FF:10430-106D7: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005362 | |||
|accession_numbers=CAGE;DRX007969;DRR008841;DRZ000266;DRZ001651;DRZ011616;DRZ013001 | |||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
| | |||
|fonse_cell_line=FF:10430-106D7 | |fonse_cell_line=FF:10430-106D7 | ||
|fonse_cell_line_closure=FF:10430-106D7 | |fonse_cell_line_closure=FF:10430-106D7 | ||
| Line 35: | Line 40: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/non%2520T%2520non%2520B%2520acute%2520lymphoblastic%2520leukemia%2520%2528ALL%2529%2520cell%2520line%253aP30%252fOHK.CNhs10747.10430-106D7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/non%2520T%2520non%2520B%2520acute%2520lymphoblastic%2520leukemia%2520%2528ALL%2529%2520cell%2520line%253aP30%252fOHK.CNhs10747.10430-106D7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/non%2520T%2520non%2520B%2520acute%2520lymphoblastic%2520leukemia%2520%2528ALL%2529%2520cell%2520line%253aP30%252fOHK.CNhs10747.10430-106D7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/non%2520T%2520non%2520B%2520acute%2520lymphoblastic%2520leukemia%2520%2528ALL%2529%2520cell%2520line%253aP30%252fOHK.CNhs10747.10430-106D7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/non%2520T%2520non%2520B%2520acute%2520lymphoblastic%2520leukemia%2520%2528ALL%2529%2520cell%2520line%253aP30%252fOHK.CNhs10747.10430-106D7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10430-106D7 | |id=FF:10430-106D7 | ||
|is_a=EFO:0002091;;FF:0000003;;FF:0000210 | |is_a=EFO:0002091;;FF:0000003;;FF:0000210 | ||
|is_obsolete= | |||
|library_id=CNhs10747 | |||
|library_id_phase_based=2:CNhs10747 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10430 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10430 | |||
|name=non T non B acute lymphoblastic leukemia (ALL) cell line:P30/OHK | |name=non T non B acute lymphoblastic leukemia (ALL) cell line:P30/OHK | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 59: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10747,LSID692,release008,COMPLETED | |profile_hcage=CNhs10747,LSID692,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0.0636048451378017,-0.244396338326298,-0.282403560576942,0,0,0,0,0,0,0,0,0,0.119073348236779,0,0,0,-0.153323010348428,0,0,0,0.543150861766,0.119073348236779,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.24193448981415,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.0458103197912346,0,-0.0333875161048034,0,0,-0.0337387820752953,0,0,0,0,0,0,0,0,0,0,0.0329657938672155,0,0,0,0,1.07779590341413,0,0,0,0,0,0,0,0,0.0494729377482737,0.095450365759842,0,0,-0.0236934060972052,0.100592461357563,0,0,0,0.252517463477207,0.0463235937738971,-0.10551140693368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.079890696988853,0.119073348236779,0,0,-0.197386646657653,-0.563109168054301,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.0463235937738971,0,0.252517463477207,0.0636048451378017,0,0,0.190900731519684,0,0,0,0,0,-0.247178875285564,0.0291052694778738,0.438476909115568,-0.110549348656256,0.0164828969336078,0.0329657938672155,-0.331828721149729,0,0,0,0.0247784620102311,0.212425724326828,0.168253004751623,0.144358945011604,0.190900731519684,0.144358945011604,-0.0358958102940543,0,-0.0504125515893149,0,0.0329657938672155,0,0,0,-0.305472230898407,0,-0.142455638580609,-0.0353784672101527,0,0.081006518181469,0,0,-0.270240669334324,0,-0.120879483793741,-0.0191153231856156,0.396904018211025,-0.48514455162266,0.0886464482304216,0,0,0,-0.302046330038371,-0.443172464075763,0,0,0.33027200396847,0.10165094733471,0.0164828969336078,0,-0.391044581551635,0,-0.562333035184863,-0.0928141412665697,0,0.0561726761116924,0,0,0.0329657938672155,0,0,0.46130067514673,0,0,0,0,0,-0.0574934668214365,0.219995026836017,0.108581090537986,0,0,0,0.0228762170667873,0,0,-0.373286155956567,-0.17740791982635,0.229810077233731,0.170448968352568,0,-0.089964002683085,-0.201523357433271,-0.012884660624223,-0.0236934060972052,-0.147401849371139,-0.189981719549847,0.0372572966020535,-0.0590705922677749,0.374656615827106,0.139931707578186,-0.177617794284209,0.0479834604527579,-0.358281952701488,-0.464253664402141,0,0.0329657938672155,-0.0775089264793031,-0.138461504459673,0,0,0.579005445596074,0.0590649500363145,-0.67098743647571,-0.464766177931978,-0.141156348262372,0.15347265804792,-0.0395325284566706,-0.424470659029379,0.0590572814810431,-0.349392852397898,0,0,0.0185805043504914,-0.0451022541912038,-0.533394643630115,0.0344732644276931,0,0.706650046488805,-0.0683442610773682,0,0.073915564136211,0.0333133042558535,0,0,-0.366351506544584,0,0,0.0922240566585104,0,0.30646849450336,0.154199597674626,0.258725850855419,0.150872112956117,0,0.0492986109728436,0.161559767843657,0.323029011274802,0,0.230978529522389,-0.146009897457394,0,-0.200409747937726,0,0.1575251147087,-0.272417995677578,-0.101385851201201,-0.0112408016117012,0.58412205353338,0.457941819330624,0.212480258951386,-0.0407824018589953,-0.576514140463398,0.286846307186623,-0.0881268324752877,0.0636048451378017,0.0494729377482737,-0.325046251404798,-0.00057493807311726,0.55185212232473,0,0.237325926577329,0,0.202313916294447,0,-0.395608573854486,0.96568589390159,1.15973207600184,0.0118412410186837,0,-0.0356053365137666,-0.465071903255835,0,-0.233450880991277,0.0224756756346207,0.252517463477207,0.120888688844342,0.359580175094523,0.283472074666047,0.00562000224223585,0,-0.645721213378053,0,0,-0.058303781577964,0.311507585750597,0,-0.137124584673521,-0.19804891043336,-0.047619576124797,0.0031022748018448,0.0329657938672155,0,-0.645700337992725,0,0.190900731519684,-0.353410600340823,0,0.0529149250058734,-0.22036054761954,0.0164828969336078,-0.108622809454255,0,0,-0.0853037093066653,0.369336415860719,-0.353903524431274,0,0,-0.0801641524135359,-0.103710884116882,0,0,0.0329657938672155,0,0,0,0,0,0,0,0,0.0380631795471225,0.20176313485405,0,0,0,0,0,0,0,0,0,0.397657304760542,-0.90531713823476,0.0226245953043956,0.288136588103616,0.0318024225689008,0.077914450898156,0,0,0.123315645879389,0.103231932408637,0.0329657938672155,-0.0988969126304162,0,0,0,0,0.146793071746305,0,0,0,0.0461120283292552,-0.057730457053664,-0.31031287108688,0,0,0,-0.243988607734575,0,0,0,0,0.209681401389014,0,0,-0.63193017338638,0,-0.059298842429998,-0.0815818795468414,0,0.153229146181172,-1.0188474506818,-0.872669617335095,0,0,0.234095504425629,0,0,0.178317613119315,-0.0494044290984508,0.0329657938672155,0,0,0,0,0,0.4055220496289,0,-0.214314512399756,0,0,0.0294647796576763,0,0,0,0,0,0,0,0,-0.479929847862015,0,-0.0264957231146763,0,0,0,0,0,0,0.120252921932701,0.109304335937848,0.0318024225689008,0,0,0,0,0,0,0,0.29864719112572,0,0,0,0,0,-0.0333875161048034,0,0.0329657938672155,0,0,-0.564807121153884,0,0,-0.244396338326298,0,0.0329657938672155,0,0,0,0,0,0.02939632934717,0,0,0,0,0,0.0210398589761558,-0.726832643162301,0,0.212425724326828,0,0,0,0.0636048451378017,0,-0.211228453068289,0,0,0,0,0.00518897452780166,0,0,0,-0.0411915396513548,0,-0.160318030086386,0,0,0,0,0,0,0.191863837255831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.289169205658141,-0.0247755787802223,-0.28720751597291,-0.0467172912054725,0,0,-0.137177986873199,0,0,0,0,0,0,0.0281962500898623,0,0,0,0,0,0,0,0,0,0.0329657938672155,0,0,0,0,0,0,0,0,0.119073348236779,0,0,0,0,0,0,0.13485228055933,0.278298232535249,1.07779590341413,0,0,0,0,0,-0.0979578962680575,0,0,-0.00069371311323585,0,0.00699036476244527,0,0.0329657938672155,0,0,0.379870201561136,-0.26673750288954,-0.059955949519649,0,0,0,0.0297409298933566,0,0,-0.0449033483769968,0,-0.0667773874189013,0.0329657938672155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0.0329657938672155,0,0,0,0,0,0,0,0,0,0.0164828969336078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636048451378017,0.0164828969336078,0,0,0,0,0,0,0.0716373391722281,0.0636048451378017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105648702447645,0,0,0,0,0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| |||
|rna_box=106 | |rna_box=106 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 77: | ||
|rna_weight_ug=55.573 | |rna_weight_ug=55.573 | ||
|sample_age=11 | |sample_age=11 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB1938 | |sample_cell_catalog=RCB1938 | ||
|sample_cell_line=P30/OHK | |sample_cell_line=P30/OHK | ||
