186453749645331!GO:0006643;membrane lipid metabolic process;0.00186453749645331!GO:0019395;fatty acid oxidation;0.00188306854223486!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0020004740769369!GO:0033116;ER-Golgi intermediate compartment membrane;0.00202571924843871!GO:0050794;regulation of cellular process;0.00205771267602672!GO:0006518;peptide metabolic process;0.00206929561381735!GO:0030554;adenyl nucleotide binding;0.0020998465946021!GO:0030532;small nuclear ribonucleoprotein complex;0.00212883295384521!GO:0033673;negative regulation of kinase activity;0.00212916063468055!GO:0006469;negative regulation of protein kinase activity;0.00212916063468055!GO:0048514;blood vessel morphogenesis;0.00212925399902387!GO:0051659;maintenance of mitochondrion localization;0.00213029858200033!GO:0051657;maintenance of organelle localization;0.00213029858200033!GO:0048468;cell development;0.00213105738050597!GO:0016197;endosome transport;0.00220912802542099!GO:0016408;C-acyltransferase activity;0.00230870888782751!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00234003506570717!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.00238353554787801!GO:0045792;negative regulation of cell size;0.00240284892565716!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00240284892565716!GO:0006487;protein amino acid N-linked glycosylation;0.00242959541752166!GO:0006725;aromatic compound metabolic process;0.00250178941080905!GO:0043021;ribonucleoprotein binding;0.00260558705657306!GO:0032561;guanyl ribonucleotide binding;0.00263116193784993!GO:0019001;guanyl nucleotide binding;0.00263116193784993!GO:0005774;vacuolar membrane;0.00264629742184456!GO:0019843;rRNA binding;0.00274903492285597!GO:0008483;transaminase activity;0.00277871322760004!GO:0030308;negative regulation of cell growth;0.00279277786510987!GO:0051427;hormone receptor binding;0.00285382922418954!GO:0019838;growth factor binding;0.00294021500073357!GO:0005885;Arp2/3 protein complex;0.00298920330984298!GO:0050657;nucleic acid transport;0.003005378616175!GO:0051236;establishment of RNA localization;0.003005378616175!GO:0050658;RNA transport;0.003005378616175!GO:0006558;L-phenylalanine metabolic process;0.00317074685625151!GO:0006559;L-phenylalanine catabolic process;0.00317074685625151!GO:0009069;serine family amino acid metabolic process;0.00317074685625151!GO:0006635;fatty acid beta-oxidation;0.00327100137599813!GO:0055088;lipid homeostasis;0.00330459854402851!GO:0051270;regulation of cell motility;0.00332028469254655!GO:0016860;intramolecular oxidoreductase activity;0.00332293983204084!GO:0005159;insulin-like growth factor receptor binding;0.00344010339235183!GO:0005643;nuclear pore;0.00344438186998749!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00344438186998749!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00344438186998749!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00344438186998749!GO:0031960;response to corticosteroid stimulus;0.0034698518334515!GO:0006953;acute-phase response;0.00348837703985367!GO:0005762;mitochondrial large ribosomal subunit;0.00359484804186473!GO:0000315;organellar large ribosomal subunit;0.00359484804186473!GO:0006403;RNA localization;0.00372895084108567!GO:0003690;double-stranded DNA binding;0.0037545979691502!GO:0016829;lyase activity;0.0037566326607574!GO:0045892;negative regulation of transcription, DNA-dependent;0.0037871694115743!GO:0010038;response to metal ion;0.0038054177818482!GO:0030027;lamellipodium;0.0038054177818482!GO:0000151;ubiquitin ligase complex;0.00385780480756596!GO:0044242;cellular lipid catabolic process;0.00393280326193482!GO:0016859;cis-trans isomerase activity;0.00429014125002474!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00439216480798021!GO:0002449;lymphocyte mediated immunity;0.00439544084702583!GO:0009966;regulation of signal transduction;0.00445982166635498!GO:0006693;prostaglandin metabolic process;0.00451855571520019!GO:0006692;prostanoid metabolic process;0.00451855571520019!GO:0051348;negative regulation of transferase activity;0.00454463925783499!GO:0035257;nuclear hormone receptor binding;0.00467694326495799!GO:0000139;Golgi membrane;0.00468146133001633!GO:0003724;RNA helicase activity;0.00478020085393239!GO:0045454;cell redox homeostasis;0.0047993280647527!GO:0018196;peptidyl-asparagine modification;0.00500413733810898!