FF:10068-101I5: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@ | |DRA_sample_Accession=CAGE@SAMD00005829 | ||
|accession_numbers=CAGE;DRX008679;DRR009551;DRZ000976;DRZ002361 | |accession_numbers=CAGE;DRX008679;DRR009551;DRZ000976;DRZ002361;DRZ012326;DRZ013711 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002048,UBERON:0002100,UBERON:0000479,UBERON:0004119,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0005178,UBERON:0005177,UBERON:0000117,UBERON:0000171,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0000065,UBERON:0000170,UBERON:0001004,UBERON:0002224,UBERON:0000915 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002048,UBERON:0002100,UBERON:0000479,UBERON:0004119,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0005178,UBERON:0005177,UBERON:0000117,UBERON:0000171,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0000065,UBERON:0000170,UBERON:0001004,UBERON:0002224,UBERON:0000915 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!2.96!916.03!TCF21;;chr19:46801639..46801699,+!p1@HIF3A!2.44!273.38!HIF3A;;chr11:34642612..34642646,+!p1@EHF!2.36!226.22!EHF;;chr8:10588010..10588030,-!p1@SOX7!2.29!194.93!SOX7;;chr4:57547454..57547469,-!p1@HOPX!2.22!165.85!HOPX;;chr7:15726296..15726315,-!p1@MEOX2!2.15!141.01!MEOX2;;chr19:46800289..46800327,+!p2@HIF3A!2.07!116.65!HIF3A;;chr13:72441315..72441454,-!p1@DACH1!2.05!217.73!DACH1;;chr1:201979743..201979762,+!p1@ELF3!2.02!102.65!ELF3;;chr7:15726243..15726293,-!p2@MEOX2!1.95!87.56!MEOX2;;chr1:201979703..201979721,+!p2@ELF3!1.94!85.36!ELF3;;chr16:86544113..86544145,+!p1@FOXF1!1.93!102.18!FOXF1;;chr12:52445218..52445237,+!p1@NR4A1!1.92!966.81!NR4A1;;chr11:113930425..113930471,+!p1@ZBTB16!1.92!116.49!ZBTB16;;chr17:59529743..59529798,+!p1@TBX4!1.90!78.60!TBX4;;chr3:169381420..169381535,-!p1@MECOM!1.88!87.56!MECOM;;chr17:74137321..74137337,-!p1@FOXJ1!1.79!61.31!FOXJ1;;chr1:40105299..40105326,-!p1@HEYL!1.77!58.48!HEYL;;chr2:145277882..145277967,-!p3@ZEB2!1.71!85.52!ZEB2;;chr21:39870339..39870443,-!p1@ERG!1.70!49.52!ERG;;chr2:68592406..68592424,+!p1@PLEK!1.70!48.89!PLEK;;chr13:72441074..72441172,-!p2@DACH1!1.69!47.79!DACH1;;chr11:113930401..113930422,+!p3@ZBTB16!1.68!46.85!ZBTB16;;chr15:57511609..57511651,+!p2@TCF12!1.66!74.20!TCF12;;chr2:180427261..180427297,-!p6@ZNF385B!1.63!41.97!ZNF385B;;chr15:42749722..42749739,-!p2@ZFP106!1.60!68.07!ZFP106;;chrY:21906594..21906622,-!p1@KDM5D!1.60!38.36!KDM5D;;chr5:88178983..88179012,-!p1@MEF2C!1.56!262.22!MEF2C;;chr9:14314131..14314147,-!p2@NFIB!1.56!189.43!NFIB;;chr12:52437488..52437507,+!p2@NR4A1!1.56!35.69!NR4A1;;chr5:92918919..92918942,+!p1@NR2F1!1.54!143.68!NR2F1;;chr7:14029283..14029311,-!p1@ETV1!1.53!168.21!ETV1;;chr13:72441506..72441562,-!p3@DACH1!1.53!32.54!DACH1;;chr5:71803177..71803255,-!p1@ZNF366!1.51!31.28!ZNF366;;chr2:180427304..180427323,-!p7@ZNF385B!1.48!28.93!ZNF385B;;chr17:59477233..59477263,+!p1@TBX2!1.46!83.32!TBX2;;chr5:122424918..122424944,+!p1@PRDM6!1.45!27.35!PRDM6;;chr12:54694653..54694672,-!p2@NFE2!1.45!26.88!NFE2;;chr17:59477197..59477212,+!p2@TBX2!1.43!44.49!TBX2;;chr11:113930291..113930339,+!p2@ZBTB16!1.41!40.24!ZBTB16;;chr8:80679993..80680011,-!p1@HEY1!1.41!35.69!HEY1;;chr8:55370487..55370503,+!p1@SOX17!1.41!25.00!SOX17;;chr20:62680984..62680999,-!p1@SOX18!1.40!31.76!SOX18;;chr6:19837592..19837621,+!p1@ID4!1.39!138.18!ID4;;chr11:61520075..61520136,+!p1@C11orf9!1.39!49.52!C11orf9;;chr19:45971246..45971265,+!p1@FOSB!1.38!412.66!FOSB;;chr2:19558373..19558392,-!p1@OSR1!1.38!61.62!OSR1;;chr8:48650715..48650735,-!p1@CEBPD!1.37!2765.54!CEBPD;;chr6:126240442..126240459,+!p4@NCOA7!1.37!28.77!NCOA7;;chr2:46524537..46524553,+!p1@EPAS1!1.36!2060.79!EPAS1;;chr9:3525727..3525828,-!p2@RFX3!1.36!55.18!RFX3;;chr10:51572339..51572376,+!p4@NCOA4!1.36!48.58!NCOA4;;chr9:102584159..102584174,+!p2@NR4A3!1.36!38.99!NR4A3;;chr14:38064429..38064486,-!p1@FOXA1!1.36!22.01!FOXA1;;chr2:100721881..100721904,-!p6@AFF3!1.34!20