| Line 69: | Line 90: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.38417867006176e-285!GO:0043227;membrane-bound organelle;5.66251207104246e-258!GO:0043231;intracellular membrane-bound organelle;1.25801811365706e-257!GO:0043226;organelle;4.68284669125889e-249!GO:0043229;intracellular organelle;1.53237010862017e-248!GO:0005634;nucleus;5.07648927081635e-169!GO:0044422;organelle part;5.78625325837751e-162!GO:0044446;intracellular organelle part;3.9952424110039e-160!GO:0005737;cytoplasm;7.05683922268843e-134!GO:0043170;macromolecule metabolic process;5.57768819115796e-132!GO:0044238;primary metabolic process;8.30071340454168e-132!GO:0044237;cellular metabolic process;2.02449623800765e-131!GO:0044428;nuclear part;3.16211412218215e-113!GO:0032991;macromolecular complex;4.03752922027145e-110!GO:0043283;biopolymer metabolic process;2.10737046003935e-105!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.82396408222685e-98!GO:0043233;organelle lumen;4.1938389447553e-93!GO:0031974;membrane-enclosed lumen;4.1938389447553e-93!GO:0003723;RNA binding;1.77155046085668e-87!GO:0044444;cytoplasmic part;1.12580961175035e-86!GO:0010467;gene expression;4.73336217258919e-85!GO:0030529;ribonucleoprotein complex;3.27514723073192e-82!GO:0003676;nucleic acid binding;5.64029976545987e-73!GO:0006259;DNA metabolic process;1.45444406522939e-69!GO:0031981;nuclear lumen;1.63001147944457e-68!GO:0005515;protein binding;1.48312101798512e-64!GO:0006396;RNA processing;6.57838015243094e-63!GO:0005739;mitochondrion;3.67783153285829e-58!GO:0043234;protein complex;5.36090316803382e-58!GO:0016071;mRNA metabolic process;1.3694332144675e-57!GO:0016070;RNA metabolic process;2.34958400168331e-57!GO:0007049;cell cycle;7.34279145467185e-50!GO:0006397;mRNA processing;4.05222322998729e-48!GO:0008380;RNA splicing;1.12799796152778e-47!GO:0016043;cellular component organization and biogenesis;3.35843602049649e-47!GO:0019538;protein metabolic process;3.21839787775416e-46!GO:0006996;organelle organization and biogenesis;4.69564845239291e-46!GO:0005654;nucleoplasm;8.68715064134904e-46!GO:0006412;translation;2.27701488782358e-45!GO:0044267;cellular protein metabolic process;1.39080097296982e-42!GO:0044260;cellular macromolecule metabolic process;1.1720932035547e-41!GO:0031967;organelle envelope;1.72620955689072e-41!GO:0031975;envelope;2.56812086995562e-41!GO:0033036;macromolecule localization;5.77458551905555e-41!GO:0044429;mitochondrial part;1.96124263772929e-40!GO:0005694;chromosome;2.63180047239706e-40!GO:0006974;response to DNA damage stimulus;2.76976639998777e-40!GO:0015031;protein transport;6.57807605283821e-40!GO:0000166;nucleotide binding;1.05724991716076e-39!GO:0043228;non-membrane-bound organelle;3.63728626804132e-39!GO:0043232;intracellular non-membrane-bound organelle;3.63728626804132e-39!GO:0005840;ribosome;6.05051252182582e-39!GO:0022402;cell cycle process;1.59000834786974e-38!GO:0046907;intracellular transport;2.2031321734177e-38!GO:0045184;establishment of protein localization;5.01927961493762e-36!GO:0008104;protein localization;5.39849091024663e-36!GO:0006281;DNA repair;1.93454061620196e-35!GO:0031090;organelle membrane;2.3755682908028e-35!GO:0044451;nucleoplasm part;3.01133574287667e-35!GO:0044427;chromosomal part;6.16842656855771e-35!GO:0065003;macromolecular complex assembly;7.21082995918924e-35!GO:0000278;mitotic cell cycle;1.02583216212468e-34!GO:0051276;chromosome organization and biogenesis;2.9887417378952e-34!GO:0005681;spliceosome;3.44087557447472e-34!GO:0003735;structural constituent of ribosome;2.39285722686011e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.64722212542846e-32!GO:0009059;macromolecule biosynthetic process;9.2816723559942e-32!GO:0006886;intracellular protein transport;1.43448972521876e-31!GO:0022607;cellular component assembly;8.87209205556473e-31!GO:0033279;ribosomal subunit;1.1994210038949e-29!GO:0044249;cellular biosynthetic process;1.4088478950342e-29!GO:0032553;ribonucleotide binding;2.25990250047518e-29!GO:0032555;purine ribonucleotide binding;2.25990250047518e-29!GO:0005829;cytosol;2.54081964455479e-29!GO:0005524;ATP binding;3.40182210058546e-29!GO:0022403;cell cycle phase;1.24414244987151e-28!GO:0051301;cell division;1.33765455670272e-28!GO:0032559;adenyl ribonucleotide binding;2.90693757996e-28!GO:0000087;M phase of mitotic cell cycle;2.9342247132593e-28!GO:0017076;purine nucleotide binding;1.05468677718975e-27!GO:0007067;mitosis;1.11603354469335e-27!GO:0009058;biosynthetic process;1.2640794463807e-27!GO:0051649;establishment of cellular localization;3.75697610645006e-27!GO:0009719;response to endogenous stimulus;5.01898860129404e-27!GO:0051641;cellular localization;6.56063211774261e-27!GO:0006512;ubiquitin cycle;7.2927953679278e-27!GO:0016874;ligase activity;1.49567341996823e-26!GO:0006260;DNA replication;2.9087225556102e-26!GO:0030554;adenyl nucleotide binding;3.34209661126594e-26!GO:0000279;M phase;1.91754018315018e-25!GO:0006325;establishment and/or maintenance of chromatin architecture;3.80462410451486e-25!GO:0005740;mitochondrial envelope;9.21075645752178e-25!GO:0019866;organelle inner membrane;1.03367231112958e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.50438932357597e-24!GO:0006323;DNA packaging;2.77347026499805e-24!GO:0050794;regulation of cellular process;3.42677719315784e-24!GO:0019222;regulation of metabolic process;4.12169931781214e-24!GO:0031966;mitochondrial membrane;2.01039760936918e-23!GO:0017111;nucleoside-triphosphatase activity;5.53547238112581e-23!GO:0044445;cytosolic part;7.56729416660711e-23!GO:0016462;pyrophosphatase activity;7.96720229359888e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;1.24492554863291e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.25209180351994e-22!GO:0005743;mitochondrial inner membrane;5.37193416384499e-22!GO:0043412;biopolymer modification;1.99756814330248e-21!GO:0005730;nucleolus;2.44494878770902e-21!GO:0031323;regulation of cellular metabolic process;4.82022234749801e-21!GO:0008134;transcription factor binding;1.7699067439398e-20!GO:0006350;transcription;4.01250532451318e-20!GO:0051726;regulation of cell cycle;4.24156120041915e-20!GO:0044265;cellular macromolecule catabolic process;6.4232896166764e-20!GO:0022618;protein-RNA complex assembly;7.43980434748635e-20!GO:0016568;chromatin modification;7.57503842618785e-20!GO:0000074;regulation of progression through cell cycle;7.57503842618785e-20!GO:0031980;mitochondrial lumen;1.23505676063235e-19!GO:0005759;mitochondrial matrix;1.23505676063235e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;3.1242896828704e-19!GO:0006511;ubiquitin-dependent protein catabolic process;3.2874248604366e-19!GO:0019941;modification-dependent protein catabolic process;4.8862838813471e-19!GO:0043632;modification-dependent macromolecule catabolic process;4.8862838813471e-19!GO:0044257;cellular protein catabolic process;1.09905547014355e-18!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.29558721559536e-18!GO:0043687;post-translational protein modification;1.37666723539723e-18!GO:0005635;nuclear envelope;2.00115728639209e-18!GO:0006464;protein modification process;2.21134036448087e-18!GO:0016604;nuclear body;3.79981897824438e-18!GO:0010468;regulation of gene expression;4.44919520600758e-18!GO:0004386;helicase activity;4.70597522938277e-18!GO:0031965;nuclear membrane;5.4396971058095e-18!GO:0016887;ATPase activity;6.80249142827204e-18!GO:0042623;ATPase activity, coupled;1.02372520824757e-17!GO:0003677;DNA binding;2.09875525495365e-17!GO:0032774;RNA biosynthetic process;2.20992716404428e-17!GO:0050789;regulation of biological process;2.95518061962121e-17!GO:0006457;protein folding;3.0213075934853e-17!GO:0006605;protein targeting;3.0503485898239e-17!GO:0006351;transcription, DNA-dependent;3.96552434430495e-17!GO:0008135;translation factor activity, nucleic acid binding;4.45955278182685e-17!GO:0044453;nuclear membrane part;1.17125572673971e-16!GO:0043285;biopolymer catabolic process;2.31259733080473e-16!GO:0006119;oxidative phosphorylation;2.79042519724319e-16!GO:0044455;mitochondrial membrane part;3.45454330762624e-16!GO:0000775;chromosome, pericentric region;3.94195183082823e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;6.11137415268504e-16!GO:0000375;RNA splicing, via transesterification reactions;6.11137415268504e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.11137415268504e-16!GO:0050657;nucleic acid transport;8.65562415219489e-16!GO:0051236;establishment of RNA localization;8.65562415219489e-16!GO:0050658;RNA transport;8.65562415219489e-16!GO:0006403;RNA localization;9.79610894034197e-16!GO:0000785;chromatin;1.10075708566257e-15!GO:0015934;large ribosomal subunit;1.55167922480959e-15!GO:0045449;regulation of transcription;1.81846238493481e-15!GO:0009057;macromolecule catabolic