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00500413733810898!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.00506517465545491!GO:0004300;enoyl-CoA hydratase activity;0.00537083648179923!GO:0007005;mitochondrion organization and biogenesis;0.00548628138830255!GO:0002684;positive regulation of immune system process;0.00565860030260707!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00585953187666451!GO:0002250;adaptive immune response;0.00592715652462666!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.00592715652462666!GO:0005577;fibrinogen complex;0.00620252262725298!GO:0006644;phospholipid metabolic process;0.00627598892131901!GO:0016740;transferase activity;0.0064551445951466!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00657947324539667!GO:0009725;response to hormone stimulus;0.00706249476085666!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00706898909400804!GO:0065009;regulation of a molecular function;0.00709946251359662!GO:0030218;erythrocyte differentiation;0.00754336980818144!GO:0051540;metal cluster binding;0.00783432122870037!GO:0051536;iron-sulfur cluster binding;0.00783432122870037!GO:0006790;sulfur metabolic process;0.00788118634238816!GO:0005769;early endosome;0.00800420219678626!GO:0048500;signal recognition particle;0.00810007284754469!GO:0030118;clathrin coat;0.00813634271888163!GO:0051235;maintenance of localization;0.00820150404280587!GO:0005905;coated pit;0.00825374253080085!GO:0003697;single-stranded DNA binding;0.00851233795249572!GO:0050778;positive regulation of immune response;0.00919171010661004!GO:0006650;glycerophospholipid metabolic process;0.00924649869992426!GO:0051087;chaperone binding;0.00930177969100216!GO:0019210;kinase inhibitor activity;0.00930177969100216!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00930177969100216!GO:0004812;aminoacyl-tRNA ligase activity;0.00930177969100216!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00930177969100216!GO:0009967;positive regulation of signal transduction;0.00946773417347671!GO:0051384;response to glucocorticoid stimulus;0.00961214923159277!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00961214923159277!GO:0015399;primary active transmembrane transporter activity;0.00961214923159277!GO:0065002;intracellular protein transport across a membrane;0.0098725191592826!GO:0043623;cellular protein complex assembly;0.00987272282064881!GO:0006879;cellular iron ion homeostasis;0.010052026451469!GO:0055072;iron ion homeostasis;0.010052026451469!GO:0009081;branched chain family amino acid metabolic process;0.010052026451469!GO:0051179;localization;0.0102136688575429!GO:0042157;lipoprotein metabolic process;0.0102397169989504!GO:0008209;androgen metabolic process;0.0103557283290245!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.010458633827516!GO:0030132;clathrin coat of coated pit;0.0105095814231935!GO:0002682;regulation of immune system process;0.010666557151135!GO:0045926;negative regulation of growth;0.0109558236281659!GO:0044437;vacuolar part;0.0110151913656994!GO:0000314;organellar small ribosomal subunit;0.0111229778271691!GO:0005763;mitochondrial small ribosomal subunit;0.0111229778271691!GO:0030134;ER to Golgi transport vesicle;0.0112574244002657!GO:0006767;water-soluble vitamin metabolic process;0.0114093371282745!GO:0002443;leukocyte mediated immunity;0.0117059949044654!GO:0051101;regulation of DNA binding;0.0117157055128143!GO:0051128;regulation of cellular component organization and biogenesis;0.0117157055128143!GO:0050660;FAD binding;0.0119181437342861!GO:0008047;enzyme activator activity;0.0119866548617527!GO:0006525;arginine metabolic process;0.0122174483988261!GO:0007040;lysosome organization and biogenesis;0.0122174483988261!