FF:11307-117C2: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005210 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00013692 | ||
|accession_numbers=CAGE;DRX008196;DRR009068;DRZ000493;DRZ001878;DRZ011843;DRZ013228 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX012364;DRR013812;DRZ003013 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr1:25256756..25256774,-!p1@RUNX3!2.51!583.55!RUNX3;;chr2:192015701..192015743,-!p1@STAT4!2.16!193.63!STAT4;;chr2:157189180..157189290,-!p1@NR4A2!2.12!638.65!NR4A2;;chr19:45971246..45971265,+!p1@FOSB!2.10!2160.38!FOSB;;chr17:45810594..45810608,+!p1@TBX21!2.07!117.14!TBX21;;chr20:50159198..50159299,-!p1@NFATC2!2.01!143.88!NFATC2;;chr1:26697243..26697258,-!p1@ZNF683!1.99!97.35!ZNF683;;chr9:102584262..102584276,+!p1@NR4A3!1.98!204.32!NR4A3;;chr10:8096631..8096660,+!p1@GATA3!1.97!111.26!GATA3;;chr9:117150254..117150271,-!p1@AKNA!1.93!220.37!AKNA;;chr19:54058073..54058088,+!p1@ZNF331!1.88!75.15!ZNF331;;chr10:8096772..8096787,+!p2@GATA3!1.87!85.31!GATA3;;chr14:75745523..75745537,+!p1@FOS!1.85!7735.44!FOS;;chr14:75746722..75746777,+!p2@FOS!1.82!81.84!FOS;;chr19:54041669..54041697,+!p2@ZNF331!1.82!65.79!ZNF331;;chr15:60884706..60884743,-!p1@RORA!1.80!301.94!RORA;;chr7:50343634..50343717,+!p2@IKZF1!1.78!59.10!IKZF1;;chr2:231090433..231090469,+!p1@SP140!1.71!50.81!SP140;;chrX:106960285..106960299,-!p1@TSC22D3!1.68!1170.59!TSC22D3;;chr17:38020392..38020477,-!p1@IKZF3!1.68!47.07!IKZF3;;chr5:133450365..133450444,+!p1@TCF7!1.65!188.81!TCF7;;chr20:56195474..56195506,-!p1@ZBP1!1.65!43.86!ZBP1;;chr3:39195075..39195088,-!p1@CSRNP1!1.64!257.54!CSRNP1;;chr2:145271342..145271377,-!p5@ZEB2!1.64!43.06!ZEB2;;chr2:192015677..192015691,-!p3@STAT4!1.64!42.52!STAT4;;chr18:46475696..46475713,-!p1@SMAD7!1.63!46.53!SMAD7;;chr6:106546808..106546833,+!p3@PRDM1!1.62!50.81!PRDM1;;chr1:26697189..26697205,-!p2@ZNF683!1.62!40.92!ZNF683;;chr9:3525727..3525828,-!p2@RFX3!1.61!97.62!RFX3;;chr9:102584241..102584261,+!p4@NR4A3!1.61!61.24!NR4A3;;chr12:72056800..72056834,+!p1@THAP2!1.60!51.35!THAP2;;chr3:27763807..27763822,-!p1@EOMES!1.60!38.78!EOMES;;chr10:35484053..35484076,+!p1@CREM!1.59!92.00!CREM;;chr8:123793988..123794016,+!p1@ZHX2!1.58!64.19!ZHX2;;chrY:21906594..21906622,-!p1@KDM5D!1.58!36.91!KDM5D;;chr19:19729477..19729542,-!p1@PBX4!1.57!74.62!PBX4;;chr19:16435625..16435682,+!p1@KLF2!1.55!1048.90!KLF2;;chr1:59249688..59249703,-!p3@JUN!1.55!197.64!JUN;;chr3:63953435..63953499,+!p1@ATXN7!1.55!34.23!ATXN7;;chr2:61108878..61108891,+!p5@REL!1.54!33.43!REL;;chr10:3824332..3824425,-!p4@KLF6!1.52!50.55!KLF6;;chr14:64971288..64971316,-!p2@ZBTB25!1.51!94.94!ZBTB25;;chr9:102584128..102584144,+!p3@NR4A3!1.50!57.77!NR4A3;;chr1:25291475..25291511,-!p2@RUNX3!1.49!30.22!RUNX3;;chr3:5020939..5020952,+!p2@BHLHE40!1.46!84.24!BHLHE40;;chrX:106960221..106960236,-!p3@TSC22D3!1.46!74.62!TSC22D3;;chr2:192015750..192015793,-!p2@STAT4!1.45!36.64!STAT4;;chr2:43453734..43453751,-!p1@ZFP36L2!1.44!2696.60!ZFP36L2;;chr1:59249707..59249727,-!p1@JUN!1.43!1047.30!JUN;;chr3:23986824..23986848,+!p2@NR1D2!1.43!139.07!NR1D2;;chr7:104654690..104654704,+!p2@MLL5!1.43!51.08!MLL5;;chr4:103422499..103422632,+!p1@NFKB1!1.42!503.86!NFKB1;;chr6:91006518..91006570,-!p1@BACH2!1.42!57.50!BACH2;;chr7:104654718..104654741,+!p3@MLL5!1.42!36.64!MLL5;;chr4:57522166..57522260,-!p2@HOPX!1.42!28.88!HOPX;;chr2:231090471..231090504,+!p2@SP140!1.42!25.41!SP140;;chr4:57522674..57522699,-!p5@HOPX!1.42!25.14!HOPX;;chr14:35873947..35873965,-!p1@NFKBIA!1.41!1497.67!NFKBIA;;chrX:106960180..106960197,-!p2@TSC22D3!1.41!91.20!TSC22D3;;chr8:67525443..67525459,-!p2@MYBL1!1.40!35.57!MYBL1;;chr9:102584278..102584285,+!p5@NR4A3!1.40!24.34!NR4A3;;chr5:133451294..133451310,+!p2@TCF7!1.39!23.53!TCF7;;chr2:61108695..61108753,+!p1@REL!1.38!152.44!REL;;chr17:37934365..37934387,-!