FF:10068-101I5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005829 | ||
|accession_numbers=CAGE;DRX008679;DRR009551;DRZ000976;DRZ002361;DRZ012326;DRZ013711 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002048,UBERON:0002100,UBERON:0000479,UBERON:0004119,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0005178,UBERON:0005177,UBERON:0000117,UBERON:0000171,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0000065,UBERON:0000170,UBERON:0001004,UBERON:0002224,UBERON:0000915 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010068 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/lung%252c%2520fetal%252c%2520donor1.CNhs11680.10068-101I5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/lung%252c%2520fetal%252c%2520donor1.CNhs11680.10068-101I5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/lung%252c%2520fetal%252c%2520donor1.CNhs11680.10068-101I5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/lung%252c%2520fetal%252c%2520donor1.CNhs11680.10068-101I5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/lung%252c%2520fetal%252c%2520donor1.CNhs11680.10068-101I5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10068-101I5 | |id=FF:10068-101I5 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010068 | ||
|is_obsolete= | |||
|library_id=CNhs11680 | |||
|library_id_phase_based=2:CNhs11680 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10068 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10068 | |||
|name=lung, fetal, donor1 | |name=lung, fetal, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11680,LSID808,release008,COMPLETED | |profile_hcage=CNhs11680,LSID808,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|repeat_enrich_byname=0.0634100406668813,0.744990802772656,0,0,0.312242882320005,0,0,0.118730395337086,0.118730395337086,0.0634100406668813,0.505266716103996,0,0.118730395337086,0,0,0,0.278910168197756,0.223149088062444,0.433012946762829,-0.0247847471863857,0,0,0.146527502694069,0,0.251886688790383,0.0634100406668813,0.118730395337086,0.410278233557711,0.167793590669332,0.167793590669332,0.35365362173546,0,0.0396737237167677,0,0.762644477870667,0.059365197668543,0.0634100406668813,0.211872352186983,0,0.0317050203334407,0.584377464225682,0,-0.0483147167543181,0.415051300167255,0,0.0634100406668813,0,0.167793590669332,-0.154638853666217,0.0634100406668813,-0.0574694431268593,-0.019310127656536,0.836065023202345,0.146545896474973,0.0630178985559042,0,0,0,0.0153746580626191,0.269263927404389,0,0,0.361035650728339,0.390463088711559,0,0,2.07384831191359,0,-0.109839881475574,0.0295931406466502,0,-0.0772706497379021,0.167793590669332,0,0.0634100406668813,0.349400754156297,0,0.0634100406668813,0,0,0.211872352186983,0.0317050203334407,0,0.620751951060337,-0.326988596678969,0.0317050203334407,0.118730395337086,0.35365362173546,0.0634100406668813,0.0647575209726294,0,0.0917326468584403,0.00960197950143943,-0.150901581147775,0.164004459835989,0.530813512981741,0.0634100406668813,0.442601075762743,0.0137434506418196,0.216648572289328,-0.0977172673805835,0.288641048892927,0.163671902185612,0.0634100406668813,0.0408522320752329,0.548055720866371,0.059533657002166,-0.118540273983665,0.118259723225235,0.204007703498983,-0.0780812838305724,0,0.35365362173546,0,0.204822946164904,0.0621394624776854,0.0549398951581856,0.266987318412837,0.126563186171113,0.177617372252943,0.106150237592152,-0.184962161171159,-0.0320497133428153,0.631977531036521,0.0885220967513506,0,0.417125736716387,0.118730395337086,0.35365362173546,0.107920596166795,0.00703908174717375,0.169170169775187,0.00160259702184495,0,0.439712145414982,-0.0683442610773682,0.251886688790383,-0.164490278725051,-0.225446450874322,0.118730395337086,0.00059427158075881,-0.41098364020208,0.0634100406668813,0.0634100406668813,-0.412280375247375,0.0746615339857677,0.791532202142153,0.00916272121075523,0.262935812819026,-0.169445520888663,0.0121897441723822,0.088560692647346,0,0.156263502404832,0.0910702180019836,0.322685949498141,-0.027279502120308,0.0541478533491947,0.075667328821514,0.0634100406668813,0.074617909527906,-0.0474736130463589,0.15911888870885,-0.0687411836562777,0.060283568525261,0.267815545263496,0.231288878189448,0.0472025696410823,0.566974900279081,0.336154002759599,1.92548046927667,0,0.421353280435239,0.586490656097801,-0.0798310331866728,0.119767279934144,0,0.808757694837614,0.0634100406668813,0.411887581785596,0.0503462768664161,0.0437234765590923,-0.421703356136154,0.0441061866639368,-0.0744101019566807,0.0634100406668813,-0.00112245711316261,0.747508868173234,0.0634100406668813,-0.0749924371262677,0.206376036106146,0.322308240653542,0.0615052688523434,0.279525966460146,0.126330503329912,0.178397955445,0,0.0229768710703253,0,0.0634100406668813,-0.00118819137085251,0.0164106510259946,0,0.150142056104972,0.446766974928501,0.0449722147064598,0.0959012787520487,0,0,0.422110188592857,0.0868189293238406,0.744990802772656,0.309545538969241,0.315743368009237,0.0589993136389297,0.329835860828695,0.0910702180019836,0.749985293085494,0.0634100406668813,0.118730395337086,-0.177527765965176,0.211872352186983,0.0392851144068066,0,0,-0.218176276265383,-0.116628112990133,0.0634100406668813,0.0317050203334407,0,-0.135900492889221,0.0827212351988504,0.0634100406668813,0,0,0,0,0.128935216762141,-0.0969493222929758,0.436698871925705,0.288523274754883,-0.347751138568439,0,0,0,0.60063335988667,0.0634100406668813,0.159117159538539,0.221769584413795,0.617428770200524,-0.177432922477034,0.0990996512482147,-0.059607375009539,0,0,0,0.0109871640507343,-0.152313361886593,-0.0845061667576375,0,-0.0131323111605455,0,0.083896795334666,0.167793590669332,0,0.296747145668795,0,0,0,0,-0.057730457053664,-0.331639724727947,0,0,0,-0.213544360934909,0,0,0,0.18551054621654,0.140997672266895,0,0,-0.255787671340501,0.0634100406668813,-0.155354040698531,0.086211711122491,0,-0.114736313497181,-0.112927839147842,0.14057247179177,0,0,0.356081638410637,0,0,0.0318662049523339,0,0,0.0365366229238661,0,0,0,0.0634100406668813,0.118730395337086,0,0.923468259896649,0.0910702180019836,0,0.0634100406668813,0,0,0.436042898264065,0,0.167793590669332,0,0,0,-0.0114826573583049,-0.0922240566585104,0,0,0,0,0.118730395337086,0.185308542063735,0,0.165726948349254,-0.318571088640166,0.0317050203334407,0.0634100406668813,0,0,0,0,0,0,0.0119696215813809,0,0,0,0,0,-0.0969923612426051,0,0.0634100406668813,0,0,-0.564807121153884,0,0,-0.109568541524182,0,0,0,0,0,0,0.00129503949586217,0,0,0,0,0,0,-0.123319086035448,0.231698000715095,0,0,0,0,0,0,0,-0.211423257539209,0,0,0,0,-0.0504743330420959,0,0,0,0.27809175066885,0,-0.160318030086386,0,0,0,0,0,0,0.0317050203334407,0,0,0,0,0,0,0.0634100406668813,0,0,0,0,0.0317050203334407,0,0.