.91!AFF3;;chr6:168294352..168294371,+!p6@MLLT4!1.34!20.75!MLLT4;;chr6:126240380..126240430,+!p2@NCOA7!1.32!50.62!NCOA7;;chr12:114843852..114843867,-!p3@TBX5!1.32!20.12!TBX5;;chr12:114843940..114843955,-!p2@TBX5!1.32!20.12!TBX5;;chr3:114819124..114819200,-!p3@ZBTB20!1.31!44.80!ZBTB20;;chr2:46524897..46524911,+!p2@EPAS1!1.30!52.66!EPAS1;;chr7:14028488..14028516,-!p2@ETV1!1.30!20.75!ETV1;;chr5:122424955..122424988,+!p2@PRDM6!1.30!19.18!PRDM6;;chr10:51572408..51572454,+!p3@NCOA4!1.29!105.80!NCOA4;;chr7:113726357..113726443,+!p1@FOXP2!1.29!31.44!FOXP2;;chr17:6926362..6926377,+!p1@BCL6B!1.29!18.71!BCL6B;;chr14:36989427..36989442,-!p1@NKX2-1!1.29!18.39!NKX2-1;;chr13:73633131..73633149,+!p1@KLF5!1.28!185.97!KLF5;;chr7:15726220..15726236,-!p4@MEOX2!1.28!18.08!MEOX2;;chr18:19749541..19749557,+!p1@GATA6!1.27!54.39!GATA6;;chr12:115122318..115122331,-!p2@TBX3!1.27!17.45!TBX3;;chr16:54320617..54320643,-!p3@IRX3!1.26!22.01!IRX3;;chr14:74256787..74256858,-!p6@C14orf43!1.26!17.29!C14orf43;;chr7:15726176..15726191,-!p3@MEOX2!1.26!17.29!MEOX2;;chr4:149363494..149363543,-!p1@NR3C2!1.25!16.66!NR3C2;;chr7:14028743..14028799,-!p3@ETV1!1.24!20.59!ETV1;;chr11:47400078..47400106,-!p1@SPI1!1.24!16.19!SPI1;;chr8:106330656..106330684,+!p1@ZFPM2!1.23!41.97!ZFPM2;;chr1:61548374..61548415,+!p4@NFIA!1.23!29.55!NFIA;;chr5:92919100..92919135,+!p3@NR2F1!1.23!19.18!NR2F1;;chr2:180610565..180610578,-!p9@ZNF385B!1.23!16.03!ZNF385B;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.22!15.56!PEG3;;chr9:102584262..102584276,+!p1@NR4A3!1.21!34.11!NR4A3;;chr1:151804244..151804310,-!p1@RORC!1.21!15.25!RORC;;chr3:25469815..25469866,+!p3@RARB!1.21!15.09!RARB;;chr12:96588368..96588394,+!p3@ELK3!1.20!39.46!ELK3;;chr16:54320646..54320672,-!p2@IRX3!1.20!22.48!IRX3;;chr17:53342311..53342400,+!p1@HLF!1.20!17.14!HLF;;chr11:34642656..34642667,+!p2@EHF!1.20!14.93!EHF;;chr10:63809013..63809041,+!p3@ARID5B!1.19!79.86!ARID5B;;chr15:60884706..60884743,-!p1@RORA!1.19!74.67!RORA;;chr5:92918894..92918912,+!p2@NR2F1!1.19!47.00!NR2F1;;chr18:77155922..77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| |expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!2.96!916.03!TCF21;;chr19:46801639..46801699,+!p1@HIF3A!2.44!273.38!HIF3A;;chr11:34642612..34642646,+!p1@EHF!2.36!226.22!EHF;;chr8:10588010..10588030,-!p1@SOX7!2.29!194.93!SOX7;;chr4:57547454..57547469,-!p1@HOPX!2.22!165.85!HOPX;;chr7:15726296..15726315,-!p1@MEOX2!2.15!141.01!MEOX2;;chr19:46800289..46800327,+!p2@HIF3A!2.07!116.65!HIF3A;;chr13:72441315..72441454,-!p1@DACH1!2.05!217.73!DACH1;;chr1:201979743..201979762,+!p1@ELF3!2.02!102.65!ELF3;;chr7:15726243..15726293,-!p2@MEOX2!1.95!87.56!MEOX2;;chr1:201979703..201979721,+!p2@ELF3!1.94!85.36!ELF3;;chr16:86544113..86544145,+!p1@FOXF1!1.93!102.18!FOXF1;;chr12:52445218..52445237,+!p1@NR4A1!1.92!966.81!NR4A1;;chr11:113930425..113930471,+!p1@ZBTB16!1.92!116.49!ZBTB16;;chr17:59529743..59529798,+!p1@TBX4!1.90!78.60!TBX4;;chr3:169381420..169381535,-!p1@MECOM!1.88!87.56!MECOM;;chr17:74137321..74137337,-!p1@FOXJ1!1.79!61.31!FOXJ1;;chr1:40105299..40105326,-!p1@HEYL!1.77!58.48!HEYL;;chr2:145277882..145277967,-!p3@ZEB2!1.71!85.52!ZEB2;;chr21:39870339..39870443,-!p1@ERG!1.70!49.52!ERG;;chr2:68592406..68592424,+!p1@PLEK!1.70!48.89!PLEK;;chr13:72441074..72441172,-!p2@DACH1!1.69!47.79!DACH1;;chr11:113930401..113930422,+!p3@ZBTB16!1.68!46.85!ZBTB16;;chr15:57511609..57511651,+!p2@TCF12!1.66!74.20!TCF12;;chr2:180427261..180427297,-!p6@ZNF385B!1.63!41.97!ZNF385B;;chr15:42749722..42749739,-!p2@ZFP106!1.60!68.07!ZFP106;;chrY:21906594..21906622,-!p1@KDM5D!1.60!38.36!KDM5D;;chr5:88178983..88179012,-!p1@MEF2C!1.56!262.22!MEF2C;;chr9:14314131..14314147,-!p2@NFIB!1.56!189.43!NFIB;;chr12:52437488..52437507,+!p2@NR4A1!1.56!35.69!NR4A1;;chr5:92918919..92918942,+!p1@NR2F1!1.54!143.68!NR2F1;;chr7:14029283..14029311,-!p1@ETV1!1.53!168.21!ETV1;;chr13:72441506..72441562,-!p3@DACH1!1.53!32.54!DACH1;;chr5:71803177..71