process;5.05552867121431e-15!GO:0006913;nucleocytoplasmic transport;6.04695863909148e-15!GO:0044248;cellular catabolic process;6.72010059054102e-15!GO:0015935;small ribosomal subunit;6.82287619475215e-15!GO:0016607;nuclear speck;1.47612129163276e-14!GO:0051169;nuclear transport;1.5299286557163e-14!GO:0005643;nuclear pore;1.76617431276664e-14!GO:0012505;endomembrane system;1.99561104621797e-14!GO:0006355;regulation of transcription, DNA-dependent;3.01172193192675e-14!GO:0006261;DNA-dependent DNA replication;6.41940111432892e-14!GO:0008026;ATP-dependent helicase activity;1.1155152365459e-13!GO:0048770;pigment granule;1.31564921189963e-13!GO:0042470;melanosome;1.31564921189963e-13!GO:0051028;mRNA transport;1.75927547965415e-13!GO:0042254;ribosome biogenesis and assembly;4.3935062588976e-13!GO:0015630;microtubule cytoskeleton;4.40606906470957e-13!GO:0006366;transcription from RNA polymerase II promoter;4.84680778428423e-13!GO:0030163;protein catabolic process;5.31160531751261e-13!GO:0006333;chromatin assembly or disassembly;6.66231767998418e-13!GO:0051082;unfolded protein binding;8.12435167262673e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.4708281601658e-13!GO:0003712;transcription cofactor activity;1.77066454790997e-12!GO:0006446;regulation of translational initiation;2.01921456849758e-12!GO:0008639;small protein conjugating enzyme activity;2.38885901728627e-12!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.3960190636599e-12!GO:0000502;proteasome complex (sensu Eukaryota);2.3960190636599e-12!GO:0006413;translational initiation;3.20007104829208e-12!GO:0005819;spindle;3.44212482221211e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.89973742933512e-12!GO:0004842;ubiquitin-protein ligase activity;4.89895627940218e-12!GO:0005746;mitochondrial respiratory chain;5.21673614364949e-12!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.76639812907926e-12!GO:0043566;structure-specific DNA binding;6.4754189987859e-12!GO:0046930;pore complex;1.25661427522575e-11!GO:0003743;translation initiation factor activity;1.32591836469421e-11!GO:0065002;intracellular protein transport across a membrane;1.39769790249545e-11!GO:0016740;transferase activity;1.42017060872516e-11!GO:0003697;single-stranded DNA binding;1.44310835285757e-11!GO:0065004;protein-DNA complex assembly;1.50878017170135e-11!GO:0019787;small conjugating protein ligase activity;2.46292239494764e-11!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.95519699004901e-11!GO:0048193;Golgi vesicle transport;1.082113370291e-10!GO:0000075;cell cycle checkpoint;1.34391245129831e-10!GO:0006399;tRNA metabolic process;1.39907966548713e-10!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.41494990822896e-10!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.64017077242154e-10!GO:0050136;NADH dehydrogenase (quinone) activity;2.0236791478007e-10!GO:0003954;NADH dehydrogenase activity;2.0236791478007e-10!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.0236791478007e-10!GO:0065007;biological regulation;2.51342186898179e-10!GO:0005813;centrosome;4.42447927846064e-10!GO:0016779;nucleotidyltransferase activity;6.43881805190664e-10!GO:0005815;microtubule organizing center;6.970912688093e-10!GO:0006310;DNA recombination;7.46502127441915e-10!GO:0017038;protein import;7.48783312677874e-10!GO:0006793;phosphorus metabolic process;8.33685126667767e-10!GO:0006796;phosphate metabolic process;8.33685126667767e-10!GO:0005657;replication fork;8.48799399368235e-10!GO:0008270;zinc ion binding;1.06777739657353e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.33794749803009e-09!GO:0004812;aminoacyl-tRNA ligase activity;1.33794749803009e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.33794749803009e-09!GO:0016881;acid-amino acid ligase activity;1.45374239333212e-09!GO:0043038;amino acid activation;1.52487138321018e-09!GO:0006418;tRNA aminoacylation for protein translation;1.52487138321018e-09!GO:0043039;tRNA aminoacylation;1.52487138321018e-09!GO:0051329;interphase of mitotic cell cycle;1.66160398149605e-09!GO:0006461;protein complex assembly;1.89371563832021e-09!GO:0005761;mitochondrial ribosome;2.03783706267694e-09!GO:0000313;organellar ribosome;2.03783706267694e-09!GO:0007059;chromosome segregation;2.07557728249795e-09!GO:0042775;organelle ATP synthesis coupled electron transport;2.49254521388339e-09!GO:0042773;ATP synthesis coupled electron transport;2.49254521388339e-09!GO:0012501;programmed cell death;2.69889066039644e-09!GO:0008094;DNA-dependent ATPase activity;2.75597874260486e-09!GO:0007051;spindle organization and biogenesis;3.0561191463996e-09!GO:0032446;protein modification by small protein conjugation;3.26472259792213e-09!GO:0006915;apoptosis;3.32941799892916e-09!GO:0016310;phosphorylation;3.39794273987987e-09!GO:0016363;nuclear matrix;3.56341605417628e-09!GO:0008565;protein transporter activity;3.68399297978951e-09!GO:0006364;rRNA processing;4.47313157457959e-09!GO:0016072;rRNA metabolic process;5.94126877930613e-09!GO:0016563;transcription activator activity;6.11131910362008e-09!GO:0051325;interphase;6.12190143819064e-09!GO:0005667;transcription factor complex;6.16758201459134e-09!GO:0003682;chromatin binding;6.33782136429307e-09!GO:0030964;NADH dehydrogenase complex (quinone);8.25044341051244e-09!GO:0045271;respiratory chain complex I;8.25044341051244e-09!GO:0005747;mitochondrial respiratory chain complex I;8.25044341051244e-09!GO:0044432;endoplasmic reticulum part;1.09991719654798e-08!GO:0045333;cellular respiration;1.39715449865588e-08!GO:0016567;protein ubiquitination;1.52035688497439e-08!GO:0003713;transcription coactivator activity;1.78026521610489e-08!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.78515520850546e-08!GO:0045786;negative regulation of progression through cell cycle;1.99353649552942e-08!GO:0006163;purine nucleotide metabolic process;2.06378272754006e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.429724314972e-08!GO:0009259;ribonucleotide metabolic process;2.44598896042983e-08!GO:0051246;regulation of protein metabolic process;3.41467194296721e-08!GO:0006164;purine nucleotide biosynthetic process;3.41467194296721e-08!GO:0009060;aerobic respiration;4.35075976518512e-08!GO:0006302;double-strand break repair;4.59858654735163e-08!GO:0051186;cofactor metabolic process;5.23948386390354e-08!GO:0005783;endoplasmic reticulum;7.36979642533107e-08!GO:0000776;kinetochore;8.1167533275844e-08!GO:0009260;ribonucleotide biosynthetic process;8.87192455978076e-08!GO:0008219;cell death;9.37125365346023e-08!GO:0016265;death;9.37125365346023e-08!GO:0000151;ubiquitin ligase complex;9.96650723981393e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.25631754200759e-07!GO:0003690;double-stranded DNA binding;1.50273317104096e-07!GO:0051170;nuclear import;1.6472712448234e-07!GO:0016192;vesicle-mediated transport;1.73914841201717e-07!GO:0051052;regulation of DNA metabolic process;1.77524823151545e-07!GO:0000245;spliceosome assembly;1.96305212119127e-07!GO:0009056;catabolic process;3.24206995530893e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.31801720021299e-07!GO:0006606;protein import into nucleus;3.43649242661131e-07!GO:0031324;negative regulation of cellular metabolic process;3.57219575183334e-07!GO:0009150;purine ribonucleotide metabolic process;3.67310757275012e-07!GO:0006732;coenzyme metabolic process;4.63613504395631e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.70985548944299e-07!GO:0051168;nuclear export;5.49870141649822e-07!GO:0019899;enzyme binding;5.71174958693749e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.17467426901444e-07!GO:0009152;purine ribonucleotide biosynthetic process;6.37108897204262e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.44290720430646e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.45809746382975e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.07598754267035e-07!GO:0008168;methyltransferase activity;9.37815270710437e-07!GO:0016741;transferase activity, transferring one-carbon groups;9.89934416708514e-07!GO:0046914;transition metal ion binding;1.01764793096722e-06!GO:0007088;regulation of mitosis;1.10881486720827e-06!GO:0031497;chromatin assembly;1.14848982078343e-06!GO:0003678;DNA helicase activity;1.37061694613181e-06!GO:0007005;mitochondrion organization and biogenesis;1.41429245887625e-06!GO:0004674;protein serine/threonine kinase activity;1.42558658127946e-06!GO:0006402;mRNA catabolic process;1.50381059217864e-06!GO:0005794;Golgi apparatus;1.57478380358867e-06!GO:0048523;negative regulation of cellular