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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:RtHFN: Lung | |rna_catalog_number=Cat:RtHFN: Lung | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=50 | |rna_weight_ug=50 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=A? | |sample_ethnicity=A? | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.14910350607656e-269!GO:0005737;cytoplasm;2.69074497698187e-121!GO:0043226;organelle;3.45314638433211e-106!GO:0043229;intracellular organelle;7.43401758109677e-106!GO:0005515;protein binding;6.18171875661467e-101!GO:0043227;membrane-bound organelle;6.59657166820975e-98!GO:0043231;intracellular membrane-bound organelle;7.50806786732662e-98!GO:0044444;cytoplasmic part;1.98956865758929e-62!GO:0044422;organelle part;4.33687260556611e-61!GO:0044446;intracellular organelle part;4.39543535610316e-60!GO:0043170;macromolecule metabolic process;1.3798254751527e-47!GO:0032991;macromolecular complex;3.70519242987359e-46!GO:0005634;nucleus;3.61693859210882e-45!GO:0044238;primary metabolic process;6.44090414865156e-45!GO:0016043;cellular component organization and biogenesis;6.24632455342371e-44!GO:0003723;RNA binding;1.03217520984179e-43!GO:0044237;cellular metabolic process;2.0184675484486e-43!GO:0044428;nuclear part;2.49570062836998e-39!GO:0043233;organelle lumen;2.30135248885524e-36!GO:0031974;membrane-enclosed lumen;2.30135248885524e-36!GO:0019538;protein metabolic process;7.57074515798742e-36!GO:0030529;ribonucleoprotein complex;2.54531441556228e-34!GO:0033036;macromolecule localization;9.07071196346381e-33!GO:0015031;protein transport;6.24341436145961e-31!GO:0044267;cellular protein metabolic process;1.00297041587332e-29!GO:0044260;cellular macromolecule metabolic process;1.03028425519953e-29!GO:0008104;protein localization;2.09635689020536e-29!GO:0045184;establishment of protein localization;2.34088124516859e-29!GO:0043283;biopolymer metabolic process;2.84024608497603e-29!GO:0016071;mRNA metabolic process;3.72732568675739e-28!GO:0031981;nuclear lumen;4.71263971080401e-27!GO:0008380;RNA splicing;1.29062144523992e-25!GO:0010467;gene expression;3.34012594730326e-25!GO:0046907;intracellular transport;3.60530985499083e-25!GO:0043234;protein complex;9.37585273981606e-25!GO:0006396;RNA processing;7.81376705023511e-24!GO:0005829;cytosol;1.72171049276116e-23!GO:0006397;mRNA processing;3.89861805150507e-23!GO:0031090;organelle membrane;3.65714966068821e-22!GO:0006886;intracellular protein transport;2.54403322292467e-21!GO:0008134;transcription factor binding;6.0374192318422e-21!GO:0065003;macromolecular complex assembly;3.85176226481685e-20!GO:0006412;translation;8.415600413933e-20!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.38389644718354e-19!GO:0005654;nucleoplasm;7.05301225189396e-19!GO:0006996;organelle organization and biogenesis;2.41308466608298e-18!GO:0022607;cellular component assembly;3.24548783516396e-18!GO:0005681;spliceosome;3.33031531575644e-17!GO:0051649;establishment of cellular localization;3.35704471565026e-17!GO:0000166;nucleotide binding;3.45742091014182e-17!GO:0050794;regulation of cellular process;8.62346388248403e-17!GO:0048523;negative regulation of cellular process;9.81979260098454e-17!GO:0051641;cellular localization;1.00598192335561e-16!GO:0016192;vesicle-mediated transport;2.15390442032498e-16!GO:0005840;ribosome;2.31325118283997e-16!GO:0043228;non-membrane-bound organelle;4.32715297871345e-16!GO:0043232;intracellular non-membrane-bound organelle;4.32715297871345e-16!GO:0044451;nucleoplasm part;4.8060142936036e-16!GO:0005739;mitochondrion;8.86904004405479e-16!GO:0050789;regulation of biological process;1.20220375770293e-15!GO:0048770;pigment granule;3.61114259668369e-15!GO:0042470;melanosome;3.61114259668369e-15!GO:0048519;negative regulation of biological process;9.39023431881641e-15!GO:0031967;organelle envelope;2.45344753628796e-14!GO:0003735;structural constituent of ribosome;2.59118615070734e-14!GO:0031975;envelope;2.87860222247752e-14!GO:0009059;macromolecule biosynthetic process;3.09929543688447e-14!GO:0005794;Golgi apparatus;3.41202653388267e-14!GO:0003712;transcription cofactor activity;7.12117880995819e-14!GO:0016070;RNA metabolic process;7.54748158448657e-14!GO:0033279;ribosomal subunit;1.01487889606204e-13!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.4097593647583e-13!GO:0044445;cytosolic part;2.88108564811305e-13!GO:0043412;biopolymer modification;5.40930754673094e-13!GO:0065007;biological regulation;5.70914929384374e-13!GO:0006464;protein modification process;1.22323691971991e-12!GO:0003676;nucleic acid binding;1.77910861214765e-12!GO:0043687;post-translational protein modification;1.84631051396643e-12!GO:0030036;actin cytoskeleton organization and biogenesis;2.5669555657974e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;2.87281808242684e-12!GO:0016462;pyrophosphatase activity;4.58288059838486e-12!GO:0006366;transcription from RNA polymerase II promoter;4.63978415974733e-12!GO:0017111;nucleoside-triphosphatase activity;4.70345909677107e-12!GO:0006511;ubiquitin-dependent protein catabolic process;5.02542858310805e-12!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.34551860628708e-12!GO:0019941;modification-dependent protein catabolic process;5.38538724440716e-12!GO:0043632;modification-dependent macromolecule catabolic process;5.38538724440716e-12!GO:0016817;hydrolase activity, acting on acid anhydrides;7.44596973206961e-12!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.57235643336576e-12!GO:0006512;ubiquitin cycle;7.82285184883647e-12!GO:0044257;cellular protein catabolic process;9.57189834894266e-12!GO:0032553;ribonucleotide binding;1.27111207134877e-11!GO:0032555;purine ribonucleotide binding;1.27111207134877e-11!GO:0044429;mitochondrial part;2.47872725862366e-11!GO:0016874;ligase activity;3.85204925175359e-11!GO:0006457;protein folding;4.23334394273994e-11!GO:0017076;purine nucleotide binding;4.23334394273994e-11!GO:0012505;endomembrane system;4.66769654843078e-11!GO:0048193;Golgi vesicle transport;5.9730136927941e-11!GO:0016604;nuclear body;6.03702669499071e-11!GO:0006119;oxidative phosphorylation;7.2199319986304e-11!GO:0030029;actin filament-based process;7.62355086061818e-11!GO:0006605;protein targeting;1.02626772044129e-10!GO:0022618;protein-RNA complex assembly;2.42684430659717e-10!GO:0009058;biosynthetic process;3.51745380475229e-10!GO:0006793;phosphorus metabolic process;5.32083859927101e-10!GO:0006796;phosphate metabolic process;5.32083859927101e-10!GO:0016607;nuclear speck;5.77458936771816e-10!GO:0012501;programmed cell death;6.06088070944622e-10!GO:0044249;cellular biosynthetic process;6.22892774247091e-10!GO:0006913;nucleocytoplasmic transport;6.23029894111657e-10!GO:0008092;cytoskeletal protein binding;6.29831160065278e-10!GO:0006915;apoptosis;6.4769120442185e-10!GO:0008219;cell death;8.38732843019143e-10!GO:0016265;death;8.38732843019143e-10!GO:0019899;enzyme binding;8.57815782432429e-10!GO:0051169;nuclear transport;1.6292549584589e-09!GO:0030163;protein catabolic process;1.93770174616612e-09!GO:0044265;cellular