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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0001007,UBERON:0001062,UBERON:0001555,UBERON:0002050,UBERON:0002532,UBERON:0004119,UBERON:0004185,UBERON:0004921,UBERON:0005423,UBERON:0006562,UBERON:0007026
|DRA_sample_Accession=CAGE@SAMD00005900
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000255,CL:0000548
|accession_numbers=CAGE;DRX007984;DRR008856;DRZ000281;DRZ001666;DRZ011631;DRZ013016
|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:305,DOID:4,DOID:7
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0006562,UBERON:0001007,UBERON:0004119,UBERON:0011216,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0001555
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000255,CL:0002076,CL:0002251
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:7,DOID:305
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0100819,FF:0100790,FF:0100834
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr11:34642612..34642646,+!p1@EHF!2.68!474.64!EHF;;chr1:201979743..201979762,+!p1@ELF3!2.03!105.02!ELF3;;chr6:126240442..126240459,+!p4@NCOA7!1.92!103.74!NCOA7;;chr11:34642656..34642667,+!p2@EHF!1.90!78.96!EHF;;chr6:1312325..1312340,+!p1@FOXQ1!1.89!123.04!FOXQ1;;chr1:201979703..201979721,+!p2@ELF3!1.81!63.24!ELF3;;chr14:38064429..38064486,-!p1@FOXA1!1.67!45.74!FOXA1;;chr6:126240380..126240430,+!p2@NCOA7!1.65!108.85!NCOA7;;chr1:209979467..209979494,-!p1@IRF6!1.63!46.25!IRF6;;chr2:176969228..176969260,+!p1@HOXD11!1.63!41.40!HOXD11;;chr8:102504651..102504683,+!p1@GRHL2!1.61!39.99!GRHL2;;chr5:2751762..2751784,-!p1@IRX2!1.57!36.16!IRX2;;chr12:54785074..54785122,-!p2@ZNF385A!1.56!53.66!ZNF385A;;chr12:54785054..54785072,-!p4@ZNF385A!1.56!39.48!ZNF385A;;chr6:126240463..126240489,+!p6@NCOA7!1.55!38.33!NCOA7;;chr1:209979411..209979433,-!p2@IRF6!1.51!31.69!IRF6;;chr3:181429704..181429722,+!p1@SOX2!1.43!25.68!SOX2;;chr3:189507432..189507459,+!p1@TP63!1.37!22.36!TP63;;chr17:7493405..7493419,-!p1@SOX15!1.37!22.23!SOX15;;chr20:55204351..55204377,+!p1@TFAP2C!1.35!26.83!TFAP2C;;chr15:83953397..83953425,-!p1@BNC1!1.34!24.15!BNC1;;chr14:37131058..37131139,+!p1@PAX9!1.28!18.14!PAX9;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.25!16.74!ZBED1;;chr11:129245526..129245553,+!p1@BARX2!1.23!16.10!BARX2;;chr7:27153454..27153469,-!p2@HOXA3!1.23!15.97!HOXA3;;chr6:34524093..34524135,-!p1@SPDEF!1.22!15.71!SPDEF;;chr2:46524897..46524911,+!p2@EPAS1!1.19!40.63!EPAS1;;chr2:176969179..176969226,+!p2@HOXD11!1.19!14.56!HOXD11;;chr22:19748231..19748317,+!p1@TBX1!1.16!13.42!TBX1;;chr8:102504690..102504704,+!p3@GRHL2!1.12!12.27!GRHL2;;chr11:129245736..129245758,+!p2@BARX2!1.12!12.27!BARX2;;chr3:181429741..181429767,+!p2@SOX2!1.11!11.88!SOX2;;chr6:126240356..126240379,+!p7@NCOA7!1.08!13.54!NCOA7;;chr6:10413188..10413249,-!p7@TFAP2A!1.07!10.73!TFAP2A;;chr13:73633131..73633149,+!p1@KLF5!1.06!113.96!KLF5;;chr17:7492684..7492778,-!p2@SOX15!1.06!22.10!SOX15;;chr3:168864315..168864339,-!p2@MECOM!1.06!17.25!MECOM;;chr19:9811347..9811351,-!p1@ZNF812!1.06!10.60!ZNF812;;chr10:48355030..48355090,+!p1@ZNF488!1.05!13.29!ZNF488;;chr17:80797886..80797906,-!p1@ZNF750!1.05!10.35!ZNF750;;chr5:2751785..2751808,-!p2@IRX2!1.05!10.22!IRX2;;chr6:126240542..126240553,+!p14@NCOA7!1.05!10.09!NCOA7;;chr2:60780753..60780800,-!p1@BCL11A!1.03!48.93!BCL11A;;chr5:137804484..137804498,+!p2@EGR1!1.03!39.73!EGR1;;chr6:126240490..126240501,+!p11@NCOA7!1.02!9.45!NCOA7;;chr5:134369905..134369972,-!p1@PITX1!1.01!14.31!PITX1;;chr7:96654133..96654150,-!p1@DLX5!1.01!9.20!DLX5;;chr6:34524049..34524089,-!p2@SPDEF!0.98!8.56!SPDEF;;chr17:46687959..46688007,-!p2@HOXB7!0.97!11.75!HOXB7;;chr8:102504979..102505010,+!p2@GRHL2!0.97!8.30!GRHL2;;chr2:60780607..60780624,-!p2@BCL11A!0.95!24.91!BCL11A;;chr7:27196267..27196311,-!p1@HOXA7!0.95!7.92!HOXA7;;chr8:10588010..10588030,-!p1@SOX7!0.92!7.28!SOX7;;chr1:935398..935465,-!p2@HES4!0.91!15.20!HES4;;chr1:37940170..37940190,+!p1@ZC3H12A!0.90!89.69!ZC3H12A;;chr12:27485762..27485776,+!p3@ARNTL2!0.90!19.29!ARNTL2;;chr6:10412392..10412409,-!p4@TFAP2A!0.90!8.05!TFAP2A;;chr1:6479968..6479986,-!p1@HES2!0.90!7.03!HES2;;chr20:30193083..30193098,+!p1@ID1!0.89!577.49!ID1;;chr15:67418047..67418093,+!p4@SMAD3!0.89!8.69!SMAD3;;chr5:137801160..137801176,+!p1@EGR1!0.88!683.40!EGR1;;chr12:53625966..53626012,-!p2@RARG!0.87!17.89!RARG;;chr9:132427972..132428056,+!p1@PRRX2!0.87!8.43!PRRX2;;chr5:137804405..137804444,+!p3@EGR1!0.87!7.79!EGR1;;chr5:137804357..137804390,+!p4@EGR1!0.87!7.67!EGR1;;chr6:36355513..36355578,-!p2@ETV7!0.86!8.05!ETV7;;chr15:96869511..96869525,+!p16@NR2F2!0.86!7.03!NR2F2;;chr6:10412600..10412637,-!p1@TFAP2A!0.85!10.48!TFAP2A;;chr20:50721803..50721857,-!p2@ZFP64!0.85!9.97!ZFP64;;chr3:169381420..169381535,-!p1@MECOM!0.85!7.28!MECOM;;chr6:28321971..28321995,-!p1@ZNF323!0.85!6.13!ZNF323;;chr1:935467..935484,-!p1@HES4!0.84!27.98!HES4;;chr15:96869255..96869291,+!p6@NR2F2!0.84!11.24!NR2F2;;chr6:10415276..10415341,-!p2@TFAP2A!0.84!7.41!TFAP2A;;chr14:37051798..37051831,-!p1@NKX2-8!0.84!5.88!NKX2-8;;chr5:134369879..134369898,-!p2@PITX1!0.83!5.75!PITX1;;chr7:96654026..96654061,-!p2@DLX5!0.83!5.75!DLX5;;chr3:193853927..193853944,+!p1@HES1!0.82!194.84!HES1;;chr12:80084737..80084763,-!p3@PAWR!0.82!22.36!PAWR;;chr18:19749541..19749557,+!p1@GATA6!0.82!18.53!GATA6;;chr6:34524025..34524045,-!p3@SPDEF!0.82!5.62!SPDEF;;chr6:21593973..21593988,+!p1@SOX4!0.81!212.09!SOX4;;chr6:1610293..1610310,+!p1@FOXC1!0.81!9.58!FOXC1;;chr1:158985493..158985535,+!p4@IFI16!0.81!8.56!IFI16;;chr2:176994408..176994492,+!p1@HOXD8!0.81!5.49!HOXD8;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.80!58.00!GLIS2;;chr14:38064590..38064606,-!p2@FOXA1!0.80!5.24!FOXA1;;chr2:46524878..46524891,+!p3@EPAS1!0.79!9.58!EPAS1;;chr12:125002827..125002855,-!p5@NCOR2!0.79!7.54!NCOR2;;chr11:120107344..120107351,+!p1@POU2F3!0.79!6.39!POU2F3;;chr7:27142290..27142310,-!p1@HOXA2!0.79!5.11!HOXA2;;chr12:54332608..54332636,+!p1@HOXC13!0.78!4.98!HOXC13;;chr14:75894714..75894733,+!p1@JDP2!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|ffid_belonging_in_development=CL:0000223,UBERON:0002532,UBERON:0006595,UBERON:0010316
|fonse_cell_line=FF:0100819,FF:0101120
|fonse_cell_line=FF:0100819,FF:0101120
|fonse_cell_line_closure=FF:0100819,FF:0101120
|fonse_cell_line_closure=FF:0100819,FF:0101120
Line 35: Line 41:
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|id=FF:10723-110A3
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|name=pharyngeal carcinoma cell line:Detroit 562
|name=pharyngeal carcinoma cell line:Detroit 562
|namespace=FANTOM5
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Line 42: Line 60:
|profile_cagescan=,,,
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Line 57: Line 78:
|rna_weight_ug=61.38059
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Line 69: Line 91:
|sample_ethnicity=C