p2@IKZF3!1.38!23.00!IKZF3;;chr19:54041645..54041661,+!p5@ZNF331!1.38!23.00!ZNF331;;chr12:51158359..51158395,+!p4@ATF1!1.38!22.73!ATF1;;chr5:131826457..131826514,-!p1@IRF1!1.37!839.49!IRF1;;chr14:35872453..35872485,-!p2@NFKBIA!1.37!54.02!NFKBIA;;chr13:74707894..74707947,-!p6@KLF12!1.37!25.14!KLF12;;chr7:50343895..50343936,+!p5@IKZF1!1.37!22.46!IKZF1;;chr6:391743..391759,+!p1@IRF4!1.37!22.20!IRF4;;chr17:38497662..38497713,+!p4@RARA!1.35!24.60!RARA;;chr2:61108808..61108821,+!p3@REL!1.34!26.48!REL;;chr2:97202480..97202499,+!p1@ARID5A!1.31!189.88!ARID5A;;chr2:208394817..208394834,+!p3@CREB1!1.31!76.49!CREB1;;chr20:44600199..44600219,-!p3@ZNF335!1.28!24.07!ZNF335;;chr8:81397820..81397836,+!p2@ZBTB10!1.28!22.46!ZBTB10;;chr1:37940170..37940190,+!p1@ZC3H12A!1.27!210.74!ZC3H12A;;chr12:72056773..72056796,+!p3@THAP2!1.27!23.00!THAP2;;chr6:106546834..106546850,+!p4@PRDM1!1.26!17.38!PRDM1;;chr19:12902289..12902307,+!p1@JUNB!1.25!3755.13!JUNB;;chr11:67007548..67007610,+!p3@KDM2A!1.25!121.69!KDM2A;;chr10:35416142..35416169,+!p3@CREM!1.25!44.40!CREM;;chr3:39195037..39195069,-!p2@CSRNP1!1.24!101.09!CSRNP1;;chr8:81397846..81397860,+!p3@ZBTB10!1.24!20.59!ZBTB10;;chr1:25256175..25256228,-!p5@RUNX3!1.24!16.31!RUNX3;;chr1:10754477..10754517,-!p1@CASZ1!1.23!26.48!CASZ1;;chr16:89789271..89789291,+!p5@ZNF276!1.23!16.05!ZNF276;;chr4:38665769..38665801,+!p2@KLF3!1.22!139.60!KLF3;;chr3:39195139..39195150,-!p3@CSRNP1!1.22!19.79!CSRNP1;;chr2:157186630..157186686,-!p6@NR4A2!1.22!15.51!NR4A2;;chr14:35874077..35874091,-!p8@NFKBIA!1.22!15.51!NFKBIA;;chr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| |expression_enrichment_score=chr1:25256756..25256774,-!p1@RUNX3!2.51!583.55!RUNX3;;chr2:192015701..192015743,-!p1@STAT4!2.16!193.63!STAT4;;chr2:157189180..157189290,-!p1@NR4A2!2.12!638.65!NR4A2;;chr19:45971246..45971265,+!p1@FOSB!2.10!2160.38!FOSB;;chr17:45810594..45810608,+!p1@TBX21!2.07!117.14!TBX21;;chr20:50159198..50159299,-!p1@NFATC2!2.01!143.88!NFATC2;;chr1:26697243..26697258,-!p1@ZNF683!1.99!97.35!ZNF683;;chr9:102584262..102584276,+!p1@NR4A3!1.98!204.32!NR4A3;;chr10:8096631..8096660,+!p1@GATA3!1.97!111.26!GATA3;;chr9:117150254..117150271,-!p1@AKNA!1.93!220.37!AKNA;;chr19:54058073..54058088,+!p1@ZNF331!1.88!75.15!ZNF331;;chr10:8096772..8096787,+!p2@GATA3!1.87!85.31!GATA3;;chr14:75745523..75745537,+!p1@FOS!1.85!7735.44!FOS;;chr14:75746722..75746777,+!p2@FOS!1.82!81.84!FOS;;chr19:54041669..54041697,+!p2@ZNF331!1.82!65.79!ZNF331;;chr15:60884706..60884743,-!p1@RORA!1.80!301.94!RORA;;chr7:50343634..50343717,+!p2@IKZF1!1.78!59.10!IKZF1;;chr2:231090433..231090469,+!p1@SP140!1.71!50.81!SP140;;chrX:106960285..106960299,-!p1@TSC22D3!1.68!1170.59!TSC22D3;;chr17:38020392..38020477,-!p1@IKZF3!1.68!47.07!IKZF3;;chr5:133450365..133450444,+!p1@TCF7!1.65!188.81!TCF7;;chr20:56195474..56195506,-!p1@ZBP1!1.65!43.86!ZBP1;;chr3:39195075..39195088,-!p1@CSRNP1!1.64!257.54!CSRNP1;;chr2:145271342..145271377,-!p5@ZEB2!1.64!43.06!ZEB2;;chr2:192015677..192015691,-!p3@STAT4!1.64!42.52!STAT4;;chr18:46475696..46475713,-!p1@SMAD7!1.63!46.53!SMAD7;;chr6:106546808..106546833,+!p3@PRDM1!1.62!50.81!PRDM1;;chr1:26697189..26697205,-!p2@ZNF683!1.62!40.92!ZNF683;;chr9:3525727..3525828,-!p2@RFX3!1.61!97.62!RFX3;;chr9:102584241..102584261,+!p4@NR4A3!1.61!61.24!NR4A3;;chr12:72056800..72056834,+!p1@THAP2!1.60!51.35!THAP2;;chr3:27763807..27763822,-!p1@EOMES!1.60!38.78!EOMES;;chr10:35484053..35484076,+!p1@CREM!1.59!92.00!CREM;;chr8:123793988..123794016,+!p1@ZHX2!1.58!64.19!ZHX2;;chrY:21906594..21906622,-!p1@KDM5D!1.58!36.91!KDM5D;;chr19:19729477..19729542,-!p1@PBX4!1.57!74.62!PBX4;;chr19:16435625..16435682,+!p1@KLF2!1.55!1048.90!KLF2;;chr1:59249688..59249703,-!p3@JUN!1.55!197.64!JUN;;chr3:63953435..63953499,+!p1@ATXN7!1.55!34.23!ATXN7;;chr2:61108878..61108891,+!p5@REL!1.54!33.43!REL;;chr10