process;1.61426643366034e-06!GO:0005789;endoplasmic reticulum membrane;1.68819746746978e-06!GO:0006334;nucleosome assembly;1.77841150026614e-06!GO:0006099;tricarboxylic acid cycle;1.88145315011287e-06!GO:0046356;acetyl-CoA catabolic process;1.88145315011287e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.89005236617967e-06!GO:0006084;acetyl-CoA metabolic process;1.89171464981415e-06!GO:0003724;RNA helicase activity;2.0557724735491e-06!GO:0016564;transcription repressor activity;2.08112731685415e-06!GO:0015986;ATP synthesis coupled proton transport;2.43634438185631e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.43634438185631e-06!GO:0019829;cation-transporting ATPase activity;2.76955634399783e-06!GO:0000226;microtubule cytoskeleton organization and biogenesis;3.5022637597728e-06!GO:0006613;cotranslational protein targeting to membrane;3.73199753467318e-06!GO:0003899;DNA-directed RNA polymerase activity;3.86336278704642e-06!GO:0009892;negative regulation of metabolic process;3.95435654501545e-06!GO:0005793;ER-Golgi intermediate compartment;4.45745815509072e-06!GO:0005839;proteasome core complex (sensu Eukaryota);4.53225193481264e-06!GO:0007093;mitotic cell cycle checkpoint;4.92905559725054e-06!GO:0006352;transcription initiation;5.47014572014491e-06!GO:0006612;protein targeting to membrane;6.42904705775666e-06!GO:0030120;vesicle coat;7.7507481262378e-06!GO:0030662;coated vesicle membrane;7.7507481262378e-06!GO:0048475;coated membrane;7.99365324873742e-06!GO:0030117;membrane coat;7.99365324873742e-06!GO:0043623;cellular protein complex assembly;8.61948662958491e-06!GO:0008276;protein methyltransferase activity;8.63790026252147e-06!GO:0009141;nucleoside triphosphate metabolic process;9.81442385128502e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.02009834730033e-05!GO:0004298;threonine endopeptidase activity;1.10053642651184e-05!GO:0009142;nucleoside triphosphate biosynthetic process;1.11036067428433e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.11036067428433e-05!GO:0000228;nuclear chromosome;1.11679095324046e-05!GO:0016787;hydrolase activity;1.16754266767631e-05!GO:0007017;microtubule-based process;1.26262669581257e-05!GO:0045259;proton-transporting ATP synthase complex;1.26311810044414e-05!GO:0003684;damaged DNA binding;1.31011361238019e-05!GO:0065009;regulation of a molecular function;1.50300138049254e-05!GO:0006401;RNA catabolic process;1.50564258074125e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.52710926004684e-05!GO:0016251;general RNA polymerase II transcription factor activity;1.6111173436129e-05!GO:0006754;ATP biosynthetic process;1.66858749003685e-05!GO:0006753;nucleoside phosphate metabolic process;1.66858749003685e-05!GO:0016481;negative regulation of transcription;1.71801019657093e-05!GO:0051427;hormone receptor binding;1.76425564316995e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.86750232659206e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.86750232659206e-05!GO:0007052;mitotic spindle organization and biogenesis;1.931029741528e-05!GO:0009109;coenzyme catabolic process;1.960525355093e-05!GO:0046034;ATP metabolic process;2.01006218737027e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.1046697788865e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.1046697788865e-05!GO:0003729;mRNA binding;2.23816453650888e-05!GO:0000819;sister chromatid segregation;2.30184925839499e-05!GO:0015631;tubulin binding;2.531020043569e-05!GO:0006752;group transfer coenzyme metabolic process;2.86080871579206e-05!GO:0042981;regulation of apoptosis;3.09410580831809e-05!GO:0035257;nuclear hormone receptor binding;3.20659847840913e-05!GO:0000070;mitotic sister chromatid segregation;3.24971266207896e-05!GO:0006270;DNA replication initiation;3.33695711995452e-05!GO:0006414;translational elongation;3.44094804128294e-05!GO:0005768;endosome;3.5101470531196e-05!GO:0032508;DNA duplex unwinding;3.60368894782828e-05!GO:0032392;DNA geometric change;3.60368894782828e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;3.62117543460798e-05!GO:0016469;proton-transporting two-sector ATPase complex;3.64671759810558e-05!GO:0043067;regulation of programmed cell death;4.04508058168518e-05!GO:0004527;exonuclease activity;4.1123684309119e-05!GO:0005874;microtubule;4.42448432653568e-05!GO:0015078;hydrogen ion transmembrane transporter activity;4.45765908598585e-05!GO:0000922;spindle pole;4.98644928460265e-05!GO:0005798;Golgi-associated vesicle;5.53733189449797e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;5.55446521919741e-05!GO:0048519;negative regulation of biological process;5.60481310123232e-05!GO:0009055;electron carrier activity;6.51018844044401e-05!GO:0000910;cytokinesis;6.79766804395259e-05!GO:0006405;RNA export from nucleus;7.20434151994652e-05!GO:0008186;RNA-dependent ATPase activity;8.78023005434367e-05!GO:0009117;nucleotide metabolic process;9.68409376660111e-05!GO:0000049;tRNA binding;9.80085978057799e-05!GO:0006338;chromatin remodeling;0.000110988134089089!GO:0006268;DNA unwinding during replication;0.000113937562560977!GO:0032200;telomere organization and biogenesis;0.000116098563448073!GO:0000723;telomere maintenance;0.000116098563448073!GO:0051252;regulation of RNA metabolic process;0.000116149520373873!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.000118594706234745!GO:0051188;cofactor biosynthetic process;0.000118906983931176!GO:0003702;RNA polymerase II transcription factor activity;0.00012095225001916!GO:0031570;DNA integrity checkpoint;0.000145757712172447!GO:0004518;nuclease activity;0.000154763458298722!GO:0051187;cofactor catabolic process;0.000190619242717691!GO:0016301;kinase activity;0.000195836275950308!GO:0006383;transcription from RNA polymerase III promoter;0.000207540320758445!GO:0042054;histone methyltransferase activity;0.000233856047241829!GO:0004004;ATP-dependent RNA helicase activity;0.000286111827168304!GO:0006839;mitochondrial transport;0.00029549403417716!GO:0043021;ribonucleoprotein binding;0.000302898976815583!GO:0009108;coenzyme biosynthetic process;0.00032409297636061!GO:0003714;transcription corepressor activity;0.000330796214849048!GO:0000287;magnesium ion binding;0.000337117871095782!GO:0005876;spindle microtubule;0.000337659654127639!GO:0000082;G1/S transition of mitotic cell cycle;0.000365037609731799!GO:0030521;androgen receptor signaling pathway;0.000400597690736374!GO:0019783;small conjugating protein-specific protease activity;0.00043265937037263!GO:0000725;recombinational repair;0.000438317249858412!GO:0000724;double-strand break repair via homologous recombination;0.000438317249858412!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000484089179240771!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000486555294524965!GO:0003711;transcription elongation regulator activity;0.000489726827485616!GO:0008654;phospholipid biosynthetic process;0.000499784194033264!GO:0051789;response to protein stimulus;0.0005083955078523!GO:0006986;response to unfolded protein;0.0005083955078523!GO:0048471;perinuclear region of cytoplasm;0.000513787620601052!GO:0005637;nuclear inner membrane;0.000514301432528241!GO:0007050;cell cycle arrest;0.000518181710434072!GO:0030880;RNA polymerase complex;0.000528197978857193!GO:0006367;transcription initiation from RNA polymerase II promoter;0.000537472192270811!GO:0016279;protein-lysine N-methyltransferase activity;0.000540665252931827!GO:0018024;histone-lysine N-methyltransferase activity;0.000540665252931827!GO:0016278;lysine N-methyltransferase activity;0.000540665252931827!GO:0004843;ubiquitin-specific protease activity;0.000559452766834149!GO:0007010;cytoskeleton organization and biogenesis;0.000627941256084804!GO:0031072;heat shock protein binding;0.00063792266118291!GO:0006275;regulation of DNA replication;0.000652144381902346!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00068299551783936!GO:0015399;primary active transmembrane transporter activity;0.00068299551783936!GO:0003924;GTPase activity;0.000702111067050265!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000714629742338312!GO:0032259;methylation;0.000720564808709186!GO:0000118;histone deacetylase complex;0.000722296831048855!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000759092839957104!GO:0004003;ATP-dependent DNA helicase activity;0.000764524825381441!GO:0008017;microtubule binding;0.000765732998572138!GO:0000781;chromosome, telomeric region;0.000776738430286235!GO:0043596;nuclear replication fork;0.000821626952900121!GO:0030384;phosphoinositide metabolic process;0.000827360444285438!