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|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.89758288719738e-213!GO:0005737;cytoplasm;3.41790673243784e-194!GO:0043226;organelle;1.81448642000667e-166!GO:0043229;intracellular organelle;7.92254648300214e-166!GO:0043231;intracellular membrane-bound organelle;2.78712255551348e-165!GO:0043227;membrane-bound organelle;3.26881152235816e-165!GO:0044422;organelle part;1.3056625428217e-134!GO:0044444;cytoplasmic part;1.62922565898836e-134!GO:0044446;intracellular organelle part;4.96813049900979e-133!GO:0032991;macromolecular complex;9.65458054957321e-92!GO:0005515;protein binding;2.2433990559806e-82!GO:0030529;ribonucleoprotein complex;9.28092793898024e-78!GO:0044237;cellular metabolic process;1.55287313469792e-73!GO:0044238;primary metabolic process;3.16614360605238e-72!GO:0005739;mitochondrion;1.09235673889547e-67!GO:0043170;macromolecule metabolic process;3.38253342150429e-66!GO:0003723;RNA binding;8.73603898437474e-63!GO:0043233;organelle lumen;1.87447256925947e-62!GO:0031974;membrane-enclosed lumen;1.87447256925947e-62!GO:0044428;nuclear part;3.73297413284949e-61!GO:0031090;organelle membrane;6.60804178590698e-55!GO:0019538;protein metabolic process;1.35616431880496e-54!GO:0005634;nucleus;1.90631611865961e-54!GO:0044267;cellular protein metabolic process;2.55721037432683e-48!GO:0005840;ribosome;2.55721037432683e-48!GO:0044260;cellular macromolecule metabolic process;6.78496238850142e-48!GO:0043234;protein complex;3.32492855754032e-46!GO:0016043;cellular component organization and biogenesis;3.54559781904692e-46!GO:0006412;translation;1.35293211753617e-45!GO:0033036;macromolecule localization;9.22902984216457e-44!GO:0015031;protein transport;5.34683661525715e-43!GO:0006396;RNA processing;2.04073979915072e-42!GO:0044429;mitochondrial part;2.55364993911394e-42!GO:0009058;biosynthetic process;6.27528201620706e-42!GO:0003735;structural constituent of ribosome;1.57857851116991e-41!GO:0008104;protein localization;8.59780623300044e-41!GO:0045184;establishment of protein localization;3.03117141233151e-40!GO:0009059;macromolecule biosynthetic process;7.73341112857441e-40!GO:0005829;cytosol;8.98419858872757e-40!GO:0044249;cellular biosynthetic process;4.08991411959948e-38!GO:0031967;organelle envelope;9.7750696562893e-38!GO:0031975;envelope;1.90660651002327e-37!GO:0031981;nuclear lumen;3.81581869103316e-36!GO:0033279;ribosomal subunit;2.08463528150354e-35!GO:0043283;biopolymer metabolic process;5.44286802288478e-34!GO:0046907;intracellular transport;1.7393871542647e-33!GO:0016071;mRNA metabolic process;3.12568587660271e-33!GO:0008380;RNA splicing;6.26947304860948e-30!GO:0043228;non-membrane-bound organelle;6.45357752261826e-30!GO:0043232;intracellular non-membrane-bound organelle;6.45357752261826e-30!GO:0065003;macromolecular complex assembly;7.64896838215176e-30!GO:0006886;intracellular protein transport;1.79485928544301e-29!GO:0006397;mRNA processing;4.62573338576857e-28!GO:0006996;organelle organization and biogenesis;6.76654590132458e-28!GO:0005740;mitochondrial envelope;5.08768973603647e-27!GO:0022607;cellular component assembly;7.77131336633611e-26!GO:0019866;organelle inner membrane;2.28509879269867e-25!GO:0031966;mitochondrial membrane;2.6679980085432e-25!GO:0006259;DNA metabolic process;8.24385545501067e-25!GO:0012505;endomembrane system;1.06714257671641e-24!GO:0010467;gene expression;2.01656337061427e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.28428415101763e-24!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.17983551537669e-24!GO:0051649;establishment of cellular localization;3.0566078849768e-23!GO:0005743;mitochondrial inner membrane;3.06803813186588e-23!GO:0005654;nucleoplasm;3.40777179075281e-23!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.06061639796289e-23!GO:0051641;cellular localization;9.26006513497546e-23!GO:0006119;oxidative phosphorylation;5.10397178246219e-22!GO:0005681;spliceosome;7.6438004242451e-22!GO:0000166;nucleotide binding;1.96270636619725e-21!GO:0044445;cytosolic part;2.28982136227229e-20!GO:0005783;endoplasmic reticulum;3.42655817911469e-20!GO:0044455;mitochondrial membrane part;8.68944830882246e-20!GO:0015934;large ribosomal subunit;1.77749583507479e-19!GO:0007049;cell cycle;2.05102446736156e-19!GO:0044451;nucleoplasm part;3.98003424014639e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.93218215634829e-18!GO:0016462;pyrophosphatase activity;1.93218215634829e-18!GO:0048770;pigment granule;2.39878962318831e-18!GO:0042470;melanosome;2.39878962318831e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.55708615976371e-18!GO:0016874;ligase activity;3.21765003227324e-18!GO:0043285;biopolymer catabolic process;3.84803025819994e-18!GO:0031980;mitochondrial lumen;4.29551554311224e-18!GO:0005759;mitochondrial matrix;4.29551554311224e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;4.418456606924e-18!GO:0017111;nucleoside-triphosphatase activity;4.85007105693448e-18!GO:0019941;modification-dependent protein catabolic process;5.59773424638291e-18!GO:0043632;modification-dependent macromolecule catabolic process;5.59773424638291e-18!GO:0006457;protein folding;7.65049912381649e-18!GO:0006511;ubiquitin-dependent protein catabolic process;1.03204145991228e-17!GO:0044257;cellular protein catabolic process;1.65502193919068e-17!GO:0044265;cellular macromolecule catabolic process;1.7322058631101e-17!GO:0030163;protein catabolic process;2.26217952295103e-17!GO:0043412;biopolymer modification;6.01806856339507e-17!GO:0015935;small ribosomal subunit;6.21990763313069e-17!GO:0005794;Golgi apparatus;7.17722724276961e-17!GO:0044432;endoplasmic reticulum part;7.62117917566231e-17!GO:0009057;macromolecule catabolic process;9.16032708660057e-17!GO:0008134;transcription factor binding;1.12183916674514e-16!GO:0005746;mitochondrial respiratory chain;3.73242935185135e-16!GO:0006512;ubiquitin cycle;4.08351191753707e-16!GO:0000502;proteasome complex (sensu Eukaryota);4.31394322505222e-16!GO:0006605;protein targeting;5.99392359515854e-16!GO:0012501;programmed cell death;6.79312687153041e-16!GO:0006915;apoptosis;1.22671971061001e-15!GO:0005761;mitochondrial ribosome;1.41413672132494e-15!GO:0000313;organellar ribosome;1.41413672132494e-15!GO:0051186;cofactor metabolic process;2.79413027132386e-15!GO:0006464;protein modification process;3.51397804996564e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.526198071041e-15!GO:0017076;purine nucleotide binding;4.11287543752899e-15!GO:0022618;protein-RNA complex assembly;4.83738985933834e-15!GO:0050136;NADH dehydrogenase (quinone) activity;5.26305804580709e-15!GO:0003954;NADH dehydrogenase activity;5.26305804580709e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.26305804580709e-15!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.39067199326923e-14!GO:0032553;ribonucleotide binding;3.0326735543236e-14!GO:0032555;purine ribonucleotide binding;3.0326735543236e-14!GO:0044248;cellular catabolic process;3.21768084371257e-14!GO:0022402;cell cycle process;3.39879076444069e-14!GO:0006974;response to DNA damage stimulus;3.47266494457565e-14!GO:0008219;cell death;9.62213166679643e-14!GO:0016265;death;9.62213166679643e-14!GO:0005730;nucleolus;2.74250974335375e-13!GO:0005694;chromosome;3.74309896280286e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.77341068853416e-13!GO:0006732;coenzyme metabolic process;3.84629761263486e-13!GO:0048193;Golgi vesicle transport;3.9784053813757e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.26303565999428e-13!GO:0051082;unfolded protein binding;5.00867142438107e-13!GO:0030964;NADH dehydrogenase complex (quinone);5.94908451087788e-13!GO:0045271;respiratory chain complex I;5.94908451087788e-13!GO:0005747;mitochondrial respiratory chain complex I;5.94908451087788e-13!GO:0042775;organelle ATP synthesis coupled electron transport;6.20023600342767e-13!GO:0042773;ATP synthesis coupled electron transport;6.20023600342767e-13!GO:0009055;electron carrier activity;6.21109186154186e-13!GO:0005789;endoplasmic reticulum membrane;9.17263387841401e-13!GO:0000278;mitotic cell cycle;1.06729451868978e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.85918432207269e-12!GO:0006366;transcription from RNA polymerase II promoter;2.30696921239724e-12!GO:0008135;translation factor activity, nucleic acid binding;2.67496399483835e-12!GO:0030554;adenyl nucleotide binding;3.1202272010363e-12!GO:0016192;vesicle-mediated transport;7.44821345440072e-12!GO:0043687;post-translational protein modification;8.96156941917934e-12!GO:0005524;ATP binding;1.37026591632457e-11!GO:0032559;adenyl ribonucleotide binding;1.64443849009776e-11!GO:0044427;chromosomal part;1.77278058836797e-11!GO:0006281;DNA repair;2.63145343455929e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;2.63145343455929e-11!GO:0000375;RNA splicing, via transesterification reactions;2.63145343455929e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.63145343455929e-11!GO:0005635;nuclear envelope;2.71583120792464e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.17058890206729e-11!GO:0009719;response to