macromolecule catabolic process;2.61034311011084e-09!GO:0043285;biopolymer catabolic process;2.88332528810925e-09!GO:0016564;transcription repressor activity;3.50558711155192e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;5.46401511645146e-09!GO:0000375;RNA splicing, via transesterification reactions;5.46401511645146e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.46401511645146e-09!GO:0004842;ubiquitin-protein ligase activity;6.16363210621591e-09!GO:0008639;small protein conjugating enzyme activity;7.00012192006724e-09!GO:0006461;protein complex assembly;7.6632326907495e-09!GO:0006259;DNA metabolic process;1.04355445924855e-08!GO:0005524;ATP binding;1.10463400024944e-08!GO:0032559;adenyl ribonucleotide binding;1.1407852284399e-08!GO:0016310;phosphorylation;1.15939826166123e-08!GO:0005783;endoplasmic reticulum;1.26297792375434e-08!GO:0008135;translation factor activity, nucleic acid binding;1.77550854774011e-08!GO:0019787;small conjugating protein ligase activity;2.10708842122465e-08!GO:0007010;cytoskeleton organization and biogenesis;2.52150885012756e-08!GO:0030554;adenyl nucleotide binding;4.16363932378418e-08!GO:0005740;mitochondrial envelope;5.51265242710328e-08!GO:0008565;protein transporter activity;5.51265242710328e-08!GO:0031966;mitochondrial membrane;7.19263277492475e-08!GO:0016887;ATPase activity;7.3879859318902e-08!GO:0051082;unfolded protein binding;7.99969129849982e-08!GO:0019866;organelle inner membrane;9.95959906763714e-08!GO:0031982;vesicle;1.21375065154824e-07!GO:0006950;response to stress;1.40128024055053e-07!GO:0003713;transcription coactivator activity;1.72050073620034e-07!GO:0005730;nucleolus;2.28616436348021e-07!GO:0005635;nuclear envelope;2.45767129948335e-07!GO:0015935;small ribosomal subunit;2.73240173794886e-07!GO:0031252;leading edge;2.93303378894809e-07!GO:0003714;transcription corepressor activity;3.07711265760105e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.24276835744251e-07!GO:0051246;regulation of protein metabolic process;3.26405286224392e-07!GO:0031410;cytoplasmic vesicle;3.3298086814027e-07!GO:0016563;transcription activator activity;3.47234576505845e-07!GO:0006446;regulation of translational initiation;3.84561304712078e-07!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.87053761081498e-07!GO:0031988;membrane-bound vesicle;3.87053761081498e-07!GO:0016881;acid-amino acid ligase activity;3.87053761081498e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.95326327158638e-07!GO:0031965;nuclear membrane;5.17244213307863e-07!GO:0043069;negative regulation of programmed cell death;5.92511150249168e-07!GO:0031324;negative regulation of cellular metabolic process;6.26407717464786e-07!GO:0003743;translation initiation factor activity;6.87396108441357e-07!GO:0005743;mitochondrial inner membrane;7.11945729118514e-07!GO:0043066;negative regulation of apoptosis;7.18315481381369e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.20001698966179e-07!GO:0019222;regulation of metabolic process;7.2294276630016e-07!GO:0015934;large ribosomal subunit;7.26471091209341e-07!GO:0007264;small GTPase mediated signal transduction;8.39481214663508e-07!GO:0009892;negative regulation of metabolic process;9.34062306259228e-07!GO:0015630;microtubule cytoskeleton;9.34062306259228e-07!GO:0016023;cytoplasmic membrane-bound vesicle;9.34062306259228e-07!GO:0016481;negative regulation of transcription;9.97320800015809e-07!GO:0009057;macromolecule catabolic process;1.0698574940367e-06!GO:0007243;protein kinase cascade;1.24594992551461e-06!GO:0045786;negative regulation of progression through cell cycle;1.81588416453786e-06!GO:0000502;proteasome complex (sensu Eukaryota);1.89504401209523e-06!GO:0017038;protein import;2.23112263679998e-06!GO:0005768;endosome;2.23112263679998e-06!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.31532190119708e-06!GO:0006916;anti-apoptosis;2.38667218893374e-06!GO:0006413;translational initiation;2.42421991976238e-06!GO:0004386;helicase activity;2.48644328435721e-06!GO:0042623;ATPase activity, coupled;2.56799492551754e-06!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.59009441540918e-06!GO:0050136;NADH dehydrogenase (quinone) activity;2.75594593608267e-06!GO:0003954;NADH dehydrogenase activity;2.75594593608267e-06!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.75594593608267e-06!GO:0003779;actin binding;2.75594593608267e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.90541826718201e-06!GO:0005793;ER-Golgi intermediate compartment;2.90988735014712e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.11434088592764e-06!GO:0006606;protein import into nucleus;3.15204593756755e-06!GO:0007049;cell cycle;4.09014843256331e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;4.09014843256331e-06!GO:0016044;membrane organization and biogenesis;4.59022828041393e-06!GO:0050657;nucleic acid transport;4.69141712362628e-06!GO:0051236;establishment of RNA localization;4.69141712362628e-06!GO:0050658;RNA transport;4.69141712362628e-06!GO:0030695;GTPase regulator activity;4.70311369116372e-06!GO:0044455;mitochondrial membrane part;4.70311369116372e-06!GO:0005746;mitochondrial respiratory chain;4.72900908008414e-06!GO:0006403;RNA localization;5.50097909828357e-06!GO:0051170;nuclear import;5.89550600751284e-06!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.57747522783772e-06!GO:0048522;positive regulation of cellular process;7.45535579933457e-06!GO:0051674;localization of cell;9.25169167346838e-06!GO:0006928;cell motility;9.25169167346838e-06!GO:0006897;endocytosis;1.04738253368014e-05!GO:0010324;membrane invagination;1.04738253368014e-05!GO:0042981;regulation of apoptosis;1.05144776151579e-05!GO:0019829;cation-transporting ATPase activity;1.17648341787015e-05!GO:0008026;ATP-dependent helicase activity;1.18953797346873e-05!GO:0006323;DNA packaging;1.2463621552989e-05!GO:0016568;chromatin modification;1.29250644890286e-05!GO:0044431;Golgi apparatus part;1.39970650738572e-05!GO:0043067;regulation of programmed cell death;1.73965917865654e-05!GO:0044432;endoplasmic reticulum part;1.87365538951707e-05!GO:0051128;regulation of cellular component organization and biogenesis;1.97327119800966e-05!GO:0043566;structure-specific DNA binding;2.23316052922137e-05!GO:0007242;intracellular signaling cascade;2.26253679310089e-05!GO:0042775;organelle ATP synthesis coupled electron transport;2.45766827923423e-05!GO:0042773;ATP synthesis coupled electron transport;2.45766827923423e-05!GO:0048518;positive regulation of biological process;2.55165124840781e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.68003896808265e-05!GO:0044453;nuclear membrane part;3.02599581294336e-05!GO:0031980;mitochondrial lumen;3.46250456999456e-05!GO:0005759;mitochondrial matrix;3.46250456999456e-05!GO:0048475;coated membrane;3.5717550731785e-05!GO:0030117;membrane coat;3.5717550731785e-05!GO:0045893;positive regulation of transcription, DNA-dependent;3.76603024201223e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.84697609283875e-05!GO:0030964;NADH dehydrogenase complex (quinone);3.87424598804619e-05!GO:0045271;respiratory chain complex I;3.87424598804619e-05!GO:0005747;mitochondrial respiratory chain complex I;3.87424598804619e-05!GO:0015986;ATP synthesis coupled proton transport;3.98308916313587e-05!