803255,-!p1@ZNF366!1.51!31.28!ZNF366;;chr2:180427304..180427323,-!p7@ZNF385B!1.48!28.93!ZNF385B;;chr17:59477233..59477263,+!p1@TBX2!1.46!83.32!TBX2;;chr5:122424918..122424944,+!p1@PRDM6!1.45!27.35!PRDM6;;chr12:54694653..54694672,-!p2@NFE2!1.45!26.88!NFE2;;chr17:59477197..59477212,+!p2@TBX2!1.43!44.49!TBX2;;chr11:113930291..113930339,+!p2@ZBTB16!1.41!40.24!ZBTB16;;chr8:80679993..80680011,-!p1@HEY1!1.41!35.69!HEY1;;chr8:55370487..55370503,+!p1@SOX17!1.41!25.00!SOX17;;chr20:62680984..62680999,-!p1@SOX18!1.40!31.76!SOX18;;chr6:19837592..19837621,+!p1@ID4!1.39!138.18!ID4;;chr11:61520075..61520136,+!p1@C11orf9!1.39!49.52!C11orf9;;chr19:45971246..45971265,+!p1@FOSB!1.38!412.66!FOSB;;chr2:19558373..19558392,-!p1@OSR1!1.38!61.62!OSR1;;chr8:48650715..48650735,-!p1@CEBPD!1.37!2765.54!CEBPD;;chr6:126240442..126240459,+!p4@NCOA7!1.37!28.77!NCOA7;;chr2:46524537..46524553,+!p1@EPAS1!1.36!2060.79!EPAS1;;chr9:3525727..3525828,-!p2@RFX3!1.36!55.18!RFX3;;chr10:51572339..51572376,+!p4@NCOA4!1.36!48.58!NCOA4;;chr9:102584159..102584174,+!p2@NR4A3!1.36!38.99!NR4A3;;chr14:38064429..38064486,-!p1@FOXA1!1.36!22.01!FOXA1;;chr2:100721881..100721904,-!p6@AFF3!1.34!20.91!AFF3;;chr6:168294352..168294371,+!p6@MLLT4!1.34!20.75!MLLT4;;chr6:126240380..126240430,+!p2@NCOA7!1.32!50.62!NCOA7;;chr12:114843852..114843867,-!p3@TBX5!1.32!20.12!TBX5;;chr12:114843940..114843955,-!p2@TBX5!1.32!20.12!TBX5;;chr3:114819124..114819200,-!p3@ZBTB20!1.31!44.80!ZBTB20;;chr2:46524897..46524911,+!p2@EPAS1!1.30!52.66!EPAS1;;chr7:14028488..14028516,-!p2@ETV1!1.30!20.75!ETV1;;chr5:122424955..122424988,+!p2@PRDM6!1.30!19.18!PRDM6;;chr10:51572408..51572454,+!p3@NCOA4!1.29!105.80!NCOA4;;chr7:113726357..113726443,+!p1@FOXP2!1.29!31.44!FOXP2;;chr17:6926362..6926377,+!p1@BCL6B!1.29!18.71!BCL6B;;chr14:36989427..36989442,-!p1@NKX2-1!1.29!18.39!NKX2-1;;chr13:73633131..73633149,+!p1@KLF5!1.28!185.97!KLF5;;chr7:15726220..15726236,-!p4@MEOX2!1.28!18.08!MEOX2;;chr18:19749541..19749557,+!p1@GATA6!1.27!54.39!GATA6;;chr12:115122318..115122331,-!p2@TBX3!1.27!17.45!TBX3;;chr16:54320617..54320643,-!p3@IRX3!1.26!22.01!IRX3;;chr14:74256787..74256858,-!p6@C14orf43!1.26!17.29!C14orf43;;chr7:15726176..15726191,-!p3@MEOX2!1.26!17.29!MEOX2;;chr4:149363494..149363543,-!p1@NR3C2!1.25!16.66!NR3C2;;chr7:14028743..14028799,-!p3@ETV1!1.24!20.59!ETV1;;chr11:47400078..47400106,-!p1@SPI1!1.24!16.19!SPI1;;chr8:106330656..106330684,+!p1@ZFPM2!1.23!41.97!ZFPM2;;chr1:61548374..61548415,+!p4@NFIA!1.23!29.55!NFIA;;chr5:92919100..92919135,+!p3@NR2F1!1.23!19.18!NR2F1;;chr2:180610565..180610578,-!p9@ZNF385B!1.23!16.03!ZNF385B;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.22!15.56!PEG3;;chr9:102584262..102584276,+!p1@NR4A3!1.21!34.11!NR4A3;;chr1:151804244..151804310,-!p1@RORC!1.21!15.25!RORC;;chr3:25469815..25469866,+!p3@RARB!1.21!15.09!RARB;;chr12:96588368..96588394,+!p3@ELK3!1.20!39.46!ELK3;;chr16:54320646..54320672,-!p2@IRX3!1.20!22.48!IRX3;;chr17:53342311..53342400,+!p1@HLF!1.20!17.14!HLF;;chr11:34642656..34642667,+!p2@EHF!1.20!14.93!EHF;;chr10:63809013..63809041,+!p3@ARID5B!1.19!79.86!ARID5B;;chr15:60884706..60884743,-!p1@RORA!1.19!74.67!RORA;;chr5:92918894..92918912,+!p2@NR2F1!1.19!47.00!NR2F1;;chr18:77155922..77155939,+!p1@NFATC1!1.19!39.46!NFATC1;;chr15:100106670..100106697,+!p4@MEF2A!1.18!23.42!MEF2A;;chr2:166326200..166326216,+!p1@CSRNP3!1.18!20.44!CSRNP3;;chr3:126076242..126076257,-!p1@KLF15!1.18!17.45!KLF15;;chr1:209979467..209979494,-!p1@IRF6!1.18!16.03!IRF6;;chr12:96649259..96649290,+!p9@ELK3!1.18!14.31!ELK3;;chr6:1389789..1389821,+!p1@FOXF2!1.17!19.02!FOXF2;;chr7:27192185..27192209,-!p1@HOXA3!1.17!13.68!HOXA3;;chr7:28725740..28725778,+!p1@CREB5!1.16!118.69!CREB5;;chr10:63809077..63809089,+!p5@ARID5B!1.16!29.08!ARID5B;;chr9:14314566..14314618,-!p1@NFIB!1.15!156.89!NFIB;;chr1:61547894..61547968,+!p2@NFIA!1.15!38.04!NFIA;;chr5:88179195..88179224,-!p3@MEF2C!1.15!20.75!MEF2C;;chr3:101546827..101546847,+!p2@NFKBIZ!1.15!18.39!NFKBIZ;;chr6:126240463..126240489,+!p6@NCOA7!1.15!14.78!NCOA7;;chr2:122042770..122042785,-!p1@TFCP2L1!1.15!13.05!TFCP2L1;;chr10:63809106..63809127,+!p1@ARID5B!1.14!170.41!ARID5B;;chr5:2751762..2751784,-!p1@IRX2!1.14!12.89!IRX2;;chr2:145277640..145277771,-!p1@ZEB2!1.13!166.64!ZEB2;;chr3:39195037..39195069,-!p2@CSRNP1!1.13!77.82!CSRNP1;;chr2:66662281..66662308,+!p1@MEIS1!1.13!43.39!MEIS1;;chr20:51588873..51588953,+!p1@TSHZ2!1.13!16.51!TSHZ2;;chr3:141105705..141105770,+!p4@ZBTB38!1.13!15.25!ZBTB38;;chr9:14313893..14313908,-!p7@NFIB!1.12!17.76!NFIB;;chr18:19749386..19749404,+!p2@GATA6!1.12!17.29!GATA6;;chr3:169381183..169381205,-!p4@MECOM!1.12!12.26!MECOM;;chr14:35872962..35873025,-!p3@NFKBIA!1.11!29.87!NFKBIA;;chr1:10754477..10754517,-!p1@CASZ1!1.11!19.96!CASZ1;;chr12:114845810..114845824,-!p1@TBX5!1.11!11.95!TBX5;;chr21:40177845..40177863,+!p1@ETS2!1.10!687.14!ETS2;;chr22:38597987..38598021,+!p2@MAFF!1.10!70.58!MAFF;;chr5:124082322..124082364,-!p1@ZNF608!1.10!30.03!ZNF608;;chr11:125034605..125034636,+!p2@PKNOX2!1.10!11.63!PKNOX2;;chr12:115121802..115121814,-!p5@TBX3!1.10!11.48!TBX3;;chr3:71179699..71179744,-!p2@FOXP1!1.09!85.68!FOXP1;;chr15:96873984..96873999,+!p3@NR2F2!1.09!83.00!NR2F2;;chr2:46524878..46524891,+!p3@EPAS1!1.09!19.81!EPAS1;;chr10:114710244..114710257,+!p3@TCF7L2!1.08!29.87!TCF7L2;;chr3:71355163..71355209,-!p5@FOXP1!1.08!15.41!FOXP1;;chr1:158979686..158979745,+!p1@IFI16!1.07!356.38!IFI16;;chr10:63809090..63809097,+!p7@ARID5B!1.07!15.09!ARID5B;;chr2:61108695..61108753,+!p1@REL!1.06!72.16!REL;;chr8:28748099..28748141,+!p2@HMBOX1!1.06!33.17!HMBOX1;;chrX:56258844..56258882,+!p1@KLF8!1.06!14.46!KLF8;;chrY:21906761..21906810,-!p2@KDM5D!1.06!10.53!KDM5D;;chrX:85403445..85403479,+!p2@DACH2!1.06!10.38!DACH2;;chr17:80797886..80797906,-!p1@ZNF750!1.06!10.38!ZNF750;;chr1:212782094..212782109,+!p1@ATF3!1.05!280.77!ATF3;;chr6:106546808..106546833,+!p3@PRDM1!1.05!12.89!PRDM1;;chr12:54694758..54694805,-!p1@NFE2!1.05!12.42!NFE2;;chr5:92919068..92919082,+!p5@NR2F1!1.05!12.10!NR2F1;;chr5:88179017..88179046,-!p2@MEF2C!1.04!40.24!MEF2C;;chr1:214161272..214161322,+!p1@PROX1!1.04!13.99!PROX1;;chr2:145275982..145276003,-!p7@ZEB2!1.04!10.06!ZEB2;;chr3:114819101..114819121,-!p7@ZBTB20!1.04!9.90!ZBTB20;;chr1:61548225..61548299,+!p1@NFIA!1.03!128.59!NFIA;;chr3:187463179..187463201,-!p2@BCL6!1.03!40.56!BCL6;;chrX:84498989..84499003,+!p1@ZNF711!1.03!13.36!ZNF711;;chr11:113930477..113930488,+!p4@ZBTB16!1.03!9.75!ZBTB16;;chr8:22550982..22550999,-!p1@EGR3!1.02!27.35!EGR3;;chr5:124084493..124084524,-!p2@ZNF608!1.02!21.69!ZNF608;;chr16:54320675..54320715,-!p1@IRX3!1.02!20.59!IRX3;;chr3:25469724..25469773,+!p1@RARB!1.02!13.68!RARB;;chr9:3525848..3525863,-!p6@RFX3!1.02!9.43!RFX3;;chr6:144329384..144329405,-!p1@PLAGL1!1.01!108.31!PLAGL1;;chr19:38085768..38085821,+!p1@ZNF540!1.01!13.99!ZNF540;;chr18:53089538..53089578,-!p14@TCF4!1.01!9.28!TCF4;;chr15:100106244..100106259,+!p2@MEF2A!1.00!21.85!MEF2A;;chrX:131622958..131622978,-!p3@MBNL3!1.00!11.48!MBNL3;;chr18:42260840..42260860,+!p2@SETBP1!1.00!8.96!SETBP1;;chr7:15725992..15726043,-!p7@MEOX2!1.00!8.96!MEOX2;;chr2:238592039..238592054,+!p4@LRRFIP1!1.00!8.96!LRRFIP1;;chr1:47695003..47695042,-!p2@TAL1!1.00!8.96!TAL1;;chr3:193853927..193853944,+!p1@HES1!0.99!292.09!HES1;;chr18:53255415..53255491,-!p1@TCF4!0.99!76.87!TCF4;;chr15:57210961..57211012,+!p3@TCF12!0.99!29.08!TCF12;;chr3:39195139..39195150,-!p3@CSRNP1!0.99!11.32!CSRNP1;;chr7:113726226..113726245,+!p3@FOXP2!0.99!8.80!FOXP2;;chr13:72440901..72440968,-!p4@DACH1!0.99!8.80!DACH1;;chr2:157189180..157189290,-!p1@NR4A2!0.98!45.90!NR4A2;;chrX:107018969..107019024,-!p6@TSC22D3!0.98!11.95!TSC22D3;;chr1:2985760..2985774,+!p1@PRDM16!0.98!8.49!PRDM16;;chrX:70315688..70315709,+!p1@FOXO4!0.97!19.65!FOXO4;;chr10:70320074..70320106,+!p1@TET1!0.97!16.98!TET1;;chr9:14314106..14314119,-!p5@NFIB!0.97!15.41!NFIB;;chr18:53068911..53068935,-!p4@TCF4!0.97!9.43!TCF4;;chr12:114843910..114843921,-!p6@TBX5!0.97!8.33!TBX5;;chr5:2751785..2751808,-!p2@IRX2!0.97!8.33!IRX2;;chr5:137801160..137801176,+!p1@EGR1!0.96!833.18!EGR1;;chr9:110252035..110252057,-!p1@KLF4!0.96!132.52!KLF4;;chr18:53257027..53257052,-!p3@TCF4!0.96!33.33!TCF4;;chr2:66662249..66662267,+!p2@MEIS1!0.96!32.38!MEIS1;;chr22:41763452..41763466,+!p2@TEF!0.96!8.17!TEF;;chrX:48644984..