endogenous stimulus;8.55336787174202e-11!GO:0006461;protein complex assembly;1.00487244784387e-10!GO:0043067;regulation of programmed cell death;1.12893528575882e-10!GO:0051276;chromosome organization and biogenesis;1.18209448808751e-10!GO:0042981;regulation of apoptosis;1.30906125741703e-10!GO:0031965;nuclear membrane;1.44446367189402e-10!GO:0016887;ATPase activity;1.73408570228481e-10!GO:0008639;small protein conjugating enzyme activity;2.171402347094e-10!GO:0006260;DNA replication;2.20557090025093e-10!GO:0044453;nuclear membrane part;2.54604702697855e-10!GO:0006913;nucleocytoplasmic transport;2.71494406801064e-10!GO:0042254;ribosome biogenesis and assembly;3.08242542516468e-10!GO:0003743;translation initiation factor activity;3.84996439177061e-10!GO:0004842;ubiquitin-protein ligase activity;4.06782371289641e-10!GO:0048523;negative regulation of cellular process;4.10524924950951e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.52037132811208e-10!GO:0003712;transcription cofactor activity;5.13543467865264e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;5.60776590555673e-10!GO:0051169;nuclear transport;6.45098875569537e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.4584123319619e-10!GO:0008565;protein transporter activity;7.21988167498511e-10!GO:0042623;ATPase activity, coupled;8.0507506471887e-10!GO:0000074;regulation of progression through cell cycle;9.95835697325944e-10!GO:0019787;small conjugating protein ligase activity;1.00460836445628e-09!GO:0051726;regulation of cell cycle;1.11042113006492e-09!GO:0003676;nucleic acid binding;1.13507474282478e-09!GO:0006413;translational initiation;2.16856028169522e-09!GO:0006446;regulation of translational initiation;2.18525662178516e-09!GO:0006323;DNA packaging;2.25105902032396e-09!GO:0051188;cofactor biosynthetic process;2.40776527348568e-09!GO:0016604;nuclear body;3.43072656183941e-09!GO:0044431;Golgi apparatus part;4.29431573194668e-09!GO:0000087;M phase of mitotic cell cycle;4.74372508289021e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.70508771558355e-09!GO:0009056;catabolic process;5.82688331933851e-09!GO:0007067;mitosis;6.6323780673589e-09!GO:0006399;tRNA metabolic process;7.10630647848279e-09!GO:0005793;ER-Golgi intermediate compartment;8.49711304781719e-09!GO:0048519;negative regulation of biological process;8.95219545003235e-09!GO:0017038;protein import;1.27337449245107e-08!GO:0000785;chromatin;1.33906079085217e-08!GO:0016881;acid-amino acid ligase activity;1.47530071786517e-08!GO:0051301;cell division;1.6542214497695e-08!GO:0015986;ATP synthesis coupled proton transport;2.14189891899607e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.14189891899607e-08!GO:0005643;nuclear pore;2.22467971757377e-08!GO:0022403;cell cycle phase;2.36271835575107e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.44099599921763e-08!GO:0005768;endosome;3.42181329447888e-08!GO:0004386;helicase activity;3.67671855122958e-08!GO:0009108;coenzyme biosynthetic process;3.69060879313675e-08!GO:0007005;mitochondrion organization and biogenesis;4.97288204026138e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.86313534819946e-08!GO:0019829;cation-transporting ATPase activity;6.32080810762107e-08!GO:0065002;intracellular protein transport across a membrane;6.40158587224306e-08!GO:0016070;RNA metabolic process;6.52820352060701e-08!GO:0009060;aerobic respiration;9.81646090617905e-08!GO:0043069;negative regulation of programmed cell death;1.01188531626438e-07!GO:0016787;hydrolase activity;1.03173118306037e-07!GO:0032446;protein modification by small protein conjugation;1.11685945733962e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.33710163637804e-07!GO:0000139;Golgi membrane;1.44204306725207e-07!GO:0006163;purine nucleotide metabolic process;1.49513830405014e-07!GO:0005773;vacuole;1.6102788647344e-07!GO:0016567;protein ubiquitination;1.75508209827452e-07!GO:0009259;ribonucleotide metabolic process;2.0613838425118e-07!GO:0050657;nucleic acid transport;2.07706798724056e-07!GO:0051236;establishment of RNA localization;2.07706798724056e-07!GO:0050658;RNA transport;2.07706798724056e-07!GO:0006793;phosphorus metabolic process;2.34103398965998e-07!GO:0006796;phosphate metabolic process;2.34103398965998e-07!GO:0051246;regulation of protein metabolic process;2.44174799431032e-07!GO:0043066;negative regulation of apoptosis;2.47213464968855e-07!GO:0043566;structure-specific DNA binding;2.53317697368528e-07!GO:0048522;positive regulation of cellular process;2.83505075253197e-07!GO:0006403;RNA localization;2.88360732566408e-07!GO:0006164;purine nucleotide biosynthetic process;2.98496427367054e-07!GO:0005839;proteasome core complex (sensu Eukaryota);3.20806572615335e-07!GO:0016491;oxidoreductase activity;3.32704320294302e-07!GO:0008026;ATP-dependent helicase activity;3.32774276932003e-07!GO:0016740;transferase activity;3.50121490570597e-07!GO:0006754;ATP biosynthetic process;3.82797865109842e-07!GO:0006753;nucleoside phosphate metabolic process;3.82797865109842e-07!GO:0000323;lytic vacuole;3.98387641450922e-07!GO:0005764;lysosome;3.98387641450922e-07!GO:0005667;transcription factor complex;4.21547785925331e-07!GO:0045333;cellular respiration;5.05892493135581e-07!GO:0016607;nuclear speck;5.34457935906297e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.34481745932862e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.8765361652526e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.13078911514178e-07!GO:0030120;vesicle coat;6.27606068796345e-07!GO:0030662;coated vesicle membrane;6.27606068796345e-07!GO:0009150;purine ribonucleotide metabolic process;6.6275683329436e-07!GO:0031988;membrane-bound vesicle;6.76684024241248e-07!GO:0015078;hydrogen ion transmembrane transporter activity;7.16032721920909e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.24904911290985e-07!GO:0004812;aminoacyl-tRNA ligase activity;7.24904911290985e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.24904911290985e-07!GO:0048475;coated membrane;7.91050652838423e-07!GO:0030117;membrane coat;7.91050652838423e-07!GO:0009260;ribonucleotide biosynthetic process;8.42703774179102e-07!GO:0046034;ATP metabolic process;8.73907844345958e-07!GO:0016023;cytoplasmic membrane-bound vesicle;9.24946185606746e-07!GO:0009142;nucleoside triphosphate biosynthetic process;9.49649342375271e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.49649342375271e-07!GO:0009141;nucleoside triphosphate metabolic process;1.0061609368169e-06!GO:0042802;identical protein binding;1.19609234984325e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.19688250340908e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.19688250340908e-06!GO:0006099;tricarboxylic acid cycle;1.19866357965908e-06!GO:0046356;acetyl-CoA catabolic process;1.19866357965908e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.2423110955139e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.31009105127322e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.39936387973898e-06!GO:0006333;chromatin assembly or disassembly;1.41759728534962e-06!GO:0006916;anti-apoptosis;1.46879574894137e-06!GO:0046930;pore complex;1.46879574894137e-06!GO:0004298;threonine endopeptidase activity;1.47174098593506e-06!GO:0009109;coenzyme catabolic process;1.53450891751277e-06!GO:0043038;amino acid activation;1.53450891751277e-06!GO:0006418;tRNA aminoacylation for protein translation;1.53450891751277e-06!GO:0043039;tRNA aminoacylation;1.53450891751277e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.55201940830688e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.55201940830688e-06!GO:0006364;rRNA processing;1.65036109761941e-06!GO:0016072;rRNA metabolic process;2.09215679749279e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.15292346041046e-06!GO:0043623;cellular protein complex assembly;2.2220022424949e-06!GO:0000279;M phase;2.2220022424949e-06!GO:0003697;single-stranded DNA binding;2.38386612974065e-06!GO:0045259;proton-transporting