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.98308916313587e-05!GO:0000074;regulation of progression through cell cycle;4.21886617713374e-05!GO:0032446;protein modification by small protein conjugation;4.36591350771269e-05!GO:0006613;cotranslational protein targeting to membrane;4.45414360004877e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.587546288089e-05!GO:0044248;cellular catabolic process;4.65575451646722e-05!GO:0051726;regulation of cell cycle;4.76990447324348e-05!GO:0005083;small GTPase regulator activity;4.85154785245512e-05!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.07842618393966e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.20215528730033e-05!GO:0005773;vacuole;5.28497986834925e-05!GO:0030120;vesicle coat;5.32891163865747e-05!GO:0030662;coated vesicle membrane;5.32891163865747e-05!GO:0005813;centrosome;7.50665190482698e-05!GO:0051028;mRNA transport;7.50665190482698e-05!GO:0045892;negative regulation of transcription, DNA-dependent;8.20567531229056e-05!GO:0005643;nuclear pore;8.78388785151177e-05!GO:0005525;GTP binding;8.8839714110201e-05!GO:0003924;GTPase activity;9.2433004311575e-05!GO:0016567;protein ubiquitination;0.000102684744984348!GO:0045333;cellular respiration;0.000103997280154578!GO:0005667;transcription factor complex;0.000105554531039844!GO:0001944;vasculature development;0.000107798506933932!GO:0005770;late endosome;0.000114866301468442!GO:0005096;GTPase activator activity;0.000117474246684407!GO:0045941;positive regulation of transcription;0.00011857468542453!GO:0051270;regulation of cell motility;0.000121628352866673!GO:0009966;regulation of signal transduction;0.000128853502635194!GO:0001568;blood vessel development;0.000130483023978445!GO:0007167;enzyme linked receptor protein signaling pathway;0.000141313019076077!GO:0000245;spliceosome assembly;0.00014555782351833!GO:0042802;identical protein binding;0.000145689377255825!GO:0031323;regulation of cellular metabolic process;0.000154476993098285!GO:0051276;chromosome organization and biogenesis;0.000156096265798464!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000178085010767663!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000178085010767663!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000197997990552096!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000197997990552096!GO:0001666;response to hypoxia;0.000203370587572798!GO:0009142;nucleoside triphosphate biosynthetic process;0.000203619741483149!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000203619741483149!GO:0051427;hormone receptor binding;0.000204321137880273!GO:0000323;lytic vacuole;0.000204321137880273!GO:0005764;lysosome;0.000204321137880273!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000221998161300463!GO:0003724;RNA helicase activity;0.000225138194869272!GO:0008154;actin polymerization and/or depolymerization;0.000239916578551142!GO:0016469;proton-transporting two-sector ATPase complex;0.00024745427268626!GO:0040012;regulation of locomotion;0.000288489936158751!GO:0006974;response to DNA damage stimulus;0.000294693325809088!GO:0009060;aerobic respiration;0.000296463093171552!GO:0030027;lamellipodium;0.00030040213459416!GO:0007169;transmembrane receptor protein tyrosine kinase signaling pathway;0.000309887097916888!GO:0044440;endosomal part;0.000315206101245385!GO:0010008;endosome membrane;0.000315206101245385!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;0.000319002730190412!GO:0035257;nuclear hormone receptor binding;0.000341242010464963!GO:0000139;Golgi membrane;0.00036764947122631!GO:0046930;pore complex;0.000381092797316794!GO:0040011;locomotion;0.000386445406557325!GO:0005815;microtubule organizing center;0.000411506554311627!GO:0007265;Ras protein signal transduction;0.000417789343989786!GO:0032561;guanyl ribonucleotide binding;0.000425163258295574!GO:0019001;guanyl nucleotide binding;0.000425163258295574!GO:0008047;enzyme activator activity;0.000427544713124063!GO:0003690;double-stranded DNA binding;0.000449514622561763!GO:0000151;ubiquitin ligase complex;0.000450790190666775!GO:0003697;single-stranded DNA binding;0.000497482705023661!GO:0045259;proton-transporting ATP synthase complex;0.000497482705023661!GO:0009205;purine ribonucleoside triphosphate metabolic process;0.000502057572068917!GO:0009144;purine nucleoside triphosphate metabolic process;0.000502057572068917!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000502057572068917!GO:0048514;blood vessel morphogenesis;0.000512812730923497!GO:0051186;cofactor metabolic process;0.000514166464553278!GO:0009199;ribonucleoside triphosphate metabolic process;0.000553006964555183!GO:0008361;regulation of cell size;0.000582157120779889!GO:0005798;Golgi-associated vesicle;0.000583010591445355!GO:0010468;regulation of gene expression;0.000586065018228158!GO:0006754;ATP biosynthetic process;0.000652582219272708!GO:0006753;nucleoside phosphate metabolic process;0.000652582219272708!GO:0048471;perinuclear region of cytoplasm;0.000722876586815052!GO:0016049;cell growth;0.000745950365067885!GO:0006402;mRNA catabolic process;0.0007803633403708!GO:0030532;small nuclear ribonucleoprotein complex;0.000813460012379729!GO:0009141;nucleoside triphosphate metabolic process;0.000850168871793483!GO:0030133;transport vesicle;0.000864751103029431!GO:0016197;endosome transport;0.000871714432875594!GO:0030100;regulation of endocytosis;0.000882880583994572!GO:0009150;purine ribonucleotide metabolic process;0.000883775253234306!GO:0009152;purine ribonucleotide biosynthetic process;0.000902706097011817!GO:0001726;ruffle;0.000958196764556377!GO:0006350;transcription;0.000970948321969384!GO:0051789;response to protein stimulus;0.000979038878460878!GO:0006986;response to unfolded protein;0.000979038878460878!GO:0009259;ribonucleotide metabolic process;0.000990853947426277!GO:0006099;tricarboxylic acid cycle;0.00103996283951533!GO:0046356;acetyl-CoA catabolic process;0.00103996283951533!GO:0009719;response to endogenous stimulus;0.00107156680996769!GO:0016301;kinase activity;0.00112241280218517!GO:0022402;cell cycle process;0.00119553927801056!GO:0016363;nuclear matrix;0.00121664483424154!GO:0006612;protein targeting to membrane;0.00123602346318907!GO:0005912;adherens junction;0.00128270519602376!GO:0008286;insulin receptor signaling pathway;0.00140680358520389!GO:0003702;RNA polymerase II transcription factor activity;0.00140680358520389!GO:0015629;actin cytoskeleton;0.001421429095533!