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{{f5samples
{{f5samples
|id=FF:11354-117H4
|DRA_sample_Accession=CAGE@SAMD00005116
|name=Osteoblast, donor2
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005116
|sample_id=11354
|accession_numbers=CAGE;DRX008393;DRR009265;DRZ000690;DRZ002075;DRZ012040;DRZ013425
|rna_tube_id=117H4
|accession_numbers_RNASeq=sRNA-Seq;DRX037052;DRR041418;DRZ007060
|rna_box=117
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|rna_position=H4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000055,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000062
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Cell Applications
|rna_lot_number=1428
|rna_catalog_number=CA406-R10f
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=22 weeks old fetus
|sample_tissue=bone
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=embryo 22week
|sample_ethnicity=U
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=osteoblast
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=1
|sample_note=
|profile_hcage=CNhs11385,LSID771,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10004,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000035,CL:0000048,CL:0000055,CL:0000062,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000335,CL:0000375,CL:0000548,CL:0000723,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000127,FF:0000128
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr1:170633348..170633399,+!p2@PRRX1!1.76!76.39!PRRX1;;chr1:170632285..170632309,+!p1@PRRX1!1.61!44.50!PRRX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.58!37.20!HOXC5;;chr7:19157248..19157268,-!p1@TWIST1!1.53!87.68!TWIST1;;chr7:96654133..96654150,-!p1@DLX5!1.46!27.90!DLX5;;chr9:132427883..132427951,+!p2@PRRX2!1.40!23.91!PRRX2;;chr11:46299199..46299233,+!p1@CREB3L1!1.38!114.91!CREB3L1;;chr19:13134772..13134822,+!p2@NFIX!1.34!30.55!NFIX;;chr12:66218255..66218304,+!p3@HMGA2!1.32!52.47!HMGA2;;chr15:57511609..57511651,+!p2@TCF12!1.31!32.55!TCF12;;chr11:46299539..46299620,+!p2@CREB3L1!1.29!31.22!CREB3L1;;chr9:132427972..132428056,+!p1@PRRX2!1.20!19.26!PRRX2;;chr14:61116183..61116208,-!p1@SIX1!1.19!55.13!SIX1;;chr5:134369905..134369972,-!p1@PITX1!1.17!21.26!PITX1;;chr12:54379029..54379057,+!p2@HOXC10!1.17!13.95!HOXC10;;chr1:170632959..170632987,+!p4@PRRX1!1.16!14.61!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!1.15!13.28!PRRX1;;chr1:170633262..170633285,+!p3@PRRX1!1.14!14.61!PRRX1;;chr12:54380404..54380433,+!p3@HOXC10!1.13!12.62!HOXC10;;chr12:66218598..66218645,+!p2@HMGA2!1.12!55.79!HMGA2;;chr16:86600426..86600441,+!p1@FOXC2!1.12!29.89!FOXC2;;chr12:66218212..66218244,+!p5@HMGA2!1.12!17.93!HMGA2;;chr5:72744594..72744609,-!p1@FOXD1!1.08!50.48!FOXD1;;chr1:170632477..170632506,+!p6@PRRX1!1.07!10.63!PRRX1;;chr6:45296048..45296082,+!p1@RUNX2!1.06!11.96!RUNX2;;chr7:27205136..27205164,-!p1@HOXA9!1.04!9.96!HOXA9;;chr7:96654026..96654061,-!p2@DLX5!1.04!9.96!DLX5;;chr12:66218836..66218888,+!p1@HMGA2!1.03!92.33!HMGA2;;chr8:25902876..25902936,-!p1@EBF2!1.01!9.30!EBF2;;chr15:96869255..96869291,+!p6@NR2F2!1.00!16.61!NR2F2;;chr7:27224842..27224872,-!p1@HOXA11!0.98!8.63!HOXA11;;chr21:30671690..30671762,+!p2@BACH1!0.96!28.56!BACH1;;chr2:200322654..200322707,-!p2@SATB2!0.96!11.96!SATB2;;chr6:34204921