ATP synthase complex;2.5563842565226e-06!GO:0065004;protein-DNA complex assembly;2.93724340247539e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.98855229477247e-06!GO:0005770;late endosome;3.33355652499928e-06!GO:0003924;GTPase activity;4.09499410808644e-06!GO:0016564;transcription repressor activity;4.24296239361015e-06!GO:0005762;mitochondrial large ribosomal subunit;4.43741529587387e-06!GO:0000315;organellar large ribosomal subunit;4.43741529587387e-06!GO:0006084;acetyl-CoA metabolic process;4.73072923180947e-06!GO:0051028;mRNA transport;5.28835488491682e-06!GO:0006752;group transfer coenzyme metabolic process;6.40772357004701e-06!GO:0051187;cofactor catabolic process;6.7432519909368e-06!GO:0006613;cotranslational protein targeting to membrane;6.98439349266861e-06!GO:0051170;nuclear import;7.57430453378924e-06!GO:0016310;phosphorylation;7.64076311365638e-06!GO:0031982;vesicle;7.73091658906131e-06!GO:0016779;nucleotidyltransferase activity;8.36032780727171e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.43099690783123e-06!GO:0044440;endosomal part;8.49805649968463e-06!GO:0010008;endosome membrane;8.49805649968463e-06!GO:0005798;Golgi-associated vesicle;8.63596452393686e-06!GO:0006091;generation of precursor metabolites and energy;9.61652629695422e-06!GO:0031324;negative regulation of cellular metabolic process;1.03783203406727e-05!GO:0045454;cell redox homeostasis;1.08375634408949e-05!GO:0009117;nucleotide metabolic process;1.11790341811454e-05!GO:0016568;chromatin modification;1.14241511219656e-05!GO:0000151;ubiquitin ligase complex;1.14881546718728e-05!GO:0007243;protein kinase cascade;1.16245335374878e-05!GO:0045786;negative regulation of progression through cell cycle;1.33007165932562e-05!GO:0031410;cytoplasmic vesicle;1.37722894165e-05!GO:0006606;protein import into nucleus;1.73782104043258e-05!GO:0005788;endoplasmic reticulum lumen;2.1474062073143e-05!GO:0003714;transcription corepressor activity;2.16316967740996e-05!GO:0000245;spliceosome assembly;2.24080809599147e-05!GO:0006612;protein targeting to membrane;2.24090727654396e-05!GO:0048518;positive regulation of biological process;2.30040789401206e-05!GO:0006261;DNA-dependent DNA replication;3.03431513473811e-05!GO:0005525;GTP binding;3.78322533627884e-05!GO:0051427;hormone receptor binding;4.80066704210238e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.92819288092271e-05!GO:0050794;regulation of cellular process;5.02152154745334e-05!GO:0006334;nucleosome assembly;6.06147491156273e-05!GO:0003713;transcription coactivator activity;6.46319789772307e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.79587431202801e-05!GO:0009892;negative regulation of metabolic process;6.79587431202801e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.84079560393089e-05!GO:0015630;microtubule cytoskeleton;6.84079560393089e-05!GO:0051329;interphase of mitotic cell cycle;8.2299759326977e-05!GO:0030867;rough endoplasmic reticulum membrane;8.72136053907468e-05!GO:0003690;double-stranded DNA binding;9.0922387173713e-05!GO:0000314;organellar small ribosomal subunit;9.79911523076642e-05!GO:0005763;mitochondrial small ribosomal subunit;9.79911523076642e-05!GO:0035257;nuclear hormone receptor binding;9.79911523076642e-05!GO:0006950;response to stress;0.000103622202611423!GO:0016563;transcription activator activity;0.000106195238008905!GO:0005813;centrosome;0.000109719592829861!GO:0043021;ribonucleoprotein binding;0.000119947083686673!GO:0003724;RNA helicase activity;0.000139794436996989!GO:0031497;chromatin assembly;0.000169738700206969!GO:0051789;response to protein stimulus;0.000173991947955747!GO:0006986;response to unfolded protein;0.000173991947955747!GO:0008654;phospholipid biosynthetic process;0.000175251747242559!GO:0048471;perinuclear region of cytoplasm;0.000183505670528994!GO:0005657;replication fork;0.000190620990456203!GO:0051325;interphase;0.000195192172331704!GO:0005819;spindle;0.000215696464076744!GO:0050662;coenzyme binding;0.000217833711437652!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000231793716597624!GO:0004576;oligosaccharyl transferase activity;0.000273315469012475!GO:0005815;microtubule organizing center;0.000301518008004458!GO:0008250;oligosaccharyl transferase complex;0.000323682405706548!GO:0032561;guanyl ribonucleotide binding;0.000362179336058692!GO:0019001;guanyl nucleotide binding;0.000362179336058692!GO:0009967;positive regulation of signal transduction;0.000381443865179348!GO:0008234;cysteine-type peptidase activity;0.000382910468316077!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00038389121742787!GO:0043681;protein import into mitochondrion;0.000397640892767857!GO:0031252;leading edge;0.000400017402623189!GO:0048468;cell development;0.000402889244542412!GO:0006839;mitochondrial transport;0.000450483245733501!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000453225914973083!GO:0007264;small GTPase mediated signal transduction;0.000453555955199988!GO:0016481;negative regulation of transcription;0.000456110007642219!GO:0051168;nuclear export;0.000463933330594719!GO:0016044;membrane organization and biogenesis;0.000482542956446632!GO:0008361;regulation of cell size;0.000485368822319034!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000494232928292392!GO:0019867;outer membrane;0.00049787013194595!GO:0045893;positive regulation of transcription, DNA-dependent;0.000515534179446352!GO:0031968;organelle outer membrane;0.000533119267741997!GO:0019899;enzyme binding;0.000606688161019952!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000640186586385541!GO:0043065;positive regulation of apoptosis;0.000640186586385541!GO:0033116;ER-Golgi intermediate compartment membrane;0.000655712431255338!GO:0003729;mRNA binding;0.000719621223623558!GO:0015992;proton transport;0.000730699973810164!GO:0016853;isomerase activity;0.000733895066503604!GO:0006818;hydrogen transport;0.000741993972790312!GO:0001558;regulation of cell growth;0.000741993972790312!GO:0030036;actin cytoskeleton organization and biogenesis;0.000810926377139434!GO:0043068;positive regulation of programmed cell death;0.000826514995357364!GO:0005741;mitochondrial outer membrane;0.000869468776991379!GO:0016049;cell growth;0.000875466877520247!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000922290473777345!GO:0005769;early endosome;0.000927436632109461!GO:0003899;DNA-directed RNA polymerase activity;0.000965493737214229!GO:0006402;mRNA catabolic process;0.00100329490157264!GO:0005885;Arp2/3 protein complex;0.00102471930395099!GO:0006414;translational elongation;0.00110623021068124!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0011149290414436!GO:0000075;cell cycle checkpoint;0.00113774586986181!GO:0018196;peptidyl-asparagine modification;0.00114757715581381!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00114757715581381!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00115773981995516!GO:0008186;RNA-dependent ATPase activity;0.00121066681610655!GO:0048500;signal recognition particle;0.00126587631218204!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00126587631218204!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00126587631218204!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00126587631218204!GO:0051252;regulation of RNA metabolic process;0.00129739998440537!GO:0030118;clathrin coat;0.00130084589792423!GO:0008033;tRNA processing;0.00130110069104901!GO:0006626;protein targeting to mitochondrion;0.00130411563562725!GO:0048037;cofactor binding;0.00131925928794909!GO:0005048;signal sequence binding;0.0013477427568284!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00135570430082679!GO:0015399;primary active transmembrane transporter activity;0.00135570430082679!GO:0008632;apoptotic program;0.00136733469553145!GO:0030663;COPI coated vesicle membrane;0.00136747566625012!GO:0030126;COPI vesicle coat;0.00136747566625012!GO:0045941;positive regulation of transcription;0.00146789995889173!GO:0015980;energy derivation by oxidation of organic compounds;0.00146840982147638!GO:0030133;transport vesicle;0.00160071512808421!GO:0046983;protein dimerization activity;0.00175791479278641!