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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000065;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002048;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005153;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005157;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005181;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005911;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0008947 | |||
|ffid_belonging_in_development=UBERON:0001041,UBERON:0008947,UBERON:0002532,UBERON:0006595,UBERON:0010316 | |ffid_belonging_in_development=UBERON:0001041,UBERON:0008947,UBERON:0002532,UBERON:0006595,UBERON:0010316 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 40: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/lung%252c%2520fetal%252c%2520donor1.CNhs11680.10068-101I5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/lung%252c%2520fetal%252c%2520donor1.CNhs11680.10068-101I5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/lung%252c%2520fetal%252c%2520donor1.CNhs11680.10068-101I5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/lung%252c%2520fetal%252c%2520donor1.CNhs11680.10068-101I5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/lung%252c%2520fetal%252c%2520donor1.CNhs11680.10068-101I5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10068-101I5 | |id=FF:10068-101I5 | ||
|is_a=EFO:0002091;;FF:0010068 | |is_a=EFO:0002091;;FF:0010068 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11680 | |library_id=CNhs11680 | ||
| | |library_id_phase_based=2:CNhs11680 | ||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10068 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10068 | |||
|name=lung, fetal, donor1 | |name=lung, fetal, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 50: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11680,LSID808,release008,COMPLETED | |profile_hcage=CNhs11680,LSID808,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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Line 89: | Line 101: | ||
|top_motifs=FOX{I1,J2}:3.81730145131;FOX{D1,D2}:3.64193399616;HBP1_HMGB_SSRP1_UBTF:3.09255710773;RFX2..5_RFXANK_RFXAP:2.99756746135;RBPJ:2.78995437934;FOX{F1,F2,J1}:2.68950224068;EP300:2.6740494614;MAZ:2.64279231827;RFX1:2.59556600185;MZF1:2.56395554445;GATA6:2.51774520031;TLX2:2.47802686068;TBX4,5:2.34153046325;BPTF:2.32600549755;STAT2,4,6:2.23566287867;NFATC1..3:2.15857074591;NANOG:2.13005051946;FOXA2:2.11934971431;SP1:2.077286932;SPZ1:1.9975057303;PRDM1:1.95999433544;STAT1,3:1.95325631593;FOXN1:1.92620082838;TLX1..3_NFIC{dimer}:1.87146884896;HMX1:1.84209510009;MED-1{core}:1.80771144089;SRF:1.74913897037;TGIF1:1.70205228068;FOXO1,3,4:1.62436939924;PATZ1:1.62344712742;SMAD1..7,9:1.6176531007;AR:1.61206196931;FOXQ1:1.5981546376;NKX2-1,4:1.57927673935;GTF2I:1.57838632462;HAND1,2:1.53322862497;TBP:1.50894238917;XBP1:1.50648736588;NKX3-2:1.50605053984;MYFfamily:1.46381100206;MYBL2:1.4153692744;ATF2:1.36577043226;ZNF238:1.32468454888;SOX2:1.24986866623;MTE{core}:1.19452955715;CDC5L:1.13183549093;T:1.10069349232;GZF1:1.09944197809;JUN:1.09392822959;MEF2{A,B,C,D}:1.08973882858;TFAP2{A,C}:1.08099304745;ZFP161:1.06641948503;RREB1:1.06063054335;TEAD1:1.03513531966;ETS1,2:1.00704662666;PBX1:0.996640810626;SOX5:0.992767756612;XCPE1{core}:0.979417520609;EGR1..3:0.977847156671;NFIX:0.959782253946;SNAI1..3:0.936985750033;DBP:0.894351617483;NR6A1:0.875291614385;GCM1,2:0.864248450823;GFI1:0.836254239126;GFI1B:0.809300765584;ALX1:0.786