..34204939,+!p3@HMGA1!0.95!243.77!HMGA1;;chr5:72744445..72744466,-!p2@FOXD1!0.95!13.28!FOXD1;;chr7:27213893..27213954,-!p1@HOXA10!0.95!7.97!HOXA10;;chr7:27224795..27224840,-!p2@HOXA11!0.95!7.97!HOXA11;;chr12:54393880..54393962,+!p1@HOXC9!0.95!7.97!HOXC9;;chr12:80084279..80084293,-!p8@PAWR!0.93!12.62!PAWR;;chr15:96869222..96869251,+!p18@NR2F2!0.92!8.63!NR2F2;;chr12:54402745..54402788,+!p1@HOXC8!0.92!7.31!HOXC8;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.92!7.31!HOXC5;;chr2:176994408..176994492,+!p1@HOXD8!0.92!7.31!HOXD8;;chr3:71630980..71631110,-!p3@FOXP1!0.91!25.90!FOXP1;;chr15:96873861..96873872,+!p9@NR2F2!0.89!14.61!NR2F2;;chr12:66218183..66218209,+!p4@HMGA2!0.89!13.28!HMGA2;;chr7:137686763..137686784,-!p5@CREB3L2!0.89!11.96!CREB3L2;;chr7:27192185..27192209,-!p1@HOXA3!0.88!6.64!HOXA3;;chr7:27196217..27196246,-!p2@HOXA7!0.88!6.64!HOXA7;;chr1:170632723..170632739,+!p8@PRRX1!0.88!6.64!PRRX1;;chr14:62162285..62162296,+!p3@HIF1A!0.85!33.21!HIF1A;;chr12:80085061..80085119,-!p6@PAWR!0.85!9.96!PAWR;;chr5:134369879..134369898,-!p2@PITX1!0.84!5.98!PITX1;;chr2:5832508..5832524,+!p1@SOX11!0.84!5.98!SOX11;;chr1:170632137..170632172,+!p10@PRRX1!0.84!5.98!PRRX1;;chr1:170632250..170632277,+!p7@PRRX1!0.84!5.98!PRRX1;;chr8:49833948..49833973,-!p2@SNAI2!0.81!37.20!SNAI2;;chr7:27205106..27205134,-!p2@HOXA9!0.80!5.31!HOXA9;;chr7:96635178..96635181,+!p1@DLX6!0.80!5.31!DLX6;;chr19:47523058..47523114,+!p1@NPAS1!0.80!5.31!NPAS1;;chr11:46316699..46316719,+!p10@CREB3L1!0.80!5.31!CREB3L1;;chr2:102091144..102091183,-!p2@RFX8!0.80!5.31!RFX8;;chr18:19749541..19749557,+!p1@GATA6!0.79!17.27!GATA6;;chr7:19157043..19157088,-!p2@TWIST1!0.79!13.95!TWIST1;;chr14:62162258..62162269,+!p2@HIF1A!0.78!52.47!HIF1A;;chr14:24837368..24837401,+!p1@NFATC4!0.78!12.62!NFATC4;;chr15:96874216..96874236,+!p13@NR2F2!0.77!7.97!NR2F2;;chr15:96875041..96875052,+!p17@NR2F2!0.77!7.31!NR2F2;;chr15:96869114..96869160,+!p11@NR2F2!0.76!6.64!NR2F2;;chr9:16870659..16870675,-!p2@BNC2!0.76!5.98!BNC2;;chr8:77593474..77593612,+!p1@ZFHX4!0.75!21.26!ZFHX4;;chr2:200323414..200323455,-!p1@SATB2!0.75!10.63!SATB2;;chr19:13134457..13134462,+!p5@NFIX!0.75!8.63!NFIX;;chr5:72744562..72744573,-!p3@FOXD1!0.75!5.98!FOXD1;;chr8:77593448..77593471,+!p2@ZFHX4!0.75!4.65!ZFHX4;;chr12:54378923..54378966,+!p1@HOXC10!0.75!4.65!HOXC10;;chr15:57511589..57511608,+!p4@TCF12!0.75!4.65!TCF12;;chrY:2803415..2803468,+!p1@ZFY!0.75!4.65!ZFY;;chrY:21906594..21906622,-!p1@KDM5D!0.75!4.65!KDM5D;;chr1:151032860..151032918,+!p1@MLLT11!0.74!59.78!MLLT11;;chr14:61116168..61116180,-!p2@SIX1!0.74!5.31!SIX1;;chr11:65667884..65667895,-!p2@FOSL1!0.73!18.60!FOSL1;;chr11:65686802..65686818,+!p6@DRAP1!0.73!7.97!DRAP1;;chr15:96869292..96869320,+!p15@NR2F2!0.73!6.64!NR2F2;;chr14:62162224..62162254,+!p1@HIF1A!0.72!692.12!HIF1A;;chr12:53614115..53614154,-!p1@RARG!0.72!25.24!RARG;;chr2:121493425..121493474,+!p1@GLI2!0.71!9.96!GLI2;;chr16:54320646..54320672,-!p2@IRX3!0.71!6.64!IRX3;;chr8:49833978..49833996,-!p1@SNAI2!0.70!94.98!SNAI2;;chr15:96876966..96877017,+!p12@NR2F2!0.70!5.98!NR2F2;;chr18:19749386..19749404,+!p2@GATA6!0.70!5.98!GATA6;;chr16:54320617..54320643,-!p3@IRX3!0.70!5.31!IRX3;;chr6:45390077..45390105,+!p9@RUNX2!0.70!5.31!RUNX2;;chr16:54319010..54319041,-!p8@IRX3!0.70!3.99!IRX3;;chr16:86600870..86600921,+!p2@FOXC2!0.70!3.99!FOXC2;;chr19:13135582..13135600,+!p3@NFIX!0.70!3.99!NFIX;;chr12:54378984..54378996,+!p7@HOXC10!0.70!3.99!HOXC10;;chr2:45236540..45236577,-!p1@SIX2!0.70!3.99!SIX2;;chr4:174451370..174451387,-!p1@HAND2!0.70!3.99!HAND2;;chr1:170632439..170632465,+!p11@PRRX1!0.70!3.99!