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0123118416343057!GO:0005524;ATP binding;0.0124687565304165!GO:0009991;response to extracellular stimulus;0.0128725192843435!GO:0030041;actin filament polymerization;0.0131646413908124!GO:0040011;locomotion;0.013303004070834!GO:0043038;amino acid activation;0.013303004070834!GO:0006418;tRNA aminoacylation for protein translation;0.013303004070834!GO:0043039;tRNA aminoacylation;0.013303004070834!GO:0005083;small GTPase regulator activity;0.0133219649402555!GO:0030127;COPII vesicle coat;0.0135458369524867!GO:0012507;ER to Golgi transport vesicle membrane;0.0135458369524867!GO:0051252;regulation of RNA metabolic process;0.0136239153375868!GO:0004860;protein kinase inhibitor activity;0.0136845954955533!GO:0051248;negative regulation of protein metabolic process;0.0138153687962963!GO:0040012;regulation of locomotion;0.0140603339450514!GO:0032559;adenyl ribonucleotide binding;0.0145034588730701!GO:0002252;immune effector process;0.0145355970790357!GO:0009117;nucleotide metabolic process;0.0145997945177297!GO:0015036;disulfide oxidoreductase activity;0.0146609758737128!GO:0005667;transcription factor complex;0.0146952281757446!GO:0006572;tyrosine catabolic process;0.014701009436804!GO:0008154;actin polymerization and/or depolymerization;0.01499827297493!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.015099242739623!GO:0045047;protein targeting to ER;0.015099242739623!GO:0043492;ATPase activity, coupled to movement of substances;0.015325104140855!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0153716211640741!GO:0015002;heme-copper terminal oxidase activity;0.0153716211640741!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0153716211640741!GO:0004129;cytochrome-c oxidase activity;0.0153716211640741!GO:0043284;biopolymer biosynthetic process;0.0153716211640741!GO:0006706;steroid catabolic process;0.0155839766025483!GO:0031589;cell-substrate adhesion;0.0156819928552587!GO:0031667;response to nutrient levels;0.0157684333490396!GO:0005765;lysosomal membrane;0.0158339325145785!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.015924115760296!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0162049269964072!GO:0016791;phosphoric monoester hydrolase activity;0.0162049269964072!GO:0055092;sterol homeostasis;0.0164787952016556!GO:0042632;cholesterol homeostasis;0.0164787952016556!GO:0045893;positive regulation of transcription, DNA-dependent;0.0165990621936419!GO:0004177;aminopeptidase activity;0.0167040456159107!GO:0007050;cell cycle arrest;0.0169268255931579!GO:0008186;RNA-dependent ATPase activity;0.0169268255931579!GO:0030170;pyridoxal phosphate binding;0.0169327883616943!GO:0006259;DNA metabolic process;0.0170099966504355!GO:0006633;fatty acid biosynthetic process;0.0170921206276471!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0173938152767486!GO:0007265;Ras protein signal transduction;0.017515322718679!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0175529353144701!GO:0051028;mRNA transport;0.0175995762655424!GO:0046364;monosaccharide biosynthetic process;0.0185213811334391!GO:0046165;alcohol biosynthetic process;0.0185213811334391!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.018570388753903!GO:0035258;steroid hormone receptor binding;0.0185952842048151!GO:0051674;localization of cell;0.0186628838204862!GO:0006928;cell motility;0.0186628838204862!GO:0043488;regulation of mRNA stability;0.0186973021123568!GO:0043487;regulation of RNA stability;0.0186973021123568!GO:0031072;heat shock protein binding;0.0188553882333598!GO:0000074;regulation of progression through cell cycle;0.0190779866405784!GO:0017166;vinculin binding;0.0192382406690733!GO:0006702;androgen biosynthetic process;0.0192387938950695!GO:0051726;regulation of cell cycle;0.0192387938950695!GO:0048659;smooth muscle cell proliferation;0.0192399917073786!GO:0006778;porphyrin metabolic process;0.0194022927521873!GO:0033013;tetrapyrrole metabolic process;0.0194022927521873!GO:0051591;response to cAMP;0.019631285222829!GO:0051168;nuclear export;0.019960615233976!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0204596339798453!GO:0050811;GABA receptor binding;0.020845450764561!GO:0016709;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen;0.0209421995337807!GO:0006402;mRNA catabolic process;0.0214691238975259!GO:0007162;negative regulation of cell adhesion;0.0215254193046965!GO:0008201;heparin binding;0.0216615832517541!GO:0001887;selenium metabolic process;0.021667246780369!GO:0042627;chylomicron;0.0216990083292611!GO:0031327;negative regulation of cellular biosynthetic process;0.0217222378176919!GO:0016712;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen;0.0217617331424088!GO:0005520;insulin-like growth factor binding;0.0221639347970595!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0222990133507016!GO:0030658;transport vesicle membrane;0.0226988689338131!GO:0015923;mannosidase activity;0.0228398795039155!GO:0008026;ATP-dependent helicase activity;0.022906084211644!