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00147476559595575!GO:0065009;regulation of a molecular function;0.00148313708286725!GO:0006163;purine nucleotide metabolic process;0.00154092320483726!GO:0005788;endoplasmic reticulum lumen;0.00154092320483726!GO:0005856;cytoskeleton;0.001593214684424!GO:0009260;ribonucleotide biosynthetic process;0.00161479025624441!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.00167043952884238!GO:0006164;purine nucleotide biosynthetic process;0.00168969174779629!GO:0005938;cell cortex;0.00175870885951277!GO:0001525;angiogenesis;0.00177639766542798!GO:0048468;cell development;0.00186940633864971!GO:0030867;rough endoplasmic reticulum membrane;0.00197326872864892!GO:0000902;cell morphogenesis;0.00197326872864892!GO:0032989;cellular structure morphogenesis;0.00197326872864892!GO:0005791;rough endoplasmic reticulum;0.00204043322523943!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00206026371705198!GO:0005100;Rho GTPase activator activity;0.00206026371705198!GO:0030521;androgen receptor signaling pathway;0.00208626069984664!GO:0005789;endoplasmic reticulum membrane;0.00209869696109267!GO:0046034;ATP metabolic process;0.00210363125108533!GO:0030041;actin filament polymerization;0.00212081420255994!GO:0001558;regulation of cell growth;0.00219069743190237!GO:0006468;protein amino acid phosphorylation;0.00235987300816547!GO:0051168;nuclear export;0.00241808205357313!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00260912004522108!GO:0030323;respiratory tube development;0.00264660378966855!GO:0051271;negative regulation of cell motility;0.00280937472576797!GO:0008186;RNA-dependent ATPase activity;0.00302215147792451!GO:0030334;regulation of cell migration;0.00305654435747646!GO:0006333;chromatin assembly or disassembly;0.00319265451856993!GO:0065002;intracellular protein transport across a membrane;0.00327057764056172!GO:0030218;erythrocyte differentiation;0.00327057764056172!GO:0030324;lung development;0.00336863901766186!GO:0030134;ER to Golgi transport vesicle;0.00336863901766186!GO:0005769;early endosome;0.00343166817365753!GO:0008250;oligosaccharyl transferase complex;0.00343520244285579!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00356857284954523!GO:0045045;secretory pathway;0.00364188490177753!GO:0003729;mRNA binding;0.00373176931128999!GO:0005761;mitochondrial ribosome;0.00381517806563689!GO:0000313;organellar ribosome;0.00381517806563689!GO:0019843;rRNA binding;0.00402816305463352!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00403696517464381!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00404391331171834!GO:0033043;regulation of organelle organization and biogenesis;0.00404391331171834!GO:0017091;AU-rich element binding;0.00426059716400067!GO:0050779;RNA destabilization;0.00426059716400067!GO:0000289;poly(A) tail shortening;0.00426059716400067!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00430061457105343!GO:0016859;cis-trans isomerase activity;0.0043329538159747!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00441497674295031!GO:0006084;acetyl-CoA metabolic process;0.00442266221476766!GO:0030518;steroid hormone receptor signaling pathway;0.00444304468795211!GO:0006281;DNA repair;0.00456549360420654!GO:0006607;NLS-bearing substrate import into nucleus;0.00468342687731855!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00470753759170906!GO:0030286;dynein complex;0.00479001032962096!GO:0004672;protein kinase activity;0.00501828480566557!GO:0033673;negative regulation of kinase activity;0.00501828480566557!GO:0006469;negative regulation of protein kinase activity;0.00501828480566557!GO:0030127;COPII vesicle coat;0.00516466352408589!GO:0012507;ER to Golgi transport vesicle membrane;0.00516466352408589!GO:0004674;protein serine/threonine kinase activity;0.00547027390484867!GO:0009893;positive regulation of metabolic process;0.00555750417989857!GO:0009055;electron carrier activity;0.00613039339043207!GO:0051252;regulation of RNA metabolic process;0.00614434895124897!GO:0051920;peroxiredoxin activity;0.00625093691641857!GO:0065004;protein-DNA complex assembly;0.00634503360727935!GO:0005581;collagen;0.00636812555000467!GO:0048500;signal recognition particle;0.00636812780326057!GO:0008234;cysteine-type peptidase activity;0.00636812780326057!GO:0032774;RNA biosynthetic process;0.00641045458166313!GO:0004576;oligosaccharyl transferase activity;0.00649995002157725!GO:0008283;cell proliferation;0.00654964366436626!GO:0009109;coenzyme catabolic process;0.0067202573764282!GO:0006351;transcription, DNA-dependent;0.00684966024831495!GO:0044420;extracellular matrix part;0.00707786176507426!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00711588990298873!GO:0007266;Rho protein signal transduction;0.00713300977068581!GO:0035258;steroid hormone receptor binding;0.00714799684946806!GO:0030118;clathrin coat;0.00735443703125653!GO:0015078;hydrogen ion transmembrane transporter activity;0.00754087578669425!GO:0030031;cell projection biogenesis;0.00757002118907434!GO:0030155;regulation of cell adhesion;0.00770190411465361!GO:0008654;phospholipid biosynthetic process;0.00772465474652736!GO:0040013;negative regulation of locomotion;0.00773257837458835!GO:0004004;ATP-dependent RNA helicase activity;0.00793681225645732!GO:0048646;anatomical structure formation;0.00811227625283231!GO:0019904;protein domain specific binding;0.00811269925847304!GO:0006732;coenzyme metabolic process;0.00837927855244198!GO:0005839;proteasome core complex (sensu Eukaryota);0.00865733434038859!GO:0051187;cofactor catabolic process;0.00865733434038859!GO:0042254;ribosome biogenesis and assembly;0.00883357988451876!GO:0060090;molecular adaptor activity;0.00887646239423279!GO:0032940;secretion by cell;0.00957934811624813!GO:0051087;chaperone binding;0.0100295980705022!GO:0005099;Ras GTPase activator activity;0.0100575137438275!GO:0045449;regulation of transcription;0.0101182180664419!GO:0043021;ribonucleoprotein binding;0.0104371917616053!GO:0017166;vinculin binding;0.0107333508499729!GO:0004298;threonine endopeptidase activity;0.0111135726573163!GO:0001725;stress fiber;0.0114561553712176!GO:0032432;actin filament bundle;0.0114561553712176!GO:0005874;microtubule;0.011722849987595!GO:0045792;negative regulation of cell size;0.0124795005504175!GO:0051348;negative regulation of transferase activity;0.012622367065653!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.0130546255427438!GO:0004812;aminoacyl-tRNA ligase activity;0.0130546255427438!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.0130546255427438!GO:0050900;leukocyte migration;0.0131102255797679!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0131621119631849!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0136003075838035!