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0017580865452238!GO:0005684;U2-dependent spliceosome;0.00176094129492589!GO:0019752;carboxylic acid metabolic process;0.00180327409346915!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00189913531778601!GO:0030137;COPI-coated vesicle;0.00197080555157266!GO:0031072;heat shock protein binding;0.00200122403590586!GO:0005791;rough endoplasmic reticulum;0.00206310214309522!GO:0043488;regulation of mRNA stability;0.00212951793085729!GO:0043487;regulation of RNA stability;0.00212951793085729!GO:0030176;integral to endoplasmic reticulum membrane;0.00217869771353842!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00218518944306897!GO:0006082;organic acid metabolic process;0.00221210199154032!GO:0030132;clathrin coat of coated pit;0.00221210199154032!GO:0003684;damaged DNA binding;0.00221245253966827!GO:0007006;mitochondrial membrane organization and biogenesis;0.00236192296315581!GO:0065009;regulation of a molecular function;0.00247956238712708!GO:0051920;peroxiredoxin activity;0.00254365004563758!GO:0006302;double-strand break repair;0.0025889059534855!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00269173969920928!GO:0046489;phosphoinositide biosynthetic process;0.00277874100553023!GO:0006891;intra-Golgi vesicle-mediated transport;0.00277931058222881!GO:0022890;inorganic cation transmembrane transporter activity;0.00288842196685333!GO:0008094;DNA-dependent ATPase activity;0.00305814079425773!GO:0016859;cis-trans isomerase activity;0.00311025237632714!GO:0045045;secretory pathway;0.00320684159097394!GO:0004004;ATP-dependent RNA helicase activity;0.00320947102108539!GO:0007010;cytoskeleton organization and biogenesis;0.00321752736973299!GO:0000049;tRNA binding;0.00322399050987799!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00336979776164148!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00354323074923238!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00354323074923238!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00357232308795093!GO:0051052;regulation of DNA metabolic process;0.00359288778840487!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00369255274965742!GO:0045047;protein targeting to ER;0.00369255274965742!GO:0005905;coated pit;0.00380804254430897!GO:0046483;heterocycle metabolic process;0.00384595347824418!GO:0008312;7S RNA binding;0.00384595347824418!GO:0006118;electron transport;0.00387974888687939!GO:0003682;chromatin binding;0.00406535090143893!GO:0050789;regulation of biological process;0.00406535090143893!GO:0005637;nuclear inner membrane;0.00418483120111186!GO:0000775;chromosome, pericentric region;0.00421751266537004!GO:0006520;amino acid metabolic process;0.00428030344736243!GO:0006672;ceramide metabolic process;0.00430687628986502!GO:0031301;integral to organelle membrane;0.00452426808294012!GO:0048487;beta-tubulin binding;0.00454124805622599!GO:0015631;tubulin binding;0.00457951291369322!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00482956501491397!GO:0046467;membrane lipid biosynthetic process;0.00482956501491397!GO:0009165;nucleotide biosynthetic process;0.00488652916799622!GO:0004197;cysteine-type endopeptidase activity;0.00504089834484898!GO:0030119;AP-type membrane coat adaptor complex;0.00505483920864014!GO:0007040;lysosome organization and biogenesis;0.00511248803539842!GO:0000776;kinetochore;0.00512187580749232!GO:0006401;RNA catabolic process;0.00521914347346473!GO:0046474;glycerophospholipid biosynthetic process;0.00572184477612146!GO:0016363;nuclear matrix;0.00596167266577064!GO:0030131;clathrin adaptor complex;0.0060269396389929!GO:0008139;nuclear localization sequence binding;0.00603034519285287!GO:0035258;steroid hormone receptor binding;0.00631887519529758!GO:0030659;cytoplasmic vesicle membrane;0.00639918764333079!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00653932326810368!GO:0007033;vacuole organization and biogenesis;0.00657104230938193!GO:0006767;water-soluble vitamin metabolic process;0.00663857720699019!GO:0030303;stromelysin 2 activity;0.00666624046068131!GO:0007051;spindle organization and biogenesis;0.00669374803176017!GO:0016197;endosome transport;0.00669374803176017!GO:0043492;ATPase activity, coupled to movement of substances;0.00677781627950759!GO:0030029;actin filament-based process;0.00700439366476688!GO:0044262;cellular carbohydrate metabolic process;0.00702862656096382!GO:0032508;DNA duplex unwinding;0.00705951478485388!GO:0032392;DNA geometric change;0.00705951478485388!GO:0005774;vacuolar membrane;0.00706682468084166!GO:0006733;oxidoreduction coenzyme metabolic process;0.00707717692122567!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00725340054304503!GO:0007088;regulation of mitosis;0.00781639403239905!GO:0031902;late endosome membrane;0.00789121120219573!GO:0000786;nucleosome;0.0083538644521146!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00854938724041046!GO:0030658;transport vesicle membrane;0.00860477783168265!GO:0043284;biopolymer biosynthetic process;0.00879270073020588!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00893474029882358!GO:0008092;cytoskeletal protein binding;0.00897072002473487!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00923546721759991!GO:0016791;phosphoric monoester hydrolase activity;0.00933025638445695!GO:0046519;sphingoid metabolic process;0.00990912881810723!GO:0004721;phosphoprotein phosphatase activity;0.0100480229792152!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0102108074484558!GO:0030384;phosphoinositide metabolic process;0.0102266911063875!GO:0031124;mRNA 3'-end processing;0.0105706751058795!GO:0051540;metal cluster binding;0.010778097265946!GO:0051536;iron-sulfur cluster binding;0.010778097265946!GO:0000059;protein import into nucleus, docking;0.0108493665923093!GO:0006979;response to oxidative stress;0.0112890747895772!GO:0044433;cytoplasmic vesicle part;0.0113887042822408!GO:0003702;RNA polymerase II transcription factor activity;0.0114106830519654!GO:0012506;vesicle membrane;0.0115215897093399!GO:0006650;glycerophospholipid metabolic process;0.0115747131037!GO:0051059;NF-kappaB binding;0.0119724835800559!GO:0006417;regulation of translation;0.0119750526872555!GO:0043022;ribosome binding;0.0120090548898401!GO:0009116;nucleoside metabolic process;0.0120653546672583!GO:0000082;G1/S transition of mitotic cell cycle;0.0120690521862509!GO:0040008;regulation of growth;0.0123253279468197!GO:0004674;protein serine/threonine kinase activity;0.0123253279468197!GO:0030027;lamellipodium;0.0127879112886095!GO:0016272;prefoldin complex;0.0129787738593746!GO:0051087;chaperone binding;0.0129787738593746!GO:0045892;negative regulation of transcription, DNA-dependent;0.0130710708632704!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0134893680342941!GO:0003678;DNA helicase activity;0.0135796463112073!GO:0044452;nucleolar part;0.0138153022094299!GO:0009112;nucleobase metabolic process;0.0139108041998287!GO:0016584;nucleosome positioning;0.0139394983549855!GO:0006892;post-Golgi vesicle-mediated transport;0.0140019211763833!GO:0000792;heterochromatin;0.0142075296819915!GO:0007050;cell cycle arrest;0.0144427161635237!GO:0019843;rRNA binding;0.0150710782614431!GO:0004185;serine carboxypeptidase activity;0.0151054534710444!GO:0008283;cell proliferation;0.0152608413243453!GO:0030880;RNA polymerase complex;0.0153194246211527!GO:0006268;DNA unwinding during replication;0.0155687780027578!GO:0008601;protein phosphatase type 2A regulator activity;0.0155961141872196!GO:0016311;dephosphorylation;0.0157100769801382!GO:0006405;RNA export from nucleus;0.0161728724725381!GO:0005765;lysosomal membrane;0.0169506436142711!GO:0008637;apoptotic mitochondrial changes;0.0170277714042948!GO:0008180;signalosome;0.0170710241470754!GO:0006740;NADPH regeneration;0.0171000287962172!GO:0006098;pentose-phosphate shunt;0.0171000287962172!GO:0044437;vacuolar part;0.0177324827403375!GO:0030125;clathrin vesicle coat;0.0179130156510205!GO:0030665;clathrin coated vesicle membrane;0.0179130156510205!GO:0022408;negative regulation of cell-cell adhesion;0.0183450977332367!GO:0030660;Golgi-associated vesicle membrane;0.0183936436544932!GO:0006284;base-excision repair;0.0184939048865644!GO:0006611;protein export from nucleus;0.0186636726843679!GO:0007093;mitotic cell cycle checkpoint;0.0192297081955926!GO:0051101;regulation of DNA binding;0.0194731480722065!GO:0006506;GPI anchor biosynthetic process;0.0195435969806881!GO:0009081;branched chain family amino acid metabolic process;0.0196675831075399!GO:0051098;regulation of binding;0.0199427015890128!GO:0005832;chaperonin-containing T-complex;0.0200406276754834!GO:0008652;amino acid biosynthetic process;0.020269112964311!