390626381;HIC1:0.780198627595;TFAP4:0.779490892132;NHLH1,2:0.734607180097;IRF7:0.734290913311;POU3F1..4:0.728922194116;TFCP2:0.709450193728;PAX5:0.671675240303;ZEB1:0.657626840232;IKZF2:0.653090938138;EBF1:0.644236474934;SOX{8,9,10}:0.616598621055;LEF1_TCF7_TCF7L1,2:0.614498891824;IRF1,2:0.610228285593;HNF1A:0.609727244878;PAX6:0.593653014952;MTF1:0.588935356184;ZIC1..3:0.580161683562;CREB1:0.564680688931;ZNF148:0.550532556385;NR3C1:0.526854158924;FOXP1:0.519509666646;HSF1,2:0.505443829685;BREu{core}:0.490701931605;SOX17:0.475370453659;ATF4:0.469167637871;TEF:0.431193016759;NKX3-1:0.399652915484;GLI1..3:0.389416703102;ELF1,2,4:0.383628469343;CDX1,2,4:0.378894709748;HIF1A:0.376022584818;LMO2:0.370846726273;SPIB:0.366594153666;ZNF423:0.349365842631;IKZF1:0.343857422984;HMGA1,2:0.33619224677;NR1H4:0.304683914878;KLF4:0.293647618088;MYOD1:0.289260950841;AHR_ARNT_ARNT2:0.274664761102;ATF6:0.272193442771;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.26150224383;GATA4:0.239787254416;FOXD3:0.22833970977;TFAP2B:0.219328801472;FOXP3:0.194531520116;CUX2:0.146722536673;NFIL3:0.138772404669;NFKB1_REL_RELA:0.125674805413;ZNF384:0.120411811749;NRF1:0.103988337647;PAX2:0.103793567681;FOXL1:0.0986964271347;SPI1:0.0980925217424;GTF2A1,2:0.0943186915631;RXR{A,B,G}:0.0519460014267;NKX2-3_NKX2-5:0.0439448042741;POU6F1:0.0427781020859;CEBPA,B_DDIT3:0.0397081589579;NANOG{mouse}:0.0364355767091;DMAP1_NCOR{1,2}_SMARC:0.0203446511079;ESR1:0.00721466754893;HNF4A_NR2F1,2:0.000302048738372;SREBF1,2:-0.0277560877455;MAFB:-0.0331387302681;ZNF143:-0.0371531828899;HLF:-0.0384878834966;STAT5{A,B}:-0.0535397218124;PRRX1,2:-0.0598708543642;REST:-0.0826791398865;ATF5_CREB3:-0.0829458785486;TAL1_TCF{3,4,12}:-0.0918736136554;ZBTB6:-0.112921185653;ALX4:-0.163963023834;HOX{A6,A7,B6,B7}:-0.167720919779;ADNP_IRX_SIX_ZHX:-0.195213092372;MYB:-0.19571452293;PAX8:-0.206325705869;FOSL2:-0.236103253977;RUNX1..3:-0.304469682947;HOX{A5,B5}:-0.316501348113;RORA:-0.367908919364;POU2F1..3:-0.392967752771;NKX6-1,2:-0.446539991115;TP53:-0.458561751906;AIRE:-0.486390147045;NFY{A,B,C}:-0.505108353586;PPARG:-0.514686339345;ARID5B:-0.514718683957;POU5F1:-0.544064665655;NR5A1,2:-0.544952821523;HOX{A4,D4}:-0.548706971209;FOS_FOS{B,L1}_JUN{B,D}:-0.57106382556;E2F1..5:-0.581139031084;NFE2:-0.613833491397;ESRRA:-0.62078696375;HES1:-0.623869048899;VSX1,2:-0.625632381165;NKX2-2,8:-0.653361268497;TOPORS:-0.690008825087;PAX3,7:-0.718039125094;BACH2:-0.729416204799;NFE2L1:-0.732059413127;FOXM1:-0.768676656078;PDX1:-0.7838536865;UFEwm:-0.788054833406;POU1F1:-0.802963275754;RXRA_VDR{dimer}:-0.865475812693;LHX3,4:-0.881902029971;bHLH_family:-0.886428407514;CRX:-0.89462367732;TFDP1:-0.903811411877;PITX1..3:-0.923178594085;PAX1,9:-1.01307254814;ELK1,4_GABP{A,B1}:-1.01556744759;ZBTB16:-1.0299128597;HOXA9_MEIS1:-1.06573547763;NFE2L2:-1.0850308931;PAX4:-1.13939622071;OCT4_SOX2{dimer}:-1.14266828815;EN1,2:-1.45010012557;YY1:-1.52844708996;ONECUT1,2:-1.52964217226;EVI1:-1.69134509096;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.84523130317 | |top_motifs=FOX{I1,J2}:3.81730145131;FOX{D1,D2}:3.64193399616;HBP1_HMGB_SSRP1_UBTF:3.09255710773;RFX2..5_RFXANK_RFXAP:2.99756746135;RBPJ:2.78995437934;FOX{F1,F2,J1}:2.68950224068;EP300:2.6740494614;MAZ:2.64279231827;RFX1:2.59556600185;MZF1:2.56395554445;GATA6:2.51774520031;TLX2:2.47802686068;TBX4,5:2.34153046325;BPTF:2.32600549755;STAT2,4,6:2.23566287867;NFATC1..3:2.15857074591;NANOG:2.13005051946;FOXA2:2.11934971431;SP1:2.077286932;SPZ1:1.9975057303;PRDM1:1.95999433544;STAT1,3:1.95325631593;FOXN1:1.92620082838;TLX1..3_NFIC{dimer}:1.87146884896;HMX1:1.84209510009;MED-1{core}:1.80771144089;SRF:1.74913897037;TGIF1:1.70205228068;FOXO1,3,4:1.62436939924;PATZ1:1.62344712742;SMAD1..7,9:1.6176531007;AR:1.61206196931;FOXQ1:1.5981546376;NKX2-1,4:1.57927673935;GTF2I:1.57838632462;HAND1,2:1.53322862497;TBP:1.50894238917;XBP1:1.50648736588;NKX3-2:1.50605053984;MYFfamily:1.46381100206;MYBL2:1.4153692744;ATF2:1.36577043226;ZNF238:1.32468454888;SOX2:1.24986866623;MTE{core}:1.19452955715;CDC5L:1.13183549093;T:1.10069349232;GZF1:1.09944197809;JUN:1.09392822959;MEF2{A,B,C,D}:1.08973882858;TFAP2{A,C}:1.08099304745;ZFP161:1.06641948503;RREB1:1.06063054335;TEAD1:1.03513531966;ETS1,2:1.00704662666;PBX1:0.996640810626;SOX5:0.992767756612;XCPE1{core}:0.979417520609;EGR1..3:0.977847156671;NFIX:0.959782253946;SNAI1..3:0.936985750033;DBP:0.894351617483;NR6A1:0.875291614385;GCM1,2:0.864248450823;GFI1:0.836254239126;GFI1B:0.809300765584;ALX1:0.786390626381;HIC1:0.780198627595;TFAP4:0.779490892132;NHLH1,2:0.734607180097;IRF7:0.734290913311;POU3F1..4:0.728922194116;TFCP2:0.709450193728;PAX5:0.671675240303;ZEB1:0.657626840232;IKZF2:0.653090938138;EBF1:0.644236474934;SOX{8,9,10}:0.616598621055;LEF1_TCF7_TCF7L1,2:0.614498891824;IRF1,2:0.610228285593;HNF1A:0.609727244878;PAX6:0.593653014952;MTF1:0.588935356184;ZIC1..3:0.580161683562;CREB1:0.564680688931;ZNF148:0.550532556385;NR3C1:0.526854158924;FOXP1:0.519509666646;HSF1,2:0.505443829685;BREu{core}:0.490701931605;SOX17:0.475370453659;ATF4:0.469167637871;TEF:0.431193016759;NKX3-1:0.399652915484;GLI1..3:0.389416703102;ELF1,2,4:0.383628469343;CDX1,2,4:0.378894709748;HIF1A:0.376022584818;LMO2:0.370846726273;SPIB:0.366594153666;ZNF423:0.349365842631;IKZF1:0.343857422984;HMGA1,2:0.33619224677;NR1H4:0.304683914878;KLF4:0.293647618088;MYOD1:0.289260950841;AHR_ARNT_ARNT2:0.274664761102;ATF6:0.272193442771;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.26150224383;GATA4:0.239787254416;FOXD3:0.22833970977;TFAP2B:0.219328801472;FOXP3:0.194531520116;CUX2:0.146722536673;NFIL3:0.138772404669;NFKB1_REL_RELA:0.125674805413;ZNF384:0.120411811749;NRF1:0.103988337647;PAX2:0.103793567681;FOXL1:0.0986964271347;SPI1:0.0980925217424;GTF2A1,2:0.0943186915631;RXR{A,B,G}:0.0519460014267;NKX2-3_NKX2-5:0.0439448042741;POU6F1:0.0427781020859;CEBPA,B_DDIT3:0.0397081589579;NANOG{mouse}:0.0364355767091;DMAP1_NCOR{1,2}_SMARC:0.0203446511079;ESR1:0.00721466754893;HNF4A_NR2F1,2:0.000302048738372;SREBF1,2:-0.0277560877455;MAFB:-0.0331387302681;ZNF143:-0.0371531828899;HLF:-0.0384878834966;STAT5{A,B}:-0.0535397218124;PRRX1,2:-0.0598708543642;REST:-0.0826791398865;ATF5_CREB3:-0.0829458785486;TAL1_TCF{3,4,12}:-0.0918736136554;ZBTB6:-0.112921185653;ALX4:-0.163963023834;HOX{A6,A7,B6,B7}:-0.167720919779;ADNP_IRX_SIX_ZHX:-0.195213092372;MYB:-0.19571452293;PAX8:-0.206325705869;FOSL2:-0.236103253977;RUNX1..3:-0.304469682947;HOX{A5,B5}:-0.316501348113;RORA:-0.367908919364;POU2F1..3:-0.392967752771;NKX6-1,2:-0.446539991115;TP53:-0.458561751906;AIRE:-0.486390147045;NFY{A,B,C}:-0.505108353586;PPARG:-0.514686339345;ARID5B:-0.514718683957;POU5F1:-0.544064665655;NR5A1,2:-0.544952821523;HOX{A4,D4}:-0.548706971209;FOS_FOS{B,L1}_JUN{B,D}:-0.57106382556;E2F1..5:-0.581139031084;NFE2:-0.613833491397;ESRRA:-0.62078696375;HES1:-0.623869048899;VSX1,2:-0.625632381165;NKX2-2,8:-0.653361268497;TOPORS:-0.690008825087;PAX3,7:-0.718039125094;BACH2:-0.729416204799;NFE2L1:-0.732059413127;FOXM1:-0.768676656078;PDX1:-0.7838536865;UFEwm:-0.788054833406;POU1F1:-0.802963275754;RXRA_VDR{dimer}:-0.865475812693;LHX3,4:-0.881902029971;bHLH_family:-0.886428407514;CRX:-0.89462367732;TFDP1:-0.903811411877;PITX1..3:-0.923178594085;PAX1,9:-1.01307254814;ELK1,4_GABP{A,B1}:-1.01556744759;ZBTB16:-1.0299128597;HOXA9_MEIS1:-1.06573547763;NFE2L2:-1.0850308931;PAX4:-1.13939622071;OCT4_SOX2{dimer}:-1.14266828815;EN1,2:-1.45010012557;YY1:-1.52844708996;ONECUT1,2:-1.52964217226;EVI1:-1.69134509096;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.84523130317 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10068-101I5;search_select_hide=table117:FF:10068-101I5 | |||
}} | }} |
Latest revision as of 12:19, 3 June 2020
Name: | lung, fetal, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11680 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11680