:3824332..3824425,-!p4@KLF6!1.52!50.55!KLF6;;chr14:64971288..64971316,-!p2@ZBTB25!1.51!94.94!ZBTB25;;chr9:102584128..102584144,+!p3@NR4A3!1.50!57.77!NR4A3;;chr1:25291475..25291511,-!p2@RUNX3!1.49!30.22!RUNX3;;chr3:5020939..5020952,+!p2@BHLHE40!1.46!84.24!BHLHE40;;chrX:106960221..106960236,-!p3@TSC22D3!1.46!74.62!TSC22D3;;chr2:192015750..192015793,-!p2@STAT4!1.45!36.64!STAT4;;chr2:43453734..43453751,-!p1@ZFP36L2!1.44!2696.60!ZFP36L2;;chr1:59249707..59249727,-!p1@JUN!1.43!1047.30!JUN;;chr3:23986824..23986848,+!p2@NR1D2!1.43!139.07!NR1D2;;chr7:104654690..104654704,+!p2@MLL5!1.43!51.08!MLL5;;chr4:103422499..103422632,+!p1@NFKB1!1.42!503.86!NFKB1;;chr6:91006518..91006570,-!p1@BACH2!1.42!57.50!BACH2;;chr7:104654718..104654741,+!p3@MLL5!1.42!36.64!MLL5;;chr4:57522166..57522260,-!p2@HOPX!1.42!28.88!HOPX;;chr2:231090471..231090504,+!p2@SP140!1.42!25.41!SP140;;chr4:57522674..57522699,-!p5@HOPX!1.42!25.14!HOPX;;chr14:35873947..35873965,-!p1@NFKBIA!1.41!1497.67!NFKBIA;;chrX:106960180..106960197,-!p2@TSC22D3!1.41!91.20!TSC22D3;;chr8:67525443..67525459,-!p2@MYBL1!1.40!35.57!MYBL1;;chr9:102584278..102584285,+!p5@NR4A3!1.40!24.34!NR4A3;;chr5:133451294..133451310,+!p2@TCF7!1.39!23.53!TCF7;;chr2:61108695..61108753,+!p1@REL!1.38!152.44!REL;;chr17:37934365..37934387,-!p2@IKZF3!1.38!23.00!IKZF3;;chr19:54041645..54041661,+!p5@ZNF331!1.38!23.00!ZNF331;;chr12:51158359..51158395,+!p4@ATF1!1.38!22.73!ATF1;;chr5:131826457..131826514,-!p1@IRF1!1.37!839.49!IRF1;;chr14:35872453..35872485,-!p2@NFKBIA!1.37!54.02!NFKBIA;;chr13:74707894..74707947,-!p6@KLF12!1.37!25.14!KLF12;;chr7:50343895..50343936,+!p5@IKZF1!1.37!22.46!IKZF1;;chr6:391743..391759,+!p1@IRF4!1.37!22.20!IRF4;;chr17:38497662..38497713,+!p4@RARA!1.35!24.60!RARA;;chr2:61108808..61108821,+!p3@REL!1.34!26.48!REL;;chr2:97202480..97202499,+!p1@ARID5A!1.31!189.88!ARID5A;;chr2:208394817..208394834,+!p3@CREB1!1.31!76.49!CREB1;;chr20:44600199..44600219,-!p3@ZNF335!1.28!24.07!ZNF335;;chr8:81397820..81397836,+!p2@ZBTB10!1.28!22.46!ZBTB10;;chr1:37940170..37940190,+!p1@ZC3H12A!1.27!210.74!ZC3H12A;;chr12:72056773..72056796,+!p3@THAP2!1.27!23.00!THAP2;;chr6:106546834..106546850,+!p4@PRDM1!1.26!17.38!PRDM1;;chr19:12902289..12902307,+!p1@JUNB!1.25!3755.13!JUNB;;chr11:67007548..67007610,+!p3@KDM2A!1.25!121.69!KDM2A;;chr10:35416142..35416169,+!p3@CREM!1.25!44.40!CREM;;chr3:39195037..39195069,-!p2@CSRNP1!1.24!101.09!CSRNP1;;chr8:81397846..81397860,+!p3@ZBTB10!1.24!20.59!ZBTB10;;chr1:25256175..25256228,-!p5@RUNX3!1.24!16.31!RUNX3;;chr1:10754477..10754517,-!p1@CASZ1!1.23!26.48!CASZ1;;chr16:89789271..89789291,+!p5@ZNF276!1.23!16.05!ZNF276;;chr4:38665769..38665801,+!p2@KLF3!1.22!139.60!KLF3;;chr3:39195139..39195150,-!p3@CSRNP1!1.22!19.79!CSRNP1;;chr2:157186630..157186686,-!p6@NR4A2!1.22!15.51!NR4A2;;chr14:35874077..35874091,-!p8@NFKBIA!1.22!15.51!NFKBIA;;chr3:18486354..18486377,-!p2@SATB1!1.21!18.99!SATB1;;chr21:36421347..36421380,-!p8@RUNX1!1.21!15.24!RUNX1;;chr9:102584159..102584174,+!p2@NR4A3!1.20!26.48!NR4A3;;chr8:81397876..81397898,+!p5@ZBTB10!1.20!17.38!ZBTB10;;chr17:38020557..38020572,-!p4@IKZF3!1.20!14.98!IKZF3;;chr2:97202991..97203043,+!p3@ARID5A!1.20!14.98!ARID5A;;chr4:57522598..57522664,-!p3@HOPX!1.20!14.71!HOPX;;chr7:17338324..17338341,+!p3@AHR!1.19!47.87!AHR;;chr10:3827389..3827408,-!p1@KLF6!1.18!1054.52!KLF6;;chr2:145277640..145277771,-!p1@ZEB2!1.18!184.80!ZEB2;;chr1:59249645..59249656,-!p4@JUN!1.18!35.84!JUN;;chr4:149365827..149365870,-!p5@NR3C2!1.18!14.17!NR3C2;;chr14:99738138..99738163,-!p1@BCL11B!1.18!14.17!BCL11B;;chr10:35484090..35484104,+!p6@CREM!1.17!13.91!CREM;;chr18:46477458..46477479,-!p4@SMAD7!1.17!13.64!SMAD7;;chrX:106960249..106960260,-!p5@TSC22D3!1.16!21.13!TSC22D3;;chr7:106809470..106809481,+!p2@HBP1!1.16!18.99!HBP1;;chr3:71542684..71542720,-!p18@FOXP1!1.16!13.37!FOXP1;;chr13:74708