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0136076261977657!GO:0045047;protein targeting to ER;0.0136076261977657!GO:0007050;cell cycle arrest;0.0136076261977657!GO:0051338;regulation of transferase activity;0.0137189351337874!GO:0009967;positive regulation of signal transduction;0.0141922886755028!GO:0000785;chromatin;0.0142084639099936!GO:0030336;negative regulation of cell migration;0.014323466967756!GO:0005905;coated pit;0.0143600549421811!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0143600549421811!GO:0015399;primary active transmembrane transporter activity;0.0143600549421811!GO:0043549;regulation of kinase activity;0.0146657452039164!GO:0009056;catabolic process;0.0146657452039164!GO:0051188;cofactor biosynthetic process;0.0146657452039164!GO:0032535;regulation of cellular component size;0.0146657452039164!GO:0043038;amino acid activation;0.0146657452039164!GO:0006418;tRNA aminoacylation for protein translation;0.0146657452039164!GO:0043039;tRNA aminoacylation;0.0146657452039164!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0147583379857729!GO:0043488;regulation of mRNA stability;0.015443170725104!GO:0043487;regulation of RNA stability;0.015443170725104!GO:0006891;intra-Golgi vesicle-mediated transport;0.0154861120404582!GO:0030658;transport vesicle membrane;0.0160676800381819!GO:0012506;vesicle membrane;0.0163218430119982!GO:0045926;negative regulation of growth;0.0165293888587049!GO:0030308;negative regulation of cell growth;0.0167514307379375!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0169999051018963!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0173152853718327!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0175167320811148!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0175167320811148!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0175167320811148!GO:0006401;RNA catabolic process;0.0175167320811148!GO:0006417;regulation of translation;0.0182165308766187!GO:0031589;cell-substrate adhesion;0.0182331321667905!GO:0044448;cell cortex part;0.0184513857344445!GO:0030659;cytoplasmic vesicle membrane;0.0184784562136977!GO:0006892;post-Golgi vesicle-mediated transport;0.0186269624700368!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0187045943410632!GO:0030832;regulation of actin filament length;0.0190264071165401!GO:0030522;intracellular receptor-mediated signaling pathway;0.0194727949767105!GO:0006260;DNA replication;0.0195396007876153!GO:0043407;negative regulation of MAP kinase activity;0.0195396007876153!GO:0043623;cellular protein complex assembly;0.0195791753821592!GO:0050811;GABA receptor binding;0.019849609728001!GO:0031901;early endosome membrane;0.0209038077687863!GO:0040008;regulation of growth;0.0215183983657922!GO:0005885;Arp2/3 protein complex;0.0220516928506772!GO:0016791;phosphoric monoester hydrolase activity;0.0222080518633945!GO:0050790;regulation of catalytic activity;0.0222128081141361!GO:0050681;androgen receptor binding;0.0222766598366688!GO:0031625;ubiquitin protein ligase binding;0.0222766669098875!GO:0043492;ATPase activity, coupled to movement of substances;0.0225001301000582!GO:0051015;actin filament binding;0.0228673833116305!GO:0016584;nucleosome positioning;0.0234485494624258!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0235235566735863!GO:0030139;endocytic vesicle;0.0238753715099604!GO:0022603;regulation of anatomical structure morphogenesis;0.0239220405425107!GO:0008360;regulation of cell shape;0.0239220405425107!GO:0022604;regulation of cell morphogenesis;0.0239220405425107!GO:0006355;regulation of transcription, DNA-dependent;0.0250969002149552!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0260549891912778!GO:0006752;group transfer coenzyme metabolic process;0.0266925088216607!GO:0031902;late endosome membrane;0.0272813332563915!GO:0018196;peptidyl-asparagine modification;0.0274389715194088!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0274389715194088!GO:0008312;7S RNA binding;0.0275334344123928!GO:0007160;cell-matrix adhesion;0.0284054700896133!GO:0045859;regulation of protein kinase activity;0.0284528285740048!GO:0005521;lamin binding;0.0290661396910625!GO:0005875;microtubule associated complex;0.0302806448216239!GO:0044433;cytoplasmic vesicle part;0.0307616533891672!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0312705494046582!GO:0008139;nuclear localization sequence binding;0.0325218532827751!GO:0008147;structural constituent of bone;0.0328741549304087!GO:0005048;signal sequence binding;0.0330826314118793!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0331653708535258!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0332074129324146!GO:0015980;energy derivation by oxidation of organic compounds;0.033745946867776!GO:0005586;collagen type III;0.0338121418598547!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0342726251453062!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.0344206531085908!GO:0004860;protein kinase inhibitor activity;0.034695912813482!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0351056018022378!GO:0046983;protein dimerization activity;0.0352082098667034!GO:0030384;phosphoinositide metabolic process;0.0353966454774133!GO:0003682;chromatin binding;0.0354482906041106!GO:0051101;regulation of DNA binding;0.0356850696955178!GO:0033116;ER-Golgi intermediate compartment membrane;0.035960207470014!GO:0035035;histone acetyltransferase binding;0.0360006852274862!GO:0043034;costamere;0.0370641756277576!GO:0007034;vacuolar transport;0.0370808146654661!GO:0043087;regulation of GTPase activity;0.0371957388098104!GO:0005583;fibrillar collagen;0.0382559384539052!GO:0030660;Golgi-associated vesicle membrane;0.0387459762617768!GO:0001516;prostaglandin biosynthetic process;0.0387459762617768!GO:0046457;prostanoid biosynthetic process;0.0387459762617768!GO:0030099;myeloid cell differentiation;0.0390239999431358!GO:0016740;transferase activity;0.0396765800122668!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0399111189573565!GO:0005925;focal adhesion;0.0400123645746075!GO:0015631;tubulin binding;0.0414885389756077!GO:0031325;positive regulation of cellular metabolic process;0.0418974354484616!GO:0006376;mRNA splice site selection;0.0440546359912327!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0440546359912327!GO:0045637;regulation of myeloid cell differentiation;0.0441530322811237!GO:0019902;phosphatase binding;0.0442228177650137!GO:0001887;selenium metabolic process;0.0449379552948591!GO:0030055;cell-matrix junction;0.0456630115646989!GO:0006611;protein export from nucleus;0.0461615865120603!GO:0008097;5S rRNA binding;0.0461617464001686!GO:0000059;protein import into nucleus, docking;0.0471033125952322!GO:0001635;calcitonin gene-related polypeptide receptor activity;0.0472776790566741!GO:0004197;cysteine-type endopeptidase activity;0.0475069724284979!GO:0048487;beta-tubulin binding;0.0483347261789109!GO:0007015;actin filament organization;0.0485513624393808!GO:0045197;establishment and/or maintenance of epithelial cell polarity;0.0489163339492792!GO:0031072;heat shock protein binding;0.0498956674752127 | |||