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0203712332700701!GO:0031529;ruffle organization and biogenesis;0.0204524985003839!GO:0043433;negative regulation of transcription factor activity;0.0209437816034362!GO:0051656;establishment of organelle localization;0.0218383747815945!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0222840536301623!GO:0000428;DNA-directed RNA polymerase complex;0.0222840536301623!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0223040893313361!GO:0001726;ruffle;0.0226290395699666!GO:0032940;secretion by cell;0.0228957277466683!GO:0006505;GPI anchor metabolic process;0.0235021225118889!GO:0000096;sulfur amino acid metabolic process;0.0236694152816005!GO:0043596;nuclear replication fork;0.0242691564997505!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0247685531230594!GO:0046966;thyroid hormone receptor binding;0.0251875168024923!GO:0051128;regulation of cellular component organization and biogenesis;0.0252111162325501!GO:0006497;protein amino acid lipidation;0.0253264813004168!GO:0000086;G2/M transition of mitotic cell cycle;0.0257025587722099!GO:0030134;ER to Golgi transport vesicle;0.0257906433719756!GO:0016251;general RNA polymerase II transcription factor activity;0.0263723688474059!GO:0006519;amino acid and derivative metabolic process;0.026508671094447!GO:0051287;NAD binding;0.026929525387812!GO:0006984;ER-nuclear signaling pathway;0.0270145133863669!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0273591256380225!GO:0030433;ER-associated protein catabolic process;0.0273591256380225!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0273591256380225!GO:0006607;NLS-bearing substrate import into nucleus;0.0273591256380225!GO:0006275;regulation of DNA replication;0.0274356205220109!GO:0003746;translation elongation factor activity;0.0274356205220109!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0275173804491348!GO:0015002;heme-copper terminal oxidase activity;0.0275173804491348!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0275173804491348!GO:0004129;cytochrome-c oxidase activity;0.0275173804491348!GO:0006144;purine base metabolic process;0.0277915654009056!GO:0006643;membrane lipid metabolic process;0.0280503669070324!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0289582642716449!GO:0010257;NADH dehydrogenase complex assembly;0.0289582642716449!GO:0033108;mitochondrial respiratory chain complex assembly;0.0289582642716449!GO:0006383;transcription from RNA polymerase III promoter;0.0289582642716449!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0293596116048701!GO:0009893;positive regulation of metabolic process;0.0294141848283629!GO:0000159;protein phosphatase type 2A complex;0.0295452650614118!GO:0006917;induction of apoptosis;0.0296173768496075!GO:0005869;dynactin complex;0.0297505524037787!GO:0031123;RNA 3'-end processing;0.0297957081989089!GO:0006378;mRNA polyadenylation;0.030013706148171!GO:0051539;4 iron, 4 sulfur cluster binding;0.0302709925943616!GO:0001836;release of cytochrome c from mitochondria;0.0304674721491723!GO:0022415;viral reproductive process;0.0306360566989501!GO:0000209;protein polyubiquitination;0.0308635424100553!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0315090721316986!GO:0004527;exonuclease activity;0.0315090721316986!GO:0017134;fibroblast growth factor binding;0.0319572883775386!GO:0003725;double-stranded RNA binding;0.0319572883775386!GO:0000339;RNA cap binding;0.0320087498823056!GO:0030833;regulation of actin filament polymerization;0.0320607377925952!GO:0006509;membrane protein ectodomain proteolysis;0.0321504358242532!GO:0033619;membrane protein proteolysis;0.0321504358242532!GO:0006739;NADP metabolic process;0.0321576644565486!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0323504437936027!GO:0032984;macromolecular complex disassembly;0.0324914815304865!GO:0050178;phenylpyruvate tautomerase activity;0.0326807168829596!GO:0045792;negative regulation of cell size;0.0332267364260651!GO:0030521;androgen receptor signaling pathway;0.0333006743194875!GO:0031532;actin cytoskeleton reorganization;0.0333006743194875!GO:0006352;transcription initiation;0.0338369208825439!GO:0031625;ubiquitin protein ligase binding;0.0338795776299829!GO:0046822;regulation of nucleocytoplasmic transport;0.0338795776299829!GO:0003711;transcription elongation regulator activity;0.0340315649013705!GO:0008287;protein serine/threonine phosphatase complex;0.0340809338101744!GO:0050811;GABA receptor binding;0.0345588273016222!GO:0030503;regulation of cell redox homeostasis;0.0348343118397542!GO:0012502;induction of programmed cell death;0.0349960893619256!GO:0008538;proteasome activator activity;0.0351115933171381!GO:0051338;regulation of transferase activity;0.0353215887626799!GO:0017166;vinculin binding;0.0353629399316298!GO:0006769;nicotinamide metabolic process;0.0354845692624287!GO:0009889;regulation of biosynthetic process;0.0361024386072237!GO:0008610;lipid biosynthetic process;0.0373955354736157!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0375532133150229!GO:0030308;negative regulation of cell growth;0.0377380972845994!GO:0030145;manganese ion binding;0.0382004365869825!GO:0019783;small conjugating protein-specific protease activity;0.0382102567022429!GO:0030984;kininogen binding;0.0383878590631114!GO:0004213;cathepsin B activity;0.0383878590631114!GO:0031300;intrinsic to organelle membrane;0.0386746478212038!GO:0009100;glycoprotein metabolic process;0.0390463643708891!GO:0030911;TPR domain binding;0.0396957685571741!GO:0031575;G1/S transition checkpoint;0.0400804555762288!GO:0050790;regulation of catalytic activity;0.0403703923340743!GO:0043414;biopolymer methylation;0.0410948574419201!GO:0000118;histone deacetylase complex;0.0411004388933893!GO:0046128;purine ribonucleoside metabolic process;0.0413779056661536!GO:0042278;purine nucleoside metabolic process;0.0413779056661536!GO:0043189;H4/H2A histone acetyltransferase complex;0.0416994995603554!GO:0003923;GPI-anchor transamidase activity;0.0419143745171954!GO:0016255;attachment of GPI anchor to protein;0.0419143745171954!GO:0042765;GPI-anchor transamidase complex;0.0419143745171954!GO:0005876;spindle microtubule;0.0425404224856109!GO:0006301;postreplication repair;0.0426963462400621!GO:0005784;translocon complex;0.0435285082061363!GO:0007265;Ras protein signal transduction;0.0435873467793335!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0440766015215447!GO:0042158;lipoprotein biosynthetic process;0.044099305539465!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0442863520944885!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0445544249254594!GO:0032906;transforming growth factor-beta2 production;0.0447063544593798!GO:0032909;regulation of transforming growth factor-beta2 production;0.0447063544593798!GO:0019362;pyridine nucleotide metabolic process;0.0447955329992263!GO:0030518;steroid hormone receptor signaling pathway;0.0451469371323062!GO:0008017;microtubule binding;0.0453316833312419!GO:0007034;vacuolar transport;0.0454993982465294!GO:0008629;induction of apoptosis by intracellular signals;0.0458071903545381!GO:0043491;protein kinase B signaling cascade;0.0458661006466955!GO:0043624;cellular protein complex disassembly;0.0462677060677264!GO:0031326;regulation of cellular biosynthetic process;0.0471044919929119!GO:0004235;matrilysin activity;0.0475805171092667!GO:0044438;microbody part;0.0478391823714782!GO:0044439;peroxisomal part;0.0478391823714782!GO:0030127;COPII vesicle coat;0.0481211339715155!GO:0012507;ER to Golgi transport vesicle membrane;0.0481211339715155!GO:0031371;ubiquitin conjugating enzyme complex;0.0485100404731251!GO:0043331;response to dsRNA;0.0486757294499567!GO:0043154;negative regulation of caspase activity;0.0487465734619301!GO:0005938;cell cortex;0.0488601995105659!GO:0006310;DNA recombination;0.0489692938667481!GO:0043241;protein complex disassembly;0.0491930156601551!GO:0004843;ubiquitin-specific protease activity;0.0496805108986798!GO:0009225;nucleotide-sugar metabolic process;0.0497819573136024!GO:0000123;histone acetyltransferase complex;0.0498544440437288