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11680
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0111 |
10 | 10 | 0.0193 |
100 | 100 | 0.247 |
101 | 101 | 0.753 |
102 | 102 | 0.407 |
103 | 103 | 0.385 |
104 | 104 | 0.796 |
105 | 105 | 0.596 |
106 | 106 | 0.182 |
107 | 107 | 0.695 |
108 | 108 | 0.262 |
109 | 109 | 0.00595 |
11 | 11 | 0.0282 |
110 | 110 | 0.132 |
111 | 111 | 0.00337 |
112 | 112 | 0.703 |
113 | 113 | 0.381 |
114 | 114 | 0.0194 |
115 | 115 | 0.894 |
116 | 116 | 0.135 |
117 | 117 | 0.00628 |
118 | 118 | 0.103 |
119 | 119 | 0.056 |
12 | 12 | 0.893 |
120 | 120 | 0.103 |
121 | 121 | 0.467 |
122 | 122 | 0.992 |
123 | 123 | 0.0435 |
124 | 124 | 0.904 |
125 | 125 | 0.0366 |
126 | 126 | 0.936 |
127 | 127 | 0.118 |
128 | 128 | 0.279 |
129 | 129 | 0.165 |
13 | 13 | 0.305 |
130 | 130 | 0.568 |
131 | 131 | 0.0547 |
132 | 132 | 0.604 |
133 | 133 | 0.162 |
134 | 134 | 0.677 |
135 | 135 | 0.108 |
136 | 136 | 0.134 |
137 | 137 | 0.904 |
138 | 138 | 0.495 |
139 | 139 | 0.0277 |
14 | 14 | 0.944 |
140 | 140 | 0.4 |
141 | 141 | 0.394 |
142 | 142 | 0.433 |
143 | 143 | 0.0146 |
144 | 144 | 0.687 |
145 | 145 | 0.584 |
146 | 146 | 0.926 |
147 | 147 | 0.694 |
148 | 148 | 0.0266 |
149 | 149 | 0.643 |
15 | 15 | 0.258 |
150 | 150 | 0.237 |
151 | 151 | 0.434 |
152 | 152 | 0.171 |
153 | 153 | 0.685 |
154 | 154 | 0.649 |
155 | 155 | 0.135 |
156 | 156 | 0.424 |
157 | 157 | 0.801 |
158 | 158 | 0.683 |
159 | 159 | 0.285 |
16 | 16 | 0.116 |
160 | 160 | 0.643 |
161 | 161 | 0.332 |
162 | 162 | 0.663 |
163 | 163 | 0.7 |
164 | 164 | 0.0574 |
165 | 165 | 0.415 |
166 | 166 | 0.714 |
167 | 167 | 0.00721 |
168 | 168 | 0.718 |
169 | 169 | 0.00367 |
17 | 17 | 0.202 |
18 | 18 | 0.0174 |
19 | 19 | 0.73 |
2 | 2 | 0.504 |
20 | 20 | 0.231 |
21 | 21 | 0.255 |
22 | 22 | 0.47 |
23 | 23 | 0.662 |
24 | 24 | 0.874 |
25 | 25 | 0.523 |
26 | 26 | 0.0132 |
27 | 27 | 0.496 |
28 | 28 | 0.97 |
29 | 29 | 0.0315 |
3 | 3 | 0.114 |
30 | 30 | 0.154 |
31 | 31 | 0.594 |
32 | 32 | 0.367 |
33 | 33 | 0.513 |
34 | 34 | 0.615 |
35 | 35 | 0.165 |
36 | 36 | 0.0247 |
37 | 37 | 0.0542 |
38 | 38 | 0.497 |
39 | 39 | 0.448 |
4 | 4 | 0.318 |
40 | 40 | 0.0727 |
41 | 41 | 0.274 |
42 | 42 | 0.411 |
43 | 43 | 0.142 |
44 | 44 | 0.164 |
45 | 45 | 0.504 |
46 | 46 | 0.0608 |
47 | 47 | 0.0447 |
48 | 48 | 0.0596 |
49 | 49 | 0.0515 |
5 | 5 | 0.753 |
50 | 50 | 0.907 |
51 | 51 | 0.665 |
52 | 52 | 0.557 |
53 | 53 | 0.693 |
54 | 54 | 0.661 |
55 | 55 | 0.665 |
56 | 56 | 0.568 |
57 | 57 | 0.138 |
58 | 58 | 0.635 |
59 | 59 | 0.458 |
6 | 6 | 0.475 |
60 | 60 | 0.858 |
61 | 61 | 0.189 |
62 | 62 | 0.368 |
63 | 63 | 0.308 |
64 | 64 | 0.0714 |
65 | 65 | 0.39 |
66 | 66 | 0.0993 |
67 | 67 | 0.584 |
68 | 68 | 0.566 |
69 | 69 | 0.169 |
7 | 7 | 0.743 |
70 | 70 | 0.0147 |
71 | 71 | 0.0694 |
72 | 72 | 0.64 |
73 | 73 | 0.0219 |
74 | 74 | 0.268 |
75 | 75 | 0.00514 |
76 | 76 | 0.135 |
77 | 77 | 0.573 |
78 | 78 | 0.0273 |
79 | 79 | 0.266 |
8 | 8 | 0.0525 |
80 | 80 | 0.162 |
81 | 81 | 0.0863 |
82 | 82 | 0.241 |
83 | 83 | 0.914 |
84 | 84 | 0.531 |
85 | 85 | 0.322 |
86 | 86 | 0.533 |
87 | 87 | 8.6695e-4 |
88 | 88 | 0.824 |
89 | 89 | 0.376 |
9 | 9 | 0.769 |
90 | 90 | 0.0506 |
91 | 91 | 0.98 |
92 | 92 | 0.616 |
93 | 93 | 0.141 |
94 | 94 | 0.071 |
95 | 95 | 0.00672 |
96 | 96 | 0.287 |
97 | 97 | 0.501 |
98 | 98 | 0.111 |
99 | 99 | 0.456 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11680
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010068 human lung - fetal sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002048 (lung)
0002100 (trunk)
0000479 (tissue)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0005177 (trunk region element)
0000117 (respiratory tube)
0000171 (respiration organ)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010068 (human lung - fetal sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0001041 (foregut)
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)