|sample_id=10068 | |sample_id=10068 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=lung | |sample_tissue=lung | ||
|top_motifs=FOX{I1,J2}:3.81730145131;FOX{D1,D2}:3.64193399616;HBP1_HMGB_SSRP1_UBTF:3.09255710773;RFX2..5_RFXANK_RFXAP:2.99756746135;RBPJ:2.78995437934;FOX{F1,F2,J1}:2.68950224068;EP300:2.6740494614;MAZ:2.64279231827;RFX1:2.59556600185;MZF1:2.56395554445;GATA6:2.51774520031;TLX2:2.47802686068;TBX4,5:2.34153046325;BPTF:2.32600549755;STAT2,4,6:2.23566287867;NFATC1..3:2.15857074591;NANOG:2.13005051946;FOXA2:2.11934971431;SP1:2.077286932;SPZ1:1.9975057303;PRDM1:1.95999433544;STAT1,3:1.95325631593;FOXN1:1.92620082838;TLX1..3_NFIC{dimer}:1.87146884896;HMX1:1.84209510009;MED-1{core}:1.80771144089;SRF:1.74913897037;TGIF1:1.70205228068;FOXO1,3,4:1.62436939924;PATZ1:1.62344712742;SMAD1..7,9:1.6176531007;AR:1.61206196931;FOXQ1:1.5981546376;NKX2-1,4:1.57927673935;GTF2I:1.57838632462;HAND1,2:1.53322862497;TBP:1.50894238917;XBP1:1.50648736588;NKX3-2:1.50605053984;MYFfamily:1.46381100206;MYBL2:1.4153692744;ATF2:1.36577043226;ZNF238:1.32468454888;SOX2:1.24986866623;MTE{core}:1.19452955715;CDC5L:1.13183549093;T:1.10069349232;GZF1:1.09944197809;JUN:1.09392822959;MEF2{A,B,C,D}:1.08973882858;TFAP2{A,C}:1.08099304745;ZFP161:1.06641948503;RREB1:1.06063054335;TEAD1:1.03513531966;ETS1,2:1.00704662666;PBX1:0.996640810626;SOX5:0.992767756612;XCPE1{core}:0.979417520609;EGR1..3:0.977847156671;NFIX:0.959782253946;SNAI1..3:0.936985750033;DBP:0.894351617483;NR6A1:0.875291614385;GCM1,2:0.864248450823;GFI1:0.836254239126;GFI1B:0.809300765584;ALX1:0.786390626381;HIC1:0.780198627595;TFAP4:0.779490892132;NHLH1,2:0.734607180097;IRF7:0.734290913311;POU3F1..4:0.728922194116;TFCP2:0.709450193728;PAX5:0.671675240303;ZEB1:0.657626840232;IKZF2:0.653090938138;EBF1:0.644236474934;SOX{8,9,10}:0.616598621055;LEF1_TCF7_TCF7L1,2:0.614498891824;IRF1,2:0.610228285593;HNF1A:0.609727244878;PAX6:0.593653014952;MTF1:0.588935356184;ZIC1..3:0.580161683562;CREB1:0.564680688931;ZNF148:0.550532556385;NR3C1:0.526854158924;FOXP1:0.519509666646;HSF1,2:0.505443829685;BREu{core}:0.490701931605;SOX17:0.475370453659;ATF4:0.469167637871;TEF:0.431193016759;NKX3-1:0.399652915484;GLI1..3:0.389416703102;ELF1,2,4:0.383628469343;CDX1,2,4:0.378894709748;HIF1A:0.376022584818;LMO2:0.370846726273;SPIB:0.366594153666;ZNF423:0.349365842631;IKZF1:0.343857422984;HMGA1,2:0.33619224677;NR1H4:0.304683914878;KLF4:0.293647618088;MYOD1:0.289260950841;AHR_ARNT_ARNT2:0.274664761102;ATF6:0.272193442771;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.26150224383;GATA4:0.239787254416;FOXD3:0.22833970977;TFAP2B:0.219328801472;FOXP3:0.194531520116;CUX2:0.146722536673;NFIL3:0.138772404669;NFKB1_REL_RELA:0.125674805413;ZNF384:0.120411811749;NRF1:0.103988337647;PAX2:0.103793567681;FOXL1:0.0986964271347;SPI1:0.0980925217424;GTF2A1,2:0.0943186915631;RXR{A,B,G}:0.0519460014267;NKX2-3_NKX2-5:0.0439448042741;POU6F1:0.0427781020859;CEBPA,B_DDIT3:0.0397081589579;NANOG{mouse}:0.0364355767091;DMAP1_NCOR{1,2}_SMARC:0.0203446511079;ESR1:0.00721466754893;HNF4A_NR2F1,2:0.000302048738372;SREBF1,2:-0.0277560877455;MAFB:-0.0331387302681;ZNF143:-0.0371531828899;HLF:-0.0384878834966;STAT5{A,B}:-0.0535397218124;PRRX1,2:-0.0598708543642;REST:-0.0826791398865;ATF5_CREB3:-0.0829458785486;TAL1_TCF{3,4,12}:-0.0918736136554;ZBTB6:-0.112921185653;ALX4:-0.163963023834;HOX{A6,A7,B6,B7}:-0.167720919779;ADNP_IRX_SIX_ZHX:-0.195213092372;MYB:-0.19571452293;PAX8:-0.206325705869;FOSL2:-0.236103253977;RUNX1..3:-0.304469682947;HOX{A5,B5}:-0.316501348113;RORA:-0.367908919364;POU2F1..3:-0.392967752771;NKX6-1,2:-0.446539991115;TP53:-0.458561751906;AIRE:-0.486390147045;NFY{A,B,C}:-0.505108353586;PPARG:-0.514686339345;ARID5B:-0.514718683957;POU5F1:-0.544064665655;NR5A1,2:-0.544952821523;HOX{A4,D4}:-0.548706971209;FOS_FOS{B,L1}_JUN{B,D}:-0.57106382556;E2F1..5:-0.581139031084;NFE2:-0.613833491397;ESRRA:-0.62078696375;HES1:-0.623869048899;VSX1,2:-0.625632381165;NKX2-2,8:-0.653361268497;TOPORS:-0.690008825087;PAX3,7:-0.718039125094;BACH2:-0.729416204799;NFE2L1:-0.732059413127;FOXM1:-0.768676656078;PDX1:-0.7838536865;UFEwm:-0.788054833406;POU1F1:-0.802963275754;RXRA_VDR{dimer}:-0.865475812693;LHX3,4:-0.881902029971;bHLH_family:-0.886428407514;CRX:-0.89462367732;TFDP1:-0.903811411877;PITX1..3:-0.923178594085;PAX1,9:-1.01307254814;ELK1,4_GABP{A,B1}:-1.01556744759;ZBTB16:-1.0299128597;HOXA9_MEIS1:-1.06573547763;NFE2L2:-1.0850308931;PAX4:-1.13939622071;OCT4_SOX2{dimer}:-1.14266828815;EN1,2:-1.45010012557;YY1:-1.52844708996;ONECUT1,2:-1.52964217226;EVI1:-1.69134509096;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.84523130317 | |top_motifs=FOX{I1,J2}:3.81730145131;FOX{D1,D2}:3.64193399616;HBP1_HMGB_SSRP1_UBTF:3.09255710773;RFX2..5_RFXANK_RFXAP:2.99756746135;RBPJ:2.78995437934;FOX{F1,F2,J1}:2.68950224068;EP300:2.6740494614;MAZ:2.64279231827;RFX1:2.59556600185;MZF1:2.56395554445;GATA6:2.51774520031;TLX2:2.47802686068;TBX4,5:2.34153046325;BPTF:2.32600549755;STAT2,4,6:2.23566287867;NFATC1..3:2.15857074591;NANOG:2.13005051946;FOXA2:2.11934971431;SP1:2.077286932;SPZ1:1.9975057303;PRDM1:1.95999433544;STAT1,3:1.95325631593;FOXN1:1.92620082838;TLX1..3_NFIC{dimer}:1.87146884896;HMX1:1.84209510009;MED-1{core}:1.80771144089;SRF:1.74913897037;TGIF1:1.70205228068;FOXO1,3,4:1.62436939924;PATZ1:1.62344712742;SMAD1..7,9:1.6176531007;AR:1.61206196931;FOXQ1:1.5981546376;NKX2-1,4:1.57927673935;GTF2I:1.57838632462;HAND1,2:1.53322862497;TBP:1.50894238917;XBP1:1.50648736588;NKX3-2:1.50605053984;MYFfamily:1.46381100206;MYBL2:1.4153692744;ATF2:1.36577043226;ZNF238:1.32468454888;SOX2:1.24986866623;MTE{core}:1.19452955715;CDC5L:1.13183549093;T:1.10069349232;GZF1:1.09944197809;JUN:1.09392822959;MEF2{A,B,C,D}:1.08973882858;TFAP2{A,C}:1.08099304745;ZFP161:1.06641948503;RREB1:1.06063054335;TEAD1:1.03513531966;ETS1,2:1.00704662666;PBX1:0.996640810626;SOX5:0.992767756612;XCPE1{core}:0.979417520609;EGR1..3:0.977847156671;NFIX:0.959782253946;SNAI1..3:0.936985750033;DBP:0.894351617483;NR6A1:0.875291614385;GCM1,2:0.864248450823;GFI1:0.836254239126;GFI1B:0.809300765584;ALX1:0.786390626381;HIC1:0.780198627595;TFAP4:0.779490892132;NHLH1,2:0.734607180097;IRF7:0.734290913311;POU3F1..4:0.728922194116;TFCP2:0.709450193728;PAX5:0.671675240303;ZEB1:0.657626840232;IKZF2:0.653090938138;EBF1:0.644236474934;SOX{8,9,10}:0.616598621055;LEF1_TCF7_TCF7L1,2:0.614498891824;IRF1,2:0.610228285593;HNF1A:0.609727244878;PAX6:0.593653014952;MTF1:0.588935356184;ZIC1..3:0.580161683562;CREB1:0.564680688931;ZNF148:0.550532556385;NR3C1:0.526854158924;FOXP1:0.519509666646;HSF1,2:0.505443829685;BREu{core}:0.490701931605;SOX17:0.475370453659;ATF4:0.469167637871;TEF:0.431193016759;NKX3-1:0.399652915484;GLI1..3:0.389416703102;ELF1,2,4:0.383628469343;CDX1,2,4:0.378894709748;HIF1A:0.376