|sample_id=10723
|sample_id=10723
|sample_note=
|sample_note=
Line 76: Line 99:
|sample_tissue=pharynx
|sample_tissue=pharynx
|top_motifs=ZEB1:2.08261044137;SNAI1..3:2.07937654978;HSF1,2:1.54754963097;ZNF384:1.40590667373;ZBTB16:1.34683712317;CDC5L:1.29570335105;TP53:1.25628674931;FOXQ1:1.24293129579;TEF:1.22965317387;FOXL1:1.21421926375;MYOD1:1.19460430822;POU2F1..3:1.18481822796;TEAD1:1.15685714521;NKX2-1,4:1.15008217951;TBX4,5:1.12940814848;FOX{I1,J2}:1.11602207406;IRF7:1.06892959407;bHLH_family:1.04245486891;ADNP_IRX_SIX_ZHX:1.03270394696;PAX1,9:1.02168587862;NR6A1:0.875411066704;MTE{core}:0.804382129998;NKX3-1:0.800715664359;HIC1:0.778709527929;TFAP2{A,C}:0.747519481452;HIF1A:0.741606523907;TFDP1:0.723308927776;VSX1,2:0.717479477077;TLX1..3_NFIC{dimer}:0.6902316263;ZNF423:0.681984218218;XCPE1{core}:0.671068596773;IRF1,2:0.670363372032;HMGA1,2:0.642563273901;NKX3-2:0.610787533845;SOX2:0.586004274568;TBP:0.584908147344;TFAP2B:0.564275813185;ARID5B:0.562916230503;MYBL2:0.538952112011;GTF2A1,2:0.519691990349;E2F1..5:0.476448751909;FOXP1:0.466771440049;AIRE:0.454651612259;LMO2:0.446022348712;IKZF2:0.425058109503;FOXN1:0.420721481523;CEBPA,B_DDIT3:0.415224051543;PDX1:0.413258739664;TOPORS:0.409455407072;CDX1,2,4:0.404303286649;FOXA2:0.390611157319;SP1:0.384545646956;EGR1..3:0.340671638392;BREu{core}:0.32480278477;POU1F1:0.312084764615;PITX1..3:0.302828126712;IKZF1:0.281245964893;OCT4_SOX2{dimer}:0.278672309584;GFI1B:0.266945312787;NKX2-3_NKX2-5:0.255038722919;ELK1,4_GABP{A,B1}:0.252012578036;PAX4:0.239035365623;TLX2:0.220424665685;POU3F1..4:0.183197240913;NFIL3:0.181836097909;STAT2,4,6:0.181580826883;FOXD3:0.16361065719;ONECUT1,2:0.163561574773;NFKB1_REL_RELA:0.147988175437;SOX17:0.146219637997;MTF1:0.133200165399;MAZ:0.133100546256;UFEwm:0.0981250445446;FOX{D1,D2}:0.0901584724777;NFY{A,B,C}:0.0815400279188;BPTF:0.072056763848;LHX3,4:0.0633956508003;DBP:0.060789597239;ELF1,2,4:0.0593435336704;PAX2:0.0578445482842;FOS_FOS{B,L1}_JUN{B,D}:0.0486518521489;PAX8:0.00757278666472;ZIC1..3:-0.00327398888626;HOXA9_MEIS1:-0.00904947359718;NKX2-2,8:-0.0121059773828;GFI1:-0.0416259233572;NKX6-1,2:-0.073295212523;MED-1{core}:-0.0773427047959;FOSL2:-0.0774675731904;KLF4:-0.0793905952409;DMAP1_NCOR{1,2}_SMARC:-0.0802350351643;ATF4:-0.115249435163;MEF2{A,B,C,D}:-0.12003393999;ESR1:-0.125667359756;HNF4A_NR2F1,2:-0.134965766678;NANOG:-0.137289481605;NFE2:-0.137623279933;SOX{8,9,10}:-0.139540501179;PBX1:-0.1400245761;EVI1:-0.140614650948;HOX{A6,A7,B6,B7}:-0.146326750064;STAT5{A,B}:-0.152972299004;ZNF238:-0.15867537752;FOXO1,3,4:-0.162329984607;SREBF1,2:-0.163274020627;HNF1A:-0.164793054965;CUX2:-0.16798572075;HLF:-0.180792551765;NR1H4:-0.185623871734;FOXM1:-0.190690902771;GLI1..3:-0.208145921465;ATF5_CREB3:-0.213461968468;PRRX1,2:-0.233762546273;GTF2I:-0.256498053976;MYB:-0.266278340818;PATZ1:-0.267094339413;BACH2:-0.269706390884;LEF1_TCF7_TCF7L1,2:-0.272565995604;FOX{F1,F2,J1}:-0.282960607597;ZNF143:-0.291888726959;POU5F1:-0.295642306649;XBP1:-0.303610337359;MYFfamily:-0.308578448197;REST:-0.31455066612;PAX3,7:-0.31704831406;RXR{A,B,G}:-0.322680786525;TFCP2:-0.323204374243;CREB1:-0.326238519777;ZBTB6:-0.331148571705;RFX2..5_RFXANK_RFXAP:-0.332012890408;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.337373654902;PAX6:-0.338846225353;FOXP3:-0.340919815433;NR5A1,2:-0.344854901091;ZFP161:-0.349468547403;SOX5:-0.36483780118;GCM1,2:-0.374944238564;GZF1:-0.385714481327;PRDM1:-0.390890887465;NFE2L2:-0.392733556273;AHR_ARNT_ARNT2:-0.403647821754;HAND1,2:-0.409548038057;ETS1,2:-0.424358191753;ATF2:-0.426858736815;CRX:-0.437006654648;YY1:-0.439330516029;GATA4:-0.440094029593;MZF1:-0.443413852849;GATA6:-0.448658460053;POU6F1:-0.455056070647;RREB1:-0.472329511151;HOX{A5,B5}:-0.475198739434;EBF1:-0.479615531946;SPIB:-0.480970017363;ALX1:-0.492235865165;T:-0.506321635084;JUN:-0.515779970736;PAX5:-0.523764737022;TFAP4:-0.529475911969;RUNX1..3:-0.564998060572;EP300:-0.568466911491;HOX{A4,D4}:-0.570882483418;NRF1:-0.573620927157;TAL1_TCF{3,4,12}:-0.586272486141;ZNF148:-0.616453514632;SPI1:-0.629873264563;TGIF1:-0.633611269071;PPARG:-0.649781239725;ALX4:-0.655379256677;RFX1:-0.663531820191;SRF:-0.690297074559;AR:-0.698625066632;NHLH1,2:-0.702509170607;NFE2L1:-0.705175152758;EN1,2:-0.737207329779;ATF6:-0.797812192224;NFATC1..3:-0.823164953932;RBPJ:-0.888311391663;ESRRA:-0.896662615937;NANOG{mouse}:-0.953365030626;RORA:-0.986846270254;HES1:-1.0759874971;HBP1_HMGB_SSRP1_UBTF:-1.08179467785;MAFB:-1.09830432219;RXRA_VDR{dimer}:-1.10172482761;SMAD1..7,9:-1.1445310692;HMX1:-1.17520853446;NFIX:-1.19077206722;SPZ1:-1.29540116152;NR3C1:-1.37587640623;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.6247353313;STAT1,3:-1.78622897337
|top_motifs=ZEB1:2.08261044137;SNAI1..3:2.07937654978;HSF1,2:1.54754963097;ZNF384:1.40590667373;ZBTB16:1.34683712317;CDC5L:1.29570335105;TP53:1.25628674931;FOXQ1:1.24293129579;TEF:1.22965317387;FOXL1:1.21421926375;MYOD1:1.19460430822;POU2F1..3:1.18481822796;TEAD1:1.15685714521;NKX2-1,4:1.15008217951;TBX4,5:1.12940814848;FOX{I1,J2}:1.11602207406;IRF7:1.06892959407;bHLH_family:1.04245486891;ADNP_IRX_SIX_ZHX:1.03270394696;PAX1,9:1.02168587862;NR6A1:0.875411066704;MTE{core}:0.804382129998;NKX3-1:0.800715664359;HIC1:0.778709527929;TFAP2{A,C}:0.747519481452;HIF1A:0.741606523907;TFDP1:0.723308927776;VSX1,2:0.717479477077;TLX1..3_NFIC{dimer}:0.6902316263;ZNF423:0.681984218218;XCPE1{core}:0.671068596773;IRF1,2:0.670363372032;HMGA1,2:0.642563273901;NKX3-2:0.610787533845;SOX2:0.586004274568;TBP:0.584908147344;TFAP2B:0.564275813185;ARID5B:0.562916230503;MYBL2:0.538952112011;GTF2A1,2:0.519691990349;E2F1..5:0.476448751909;FOXP1:0.466771440049;AIRE:0.454651612259;LMO2:0.446022348712;IKZF2:0.425058109503;FOXN1:0.420721481523;CEBPA,B_DDIT3:0.415224051543;PDX1:0.413258739664;TOPORS:0.409455407072;CDX1,2,4:0.404303286649;FOXA2:0.390611157319;SP1:0.384545646956;EGR1..3:0.340671638392;BREu{core}:0.32480278477;POU1F1:0.312084764615;PITX1..3:0.302828126712;IKZF1:0.281245964893;OCT4_SOX2{dimer}:0.278672309584;GFI1B:0.266945312787;NKX2-3_NKX2-5:0.255038722919;ELK1,4_GABP{A,B1}:0.252012578036;PAX4:0.239035365623;TLX2:0.220424665685;POU3F1..4:0.183197240913;NFIL3:0.181836097909;STAT2,4,6:0.181580826883;FOXD3:0.16361065719;ONECUT1,2:0.163561574773;NFKB1_REL_RELA:0.147988175437;SOX17:0.146219637997;MTF1:0.133200165399;MAZ:0.133100546256;UFEwm:0.0981250445446;FOX{D1,D2}:0.0901584724777;NFY{A,B,C}:0.0815400279188;BPTF:0.072056763848;LHX3,4:0.0633956508003;DBP:0.060789597239;ELF1,2,4:0.0593435336704;PAX2:0.0578445482842;FOS_FOS{B,L1}_JUN{B,D}:0.0486518521489;PAX8:0.00757278666472;ZIC1..3:-0.00327398888626;HOXA9_MEIS1:-0.00904947359718;NKX2-2,8:-0.0121059773828;GFI1:-0.0416259233572;NKX6-1,2:-0.073295212523;MED-1{core}:-0.0773427047959;FOSL2:-0.0774675731904;KLF4:-0.0793905952409;DMAP1_NCOR{1,2