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0231994094662253!GO:0043681;protein import into mitochondrion;0.0232769873929283!GO:0042803;protein homodimerization activity;0.0239542350324993!GO:0048487;beta-tubulin binding;0.0239814234787019!GO:0042026;protein refolding;0.0241014683322376!GO:0007033;vacuole organization and biogenesis;0.0241781116599259!GO:0043065;positive regulation of apoptosis;0.0242392915796742!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0242392915796742!GO:0003746;translation elongation factor activity;0.024483024948591!GO:0009066;aspartate family amino acid metabolic process;0.0246135550047556!GO:0045637;regulation of myeloid cell differentiation;0.0246705998003861!GO:0019904;protein domain specific binding;0.0248848722495216!GO:0050776;regulation of immune response;0.0249186494067095!GO:0008312;7S RNA binding;0.0249393282867836!GO:0016836;hydro-lyase activity;0.025550088727795!GO:0030193;regulation of blood coagulation;0.026398106455112!GO:0050749;apolipoprotein E receptor binding;0.0264963492640664!GO:0004197;cysteine-type endopeptidase activity;0.0264963492640664!GO:0007160;cell-matrix adhesion;0.0265059200790661!GO:0003729;mRNA binding;0.0267075123802626!GO:0000041;transition metal ion transport;0.0267115992083533!GO:0046467;membrane lipid biosynthetic process;0.0268486791087885!GO:0030518;steroid hormone receptor signaling pathway;0.026918745027006!GO:0006090;pyruvate metabolic process;0.0270333878077421!GO:0005048;signal sequence binding;0.0270716058819878!GO:0030119;AP-type membrane coat adaptor complex;0.0271471445734578!GO:0050748;negative regulation of lipoprotein metabolic process;0.0274031696789752!GO:0008234;cysteine-type peptidase activity;0.0278568481323588!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0280940596816695!GO:0046904;calcium oxalate binding;0.0285753928063461!GO:0030568;plasmin inhibitor activity;0.0285753928063461!GO:0031902;late endosome membrane;0.0287902515765401!GO:0042168;heme metabolic process;0.0294018446037128!GO:0048646;anatomical structure formation;0.0294212535521512!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0295344220296051!GO:0016877;ligase activity, forming carbon-sulfur bonds;0.0297075968078685!GO:0006607;NLS-bearing substrate import into nucleus;0.0297291981038396!GO:0019319;hexose biosynthetic process;0.0301487307118069!GO:0007242;intracellular signaling cascade;0.0306257259836893!GO:0015682;ferric iron transport;0.0307232265506591!GO:0015091;ferric iron transmembrane transporter activity;0.0307232265506591!GO:0031643;positive regulation of myelination;0.0307232265506591!GO:0006081;aldehyde metabolic process;0.030970272695179!GO:0033344;cholesterol efflux;0.0313845281247535!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0316628023566262!GO:0003995;acyl-CoA dehydrogenase activity;0.0317353672132285!GO:0030131;clathrin adaptor complex;0.0317473707819535!GO:0006414;translational elongation;0.0319569168329586!GO:0051346;negative regulation of hydrolase activity;0.0320481480659295!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0324271180221146!GO:0051098;regulation of binding;0.0324635032672969!GO:0007010;cytoskeleton organization and biogenesis;0.0336479644612507!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0338870904215323!GO:0043068;positive regulation of programmed cell death;0.0349239500875443!GO:0051539;4 iron, 4 sulfur cluster binding;0.0349239500875443!GO:0005938;cell cortex;0.0353406052325334!GO:0006595;polyamine metabolic process;0.0359213283350478!GO:0003702;RNA polymerase II transcription factor activity;0.0363266883432793!GO:0046686;response to cadmium ion;0.0368899312838371!GO:0016746;transferase activity, transferring acyl groups;0.0370372767351477!GO:0030176;integral to endoplasmic reticulum membrane;0.0370372767351477!GO:0016229;steroid dehydrogenase activity;0.0372264268863341!GO:0003756;protein disulfide isomerase activity;0.0372264268863341!