022584818;LMO2:0.370846726273;SPIB:0.366594153666;ZNF423:0.349365842631;IKZF1:0.343857422984;HMGA1,2:0.33619224677;NR1H4:0.304683914878;KLF4:0.293647618088;MYOD1:0.289260950841;AHR_ARNT_ARNT2:0.274664761102;ATF6:0.272193442771;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.26150224383;GATA4:0.239787254416;FOXD3:0.22833970977;TFAP2B:0.219328801472;FOXP3:0.194531520116;CUX2:0.146722536673;NFIL3:0.138772404669;NFKB1_REL_RELA:0.125674805413;ZNF384:0.120411811749;NRF1:0.103988337647;PAX2:0.103793567681;FOXL1:0.0986964271347;SPI1:0.0980925217424;GTF2A1,2:0.0943186915631;RXR{A,B,G}:0.0519460014267;NKX2-3_NKX2-5:0.0439448042741;POU6F1:0.0427781020859;CEBPA,B_DDIT3:0.0397081589579;NANOG{mouse}:0.0364355767091;DMAP1_NCOR{1,2}_SMARC:0.0203446511079;ESR1:0.00721466754893;HNF4A_NR2F1,2:0.000302048738372;SREBF1,2:-0.0277560877455;MAFB:-0.0331387302681;ZNF143:-0.0371531828899;HLF:-0.0384878834966;STAT5{A,B}:-0.0535397218124;PRRX1,2:-0.0598708543642;REST:-0.0826791398865;ATF5_CREB3:-0.0829458785486;TAL1_TCF{3,4,12}:-0.0918736136554;ZBTB6:-0.112921185653;ALX4:-0.163963023834;HOX{A6,A7,B6,B7}:-0.167720919779;ADNP_IRX_SIX_ZHX:-0.195213092372;MYB:-0.19571452293;PAX8:-0.206325705869;FOSL2:-0.236103253977;RUNX1..3:-0.304469682947;HOX{A5,B5}:-0.316501348113;RORA:-0.367908919364;POU2F1..3:-0.392967752771;NKX6-1,2:-0.446539991115;TP53:-0.458561751906;AIRE:-0.486390147045;NFY{A,B,C}:-0.505108353586;PPARG:-0.514686339345;ARID5B:-0.514718683957;POU5F1:-0.544064665655;NR5A1,2:-0.544952821523;HOX{A4,D4}:-0.548706971209;FOS_FOS{B,L1}_JUN{B,D}:-0.57106382556;E2F1..5:-0.581139031084;NFE2:-0.613833491397;ESRRA:-0.62078696375;HES1:-0.623869048899;VSX1,2:-0.625632381165;NKX2-2,8:-0.653361268497;TOPORS:-0.690008825087;PAX3,7:-0.718039125094;BACH2:-0.729416204799;NFE2L1:-0.732059413127;FOXM1:-0.768676656078;PDX1:-0.7838536865;UFEwm:-0.788054833406;POU1F1:-0.802963275754;RXRA_VDR{dimer}:-0.865475812693;LHX3,4:-0.881902029971;bHLH_family:-0.886428407514;CRX:-0.89462367732;TFDP1:-0.903811411877;PITX1..3:-0.923178594085;PAX1,9:-1.01307254814;ELK1,4_GABP{A,B1}:-1.01556744759;ZBTB16:-1.0299128597;HOXA9_MEIS1:-1.06573547763;NFE2L2:-1.0850308931;PAX4:-1.13939622071;OCT4_SOX2{dimer}:-1.14266828815;EN1,2:-1.45010012557;YY1:-1.52844708996;ONECUT1,2:-1.52964217226;EVI1:-1.69134509096;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.84523130317 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10068-101I5;search_select_hide=table117:FF:10068-101I5 | |||
}} | }} | ||
Latest revision as of 12:19, 3 June 2020
| Name: | lung, fetal, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11680 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11680
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11680
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0111 |
| 10 | 10 | 0.0193 |
| 100 | 100 | 0.247 |
| 101 | 101 | 0.753 |
| 102 | 102 | 0.407 |
| 103 | 103 | 0.385 |
| 104 | 104 | 0.796 |
| 105 | 105 | 0.596 |
| 106 | 106 | 0.182 |
| 107 | 107 | 0.695 |
| 108 | 108 | 0.262 |
| 109 | 109 | 0.00595 |
| 11 | 11 | 0.0282 |
| 110 | 110 | 0.132 |
| 111 | 111 | 0.00337 |
| 112 | 112 | 0.703 |
| 113 | 113 | 0.381 |
| 114 | 114 | 0.0194 |
| 115 | 115 | 0.894 |
| 116 | 116 | 0.135 |
| 117 | 117 | 0.00628 |
| 118 | 118 | 0.103 |
| 119 | 119 | 0.056 |
| 12 | 12 | 0.893 |
| 120 | 120 | 0.103 |
| 121 | 121 | 0.467 |
| 122 | 122 | 0.992 |
| 123 | 123 | 0.0435 |
| 124 | 124 | 0.904 |
| 125 | 125 | 0.0366 |
| 126 | 126 | 0.936 |
| 127 | 127 | 0.118 |
| 128 | 128 | 0.279 |
| 129 | 129 | 0.165 |
| 13 | 13 | 0.305 |
| 130 | 130 | 0.568 |
| 131 | 131 | 0.0547 |
| 132 | 132 | 0.604 |
| 133 | 133 | 0.162 |
| 134 | 134 | 0.677 |
| 135 | 135 | 0.108 |
| 136 | 136 | 0.134 |
| 137 | 137 | 0.904 |
| 138 | 138 | 0.495 |
| 139 | 139 | 0.0277 |
| 14 | 14 | 0.944 |
| 140 | 140 | 0.4 |
| 141 | 141 | 0.394 |
| 142 | 142 | 0.433 |
| 143 | 143 | 0.0146 |
| 144 | 144 | 0.687 |
| 145 | 145 | 0.584 |
| 146 | 146 | 0.926 |
| 147 | 147 | 0.694 |
| 148 | 148 | 0.0266 |
| 149 | 149 | 0.643 |
| 15 | 15 | 0.258 |
| 150 | 150 | 0.237 |
| 151 | 151 | 0.434 |
| 152 | 152 | 0.171 |
| 153 | 153 | 0.685 |
| 154 | 154 | 0.649 |
| 155 | 155 | 0.135 |
| 156 | 156 | 0.424 |
| 157 | 157 | 0.801 |
| 158 | 158 | 0.683 |
| 159 | 159 | 0.285 |
| 16 | 16 | 0.116 |
| 160 | 160 | 0.643 |
| 161 | 161 | 0.332 |
| 162 | 162 | 0.663 |
| 163 | 163 | 0.7 |
| 164 | 164 | 0.0574 |
| 165 | 165 | 0.415 |
| 166 | 166 | 0.714 |
| 167 | 167 | 0.00721 |
| 168 | 168 | 0.718 |
| 169 | 169 | 0.00367 |
| 17 | 17 | 0.202 |
| 18 | 18 | 0.0174 |
| 19 | 19 | 0.73 |
| 2 | 2 | 0.504 |
| 20 | 20 | 0.231 |
| 21 | 21 | 0.255 |
| 22 | 22 | 0.47 |
| 23 | 23 | 0.662 |
| 24 | 24 | 0.874 |
| 25 | 25 | 0.523 |
| 26 | 26 | 0.0132 |
| 27 | 27 | 0.496 |
| 28 | 28 | 0.97 |
| 29 | 29 | 0.0315 |
| 3 | 3 | 0.114 |
| 30 | 30 | 0.154 |
| 31 | 31 | 0.594 |
| 32 | 32 | 0.367 |
| 33 | 33 | 0.513 |
| 34 | 34 | 0.615 |
| 35 | 35 | 0.165 |
| 36 | 36 | 0.0247 |
| 37 | 37 | 0.0542 |
| 38 | 38 | 0.497 |
| 39 | 39 | 0.448 |
| 4 | 4 | 0.318 |
| 40 | 40 | 0.0727 |
| 41 | 41 | 0.274 |
| 42 | 42 | 0.411 |
| 43 | 43 | 0.142 |
| 44 | 44 | 0.164 |
| 45 | 45 | 0.504 |
| 46 | 46 | 0.0608 |
| 47 | 47 | 0.0447 |
| 48 | 48 | 0.0596 |
| 49 | 49 | 0.0515 |
| 5 | 5 | 0.753 |
| 50 | 50 | 0.907 |
| 51 | 51 | 0.665 |
| 52 | 52 | 0.557 |
| 53 | 53 | 0.693 |
| 54 | 54 | 0.661 |
| 55 | 55 | 0.665 |
| 56 | 56 | 0.568 |
| 57 | 57 | 0.138 |
| 58 | 58 | 0.635 |
| 59 | 59 | 0.458 |
| 6 | 6 | 0.475 |
| 60 | 60 | 0.858 |
| 61 | 61 | 0.189 |
| 62 | 62 | 0.368 |
| 63 | 63 | 0.308 |
| 64 | 64 | 0.0714 |
| 65 | 65 | 0.39 |
| 66 | 66 | 0.0993 |
| 67 | 67 | 0.584 |
| 68 | 68 | 0.566 |
| 69 | 69 | 0.169 |
| 7 | 7 | 0.743 |
| 70 | 70 | 0.0147 |
| 71 | 71 | 0.0694 |
| 72 | 72 | 0.64 |
| 73 | 73 | 0.0219 |
| 74 | 74 | 0.268 |
| 75 | 75 | 0.00514 |
| 76 | 76 | 0.135 |
| 77 | 77 | 0.573 |
| 78 | 78 | 0.0273 |
| 79 | 79 | 0.266 |
| 8 | 8 | 0.0525 |
| 80 | 80 | 0.162 |
| 81 | 81 | 0.0863 |
| 82 | 82 | 0.241 |
| 83 | 83 | 0.914 |
| 84 | 84 | 0.531 |
| 85 | 85 | 0.322 |
| 86 | 86 | 0.533 |
| 87 | 87 | 8.6695e-4 |
| 88 | 88 | 0.824 |
| 89 | 89 | 0.376 |
| 9 | 9 | 0.769 |
| 90 | 90 | 0.0506 |
| 91 | 91 | 0.98 |
| 92 | 92 | 0.616 |
| 93 | 93 | 0.141 |
| 94 | 94 | 0.071 |
| 95 | 95 | 0.00672 |
| 96 | 96 | 0.287 |
| 97 | 97 | 0.501 |
| 98 | 98 | 0.111 |
| 99 | 99 | 0.456 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11680
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010068 human lung - fetal sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002048 (lung)
0002100 (trunk)
0000479 (tissue)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0005177 (trunk region element)
0000117 (respiratory tube)
0000171 (respiration organ)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010068 (human lung - fetal sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0001041 (foregut)
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)