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!0.70!3.99!PRRX1;;chr5:321810..321877,+!p1@AHRR!0.69!13.95!AHRR;;chr5:72743793..72743855,-!p4@FOXD1!0.69!4.65!FOXD1;;chr6:85474299..85474324,-!p1@TBX18!0.68!7.31!TBX18;;chr12:66218573..66218596,+!p7@HMGA2!0.68!5.98!HMGA2;;chr16:73093174..73093209,-!p3@ZFHX3!0.68!5.31!ZFHX3;;chr10:63809013..63809041,+!p3@ARID5B!0.67!23.25!ARID5B;;chr15:37392724..37392757,-!p1@MEIS2!0.67!19.26!MEIS2;;chr17:59477233..59477263,+!p1@TBX2!0.67!12.62!TBX2;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.67!3.99!GLIS1;;chr19:38720294..38720348,-!p1@DPF1!0.66!4.65!DPF1;;chr15:96874244..96874259,+!p5@NR2F2!0.65!9.30!NR2F2;;chr15:96874145..96874166,+!p7@NR2F2!0.65!7.31!NR2F2;;chr3:71631151..71631194,-!p15@FOXP1!0.65!3.99!FOXP1;;chr1:170632907..170632916,+!p22@PRRX1!0.64!3.32!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.64!3.32!PRRX1;;chr1:197886461..197886558,+!p1@LHX9!0.64!3.32!LHX9;;chr1:25291475..25291511,-!p2@RUNX3!0.64!3.32!RUNX3;;chr21:40032884..40032915,-!p2@ERG!0.64!3.32!ERG;;chr12:115122318..115122331,-!p2@TBX3!0.64!3.32!TBX3;;chr12:54379136..54379150,+!p4@HOXC5!0.64!3.32!HOXC5;;chr12:66218904..66218913,+!p11@HMGA2!0.64!3.32!HMGA2;;chr12:66218923..66218934,+!p14@HMGA2!0.64!3.32!HMGA2;;chr12:66357214..66357233,+!p13@HMGA2!0.64!3.32!HMGA2;;chr12:80085120..80085156,-!p14@PAWR!0.64!3.32!PAWR;;chr15:96869165..96869183,+!p20@NR2F2!0.64!3.32!NR2F2;;chr16:86600458..86600461,+!p3@FOXC2!0.64!3.32!FOXC2;;chr6:134210243..134210257,+!p1@TCF21!0.64!3.32!TCF21;;chr6:1612300..1612324,+!p3@FOXC1!0.64!3.32!FOXC1;;chr7:15726296..15726315,-!p1@MEOX2!0.64!3.32!MEOX2;;chr7:96635277..96635301,+!p7@DLX6!0.64!3.32!DLX6;;chr15:96873921..96873946,+!p1@NR2F2!0.63!109.60!NR2F2;;chr15:96874012..96874042,+!p2@NR2F2!0.61!33.21!NR2F2;;chr11:65686732..65686756,+!p2@DRAP1!0.61!15.28!DRAP1;;chr18:19749517..19749531,+!p3@GATA6!0.61!5.98!GATA6;;chr15:37390374..37390422,-!p9@MEIS2!0.61!3.99!MEIS2;;chr3:157823517..157823562,-!p1@SHOX2!0.61!3.32!SHOX2;;chr12:124873357..124873401,-!p1@NCOR2!0.60!41.85!NCOR2;;chr19:20278012..20278034,+!p1@ZNF486!0.60!29.89!ZNF486;;chr12:80084167..80084197,-!p5@PAWR!0.60!7.97!PAWR;;chr10:63809077..63809089,+!p5@ARID5B!0.60!7.31!ARID5B;;chr2:85981222..85981259,+!p2@ATOH8!0.60!5.31!ATOH8;;chr16:54964740..54964789,+!p1@IRX5!0.60!4.65!IRX5;;chr12:66218443..66218461,+!p8@HMGA2!0.60!3.99!HMGA2;;chr12:115121962..115121987,-!p1@TBX3!0.59!29.23!TBX3;;chr8:67525524..67525543,-!p3@MYBL1!0.59!5.31!MYBL1;;chr19:45260775..45260838,+!p5@BCL3!0.59!3.99!BCL3;;chr12:80084137..80084165,-!p10@PAWR!0.59!3.99!PAWR;;chr11:46299186..46299195,+!p3@CREB3L1!0.59!3.32!CREB3L1;;chr18:46475696..46475713,-!p1@SMAD7!0.59!3.32!SMAD7;;chr19:44037546..44037594,+!p1@ZNF575!0.58!6.64!ZNF575;;chr2:239756739..239756755,+!p2@TWIST2!0.58!5.31!TWIST2;;chr3:141121847..141121868,+!p5@ZBTB38!0.58!4.65!ZBTB38;;chr17:59477275..59477286,+!p3@TBX2!0.58!3.99!TBX2;;chr15:83953397..83953425,-!p1@BNC1!0.58!3.32!BNC1;;chr12:66218378..66218401