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0372264268863341!GO:0004004;ATP-dependent RNA helicase activity;0.0373538890992796!GO:0001889;liver development;0.0375718680985454!GO:0030155;regulation of cell adhesion;0.0377171413194423!GO:0004386;helicase activity;0.0377588704506311!GO:0042254;ribosome biogenesis and assembly;0.0379847917564792!GO:0046395;carboxylic acid catabolic process;0.0382389703845013!GO:0016054;organic acid catabolic process;0.0382389703845013!GO:0030569;chymotrypsin inhibitor activity;0.0382389703845013!GO:0051271;negative regulation of cell motility;0.0385710421964322!GO:0006749;glutathione metabolic process;0.0385899290377601!GO:0043433;negative regulation of transcription factor activity;0.0392364433918146!GO:0030695;GTPase regulator activity;0.0392533632788218!GO:0006509;membrane protein ectodomain proteolysis;0.0392974209725094!GO:0033619;membrane protein proteolysis;0.0392974209725094!GO:0051537;2 iron, 2 sulfur cluster binding;0.0394483176792962!GO:0050818;regulation of coagulation;0.0396279502216662!GO:0000050;urea cycle;0.0397373600771518!GO:0043603;amide metabolic process;0.0397373600771518!GO:0019627;urea metabolic process;0.0397373600771518!GO:0008430;selenium binding;0.0398489317396233!GO:0009890;negative regulation of biosynthetic process;0.0399722424392336!GO:0051049;regulation of transport;0.0400419207346681!GO:0016747;transferase activity, transferring groups other than amino-acyl groups;0.0400419207346681!GO:0008139;nuclear localization sequence binding;0.0401092046654037!GO:0006892;post-Golgi vesicle-mediated transport;0.0404258360198008!GO:0000060;protein import into nucleus, translocation;0.0404258360198008!GO:0007049;cell cycle;0.0406208370173933!GO:0043086;negative regulation of catalytic activity;0.0411702618689316!GO:0004185;serine carboxypeptidase activity;0.0411898705182891!GO:0006007;glucose catabolic process;0.0422575901058419!GO:0006818;hydrogen transport;0.0424795401328847!GO:0006891;intra-Golgi vesicle-mediated transport;0.0426133233971517!GO:0004563;beta-N-acetylhexosaminidase activity;0.0428053179952504!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0428053179952504!GO:0001725;stress fiber;0.0428192404090304!GO:0032432;actin filament bundle;0.0428192404090304!GO:0045941;positive regulation of transcription;0.0436002069855221!GO:0009607;response to biotic stimulus;0.0436506174312004!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0436506174312004!GO:0004784;superoxide dismutase activity;0.0436506174312004!GO:0009064;glutamine family amino acid metabolic process;0.0441804415447683!GO:0006094;gluconeogenesis;0.0443882411289805!GO:0015629;actin cytoskeleton;0.0443882411289805!GO:0035035;histone acetyltransferase binding;0.0445458242138249!GO:0042558;pteridine and derivative metabolic process;0.0458276738991501!GO:0008283;cell proliferation;0.045835457091076!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0458462274233892!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0458462274233892!GO:0008147;structural constituent of bone;0.0458462274233892!GO:0007034;vacuolar transport;0.0458462274233892!GO:0006534;cysteine metabolic process;0.0460164651867364!GO:0030663;COPI coated vesicle membrane;0.0462240127059657!GO:0030126;COPI vesicle coat;0.0462240127059657!GO:0016568;chromatin modification;0.0478446925167803!GO:0030235;nitric-oxide synthase regulator activity;0.0480892539850115!GO:0005099;Ras GTPase activator activity;0.048264283067253!GO:0000062;acyl-CoA binding;0.0483957482061263!GO:0006658;phosphatidylserine metabolic process;0.0485599444973393!GO:0044438;microbody part;0.0485599444973393!GO:0044439;peroxisomal part;0.0485599444973393!GO:0005096;GTPase activator activity;0.0492743998656328!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0495414244425057!GO:0006642;triacylglycerol mobilization;0.0496589872155483!GO:0045646;regulation of erythrocyte differentiation;0.0497520198885502!GO:0006563;L-serine metabolic process;0.0498809862106637
|sample_id=10002
|sample_note=
|sample_sex=mixed
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=unclassifiable