029..74708077,-!p2@KLF12!1.15!37.71!KLF12;;chr14:75746781..75746799,+!p6@FOS!1.15!13.10!FOS;;chr8:123793252..123793266,+!p10@ZHX2!1.15!13.10!ZHX2;;chr14:64971461..64971542,+!p1@ZBTB1!1.14!257.01!ZBTB1;;chr10:104154246..104154347,+!p3@NFKB2!1.14!77.29!NFKB2;;chr12:72056749..72056767,+!p6@THAP2!1.14!14.17!THAP2;;chr1:91487774..91487802,-!p2@ZNF644!1.12!32.63!ZNF644;;chr4:103498623..103498650,+!p9@NFKB1!1.12!12.30!NFKB1;;chr10:8097321..8097348,+!p4@GATA3!1.12!12.30!GATA3;;chr14:75747250..75747267,+!p5@FOS!1.12!12.30!FOS;;chr15:31619140..31619152,+!p11@KLF13!1.12!12.30!KLF13;;chr7:50344251..50344288,+!p3@IKZF1!1.12!12.03!IKZF1;;chr15:60884747..60884774,-!p3@RORA!1.11!29.15!RORA;;chr3:150126904..150126958,+!p7@TSC22D2!1.11!20.86!TSC22D2;;chr11:85375237..85375277,-!p4@CREBZF!1.11!13.64!CREBZF;;chr20:56195525..56195556,-!p2@ZBP1!1.11!11.77!ZBP1;;chr2:157189617..157189667,-!p4@NR4A2!1.11!11.77!NR4A2;;chr8:41909982..41910009,-!p2@KAT6A!1.10!13.10!KAT6A;;chr15:31619326..31619390,+!p2@KLF13!1.09!129.44!KLF13;;chr19:12721790..12721810,+!p2@ZNF791!1.09!31.56!ZNF791;;chr8:60031619..60031676,-!p1@TOX!1.09!24.34!TOX;;chr5:142782823..142782854,-!p3@NR3C1!1.09!16.31!NR3C1;;chr19:54041603..54041615,+!p10@ZNF331!1.09!11.23!ZNF331;;chr11:13299319..13299424,+!p1@ARNTL!1.08!111.52!ARNTL;;chr14:35872962..35873025,-!p3@NFKBIA!1.08!28.08!NFKBIA;;chr1:45805693..45805718,+!p3@TOE1!1.08!24.07!TOE1;;chr14:35872926..35872951,-!p4@NFKBIA!1.08!15.51!NFKBIA;;chr7:127032330..127032356,-!p3@ZNF800!1.08!14.17!ZNF800;;chr8:102218439..102218455,-!p3@ZNF706!1.08!10.97!ZNF706;;chr8:103668114..103668134,-!p5@KLF10!1.08!10.97!KLF10;;chr14:75747296..75747329,+!p4@FOS!1.08!10.97!FOS;;chr19:45504688..45504782,+!p1@RELB!1.07!65.52!RELB;;chr8:67525473..67525518,-!p1@MYBL1!1.07!24.87!MYBL1;;chr15:57211634..57211657,+!p5@TCF12!1.07!16.58!TCF12;;chr14:75988831..75988847,+!p2@BATF!1.07!10.70!BATF;;chr17:45810816..45810838,+!p2@TBX21!1.07!10.70!TBX21;;chr2:68592394..68592405,+!p2@PLEK!1.07!10.70!PLEK;;chr19:54041574..54041589,+!p6@ZNF331!1.07!10.70!ZNF331;;chr1:92951607..92951661,-!p1@GFI1!1.07!10.70!GFI1;;chr19:45972701..45972774,+!p2@FOSB!1.06!14.44!FOSB;;chr10:3827371..3827386,-!p2@KLF6!1.05!86.65!KLF6;;chr13:41240717..41240735,-!p2@FOXO1!1.05!70.07!FOXO1;;chr11:67007611..67007622,+!p6@KDM2A!1.05!13.64!KDM2A;;chr10:135121763..135121783,+!p5@ZNF511!1.05!10.16!ZNF511;;chr8:123794038..123794056,+!p5@ZHX2!1.05!10.16!ZHX2;;chr19:45977697..45977713,+!p4@FOSB!1.05!10.16!FOSB;;chr11:67007477..67007493,+!p2@KDM2A!1.04!86.12!KDM2A;;chr17:40440481..40440550,+!p1@STAT5A!1.04!72.48!STAT5A;;chr3:23986876..23986885,+!p4@NR1D2!1.04!14.17!NR1D2;;chr10:35416223..35416234,+!p12@CREM!1.04!9.90!CREM;;chr7:50344289..50344323,+!p1@IKZF1!1.04!9.90!IKZF1;;chr11:128392085..128392232,-!p1@ETS1!1.03!331.09!ETS1;;chr1:153895251..153895342,-!p2@GATAD2B!1.03!36.10!GATAD2B;;chr2:174828545..174828644,-!p1@SP3!1.02!146.82!SP3;;chr1:59249732..59249749,-!p2@JUN!1.02!115.53!JUN;;chr2:28616358..28616380,+!p3@FOSL2!1.02!50.28!FOSL2;;chr3:71542651..71542683,-!p22@FOXP1!1.02!9.36!FOXP1;;chr14:99737850..99737852,-!p3@BCL11B!1.02!9.36!BCL11B;;chr19:16435735..16435773,+!p4@KLF2!1.02!9.36!KLF2;;chr19:18392422..18392440,-!p1@JUND!1.01!1292.81!JUND;;chr3:5021113..5021180,+!p1@BHLHE40!1.01!652.55!BHLHE40;;chr6:91006575..91006602,-!p2@BACH2!1.01!13.91!BACH2;;chr14:35872494..35872511,-!p5@NFKBIA!1.01!12.30!NFKBIA;;chr3:63898321..63898396,+!p3@ATXN7!1.00!20.86!ATXN7;;chr19:18391593..18391611,-!p6@JUND!1.00!14.98!JUND;;chr6:106546786..106546802,+!p6@PRDM1!1.00!9.09!PRDM1;;chr14:90085458..90085557,-!p1@FOXN3!0.99!93.87!FOXN3;;chr14:74353454..74353469,+!p4@ZNF410!0.99!17.12!ZNF410;;chr15:31619407..31619419,+!p9@KLF13!0.99!10.97!KLF13;;chr14:69262947..69262986,-!p3@ZFP36L1!0.99!10.70!ZFP36L1;;chr17:38020516..38020544,-!p5@IKZF3!0.99!8.83!IKZF3;;chr3:71542615..71542644,-!p12@FOXP1!0.99!8.83!FOXP1;;chr9:129567282..129567353,+!p1@ZBTB43!0.98!115.80!ZBTB43;;chr9:32550839..32550962,-!p3@TOPORS!0.98!21.66!TOPORS;;chr17:36861675..36861697,+!p3@MLLT6!0.98!20.33!MLL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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000625;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988 | |||