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000839809295359163!GO:0000428;DNA-directed RNA polymerase complex;0.000839809295359163!GO:0003746;translation elongation factor activity;0.00086029988028911!GO:0042770;DNA damage response, signal transduction;0.000864389353678617!GO:0000077;DNA damage checkpoint;0.000867333025431976!GO:0000792;heterochromatin;0.00086955067401122!GO:0005770;late endosome;0.000876585360958976!GO:0004221;ubiquitin thiolesterase activity;0.000894722839063146!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.000916654109258156!GO:0044452;nucleolar part;0.000920395115403626!GO:0043414;biopolymer methylation;0.000972228350441479!GO:0031124;mRNA 3'-end processing;0.000973259562741399!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00100010254977743!GO:0016569;covalent chromatin modification;0.00106506181997395!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00113495151463358!GO:0030518;steroid hormone receptor signaling pathway;0.00115160268443944!GO:0042393;histone binding;0.00117236200064321!GO:0050790;regulation of catalytic activity;0.0012270226177454!GO:0048500;signal recognition particle;0.00129839311040361!GO:0008022;protein C-terminus binding;0.00129855656441525!GO:0005048;signal sequence binding;0.00129855656441525!GO:0031577;spindle checkpoint;0.00132142519423269!GO:0005769;early endosome;0.0013275090315844!GO:0016859;cis-trans isomerase activity;0.00133926097472458!GO:0016853;isomerase activity;0.00134993924003237!GO:0006650;glycerophospholipid metabolic process;0.00136822331370304!GO:0000059;protein import into nucleus, docking;0.00141158452080901!GO:0015980;energy derivation by oxidation of organic compounds;0.00142834415594064!GO:0006284;base-excision repair;0.00145094340057378!GO:0006891;intra-Golgi vesicle-mediated transport;0.00145734596186398!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00155222363462531!GO:0005525;GTP binding;0.00156812532882412!GO:0031647;regulation of protein stability;0.00157220359658555!GO:0005684;U2-dependent spliceosome;0.00169528124878714!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00172415357631058!GO:0031123;RNA 3'-end processing;0.00176118285056707!GO:0044454;nuclear chromosome part;0.00182051572160163!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00190128352946288!GO:0006417;regulation of translation;0.00191561053174042!GO:0003887;DNA-directed DNA polymerase activity;0.00201565086388585!GO:0007006;mitochondrial membrane organization and biogenesis;0.00206404698139745!GO:0000793;condensed chromosome;0.00210589754411236!GO:0044431;Golgi apparatus part;0.00210748855973357!GO:0005885;Arp2/3 protein complex;0.00223560832710217!GO:0043601;nuclear replisome;0.00223560832710217!GO:0030894;replisome;0.00223560832710217!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0022641066609306!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0022641066609306!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0022641066609306!GO:0030663;COPI coated vesicle membrane;0.00233903655363945!GO:0030126;COPI vesicle coat;0.00233903655363945!GO:0007346;regulation of progression through mitotic cell cycle;0.00241127788313809!GO:0043069;negative regulation of programmed cell death;0.00241127788313809!GO:0008312;7S RNA binding;0.00241130243405635!GO:0006611;protein export from nucleus;0.00242872104531762!GO:0043488;regulation of mRNA stability;0.00242872104531762!GO:0043487;regulation of RNA stability;0.00242872104531762!GO:0016584;nucleosome positioning;0.0025351431813262!GO:0051920;peroxiredoxin activity;0.00255756501369336!GO:0006289;nucleotide-excision repair;0.00260649720811996!GO:0043066;negative regulation of apoptosis;0.00263086778774982!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00263285115145939!GO:0045047;protein targeting to ER;0.00263285115145939!GO:0000152;nuclear ubiquitin ligase complex;0.00264453868773728!GO:0051053;negative regulation of DNA metabolic process;0.00267308481337862!GO:0006950;response to stress;0.00269011680523647!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00272512785780264!GO:0044440;endosomal part;0.00272512785780264!GO:0010008;endosome membrane;0.00272512785780264!GO:0045947;negative regulation of translational initiation;0.00272512785780264!GO:0008234;cysteine-type peptidase activity;0.00272512785780264!GO:0003725;double-stranded RNA binding;0.00282045178810568!GO:0008139;nuclear localization sequence binding;0.00285937047392013!GO:0008033;tRNA processing;0.00289035439634947!GO:0043681;protein import into mitochondrion;0.00292658193944908!GO:0006520;amino acid metabolic process;0.00292658193944908!GO:0035258;steroid hormone receptor binding;0.00296617924029928!GO:0051087;chaperone binding;0.00299661249572852!GO:0031326;regulation of cellular biosynthetic process;0.00300491229261095!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00318510768453003!GO:0009112;nucleobase metabolic process;0.00318510768453003!GO:0009165;nucleotide biosynthetic process;0.00322903098433144!GO:0030134;ER to Golgi transport vesicle;0.00326595948829823!GO:0005669;transcription factor TFIID complex;0.00350632150750555!GO:0051287;NAD binding;0.00356589240065275!GO:0047485;protein N-terminus binding;0.00358743666096334!GO:0030127;COPII vesicle coat;0.00364694553071497!GO:0012507;ER to Golgi transport vesicle membrane;0.00364694553071497!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.00371961905883867!GO:0000786;nucleosome;0.00387358107962464!GO:0016197;endosome transport;0.00408316940435002!GO:0005762;mitochondrial large ribosomal subunit;0.00422993403906957!GO:0000315;organellar large ribosomal subunit;0.00422993403906957!GO:0030137;COPI-coated vesicle;0.00443621236327939!GO:0016570;histone modification;0.00451641534862112!GO:0019752;carboxylic acid metabolic process;0.00453305442499074!GO:0009081;branched chain family amino acid metabolic process;0.0045555736228154!GO:0042802;identical protein binding;0.0045555736228154!GO:0045454;cell redox homeostasis;0.00468179375166866!GO:0043492;ATPase activity, coupled to movement of substances;0.00473469585039923!GO:0046966;thyroid hormone receptor binding;0.00474944097789706!GO:0007004;telomere maintenance via telomerase;0.00482045762669205!GO:0005663;DNA replication factor C complex;0.0048905959141357!GO:0006082;organic acid metabolic process;0.0049301733902156!GO:0030522;intracellular receptor-mediated signaling pathway;0.0049740922783225!GO:0007243;protein kinase cascade;0.00512229284235689!GO:0008632;apoptotic program;0.00518998064748265!GO:0030496;midbody;0.00525457449755205!GO:0030658;transport vesicle membrane;0.00535574733484331!GO:0005788;endoplasmic reticulum lumen;0.00537370914440918!GO:0006916;anti-apoptosis;0.00550211116823869!GO:0006626;protein targeting to mitochondrion;0.00558653998012466!GO:0051338;regulation of transferase activity;0.00570703153107065!GO:0006406;mRNA export from nucleus;0.00578994784815905!GO:0006376;mRNA splice site selection;0.00580933429991546!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00580933429991546!GO:0006730;one-carbon compound metabolic process;0.00587163258861323!GO:0043284;biopolymer biosynthetic process;0.00589592528909497!GO:0051656;establishment of organelle localization;0.00594859468927002!GO:0045892;negative regulation of transcription, DNA-dependent;0.00605227989294489!GO:0019867;outer membrane;0.0060572515983258!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0066136769851759!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00687742133146369!GO:0000314;organellar small ribosomal subunit;0.00687742133146369!GO:0005763;mitochondrial small ribosomal subunit;0.00687742133146369!GO:0031968;organelle outer membrane;0.00694283833491383!GO:0007264;small GTPase mediated signal transduction;0.00726534154897086!GO:0044450;microtubule organizing center part;0.00761448594577076!GO:0006144;purine base metabolic process;0.0081503132572258!GO:0000726;non-recombinational repair;0.0081503132572258!GO:0016790;thiolester hydrolase activity;0.0081503132572258!GO:0051640;organelle localization;0.00825607666363487!GO:0051297;centrosome organization and biogenesis;0.00829762755238174!GO:0031023;microtubule organizing center organization and biogenesis;0.00829762755238174!GO:0016272;prefoldin complex;0.00829762755238174!GO:0016407;acetyltransferase activity;0.00833423129865321!GO:0008287;protein serine/threonine phosphatase complex;0.00845713297432749!GO:0006278;RNA-dependent DNA replication;0.00863205715142454!GO:0007265;Ras protein signal transduction;0.00864268284157183!GO:0032561;guanyl ribonucleotide binding;0.00900288876888474!GO:0019001;guanyl nucleotide binding;0.00900288876888474!GO:0008170;N-methyltransferase activity;0.00902508983026322!GO:0045120;pronucleus;0.00904750890471034!GO:0048487;beta-tubulin binding;0.00912501734029223!GO:0005832;chaperonin-containing T-complex;0.00917336187024386!GO:0043549;regulation of kinase activity;0.00917387130894607!GO:0033116;ER-Golgi intermediate compartment membrane;0.00931763619609844!GO:0008408;3'-5' exonuclease activity;0.0094937952819118!GO:0050681;androgen receptor binding;0.00952197765584887!GO:0031988;membrane-bound vesicle;0.00973569398764589!