|top_motifs=HNF4A_NR2F1,2:6.21804377869;HNF1A:6.21275889448;FOXA2:6.2004898985;RXR{A,B,G}_{NR1H2,PPAR}dimers:4.61606382812;FOX{F1,F2,J1}:3.94650999122;FOX{D1,D2}:3.51357698701;TBP:2.87091753166;STAT2,4,6:2.83325821388;NR6A1:2.59305785529;FOXO1,3,4:2.3532206336;TFCP2:2.18113902257;AR:2.13453011972;SP1:2.08167805202;FOX{I1,J2}:2.0385165602;HSF1,2:2.01660916277;MAZ:1.84768747424;EP300:1.64118403973;BPTF:1.58755452614;TLX2:1.55040104018;HBP1_HMGB_SSRP1_UBTF:1.49881770061;HLF:1.44082965242;CUX2:1.38791967184;GATA6:1.38619668458;NR1H4:1.37096408957;NFATC1..3:1.3322727215;STAT1,3:1.32181344723;PPARG:1.31457599408;PATZ1:1.30624296726;NFIL3:1.2548520317;FOXD3:1.20942490696;TLX1..3_NFIC{dimer}:1.20498146951;FOXQ1:1.18110254918;NKX3-2:1.07198559647;MTF1:1.06503650419;EVI1:1.04792387164;ALX1:0.942206155225;SNAI1..3:0.940919688786;ZNF423:0.935685383117;MED-1{core}:0.92227569598;CEBPA,B_DDIT3:0.92179247641;PDX1:0.880371593284;SREBF1,2:0.878118200659;GZF1:0.85286119814;XCPE1{core}:0.850919108504;HIC1:0.841248559748;POU6F1:0.839217915369;MYOD1:0.825226700133;SMAD1..7,9:0.803095778255;GFI1:0.789560394443;TFAP2{A,C}:0.767121897224;ZEB1:0.7650632277;IRF1,2:0.738557554591;PAX6:0.724140894151;IRF7:0.72149244762;GTF2I:0.719673260684;ZNF238:0.710832192053;GCM1,2:0.710246520968;SOX5:0.688827574338;TEAD1:0.660820867101;SRF:0.654274141512;FOXP1:0.611719733001;MYBL2:0.604549798896;MYFfamily:0.586771279135;TGIF1:0.574883303842;PAX1,9:0.555538785998;MTE{core}:0.486631093689;ADNP_IRX_SIX_ZHX:0.463744599834;ZNF148:0.447616459824;T:0.428935028804;ARID5B:0.426541936717;EBF1:0.423248300523;TBX4,5:0.415957239568;HMX1:0.398501006096;ETS1,2:0.34735463954;NFIX:0.341026648663;TOPORS:0.339290345515;ALX4:0.317783300241;TFAP4:0.31421645498;IKZF1:0.308563286981;MAFB:0.293992371036;ESR1:0.287004745956;MEF2{A,B,C,D}:0.279711791321;MZF1:0.261040850301;bHLH_family:0.255968099533;FOXP3:0.255131452857;ATF6:0.253321341544;HOX{A4,D4}:0.250122714874;HOX{A6,A7,B6,B7}:0.229036991334;RORA:0.226154536915;TFAP2B:0.210638285313;EGR1..3:0.189664838337;FOXL1:0.180639281307;PAX5:0.167922135629;RXR{A,B,G}:0.158158444107;GTF2A1,2:0.122137694553;FOXN1:0.0970718266306;ELF1,2,4:0.0915807734412;NKX2-1,4:0.0889386643392;ATF4:0.0726410999125;EN1,2:0.0416616609964;ATF2:0.0388681218208;GATA4:0.018527429474;AIRE:0.0131471294117;SPI1:-0.0140951517618;VSX1,2:-0.0146996759915;HAND1,2:-0.0173524041895;SPIB:-0.01805364585;ZFP161:-0.0204961966739;NFY{A,B,C}:-0.0374753044023;DBP:-0.0448415966886;KLF4:-0.0663503393992;NHLH1,2:-0.0684436671947;POU2F1..3:-0.0909459555682;PRDM1:-0.0931442169742;FOXM1:-0.116414373115;LMO2:-0.143994076124;SOX{8,9,10}:-0.146763218226;NFE2L1:-0.162308456094;JUN:-0.189689011771;NR3C1:-0.201533679175;NANOG:-0.220199552494;RREB1:-0.229903834237;NR5A1,2:-0.236288393014;DMAP1_NCOR{1,2}_SMARC:-0.262884622999;GFI1B:-0.270589242899;RBPJ:-0.284675840356;ZNF143:-0.308646109636;TAL1_TCF{3,4,12}:-0.388783040681;GLI1..3:-0.394899692255;TEF:-0.407253961874;TP53:-0.412293323938;ATF5_CREB3:-0.415395599778;PBX1:-0.436504347198;FOSL2:-0.437593554873;NFKB1_REL_RELA:-0.454507698474;PAX2:-0.46225849777;SOX17:-0.463639282509;STAT5{A,B}:-0.49124524344;PITX1..3:-0.495632038611;IKZF2:-0.504884924131;RXRA_VDR{dimer}:-0.507914702127;NFE2:-0.532988121277;BREu{core}:-0.53657703741;HMGA1,2:-0.536845421939;CDC5L:-0.55332496478;HIF1A:-0.555944077866;NRF1:-0.573052656927;NFE2L2:-0.575157154362;RFX2..5_RFXANK_RFXAP:-0.590583263334;REST:-0.593874249728;PRRX1,2:-0.652771883904;ZIC1..3:-0.658142050297;NANOG{mouse}:-0.672440140931;UFEwm:-0.688003270899;LEF1_TCF7_TCF7L1,2:-0.688920137156;ZBTB16:-0.70093929801;RUNX1..3:-0.704190790935;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.711931155474;HES1:-0.71734562749;AHR_ARNT_ARNT2:-0.732608424398;HOX{A5,B5}:-0.742848538749;RFX1:-0.762593657542;ZBTB6:-0.791553666833;SOX2:-0.800190393226;POU1F1:-0.813682951599;CDX1,2,4:-0.837059162692;BACH2:-0.849566633815;NKX2-2,8:-0.852297827181;FOS_FOS{B,L1}_JUN{B,D}:-0.861239157431;E2F1..5:-0.889145770484;NKX2-3_NKX2-5:-1.00936437601;POU5F1:-1.09913293305;CREB1:-1.10506809291;POU3F1..4:-1.10755139856;ESRRA:-1.11030882241;SPZ1:-1.12482532013;NKX3-1:-1.12807968833;XBP1:-1.19175543432;YY1:-1.21510458432;ONECUT1,2:-1.2542154833;TFDP1:-1.33940705988;PAX4:-1.3878796245;HOXA9_MEIS1:-1.38914782347;OCT4_SOX2{dimer}:-1.39390147519;MYB:-1.41484243692;PAX3,7:-1.45335274136;ELK1,4_GABP{A,B1}:-1.47747998076;ZNF384:-1.51891937521;CRX:-1.59562412592;LHX3,4:-1.70357506448;NKX6-1,2:-1.94806170412;PAX8:-2.29758660019
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10002-101A5;search_select_hide=table117:FF:10002-101A5
}}
}}

Latest revision as of 12:12, 3 June 2020

Name:SABiosciences XpressRef Human Universal Total RNA, pool1
Species:Human (Homo sapiens)
Library ID:CNhs10610
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueunclassifiable
dev stageUNDEFINED
sexmixed