|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor2.CNhs11956.11307-117C2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor2.CNhs11956.11307-117C2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor2.CNhs11956.11307-117C2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor2.CNhs11956.11307-117C2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor2.CNhs11956.11307-117C2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11307-117C2 | |id=FF:11307-117C2 | ||
|is_a=EFO:0002091;;FF:0000030;;FF:0000210 | |is_a=EFO:0002091;;FF:0000030;;FF:0000210 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11956!SRhi10010.CTTGTA | |||
|library_id_phase_based=2:CNhs11956 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11307 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10010.CTTGTA.11307 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11307 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10010.CTTGTA.11307 | |||
|name=CD8+ T Cells, donor2 | |name=CD8+ T Cells, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 43: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11956,LSID836,release011,COMPLETED | |profile_hcage=CNhs11956,LSID836,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10010,,, | |profile_srnaseq=SRhi10010,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=117 | |rna_box=117 | ||
|rna_catalog_number=3H100-26-10 | |rna_catalog_number=3H100-26-10 | ||
| Line 57: | Line 82: | ||
|rna_tube_id=117C2 | |rna_tube_id=117C2 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10010.CTTGTA | |||
|sample_age=57 | |sample_age=57 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 79: | Line 106: | ||
|top_motifs=RORA:3.33170510617;PITX1..3:3.30176171631;RFX2..5_RFXANK_RFXAP:3.24899083717;PAX3,7:3.23105522459;CREB1:3.22913469144;ATF4:3.20240188101;ATF5_CREB3:3.1430591932;T:3.13210971248;RUNX1..3:2.97514297507;FOX{D1,D2}:2.83644709083;FOXP1:2.78134001247;BPTF:2.74383178893;FOXN1:2.57857407995;TBX4,5:2.46045653029;NFKB1_REL_RELA:2.32645094827;NKX6-1,2:2.27312763554;FOXO1,3,4:2.24316260391;ZBTB16:2.18694352176;FOX{F1,F2,J1}:2.17176186244;DMAP1_NCOR{1,2}_SMARC:2.11672570883;HMX1:2.11442164128;IKZF2:2.08660311702;PAX2:2.0766493643;ELF1,2,4:2.04475109449;TOPORS:1.94867768057;RFX1:1.94445094631;ETS1,2:1.73353209459;PAX4:1.71072350622;JUN:1.66411278961;SPI1:1.51911658748;CDX1,2,4:1.49769125136;ATF6:1.47225693104;NKX2-1,4:1.40038048939;TGIF1:1.29098415881;ZNF384:1.26585270379;BREu{core}:1.19725888698;TLX2:1.12170519711;HIF1A:1.0936226741;IRF1,2:1.0783685598;AIRE:1.02953020496;ATF2:0.958005665111;SPIB:0.919017725334;PPARG:0.9128149511;LEF1_TCF7_TCF7L1,2:0.909295233335;FOX{I1,J2}:0.796384524699;NANOG{mouse}:0.779505227721;SMAD1..7,9:0.691233668569;EGR1..3:0.616097287488;EP300:0.595704440847;MAFB:0.590260484584;FOSL2:0.503804544044;MYB:0.485682611307;TFDP1:0.47105965944;RREB1:0.449873467061;NKX3-1:0.424991565778;GATA6:0.406108941456;HBP1_HMGB_SSRP1_UBTF:0.347709887734;NFE2L1:0.325400639575;FOXD3:0.313672297681;HMGA1,2:0.295451927172;FOXL1:0.278017618188;GCM1,2:0.275624323456;MYFfamily:0.264312958815;FOS_FOS{B,L1}_JUN{B,D}:0.247872749409;ELK1,4_GABP{A,B1}:0.243520296459;SOX2:0.161828187931;NFIL3:0.160320729949;NFATC1..3:0.144721380768;PAX6:0.113855970025;SREBF1,2:0.110146609291;HOX{A6,A7,B6,B7}:0.0289858241667;BACH2:0.0160032532451;RXRA_VDR{dimer}:-0.0273038764401;CUX2:-0.0274955