,+!p6@HMGA2!0.57!4.65!HMGA2;;chr11:65687243..65687276,+!p8@DRAP1!0.57!3.99!DRAP1;;chr11:65667846..65667868,-!p1@FOSL1!0.56!87.68!FOSL1;;chr6:19837592..19837621,+!p1@ID4!0.56!19.93!ID4;;chr5:139492456..139492489,+!p7@PURA!0.56!2.66!PURA;;chr7:27183291..27183324,-!p1@HOXA5!0.56!2.66!HOXA5;;chr7:27196267..27196311,-!p1@HOXA7!0.56!2.66!HOXA7;;chr7:27213872..27213886,-!p4@HOXA10!0.56!2.66!HOXA10;;chr8:93074848..93074871,-!p3@RUNX1T1!0.56!2.66!RUNX1T1;;chr11:46299443..46299459,+!p4@CREB3L1!0.56!2.66!CREB3L1;;chr11:46333934..46333963,+!p5@CREB3L1!0.56!2.66!CREB3L1;;chr12:54366975..54367001,+!p1@HOXC11!0.56!2.66!HOXC11;;chr12:54367122..54367144,+!p4@HOXC11!0.56!2.66!HOXC11;;chr12:54380036..54380091,+!p4@HOXC10!0.56!2.66!HOXC10;;chr12:54394309..54394336,+!p2@HOXC9!0.56!2.66!HOXC9;;chr12:66358080..66358094,+!p15@HMGA2!0.56!2.66!HMGA2;;chr1:119530493..119530572,-!p1@TBX15!0.56!2.66!TBX15;;chr1:119530706..119530736,-!p3@TBX15!0.56!2.66!TBX15;;chr1:170632867..170632878,+!p21@PRRX1!0.56!2.66!PRRX1;;chr1:25256175..25256228,-!p5@RUNX3!0.56!2.66!RUNX3;;chr1:2985760..2985774,+!p1@PRDM16!0.56!2.66!PRDM16;;chr1:44513995..44514031,+!p1@KLF17!0.56!2.66!KLF17;;chr21:38071430..38071456,+!p1@SIM2!0.56!2.66!SIM2;;chr16:86601088..86601105,+!p5@FOXC2!0.56!2.66!FOXC2;;chr19:13135386..13135435,+!p4@NFIX!0.56!2.66!NFIX;;chr2:172949484..172949522,+!p1@DLX1!0.56!2.66!DLX1;;chr3:25470156..25470227,+!p2@RARB!0.56!2.66!RARB;;chr4:174450089..174450153,-!p2@HAND2!0.56!2.66!HAND2;;chr11:65686952..65686975,+!p5@DRAP1!0.55!17.27!DRAP1;;chr1:200379104..200379128,-!p2@ZNF281!0.55!7.31!ZNF281;;chr8:72756023..72756055,-!p6@MSC!0.55!3.32!MSC;;chr1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Line 66: Line 43:
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|fonse_treatment_closure=
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|library_id=CNhs11385
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11354
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10004.CGTACG.11354
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|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10004.CGTACG.11354
|name=Osteoblast, donor2
|namespace=FANTOM5
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|rna_box=117
|rna_catalog_number=CA406-R10f
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=1428
|rna_od260/230=
|rna_od260/280=
|rna_position=H4
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=117H4
|rna_weight_ug=10
|rnaseq_library_id=SRhi10004.CGTACG
|sample_age=embryo 22week
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=osteoblast
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Cell Applications
|sample_description=
|sample_dev_stage=22 weeks old fetus
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=U
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.28546642427268e-241!GO:0043226;organelle;3.44933404554594e-199!GO:0043229;intracellular organelle;7.06394130850015e-199!GO:0043231;intracellular membrane-bound organelle;1.44059221307484e-193!GO:0043227;membrane-bound organelle;3.23307565346004e-193!GO:0005737;cytoplasm;1.52645165759765e-176!GO:0044422;organelle part;7.84596587587991e-152!GO:0044446;intracellular organelle part;2.17827680893141e-150!GO:0044444;cytoplasmic part;2.39329727245272e-121!GO:0032991;macromolecular