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.00994349340018813!GO:0006266;DNA ligation;0.0101057559493332!GO:0030660;Golgi-associated vesicle membrane;0.0102336410713903!GO:0000209;protein polyubiquitination;0.0104063850615416!GO:0007098;centrosome cycle;0.0104063850615416!GO:0005083;small GTPase regulator activity;0.0104978018996634!GO:0009124;nucleoside monophosphate biosynthetic process;0.0107393802926654!GO:0009123;nucleoside monophosphate metabolic process;0.0107393802926654!GO:0005741;mitochondrial outer membrane;0.0109276386799297!GO:0051098;regulation of binding;0.0110402428557486!GO:0008652;amino acid biosynthetic process;0.0110665120307859!GO:0046112;nucleobase biosynthetic process;0.0110960072935481!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0113133664452238!GO:0006595;polyamine metabolic process;0.0119990649220309!GO:0000018;regulation of DNA recombination;0.0122365299214804!GO:0008213;protein amino acid alkylation;0.0122586260818441!GO:0006479;protein amino acid methylation;0.0122586260818441!GO:0046489;phosphoinositide biosynthetic process;0.0124317906425307!GO:0043087;regulation of GTPase activity;0.0126746619279305!GO:0004722;protein serine/threonine phosphatase activity;0.0126972529842975!GO:0051539;4 iron, 4 sulfur cluster binding;0.0127951747354828!GO:0007242;intracellular signaling cascade;0.0128980902980116!GO:0006301;postreplication repair;0.0129474380257924!GO:0006378;mRNA polyadenylation;0.0132085816056916!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0132187439318424!GO:0006468;protein amino acid phosphorylation;0.0135181569927778!GO:0051320;S phase;0.0135860281349129!GO:0022411;cellular component disassembly;0.0136766227192006!GO:0000339;RNA cap binding;0.0136766227192006!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0139625316845997!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0139625316845997!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0139784565069667!GO:0046467;membrane lipid biosynthetic process;0.0139784565069667!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0139808739600766!GO:0032984;macromolecular complex disassembly;0.0140673499682808!GO:0046474;glycerophospholipid biosynthetic process;0.0145887771849506!GO:0006818;hydrogen transport;0.0149736281779467!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0149966648519329!GO:0006007;glucose catabolic process;0.0150676026243946!GO:0004576;oligosaccharyl transferase activity;0.0153780938227744!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0159472623553095!GO:0031982;vesicle;0.0160437902852079!GO:0008156;negative regulation of DNA replication;0.0162142594514695!GO:0008097;5S rRNA binding;0.0162568772802545!GO:0051540;metal cluster binding;0.0162568772802545!GO:0051536;iron-sulfur cluster binding;0.0162568772802545!GO:0005652;nuclear lamina;0.0167664347088778!GO:0005680;anaphase-promoting complex;0.0168317142067983!GO:0015992;proton transport;0.0168317142067983!GO:0004402;histone acetyltransferase activity;0.0174206501890087!GO:0004468;lysine N-acetyltransferase activity;0.0174206501890087!GO:0031625;ubiquitin protein ligase binding;0.0178848538577022!GO:0033170;DNA-protein loading ATPase activity;0.017962704128216!GO:0003689;DNA clamp loader activity;0.017962704128216!GO:0007021;tubulin folding;0.0181654461972233!GO:0050000;chromosome localization;0.0184085599121881!GO:0051303;establishment of chromosome localization;0.0184085599121881!GO:0000096;sulfur amino acid metabolic process;0.0186164204251913!GO:0006354;RNA elongation;0.0187739741029645!GO:0008286;insulin receptor signaling pathway;0.018915740570444!GO:0045941;positive regulation of transcription;0.018915740570444!GO:0040029;regulation of gene expression, epigenetic;0.0190250478437126!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0190616602447732!GO:0000178;exosome (RNase complex);0.0192057934130789!GO:0016023;cytoplasmic membrane-bound vesicle;0.0192409133110605!GO:0030867;rough endoplasmic reticulum membrane;0.0200832937541597!GO:0045815;positive regulation of gene expression, epigenetic;0.0202097876349297!GO:0009451;RNA modification;0.0204163664773053!GO:0030433;ER-associated protein catabolic process;0.020520681135978!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.020520681135978!GO:0000119;mediator complex;0.0206626074751699!GO:0043022;ribosome binding;0.0209042327119174!GO:0005096;GTPase activator activity;0.0211599426600561!GO:0045859;regulation of protein kinase activity;0.0212221482400329!GO:0007034;vacuolar transport;0.0218690851475575!GO:0033673;negative regulation of kinase activity;0.0220937893502257!GO:0006469;negative regulation of protein kinase activity;0.0220937893502257!GO:0005658;alpha DNA polymerase:primase complex;0.0224526521570877!GO:0009066;aspartate family amino acid metabolic process;0.0227108028061574!GO:0009889;regulation of biosynthetic process;0.0228746323193265!GO:0048522;positive regulation of cellular process;0.0230501975756062!GO:0043241;protein complex disassembly;0.0232483202247556!GO:0043550;regulation of lipid kinase activity;0.0232483202247556!GO:0000123;histone acetyltransferase complex;0.0236304419260708!GO:0000790;nuclear chromatin;0.0236789326631757!GO:0008159;positive transcription elongation factor activity;0.0236789326631757!GO:0009161;ribonucleoside monophosphate metabolic process;0.0237684303587593!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0237684303587593!GO:0019900;kinase binding;0.0240420691315583!GO:0009303;rRNA transcription;0.0243145654287817!GO:0043065;positive regulation of apoptosis;0.0247802975135039!GO:0046483;heterocycle metabolic process;0.024813849754116!GO:0051348;negative regulation of transferase activity;0.0250152007726632!GO:0045893;positive regulation of transcription, DNA-dependent;0.0250152007726632!GO:0008536;Ran GTPase binding;0.0254545300554839!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0258715148002377!GO:0030176;integral to endoplasmic reticulum membrane;0.0261304373659783!GO:0051318;G1 phase;0.0263610647353574!GO:0000139;Golgi membrane;0.0264172924660797!GO:0008180;signalosome;0.0274191026431071!GO:0043068;positive regulation of programmed cell death;0.0276879556550571!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0281094577357425!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.0283954693918335!GO:0032039;integrator complex;0.0290481451900974!GO:0042026;protein refolding;0.0291505862269435!GO:0043624;cellular protein complex disassembly;0.0293287334132389!GO:0030133;transport vesicle;0.0295839648000221!GO:0031410;cytoplasmic vesicle;0.0298177572898011!GO:0018193;peptidyl-amino acid modification;0.0298177572898011!GO:0004532;exoribonuclease activity;0.0299262638146701!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0299262638146701!GO:0009083;branched chain family amino acid catabolic process;0.0299262638146701!GO:0009116;nucleoside metabolic process;0.0300422550304958!GO:0005521;lamin binding;0.0307671427710246!GO:0009113;purine base biosynthetic process;0.0311103627214344!GO:0006096;glycolysis;0.0311113636505394!GO:0043631;RNA polyadenylation;0.0313392982033366!GO:0000777;condensed chromosome kinetochore;0.0315479363778623!GO:0000779;condensed chromosome, pericentric region;0.0315479363778623!GO:0030695;GTPase regulator activity;0.0317864283084642!GO:0000097;sulfur amino acid biosynthetic process;0.0320239680377867!GO:0045045;secretory pathway;0.0322713217580358!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.0330157953390382!GO:0000084;S phase of mitotic cell cycle;0.0334787415626375!GO:0006984;ER-nuclear signaling pathway;0.0334787415626375!GO:0001832;blastocyst growth;0.0337485816398164!GO:0005758;mitochondrial intermembrane space;0.0350178157029855!GO:0005875;microtubule associated complex;0.0350864736778255!GO:0005784;translocon complex;0.0354321801978358!GO:0017134;fibroblast growth factor binding;0.0354499688182605!GO:0000080;G1 phase of mitotic cell cycle;0.0354962193538837!GO:0031252;leading edge;0.0363224634576896!GO:0008047;enzyme activator activity;0.036594873223588!