603152;POU2F1..3:-0.0373308128512;NFIX:-0.0487424389864;IRF7:-0.051691262565;NFE2:-0.0537212896241;SNAI1..3:-0.108529077288;ZEB1:-0.151443875807;PDX1:-0.229855489009;MED-1{core}:-0.245395513974;FOXP3:-0.247772619777;CEBPA,B_DDIT3:-0.257951762459;STAT2,4,6:-0.263831458852;EVI1:-0.266197328854;SOX5:-0.300979980119;SPZ1:-0.312943486771;NFY{A,B,C}:-0.323729852616;AR:-0.352240673554;MTF1:-0.353469365819;E2F1..5:-0.357949391154;AHR_ARNT_ARNT2:-0.359379121816;TFAP4:-0.368670384251;ZNF423:-0.369429071306;MTE{core}:-0.371347091716;HES1:-0.398294266378;NR5A1,2:-0.412828255386;PAX5:-0.417182928754;FOXM1:-0.443936261643;TFAP2B:-0.459620864942;GLI1..3:-0.464219138029;SRF:-0.467463914816;HNF4A_NR2F1,2:-0.477252982867;PRRX1,2:-0.504428044134;LMO2:-0.51644239943;MYOD1:-0.532379702026;NKX2-2,8:-0.544300000627;HOXA9_MEIS1:-0.553962482224;NFE2L2:-0.567808540975;bHLH_family:-0.597220455339;XBP1:-0.617963257407;NRF1:-0.618448328999;PBX1:-0.621257812078;ZFP161:-0.629315553658;DBP:-0.64103104062;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.661893817683;ALX4:-0.662431935078;UFEwm:-0.663947819095;HLF:-0.683367348566;OCT4_SOX2{dimer}:-0.704561248011;ZBTB6:-0.715110300221;YY1:-0.735074173569;NHLH1,2:-0.757691278762;CRX:-0.760546192657;TFCP2:-0.781018347628;HNF1A:-0.789082374597;STAT5{A,B}:-0.795007640861;ZIC1..3:-0.817480635929;POU1F1:-0.832651888878;PATZ1:-0.864511568197;TEF:-0.904232588127;REST:-0.91979699911;FOXA2:-0.929937743373;MZF1:-0.937427209372;TFAP2{A,C}:-0.939598709443;FOXQ1:-0.979167047809;GATA4:-0.98908387758;TAL1_TCF{3,4,12}:-0.992015582649;MAZ:-1.02874828245;PAX8:-1.06770443007;POU6F1:-1.07896184079;ALX1:-1.08512866202;HSF1,2:-1.08598695774;NANOG:-1.10923780946;HAND1,2:-1.12212119318;HIC1:-1.14068886329;SOX{8,9,10}:-1.1991401627;NR1H4:-1.20233572194;POU3F1..4:-1.23260244649;SP1:-1.25997980094;ZNF143:-1.26687960032;MEF2{A,B,C,D}:-1.26750168818;ZNF238:-1.31135776857;ZNF148:-1.32355661435;ESRRA:-1.38500423975;SOX17:-1.39511768344;TP53:-1.39808781951;RXR{A,B,G}:-1.41046020712;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.41238685249;CDC5L:-1.4397391755;LHX3,4:-1.46238827456;XCPE1{core}:-1.50980449067;STAT1,3:-1.51042669823;TBP:-1.53110680605;NR6A1:-1.53380098955;GFI1:-1.53507920254;HOX{A5,B5}:-1.61871003787;MYBL2:-1.67681279843;GTF2I:-1.71132864576;ONECUT1,2:-1.71653163891;RBPJ:-1.74240644172;ARID5B:-1.74849035267;NKX2-3_NKX2-5:-1.75090054363;HOX{A4,D4}:-1.77288905782;TEAD1:-1.77528094427;GFI1B:-1.79922424041;GTF2A1,2:-1.87325005641;EN1,2:-2.01275106648;ESR1:-2.02428421234;POU5F1:-2.06593860969;GZF1:-2.07949147465;TLX1..3_NFIC{dimer}:-2.16670201288;NKX3-2:-2.27135399945;EBF1:-2.30956028671;KLF4:-2.33092353578;IKZF1:-2.3966241777;PRDM1:-2.43240285126;VSX1,2:-2.45090768326;ADNP_IRX_SIX_ZHX:-2.55984303269;PAX1,9:-2.67968318146;NR3C1:-3.71531058595 | |top_motifs=RORA:3.33170510617;PITX1..3:3.30176171631;RFX2..5_RFXANK_RFXAP:3.24899083717;PAX3,7:3.23105522459;CREB1:3.22913469144;ATF4:3.20240188101;ATF5_CREB3:3.1430591932;T:3.13210971248;RUNX1..3:2.97514297507;FOX{D1,D2}:2.83644709083;FOXP1:2.78134001247;BPTF:2.74383178893;FOXN1:2.57857407995;TBX4,5:2.46045653029;NFKB1_REL_RELA:2.32645094827;NKX6-1,2:2.27312763554;FOXO1,3,4:2.24316260391;ZBTB16:2.18694352176;FOX{F1,F2,J1}:2.17176186244;DMAP1_NCOR{1,2}_SMARC:2.11672570883;HMX1:2.11442164128;IKZF2:2.08660311702;PAX2:2.0766493643;ELF1,2,4:2.04475109449;TOPORS:1.94867768057;RFX1:1.94445094631;ETS1,2:1.73353209459;PAX4:1.71072350622;JUN:1.66411278961;SPI1:1.51911658748;CDX1,2,4:1.49769125136;ATF6:1.47225693104;NKX2-1,4:1.40038048939;TGIF1:1.29098415881;ZNF384:1.26585270379;BREu{core}:1.19725888698;TLX2:1.12170519711;HIF1A:1.0936226741;IRF1,2:1.0783685598;AIRE:1.02953020496;ATF2:0.958005665111;SPIB:0.919017725334;PPARG:0.9128149511;LEF1_TCF7_TCF7L1,2:0.909295233335;FOX{I1,J