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companySABiosciences
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberB208251
catalog numberCat:GA-004
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005009
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10610 CAGE DRX008610 DRR009482
Accession ID Hg19

Library idBAMCTSS
CNhs10610 DRZ000907 DRZ002292
Accession ID Hg38

Library idBAMCTSS
CNhs10610 DRZ012257 DRZ013642
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload
HumanCAGEScan Download raw sequence, BAM & CTSS

Library id3prime-FASTQ5prime-FASTQBAMCTSS
NCig10013downloaddownloaddownloaddownload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0104
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.0426
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.242
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.236
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0426
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0.528
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.0426
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0.18
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen4.841339e-4
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.435
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.0426
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.0814
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0697
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0.0814
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.406
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0983
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.212
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.0426
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.252
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.18
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0.0426
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0426
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0.0426
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.0426
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.174
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0.709
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.317
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0.0718
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0216
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.0426
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.0426
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.18
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0.0426
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0.0213
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.636
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.0426
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.309
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.28
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0814
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.117
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0551
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0.0814
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.0426
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-8.587893e-4
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.0426
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0426
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0.0426
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.0426
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.414
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0426
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.369
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.285
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0.0426
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0.0426
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.0175
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.0814
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.369
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0232
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.033
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.129
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.163
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0.0426
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0.553