complex;7.79994941634091e-108!GO:0044237;cellular metabolic process;5.64788733535517e-91!GO:0044238;primary metabolic process;1.82434717848459e-90!GO:0030529;ribonucleoprotein complex;1.69448296763199e-87!GO:0043170;macromolecule metabolic process;2.29695427270859e-87!GO:0005634;nucleus;8.0226697414517e-85!GO:0005515;protein binding;7.49096964483991e-83!GO:0044428;nuclear part;1.68355454628115e-77!GO:0043233;organelle lumen;5.41138287398335e-75!GO:0031974;membrane-enclosed lumen;5.41138287398335e-75!GO:0003723;RNA binding;1.51280348371662e-73!GO:0005739;mitochondrion;8.5948261764659e-58!GO:0043234;protein complex;1.4711483943178e-55!GO:0016043;cellular component organization and biogenesis;6.41809704478284e-55!GO:0006396;RNA processing;1.87775277471394e-51!GO:0005840;ribosome;6.41779691977787e-50!GO:0043283;biopolymer metabolic process;8.66652944342676e-50!GO:0019538;protein metabolic process;1.15232305621362e-48!GO:0006412;translation;7.41959668026419e-48!GO:0031090;organelle membrane;3.14409439927817e-46!GO:0031981;nuclear lumen;5.73548720529951e-46!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.75413008309744e-44!GO:0003735;structural constituent of ribosome;1.48501171367382e-43!GO:0044260;cellular macromolecule metabolic process;1.80985408094738e-43!GO:0033036;macromolecule localization;2.61796302466591e-43!GO:0010467;gene expression;2.87774400116854e-43!GO:0044267;cellular protein metabolic process;7.28587692972046e-43!GO:0015031;protein transport;2.14304173210525e-42!GO:0043228;non-membrane-bound organelle;4.81898012556984e-41!GO:0043232;intracellular non-membrane-bound organelle;4.81898012556984e-41!GO:0016071;mRNA metabolic process;5.90137911166606e-41!GO:0008104;protein localization;1.84868479587053e-39!GO:0045184;establishment of protein localization;2.33478765480173e-39!GO:0044429;mitochondrial part;4.31432620968894e-39!GO:0009058;biosynthetic process;5.91379874635312e-38!GO:0033279;ribosomal subunit;6.28713455291622e-38!GO:0006996;organelle organization and biogenesis;1.63096375540601e-37!GO:0005829;cytosol;1.65014688456765e-37!GO:0009059;macromolecule biosynthetic process;2.25189340961089e-37!GO:0008380;RNA splicing;2.47113119690796e-37!GO:0006397;mRNA processing;3.44739992916061e-36!GO:0044249;cellular biosynthetic process;4.39709045034215e-36!GO:0031967;organelle envelope;8.01135636306547e-36!GO:0046907;intracellular transport;9.22855517048697e-36!GO:0031975;envelope;1.76022834416419e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.45017194723783e-33!GO:0006259;DNA metabolic process;2.05592196411419e-32!GO:0065003;macromolecular complex assembly;4.42755521128008e-32!GO:0007049;cell cycle;9.10073304204914e-30!GO:0006886;intracellular protein transport;7.36237526325964e-29!GO:0022607;cellular component assembly;1.12697613327338e-28!GO:0005654;nucleoplasm;2.81817493249348e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.97742783803793e-28!GO:0005681;spliceosome;9.19809829722335e-27!GO:0000166;nucleotide binding;4.43759886747231e-26!GO:0003676;nucleic acid binding;3.01902308984412e-25!GO:0000278;mitotic cell cycle;1.33673040654379e-24!GO:0005740;mitochondrial envelope;3.9646387266723e-24!GO:0051641;cellular localization;2.54894017703982e-23!GO:0051649;establishment