2}:0.796384524699;NANOG{mouse}:0.779505227721;SMAD1..7,9:0.691233668569;EGR1..3:0.616097287488;EP300:0.595704440847;MAFB:0.590260484584;FOSL2:0.503804544044;MYB:0.485682611307;TFDP1:0.47105965944;RREB1:0.449873467061;NKX3-1:0.424991565778;GATA6:0.406108941456;HBP1_HMGB_SSRP1_UBTF:0.347709887734;NFE2L1:0.325400639575;FOXD3:0.313672297681;HMGA1,2:0.295451927172;FOXL1:0.278017618188;GCM1,2:0.275624323456;MYFfamily:0.264312958815;FOS_FOS{B,L1}_JUN{B,D}:0.247872749409;ELK1,4_GABP{A,B1}:0.243520296459;SOX2:0.161828187931;NFIL3:0.160320729949;NFATC1..3:0.144721380768;PAX6:0.113855970025;SREBF1,2:0.110146609291;HOX{A6,A7,B6,B7}:0.0289858241667;BACH2:0.0160032532451;RXRA_VDR{dimer}:-0.0273038764401;CUX2:-0.0274955603152;POU2F1..3:-0.0373308128512;NFIX:-0.0487424389864;IRF7:-0.051691262565;NFE2:-0.0537212896241;SNAI1..3:-0.108529077288;ZEB1:-0.151443875807;PDX1:-0.229855489009;MED-1{core}:-0.245395513974;FOXP3:-0.247772619777;CEBPA,B_DDIT3:-0.257951762459;STAT2,4,6:-0.263831458852;EVI1:-0.266197328854;SOX5:-0.300979980119;SPZ1:-0.312943486771;NFY{A,B,C}:-0.323729852616;AR:-0.352240673554;MTF1:-0.353469365819;E2F1..5:-0.357949391154;AHR_ARNT_ARNT2:-0.359379121816;TFAP4:-0.368670384251;ZNF423:-0.369429071306;MTE{core}:-0.371347091716;HES1:-0.398294266378;NR5A1,2:-0.412828255386;PAX5:-0.417182928754;FOXM1:-0.443936261643;TFAP2B:-0.459620864942;GLI1..3:-0.464219138029;SRF:-0.467463914816;HNF4A_NR2F1,2:-0.477252982867;PRRX1,2:-0.504428044134;LMO2:-0.51644239943;MYOD1:-0.532379702026;NKX2-2,8:-0.544300000627;HOXA9_MEIS1:-0.553962482224;NFE2L2:-0.567808540975;bHLH_family:-0.597220455339;XBP1:-0.617963257407;NRF1:-0.618448328999;PBX1:-0.621257812078;ZFP161:-0.629315553658;DBP:-0.64103104062;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.661893817683;ALX4:-0.662431935078;UFEwm:-0.663947819095;HLF:-0.683367348566;OCT4_SOX2{dimer}:-0.704561248011;ZBTB6:-0.715110300221;YY1:-0.735074173569;NHLH1,2:-0.757691278762;CRX:-0.760546192657;TFCP2:-0.781018347628;HNF1A:-0.789082374597;STAT5{A,B}:-0.795007640861;ZIC1..3:-0.817480635929;POU1F1:-0.832651888878;PATZ1:-0.864511568197;TEF:-0.904232588127;REST:-0.91979699911;FOXA2:-0.929937743373;MZF1:-0.937427209372;TFAP2{A,C}:-0.939598709443;FOXQ1:-0.979167047809;GATA4:-0.98908387758;TAL1_TCF{3,4,12}:-0.992015582649;MAZ:-1.02874828245;PAX8:-1.06770443007;POU6F1:-1.07896184079;ALX1:-1.08512866202;HSF1,2:-1.08598695774;NANOG:-1.10923780946;HAND1,2:-1.12212119318;HIC1:-1.14068886329;SOX{8,9,10}:-1.1991401627;NR1H4:-1.20233572194;POU3F1..4:-1.23260244649;SP1:-1.25997980094;ZNF143:-1.26687960032;MEF2{A,B,C,D}:-1.26750168818;ZNF238:-1.31135776857;ZNF148:-1.32355661435;ESRRA:-1.38500423975;SOX17:-1.39511768344;TP53:-1.39808781951;RXR{A,B,G}:-1.41046020712;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.41238685249;CDC5L:-1.4397391755;LHX3,4:-1.46238827456;XCPE1{core}:-1.50980449067;STAT1,3:-1.51042669823;TBP:-1.53110680605;NR6A1:-1.53380098955;GFI1:-1.53507920254;HOX{A5,B5}:-1.61871003787;MYBL2:-1.67681279843;GTF2I:-1.71132864576;ONECUT1,2:-1.71653163891;RBPJ:-1.74240644172;ARID5B:-1.74849035267;NKX2-3_NKX2-5:-1.75090054363;HOX{A4,D4}:-1.77288905782;TEAD1:-1.77528094427;GFI1B:-1.79922424041;GTF2A1,2:-1.87325005641;EN1,2:-2.01275106648;ESR1:-2.02428421234;POU5F1:-2.06593860969;GZF1:-2.07949147465;TLX1..3_NFIC{dimer}:-2.16670201288;NKX3-2:-2.27135399945;EBF1:-2.30956028671;KLF4:-2.33092353578;IKZF1:-2.3966241777;PRDM1:-2.43240285126;VSX1,2:-2.45090768326;ADNP_IRX_SIX_ZHX:-2.55984303269;PAX1,9:-2.67968318146;NR3C1:-3.71531058595 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11307-117C2;search_select_hide=table117:FF:11307-117C2 | |||
}} | }} | ||
Latest revision as of 16:32, 3 June 2020
| Name: | CD8+ T Cells, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11956,SRhi10010.CTTGTA |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11956