}_SMARC:-0.0802350351643;ATF4:-0.115249435163;MEF2{A,B,C,D}:-0.12003393999;ESR1:-0.125667359756;HNF4A_NR2F1,2:-0.134965766678;NANOG:-0.137289481605;NFE2:-0.137623279933;SOX{8,9,10}:-0.139540501179;PBX1:-0.1400245761;EVI1:-0.140614650948;HOX{A6,A7,B6,B7}:-0.146326750064;STAT5{A,B}:-0.152972299004;ZNF238:-0.15867537752;FOXO1,3,4:-0.162329984607;SREBF1,2:-0.163274020627;HNF1A:-0.164793054965;CUX2:-0.16798572075;HLF:-0.180792551765;NR1H4:-0.185623871734;FOXM1:-0.190690902771;GLI1..3:-0.208145921465;ATF5_CREB3:-0.213461968468;PRRX1,2:-0.233762546273;GTF2I:-0.256498053976;MYB:-0.266278340818;PATZ1:-0.267094339413;BACH2:-0.269706390884;LEF1_TCF7_TCF7L1,2:-0.272565995604;FOX{F1,F2,J1}:-0.282960607597;ZNF143:-0.291888726959;POU5F1:-0.295642306649;XBP1:-0.303610337359;MYFfamily:-0.308578448197;REST:-0.31455066612;PAX3,7:-0.31704831406;RXR{A,B,G}:-0.322680786525;TFCP2:-0.323204374243;CREB1:-0.326238519777;ZBTB6:-0.331148571705;RFX2..5_RFXANK_RFXAP:-0.332012890408;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.337373654902;PAX6:-0.338846225353;FOXP3:-0.340919815433;NR5A1,2:-0.344854901091;ZFP161:-0.349468547403;SOX5:-0.36483780118;GCM1,2:-0.374944238564;GZF1:-0.385714481327;PRDM1:-0.390890887465;NFE2L2:-0.392733556273;AHR_ARNT_ARNT2:-0.403647821754;HAND1,2:-0.409548038057;ETS1,2:-0.424358191753;ATF2:-0.426858736815;CRX:-0.437006654648;YY1:-0.439330516029;GATA4:-0.440094029593;MZF1:-0.443413852849;GATA6:-0.448658460053;POU6F1:-0.455056070647;RREB1:-0.472329511151;HOX{A5,B5}:-0.475198739434;EBF1:-0.479615531946;SPIB:-0.480970017363;ALX1:-0.492235865165;T:-0.506321635084;JUN:-0.515779970736;PAX5:-0.523764737022;TFAP4:-0.529475911969;RUNX1..3:-0.564998060572;EP300:-0.568466911491;HOX{A4,D4}:-0.570882483418;NRF1:-0.573620927157;TAL1_TCF{3,4,12}:-0.586272486141;ZNF148:-0.616453514632;SPI1:-0.629873264563;TGIF1:-0.633611269071;PPARG:-0.649781239725;ALX4:-0.655379256677;RFX1:-0.663531820191;SRF:-0.690297074559;AR:-0.698625066632;NHLH1,2:-0.702509170607;NFE2L1:-0.705175152758;EN1,2:-0.737207329779;ATF6:-0.797812192224;NFATC1..3:-0.823164953932;RBPJ:-0.888311391663;ESRRA:-0.896662615937;NANOG{mouse}:-0.953365030626;RORA:-0.986846270254;HES1:-1.0759874971;HBP1_HMGB_SSRP1_UBTF:-1.08179467785;MAFB:-1.09830432219;RXRA_VDR{dimer}:-1.10172482761;SMAD1..7,9:-1.1445310692;HMX1:-1.17520853446;NFIX:-1.19077206722;SPZ1:-1.29540116152;NR3C1:-1.37587640623;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.6247353313;STAT1,3:-1.78622897337
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10723-110A3;search_select_hide=table117:FF:10723-110A3
}}
}}

Latest revision as of 15:02, 3 June 2020

Name:pharyngeal carcinoma cell line:Detroit 562
Species:Human (Homo sapiens)
Library ID:CNhs11849
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuepharynx
dev stageNA
sexfemale
ageNA
cell typeunclassifiable
cell lineDetroit 562
companyATCC
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005900
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11849 CAGE DRX007984 DRR008856
Accession ID Hg19

Library idBAMCTSS
CNhs11849 DRZ000281 DRZ001666
Accession ID Hg38

Library idBAMCTSS
CNhs11849 DRZ011631 DRZ013016
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.332
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.168
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.0918
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.108
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.221
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.125
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0.0522
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.095
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.247
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.661
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0519
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0.0988
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.0522
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0533
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.195
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.277
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11849

Jaspar motifP-value
MA0002.24.30045e-4
MA0003.10.603
MA0004.10.832
MA0006.10.0592
MA0007.10.414
MA0009.10.548
MA0014.10.11
MA0017.10.174
MA0018.20.0155
MA0019.10.535
MA0024.10.127
MA0025.10.66
MA0027.10.761
MA0028.10.89
MA0029.10.967
MA0030.10.137
MA0031.10.497
MA0035.20.579
MA0038.10.497
MA0039.20.159
MA0040.10.187
MA0041.10.878
MA0042.10.367
MA0043.10.522
MA0046.10.748
MA0047.20.111
MA0048.10.58
MA0050.13.09005e-6
MA0051.13.49539e-4
MA0052.10.107
MA0055.10.418
MA0057.10.6
MA0058.10.328
MA0059.10.0484
MA0060.10.624
MA0061.10.29
MA0062.20.0534
MA0065.20.224
MA0066.10.171
MA0067.10.212
MA0068.10.465
MA0069.10.244
MA0070.10.249
MA0071.10.004
MA0072.10.0204
MA0073.10.491
MA0074.10.926
MA0076.10.267
MA0077.10.0375
MA0078.10.717
MA0079.20.173
MA0080.21.67573e-4
MA0081.10.0139
MA0083.10.368
MA0084.10.8
MA0087.10.73
MA0088.10.0211
MA0090.11.87032e-4
MA0091.10.00107
MA0092.10.936
MA0093.10.689
MA0099.22.77815e-4
MA0100.10.377
MA0101.10.875
MA0102.20.188
MA0103.11.3889e-6
MA0104.20.0947
MA0105.14.14428e-4
MA0106.10.0316
MA0107.10.89
MA0108.20.0289
MA0111.10.694
MA0112.20.129
MA0113.10.101
MA0114.10.171
MA0115.10.576
MA0116.10.00483
MA0117.10.0128
MA0119.10.39
MA0122.10.795
MA0124.10.0855
MA0125.10.273
MA0131.10.638
MA0135.10.208
MA0136.10.00176
MA0137.20.22
MA0138.20.12
MA0139.10.775
MA0140.10.788
MA0141.10.0476
MA0142.10.0168
MA0143.10.158
MA0144.10.9
MA0145.10.969
MA0146.10.185
MA0147.10.0482
MA0148.10.0197
MA0149.10.311
MA0150.10.17
MA0152.10.233
MA0153.10.722
MA0154.10.00822
MA0155.10.606
MA0156.10.0312
MA0157.10.661
MA0159.10.0967
MA0160.10.0978
MA0162.10.808
MA0163.11.85987e-4
MA0164.10.397
MA0258.10.137
MA0259.10.495



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11849

Novel motifP-value
10.164
100.422
1000.352
1010.884
1020.525
1030.565
1040.409
1050.826
1060.056
1070.00817
1080.686
1090.521
110.0931
1100.576
1110.778
1120.201
1130.654
1140.0415
1150.178
1160.462
1170.204
1180.157
1190.915
120.0579
1200.908
1210.208
1220.853
1230.804
1240.163
1250.883
1260.834
1270.696
1280.768
1290.754
130.55
1300.755
1310.663
1320.195
1330.426
1340.258
1350.586
1360.0122
1370.103
1380.961
1390.0949
140.98
1400.776
1410.249
1420.792
1438.87995e-4
1440.132
1450.632
1460.646
1470.0692
1480.665
1490.225
150.21
1500.27
1510.869
1520.00926
1530.583
1540.491
1550.694
1560.974
1570.813
1580.225
1590.977
160.772
1600.457
1610.37
1620.326
1630.928
1640.96
1650.665
1660.542
1670.933
1680.693
1690.345
170.82
180.164
190.0828
20.966
200.647
210.881
220.151
230.841
240.738
250.275
260.449
270.766
280.92
290.814
30.334
300.211
310.365
320.0315
330.289
340.353
350.0458
360.132
370.379
380.996
390.25
40.132
400.488
410.0236
420.63
430.0451
440.912
450.777
460.181
470.218
480.775
490.00728
50.68
500.696
510.49
520.253
530.471
540.637
550.233
560.746
570.915
580.625
590.237
60.912
600.165
610.569
620.156
630.883
640.701
650.725
660.685
670.233
680.0725
690.421
70.977
700.754
710.57
720.199
730.271
740.00744
750.713
760.802
770.863
780.726
790.465
80.237
800.0398
810.0618
820.00156
830.384
840.391
850.456
860.499
870.0606
880.424
890.901
90.144
900.417
910.165
920.56
930.797
940.145
950.672
960.0444
970.589
980.184
990.919



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11849


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002251 (epithelial cell of alimentary canal)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
7 (disease of anatomical entity)
305 (carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0006562 (pharynx)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100819 (pharyngeal cell line sample)
0100790 (pharyngeal cancer cell line sample)
0100834 (Detroit 562 cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000223 (endodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)

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