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0.0426
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0.654
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0.18
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0.0426
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.15
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.0426
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.0426
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.18
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.0426
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.239
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0.0814
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0.0426
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0.236
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.0426
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10610

Jaspar motifP-value
MA0002.20.0661
MA0003.10.0446
MA0004.10.49
MA0006.10.0559
MA0007.10.128
MA0009.10.263
MA0014.10.643
MA0017.11.75288e-21
MA0018.20.207
MA0019.10.299
MA0024.10.0243
MA0025.10.0205
MA0027.10.549
MA0028.11.61278e-5
MA0029.10.915
MA0030.17.56008e-10
MA0031.18.37094e-10
MA0035.20.00481
MA0038.10.172
MA0039.20.0313
MA0040.10.15
MA0041.10.496
MA0042.10.463
MA0043.10.39
MA0046.17.69722e-78
MA0047.26.57631e-13
MA0048.10.0543
MA0050.10.0727
MA0051.10.365
MA0052.10.866
MA0055.10.14
MA0057.10.681
MA0058.10.447
MA0059.10.145
MA0060.10.454
MA0061.19.92051e-4
MA0062.22.31936e-8
MA0065.24.65912e-6
MA0066.10.911
MA0067.10.0331
MA0068.13.12494e-4
MA0069.10.414
MA0070.10.23
MA0071.10.628
MA0072.10.276
MA0073.10.746
MA0074.10.773
MA0076.18.36124e-6
MA0077.10.238
MA0078.10.0506
MA0079.20.145
MA0080.20.651
MA0081.10.0955
MA0083.10.673
MA0084.10.615
MA0087.10.183
MA0088.10.136
MA0090.10.00534
MA0091.10.642
MA0092.10.59
MA0093.10.479
MA0099.24.02614e-14
MA0100.10.0872
MA0101.10.00331
MA0102.20.0358
MA0103.10.111
MA0104.20.00751
MA0105.11.87939e-4
MA0106.10.586
MA0107.10.00211
MA0108.24.85909e-17
MA0111.10.853
MA0112.20.0405
MA0113.10.0124
MA0114.13.27221e-24
MA0115.17.23648e-6
MA0116.10.564
MA0117.10.229
MA0119.10.463
MA0122.10.646
MA0124.10.267
MA0125.10.151
MA0131.10.345
MA0135.10.57
MA0136.10.122
MA0137.24.05941e-5
MA0138.20.631
MA0139.10.706
MA0140.10.296
MA0141.10.0082
MA0142.10.621
MA0143.10.648
MA0144.13.12984e-4
MA0145.10.0194
MA0146.10.453
MA0147.10.00196
MA0148.14.64784e-9
MA0149.10.025
MA0150.10.0128
MA0152.10.00547
MA0153.19.55727e-44
MA0154.10.518
MA0155.10.297
MA0156.10.0534
MA0157.16.78354e-4
MA0159.10.00882
MA0160.10.0451
MA0162.10.685
MA0163.10.0319
MA0164.10.2
MA0258.10.177
MA0259.10.0167



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10610

Novel motifP-value
10.548
100.128
1000.874
1010.71
1020.0159
1030.635
1040.964
1050.605
1060.227
1070.042
1080.878
1090.572
110.798
1100.67
1110.0234
1120.341
1130.081
1140.447
1150.988
1160.622
1170.0937
1180.631
1190.409
120.52
1200.398
1210.674
1220.927
1230.39
1240.435
1250.0634
1260.239
1270.0185
1280.692
1290.899
130.567
1300.487
1310.0467
1320.304
1330.357
1340.27
1350.17
1360.632
1370.712
1380.58
1390.285
140.497
1400.738
1410.628
1420.959
1430.00244
1440.124
1450.47
1460.0308
1470.943
1480.796
1490.414
150.545
1500.864
1510.493
1520.114
1530.79
1540.211
1550.603
1560.605
1570.906
1580.4
1590.526
160.613
1600.667
1610.986
1620.972
1630.969
1640.27
1650.0169
1660.719
1670.0923
1680.353
1690.124
170.814
180.016
190.0256
20.0545
200.223
210.269
220.171
230.11
240.897
250.618
260.83
270.621
280.752
290.0831
30.857
300.0432
310.727
320.825
330.542
340.161
350.419
360.143
370.743
380.685
390.115
40.0559
400.919
410.0236
420.907
430.984
440.581
450.0548
460.493
470.592
480.814
490.912
50.953
500.275
510.803
520.0638
530.714
540.755
550.809
560.671
570.175
580.64
590.499
60.34
600.214
610.431
620.959
630.441
640.749
650.567
660.0925
670.128
680.186
690.428
70.415
700.243
710.601
720.403
730.577
740.418
750.0802
760.0106
770.00569
780.505
790.448
80.916
800.116
810.419
820.839
830.743
840.751
850.419
860.991
870.324
880.405
890.783
90.327
900.617
910.475
920.67
930.983
940.0652
950.188
960.849
970.218
980.35
990.142



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10610


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000004 (tissue sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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