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0371470675891066!GO:0016566;specific transcriptional repressor activity;0.0372912874374584!GO:0019318;hexose metabolic process;0.0376693883501877!GO:0006379;mRNA cleavage;0.0380732598663972!GO:0042162;telomeric DNA binding;0.0380732598663972!GO:0046983;protein dimerization activity;0.0380893944657495!GO:0004523;ribonuclease H activity;0.0381020497784309!GO:0006303;double-strand break repair via nonhomologous end joining;0.0382040971828709!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0383229092105115!GO:0015002;heme-copper terminal oxidase activity;0.0383229092105115!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0383229092105115!GO:0004129;cytochrome-c oxidase activity;0.0383229092105115!GO:0005689;U12-dependent spliceosome;0.0383349547882708!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0393014205229602!GO:0003709;RNA polymerase III transcription factor activity;0.0393273274349657!GO:0005996;monosaccharide metabolic process;0.0401502457901871!GO:0005092;GDP-dissociation inhibitor activity;0.0405044927905139!GO:0016455;RNA polymerase II transcription mediator activity;0.041593245400182!GO:0004672;protein kinase activity;0.0416659729187998!GO:0022890;inorganic cation transmembrane transporter activity;0.0416659729187998!GO:0008250;oligosaccharyl transferase complex;0.0420003000869315!GO:0006400;tRNA modification;0.0422542396154025!GO:0006519;amino acid and derivative metabolic process;0.0425368144501033!GO:0030118;clathrin coat;0.0428648758112946!GO:0008143;poly(A) binding;0.0428648758112946!GO:0050662;coenzyme binding;0.04313020951666!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0439760751401656!GO:0045502;dynein binding;0.0439863626277266!GO:0006610;ribosomal protein import into nucleus;0.0445701258788825!GO:0032405;MutLalpha complex binding;0.0447327279581699!GO:0007076;mitotic chromosome condensation;0.0447327279581699!GO:0003756;protein disulfide isomerase activity;0.0447977500105079!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0447977500105079!GO:0019238;cyclohydrolase activity;0.0449943905633972!GO:0019901;protein kinase binding;0.045034719829231!GO:0030174;regulation of DNA replication initiation;0.0454600315700708!GO:0030261;chromosome condensation;0.045652847194007!GO:0046488;phosphatidylinositol metabolic process;0.0458099362137761!GO:0046822;regulation of nucleocytoplasmic transport;0.0458099362137761!GO:0033558;protein deacetylase activity;0.0459599503957174!GO:0035267;NuA4 histone acetyltransferase complex;0.04618154704912!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.046250991510404!GO:0030036;actin cytoskeleton organization and biogenesis;0.0462550097104872!GO:0005869;dynactin complex;0.0464601889788228!GO:0031902;late endosome membrane;0.0465377122171118!GO:0005754;mitochondrial proton-transporting ATP synthase, catalytic core;0.0465749689981061!GO:0000275;mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);0.0465749689981061!GO:0045267;proton-transporting ATP synthase, catalytic core;0.0465749689981061!GO:0033205;cytokinesis during cell cycle;0.0467783711728281!GO:0008320;protein transmembrane transporter activity;0.0468148422295064!GO:0006541;glutamine metabolic process;0.0486767923507155!GO:0005487;nucleocytoplasmic transporter activity;0.0488243870184975!GO:0019206;nucleoside kinase activity;0.0493149190559539 | |||
|sample_id=10430 | |sample_id=10430 | ||
|sample_note=machine failed, remainder reloaded, low amount | |sample_note=machine failed, remainder reloaded, low amount | ||
| Line 76: | Line 98: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=MYB:3.81674188408;NKX2-1,4:2.66071084423;NFY{A,B,C}:2.6107857401;E2F1..5:2.33835059533;ALX1:2.20814539959;TOPORS:1.81809777453;EN1,2:1.72704648334;BREu{core}:1.71376337243;PBX1:1.66166269603;TFDP1:1.61760319026;BPTF:1.5458741974;PITX1..3:1.49516369046;CDX1,2,4:1.39770923449;ZNF143:1.3317411847;PAX8:1.32002892348;FOX{I1,J2}:1.3111120596;GFI1:1.2208565845;YY1:1.19722586948;ELF1,2,4:1.15043570252;NKX6-1,2:1.12368087788;SOX{8,9,10}:1.02266958714;IKZF2:1.02182832267;TGIF1:0.999350357155;NRF1:0.999152146076;FOXP1:0.943182602847;FOXD3:0.91471973644;SOX2:0.888507258282;STAT1,3:0.875910652894;RBPJ:0.848566451135;PAX3,7:0.837533229448;AIRE:0.820892290885;STAT5{A,B}:0.818879043779;DMAP1_NCOR{1,2}_SMARC:0.802176521612;SOX17:0.719361666366;FOXN1:0.696593084546;ELK1,4_GABP{A,B1}:0.645684285958;LMO2:0.623311784641;ARID5B:0.612821178658;RORA:0.598154860267;FOXQ1:0.568406700465;ZFP161:0.559509264446;POU3F1..4:0.556185071237;TEF:0.545316408844;FOX{F1,F2,J1}:0.539259198426;PAX4:0.535628519593;CUX2:0.512724316814;NANOG{mouse}:0.510131222362;FOXA2:0.489278717628;EVI1:0.485300755407;CREB1:0.48135071745;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.474739826304;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.470974501579;AR:0.461309935049;PDX1:0.416642700034;HOX{A4,D4}:0.403706110771;MYOD1:0.396439899608;ZNF384:0.390625119954;ZBTB16:0.386754173053;POU2F1..3:0.386721425682;IRF1,2:0.350836918923;CRX:0.345936558045;ONECUT1,2:0.330687791749;GATA6:0.329861051886;LHX3,4:0.306385304696;ATF5_CREB3:0.296609060668;HBP1_HMGB_SSRP1_UBTF:0.286688296945;FOXP3:0.241326062521;SPI1:0.238295935644;NANOG:0.229018257841;NFIX:0.228395173336;RUNX1..3:0.22075463197;SOX5:0.215958586691;FOXO1,3,4:0.209182935635;POU5F1:0.179574402666;SPIB:0.172912530071;RXR{A,B,G}:0.158204995294;NHLH1,2:0.140061494245;RREB1:0.131730883559;AHR_ARNT_ARNT2:0.118255173023;OCT4_SOX2{dimer}:0.107401871297;MTE{core}:0.102791137204;MEF2{A,B,C,D}:0.102062643306;DBP:0.101433899301;PATZ1:0.0894112003824;GCM1,2:0.0760312140027;LEF1_TCF7_TCF7L1,2:0.0583101323833;HAND1,2:0.0188120752766;POU6F1:-0.021391129715;PAX2:-0.0455223368665;CEBPA,B_DDIT3:-0.0610154755173;NKX2-2,8:-0.0699873569871;PRRX1,2:-0.0703740620195;XCPE1{core}:-0.0719824467696;RFX2..5_RFXANK_RFXAP:-0.0802906608074;HNF4A_NR2F1,2:-0.0959771979577;FOXM1:-0.102160496749;HIF1A:-0.107736454362;NFKB1_REL_RELA:-0.122982465588;ATF4:-0.123998172941;SNAI1..3:-0.139772556812;SREBF1,2:-0.141447763921;NR5A1,2:-0.150732650542;NKX2-3_NKX2-5:-0.158132980436;HIC1:-0.165681627958;ZEB1:-0.17438613608;HNF1A:-0.179624944525;ESR1:-0.200366297066;POU1F1:-0.203564583778;NKX3-2:-0.206611353112;HSF1,2:-0.211183065215;HOX{A6,A7,B6,B7}:-0.212406890477;SP1:-0.235121397435;CDC5L:-0.248806015819;ETS1,2:-0.267918996878;EBF1:-0.288114439508;GATA4:-0.302466223018;IRF7:-0.307588191044;VSX1,2:-0.3243732663;EGR1..3:-0.330451308747;HOX{A5,B5}:-0.338311271938;MAZ:-0.343884563127;PAX6:-0.351681962;FOX{D1,D2}:-0.381931627763;PPARG:-0.401351285779;FOXL1:-0.415340466184;TFAP2B:-0.425343421131;MZF1:-0.437208912467;KLF4:-0.443188386486;NR1H4:-0.453596111993;MYFfamily:-0.458048504493;bHLH_family:-0.496743153786;RXRA_VDR{dimer}:-0.508242516283;MED-1{core}:-0.515082049931;ADNP_IRX_SIX_ZHX:-0.543568276279;FOSL2:-0.571592576305;ZIC1..3:-0.597098758951;TAL1_TCF{3,4,12}:-0.620061488283;HES1:-0.62137590043;NFE2:-0.635606296873;UFEwm:-0.642748851863;RFX1:-0.644065633454;TLX2:-0.66428753394;HLF:-0.693826523581;BACH2:-0.699050498808;FOS_FOS{B,L1}_JUN{B,D}:-0.723584600288;PRDM1:-0.729482792992;JUN:-0.744962368011;GTF2I:-0.757178261979;ZBTB6:-0.775487326739;NFIL3:-0.781066190182;NFATC1..3:-0.791111597415;REST:-0.81309997277;TP53:-0.824382062657;T:-0.842820875128;MTF1:-0.846289430882;TFAP2{A,C}:-0.863445285161;MYBL2:-0.872672230726;ZNF148:-0.879132213433;NFE2L1:-0.885379641863;NKX3-1:-0.888163455679;PAX5:-0.902049148289;ATF2:-0.939554857923;XBP1:-0.986876243376;ESRRA:-1.02073566941;TBP:-1.02668058882;HOXA9_MEIS1:-1.03398288132;GFI1B:-1.05053343213;GZF1:-1.05499847976;ZNF238:-1.0576901664;TFAP4:-1.08649163715;SMAD1..7,9:-1.12958399833;TBX4,5:-1.1311468553;NR6A1:-1.1316560734;SPZ1:-1.13410990714;HMGA1,2:-1.16139508694;ALX4:-1.20295327724;MAFB:-1.22617340223;TEAD1:-1.24292827255;EP300:-1.27824323385;NR3C1:-1.30734747862;NFE2L2:-1.35749826854;TLX1..3_NFIC{dimer}:-1.41071713863;HMX1:-1.42208407702;SRF:-1.43007926665;STAT2,4,6:-1.4363022839;ATF6:-1.44340940334;IKZF1:-1.50432612954;PAX1,9:-1.53005686958;ZNF423:-1.53084509496;GTF2A1,2:-1.53487046777;TFCP2:-1.68178787234;GLI1..3:-1.88878958528 | |top_motifs=MYB:3.81674188408;NKX2-1,4:2.66071084423;NFY{A,B,C}:2.6107857401;E2F1..5:2.33835059533;ALX1:2.20814539959;TOPORS:1.81809777453;EN1,2:1.72704648334;BREu{core}:1.71376337243;PBX1:1.66166269603;TFDP1:1.61760319026;BPTF:1.5458741974;PITX1..3:1.49516369046;CDX1,2,4:1.39770923449;ZNF143:1.3317411847;PAX8:1.32002892348;FOX{I1,J2}:1.3111120596;GFI1:1.2208565845;YY1:1.19722586948;ELF1,2,4:1.15043570252;NKX6-1,2:1.12368087788;SOX{8,9,10}:1.02266958714;IKZF2:1.02182832267;TGIF1:0.999350357155;NRF1:0.999152146076;FOXP1:0.943182602847;FOXD3:0.91471973644;SOX2:0.888507258282;STAT1,3:0.875910652894;RBPJ:0.848566451135;PAX3,7:0.837533229448;AIRE:0.820892290885;STAT5{A,B}:0.818879043779;DMAP1_NCOR{1,2}_SMARC:0.802176521612;SOX17:0.719361666366;FOXN1:0.696593084546;ELK1,4_GABP{A,B1}:0.645684285958;LMO2:0.623311784641;ARID5B:0.612821178658;RORA:0.598154860267;FOXQ1:0.568406700465;ZFP161:0.559509264446;POU3F1..4:0.556185071237;TEF:0.545316408844;FOX{F1,F2,J1}:0.539259198426;PAX4:0.535628519593;CUX2:0.512724316814;NANOG{mouse}:0.510131222362;FOXA2:0.489278717628;EVI1:0.485300755407;CREB1:0.48135071745;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.474739826304;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.470974501579;AR:0.461309935049;PDX1:0.416642700034;HOX{A4,D4}:0.403706110771;MYOD1:0.396439899608;ZNF384:0.390625119954;ZBTB16:0.386754173053;POU2F1..3:0.386721425682;IRF1,2:0.350836918923;CRX:0.345936558045;ONECUT1,2:0.330687791749;GATA6:0.329861051886;LHX3,4:0.306385304696;ATF5_CREB3:0.296609060668;HBP1_HMGB_SSRP1_UBTF:0.286688296945;FOXP3:0.241326062521;SPI1:0.238295935644;NANOG:0.229018257841;NFIX:0.228395173336;RUNX1..3:0.22075463197;SOX5:0.215958586691;FOXO1,3,4:0.209182935635;POU5F1:0.179574402666;SPIB:0.172912530071;RXR{A,B,G}:0.158204995294;NHLH1,2:0.140061494245;RREB1:0.131730883559;AHR_ARNT_ARNT2:0.118255173023;OCT4_SOX2{dimer}:0.107401871297;MTE{core}:0.102791137204;MEF2{A,B,C,D}:0.102062643306;DBP:0.101433899301;PATZ1:0.0894112003824;GCM1,2:0.0760312140027;LEF1_TCF7_TCF7L1,2:0.0583101323833;HAND1,2:0.0188120752766;POU6F1:-0.021391129715;PAX2:-0.0455223368665;CEBPA,B_DDIT3:-0.0610154755173;NKX2-2,8:-0.0699873569871;PRRX1,2:-0.0703740620195;XCPE1{core}:-0.0719824467696;RFX2..5_RFXANK_RFXAP:-0.0802906608074;HNF4A_NR2F1,2:-0.0959771979577;FOXM1:-0.102160496749;HIF1A:-0.107736454362;NFKB1_REL_RELA:-0.122982465588;ATF4:-0.123998172941;SNAI1..3:-0.139772556812;SREBF1,2:-0.141447763921;NR5A1,2:-0.150732650542;NKX2-3_NKX2-5:-0.158132980436;HIC1:-0.165681627958;ZEB1:-0.17438613608;HNF1A:-0.179624944525;ESR1:-0.200366297066;POU1F1:-0.203564583778;NKX3-2:-0.206611353112;HSF1,2:-0.211183065215;HOX{A6,A7,B6,B7}:-0.212406890477;SP1:-0.235121397435;CDC5L:-0.248806015819;ETS1,2:-0.267918996878;EBF1:-0.288114439508;GATA4:-0.302466223018;IRF7:-0.307588191044;VSX1,2:-0.3243732663;EGR1..3:-0.330451308747;HOX{A5,B5}:-0.338311271938;MAZ:-0.343884563127;PAX6:-0.351681962;FOX{D1,D2}:-0.381931627763;PPARG:-0.401351285779;FOXL1:-0.415340466184;TFAP2B:-0.425343421131;MZF1:-0.437208912467;KLF4:-0.443188386486;NR1H4:-0.453596111993;MYFfamily:-0.458048504493;bHLH_family:-0.496743153786;RXRA_VDR{dimer}:-0.508242516283;MED-1{core}:-0.515082049931;ADNP_IRX_SIX_ZHX:-0.543568276279;FOSL2:-0.571592576305;ZIC1..3:-0.597098758951;TAL1_TCF{3,4,12}:-0.620061488283;HES1:-0.62137590043;NFE2:-0.635606296873;UFEwm:-0.642748851863;RFX1:-0.644065633454;TLX2:-0.66428753394;HLF:-0.693826523581;BACH2:-0.699050498808;FOS_FOS{B,L1}_JUN{B,D}:-0.723584600288;PRDM1:-0.729482792992;JUN:-0.744962368011;GTF2I:-0.757178261979;ZBTB6:-0.775487326739;NFIL3:-0.781066190182;NFATC1..3:-0.791111597415;REST:-0.81309997277;TP53:-0.824382062657;T:-0.842820875128;MTF1:-0.846289430882;TFAP2{A,C}:-0.863445285161;MYBL2:-0.872672230726;ZNF148:-0.879132213433;NFE2L1:-0.885379641863;NKX3-1:-0.888163455679;PAX5:-0.902049148289;ATF2:-0.939554857923;XBP1:-0.986876243376;ESRRA:-1.02073566941;TBP:-1.02668058882;HOXA9_MEIS1:-1.03398288132;GFI1B:-1.05053343213;GZF1:-1.05499847976;ZNF238:-1.0576901664;TFAP4:-1.08649163715;SMAD1..7,9:-1.12958399833;TBX4,5:-1.1311468553;NR6A1:-1.1316560734;SPZ1:-1.13410990714;HMGA1,2:-1.16139508694;ALX4:-1.20295327724;MAFB:-1.22617340223;TEAD1:-1.24292827255;EP300:-1.27824323385;NR3C1:-1.30734747862;NFE2L2:-1.35749826854;TLX1..3_NFIC{dimer}:-1.41071713863;HMX1:-1.42208407702;SRF:-1.43007926665;STAT2,4,6:-1.4363022839;ATF6:-1.44340940334;IKZF1:-1.50432612954;PAX1,9:-1.53005686958;ZNF423:-1.53084509496;GTF2A1,2:-1.53487046777;TFCP2:-1.68178787234;GLI1..3:-1.88878958528 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10430-106D7;search_select_hide=table117:FF:10430-106D7 | |||
}} | }} | ||
Latest revision as of 14:01, 3 June 2020
| Name: | non T non B acute lymphoblastic leukemia (ALL) cell line:P30/OHK |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10747 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10747
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10747
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.495 |
| 10 | 10 | 0.555 |
| 100 | 100 | 0.775 |
| 101 | 101 | 0.839 |
| 102 | 102 | 0.779 |
| 103 | 103 | 0.303 |
| 104 | 104 | 0.689 |
| 105 | 105 | 0.229 |
| 106 | 106 | 0.0922 |
| 107 | 107 | 0.04 |
| 108 | 108 | 0.27 |
| 109 | 109 | 0.438 |
| 11 | 11 | 0.438 |
| 110 | 110 | 0.372 |
| 111 | 111 | 0.459 |
| 112 | 112 | 0.095 |
| 113 | 113 | 0.682 |
| 114 | 114 | 0.124 |
| 115 | 115 | 0.337 |
| 116 | 116 | 0.159 |
| 117 | 117 | 0.392 |
| 118 | 118 | 0.588 |
| 119 | 119 | 0.11 |
| 12 | 12 | 0.452 |
| 120 | 120 | 0.868 |
| 121 | 121 | 0.487 |
| 122 | 122 | 0.823 |
| 123 | 123 | 0.141 |
| 124 | 124 | 0.503 |
| 125 | 125 | 0.565 |
| 126 | 126 | 0.986 |
| 127 | 127 | 0.704 |
| 128 | 128 | 0.147 |
| 129 | 129 | 0.423 |
| 13 | 13 | 0.541 |
| 130 | 130 | 0.386 |
| 131 | 131 | 0.0199 |
| 132 | 132 | 0.344 |
| 133 | 133 | 0.282 |
| 134 | 134 | 0.701 |
| 135 | 135 | 0.365 |
| 136 | 136 | 0.375 |
| 137 | 137 | 0.512 |
| 138 | 138 | 0.823 |
| 139 | 139 | 0.0161 |
| 14 | 14 | 0.907 |
| 140 | 140 | 0.98 |
| 141 | 141 | 0.723 |
| 142 | 142 | 0.795 |
| 143 | 143 | 0.489 |
| 144 | 144 | 0.655 |
| 145 | 145 | 0.328 |
| 146 | 146 | 0.761 |
| 147 | 147 | 0.251 |
| 148 | 148 | 0.0649 |
| 149 | 149 | 0.0413 |
| 15 | 15 | 0.607 |
| 150 | 150 | 0.927 |
| 151 | 151 | 0.227 |
| 152 | 152 | 0.024 |
| 153 | 153 | 0.992 |
| 154 | 154 | 0.769 |
| 155 | 155 | 0.0476 |
| 156 | 156 | 0.646 |
| 157 | 157 | 0.484 |
| 158 | 158 | 0.585 |
| 159 | 159 | 0.229 |
| 16 | 16 | 0.12 |
| 160 | 160 | 0.224 |
| 161 | 161 | 0.934 |
| 162 | 162 | 0.624 |
| 163 | 163 | 0.786 |
| 164 | 164 | 0.672 |
| 165 | 165 | 0.448 |
| 166 | 166 | 0.488 |
| 167 | 167 | 0.531 |
| 168 | 168 | 0.865 |
| 169 | 169 | 0.0211 |
| 17 | 17 | 0.106 |
| 18 | 18 | 0.13 |
| 19 | 19 | 0.0643 |
| 2 | 2 | 0.163 |
| 20 | 20 | 0.289 |
| 21 | 21 | 0.876 |
| 22 | 22 | 0.106 |
| 23 | 23 | 0.00167 |
| 24 | 24 | 0.317 |
| 25 | 25 | 0.666 |
| 26 | 26 | 0.978 |
| 27 | 27 | 0.417 |
| 28 | 28 | 0.544 |
| 29 | 29 | 0.436 |
| 3 | 3 | 0.44 |
| 30 | 30 | 0.197 |
| 31 | 31 | 0.147 |
| 32 | 32 | 0.00752 |
| 33 | 33 | 0.735 |
| 34 | 34 | 0.241 |
| 35 | 35 | 0.651 |
| 36 | 36 | 0.365 |
| 37 | 37 | 0.177 |
| 38 | 38 | 0.226 |
| 39 | 39 | 0.101 |
| 4 | 4 | 0.281 |
| 40 | 40 | 0.669 |
| 41 | 41 | 0.506 |
| 42 | 42 | 0.949 |
| 43 | 43 | 0.187 |
| 44 | 44 | 0.409 |
| 45 | 45 | 0.17 |
| 46 | 46 | 0.635 |
| 47 | 47 | 0.869 |
| 48 | 48 | 0.54 |
| 49 | 49 | 0.614 |
| 5 | 5 | 0.473 |
| 50 | 50 | 0.88 |
| 51 | 51 | 0.386 |
| 52 | 52 | 0.0857 |
| 53 | 53 | 0.922 |
| 54 | 54 | 0.286 |
| 55 | 55 | 0.0369 |
| 56 | 56 | 0.519 |
| 57 | 57 | 0.911 |
| 58 | 58 | 0.917 |
| 59 | 59 | 0.0758 |
| 6 | 6 | 0.663 |
| 60 | 60 | 0.0627 |
| 61 | 61 | 0.56 |
| 62 | 62 | 0.658 |
| 63 | 63 | 0.371 |
| 64 | 64 | 0.74 |
| 65 | 65 | 0.0221 |
| 66 | 66 | 0.00326 |
| 67 | 67 | 0.817 |
| 68 | 68 | 0.519 |
| 69 | 69 | 0.751 |
| 7 | 7 | 0.828 |
| 70 | 70 | 0.00834 |
| 71 | 71 | 0.386 |
| 72 | 72 | 0.554 |
| 73 | 73 | 0.0327 |
| 74 | 74 | 0.543 |
| 75 | 75 | 0.601 |
| 76 | 76 | 0.869 |
| 77 | 77 | 0.00651 |
| 78 | 78 | 0.682 |
| 79 | 79 | 0.276 |
| 8 | 8 | 0.291 |
| 80 | 80 | 0.788 |
| 81 | 81 | 0.504 |
| 82 | 82 | 0.0273 |
| 83 | 83 | 0.118 |
| 84 | 84 | 0.9 |
| 85 | 85 | 0.00125 |
| 86 | 86 | 0.624 |
| 87 | 87 | 0.5 |
| 88 | 88 | 0.582 |
| 89 | 89 | 0.0248 |
| 9 | 9 | 0.205 |
| 90 | 90 | 0.614 |
| 91 | 91 | 0.142 |
| 92 | 92 | 0.0107 |
| 93 | 93 | 0.672 |
| 94 | 94 | 0.412 |
| 95 | 95 | 0.774 |
| 96 | 96 | 0.614 |
| 97 | 97 | 0.181 |
| 98 | 98 | 0.587 |
| 99 | 99 | 0.274 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10747
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000003 cell line sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