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11956
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.954 |
| 10 | 10 | 0.00619 |
| 100 | 100 | 0.735 |
| 101 | 101 | 0.186 |
| 102 | 102 | 0.774 |
| 103 | 103 | 0.28 |
| 104 | 104 | 0.929 |
| 105 | 105 | 0.91 |
| 106 | 106 | 0.124 |
| 107 | 107 | 0.0632 |
| 108 | 108 | 0.749 |
| 109 | 109 | 0.986 |
| 11 | 11 | 0.74 |
| 110 | 110 | 0.36 |
| 111 | 111 | 0.476 |
| 112 | 112 | 0.802 |
| 113 | 113 | 0.26 |
| 114 | 114 | 0.701 |
| 115 | 115 | 0.566 |
| 116 | 116 | 0.192 |
| 117 | 117 | 0.0079 |
| 118 | 118 | 0.537 |
| 119 | 119 | 0.585 |
| 12 | 12 | 0.78 |
| 120 | 120 | 0.253 |
| 121 | 121 | 0.601 |
| 122 | 122 | 0.727 |
| 123 | 123 | 3.68154e-6 |
| 124 | 124 | 0.972 |
| 125 | 125 | 0.901 |
| 126 | 126 | 0.702 |
| 127 | 127 | 0.397 |
| 128 | 128 | 0.772 |
| 129 | 129 | 0.155 |
| 13 | 13 | 0.672 |
| 130 | 130 | 0.146 |
| 131 | 131 | 0.228 |
| 132 | 132 | 0.284 |
| 133 | 133 | 0.816 |
| 134 | 134 | 0.676 |
| 135 | 135 | 0.185 |
| 136 | 136 | 0.739 |
| 137 | 137 | 0.0626 |
| 138 | 138 | 0.69 |
| 139 | 139 | 0.102 |
| 14 | 14 | 0.492 |
| 140 | 140 | 0.799 |
| 141 | 141 | 0.948 |
| 142 | 142 | 0.326 |
| 143 | 143 | 0.0338 |
| 144 | 144 | 0.997 |
| 145 | 145 | 0.499 |
| 146 | 146 | 0.361 |
| 147 | 147 | 0.0418 |
| 148 | 148 | 0.259 |
| 149 | 149 | 0.216 |
| 15 | 15 | 0.456 |
| 150 | 150 | 0.828 |
| 151 | 151 | 0.496 |
| 152 | 152 | 0.917 |
| 153 | 153 | 0.404 |
| 154 | 154 | 0.0813 |
| 155 | 155 | 0.0925 |
| 156 | 156 | 0.909 |
| 157 | 157 | 0.726 |
| 158 | 158 | 0.0109 |
| 159 | 159 | 0.881 |
| 16 | 16 | 0.229 |
| 160 | 160 | 0.0671 |
| 161 | 161 | 0.676 |
| 162 | 162 | 0.0589 |
| 163 | 163 | 0.651 |
| 164 | 164 | 0.055 |
| 165 | 165 | 0.866 |
| 166 | 166 | 0.544 |
| 167 | 167 | 0.121 |
| 168 | 168 | 0.41 |
| 169 | 169 | 0.282 |
| 17 | 17 | 0.548 |
| 18 | 18 | 0.762 |
| 19 | 19 | 0.0616 |
| 2 | 2 | 0.188 |
| 20 | 20 | 0.142 |
| 21 | 21 | 0.999 |
| 22 | 22 | 0.146 |
| 23 | 23 | 0.732 |
| 24 | 24 | 0.379 |
| 25 | 25 | 0.238 |
| 26 | 26 | 0.996 |
| 27 | 27 | 0.461 |
| 28 | 28 | 0.308 |
| 29 | 29 | 0.0953 |
| 3 | 3 | 0.588 |
| 30 | 30 | 0.0358 |
| 31 | 31 | 0.564 |
| 32 | 32 | 0.0373 |
| 33 | 33 | 0.593 |
| 34 | 34 | 0.251 |
| 35 | 35 | 0.342 |
| 36 | 36 | 0.187 |
| 37 | 37 | 0.359 |
| 38 | 38 | 0.598 |
| 39 | 39 | 0.509 |
| 4 | 4 | 0.8 |
| 40 | 40 | 0.803 |
| 41 | 41 | 0.237 |
| 42 | 42 | 0.4 |
| 43 | 43 | 0.618 |
| 44 | 44 | 0.605 |
| 45 | 45 | 0.101 |
| 46 | 46 | 0.912 |
| 47 | 47 | 0.763 |
| 48 | 48 | 0.941 |
| 49 | 49 | 0.185 |
| 5 | 5 | 0.832 |
| 50 | 50 | 0.435 |
| 51 | 51 | 0.977 |
| 52 | 52 | 0.958 |
| 53 | 53 | 0.243 |
| 54 | 54 | 0.945 |
| 55 | 55 | 0.847 |
| 56 | 56 | 0.726 |
| 57 | 57 | 0.977 |
| 58 | 58 | 0.21 |
| 59 | 59 | 0.219 |
| 6 | 6 | 0.909 |
| 60 | 60 | 0.607 |
| 61 | 61 | 0.282 |
| 62 | 62 | 0.369 |
| 63 | 63 | 0.827 |
| 64 | 64 | 0.986 |
| 65 | 65 | 0.534 |
| 66 | 66 | 0.318 |
| 67 | 67 | 0.475 |
| 68 | 68 | 0.851 |
| 69 | 69 | 0.873 |
| 7 | 7 | 0.842 |
| 70 | 70 | 0.2 |
| 71 | 71 | 0.265 |
| 72 | 72 | 0.594 |
| 73 | 73 | 0.498 |
| 74 | 74 | 0.545 |
| 75 | 75 | 0.0558 |
| 76 | 76 | 0.0946 |
| 77 | 77 | 0.00272 |
| 78 | 78 | 0.724 |
| 79 | 79 | 0.586 |
| 8 | 8 | 0.302 |
| 80 | 80 | 0.173 |
| 81 | 81 | 0.906 |
| 82 | 82 | 0.667 |
| 83 | 83 | 0.782 |
| 84 | 84 | 0.115 |
| 85 | 85 | 0.665 |
| 86 | 86 | 0.0384 |
| 87 | 87 | 0.957 |
| 88 | 88 | 0.947 |
| 89 | 89 | 0.00157 |
| 9 | 9 | 0.579 |
| 90 | 90 | 0.664 |
| 91 | 91 | 0.791 |
| 92 | 92 | 0.909 |
| 93 | 93 | 0.958 |
| 94 | 94 | 0.325 |
| 95 | 95 | 0.203 |
| 96 | 96 | 0.792 |
| 97 | 97 | 0.214 |
| 98 | 98 | 0.529 |
| 99 | 99 | 8.09635e-6 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11956
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)