of cellular localization;2.82376255985319e-23!GO:0022402;cell cycle process;3.42425496918186e-23!GO:0016462;pyrophosphatase activity;4.41545681907512e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;8.93766523883662e-23!GO:0044451;nucleoplasm part;9.04432985016245e-23!GO:0044445;cytosolic part;1.07941777556356e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;1.20536640024854e-22!GO:0031966;mitochondrial membrane;1.28978263983744e-22!GO:0017111;nucleoside-triphosphatase activity;3.04371265964797e-22!GO:0019866;organelle inner membrane;8.33050218466683e-22!GO:0006457;protein folding;2.08467650646901e-21!GO:0012505;endomembrane system;1.61498881557343e-20!GO:0005743;mitochondrial inner membrane;9.14426540215498e-20!GO:0015934;large ribosomal subunit;1.47748819522351e-19!GO:0006119;oxidative phosphorylation;2.18523788168167e-19!GO:0016070;RNA metabolic process;2.74278976920034e-19!GO:0015935;small ribosomal subunit;3.60531700383751e-19!GO:0032553;ribonucleotide binding;5.62301228747211e-19!GO:0032555;purine ribonucleotide binding;5.62301228747211e-19!GO:0000087;M phase of mitotic cell cycle;6.39421481286395e-19!GO:0022618;protein-RNA complex assembly;6.89281615796204e-19!GO:0005783;endoplasmic reticulum;9.28709480177571e-19!GO:0005730;nucleolus;1.31387050525549e-18!GO:0017076;purine nucleotide binding;1.32811230823381e-18!GO:0007067;mitosis;1.38936912669682e-18!GO:0005694;chromosome;1.94834909393644e-18!GO:0022403;cell cycle phase;4.20526827476327e-18!GO:0048770;pigment granule;5.99818730801625e-18!GO:0042470;melanosome;5.99818730801625e-18!GO:0031980;mitochondrial lumen;9.86513935499798e-18!GO:0005759;mitochondrial matrix;9.86513935499798e-18!GO:0016874;ligase activity;1.19538767553895e-17!GO:0006974;response to DNA damage stimulus;1.75965741620615e-17!GO:0044455;mitochondrial membrane part;7.03797534848495e-17!GO:0051301;cell division;1.34790845872987e-16!GO:0044427;chromosomal part;1.46628415677214e-16!GO:0005524;ATP binding;1.57950286842733e-16!GO:0008135;translation factor activity, nucleic acid binding;2.89560803057843e-16!GO:0005794;Golgi apparatus;3.82061677844247e-16!GO:0044432;endoplasmic reticulum part;4.23997239858598e-16!GO:0032559;adenyl ribonucleotide binding;5.25089978314183e-16!GO:0008134;transcription factor binding;5.29334597189455e-16!GO:0044265;cellular macromolecule catabolic process;6.87967066117666e-16!GO:0006512;ubiquitin cycle;9.58138467722611e-16!GO:0051276;chromosome organization and biogenesis;1.9410373627374e-15!GO:0030554;adenyl nucleotide binding;1.98819288324606e-15!GO:0042254;ribosome biogenesis and assembly;3.4065453228558e-15!GO:0000502;proteasome complex (sensu Eukaryota);4.32115148694976e-15!GO:0000279;M phase;5.10456751967088e-15!GO:0006605;protein targeting;6.46131899191521e-15!GO:0048193;Golgi vesicle transport;1.06217607522861e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.2671268561729e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.50031344013642e-14!GO:0043285;biopolymer catabolic process;1.70839457686127e-14!GO:0006281;DNA repair;1.97798279113078e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.24356319398939e-14!GO:0019941;modification-dependent protein catabolic process;2.28357185609678e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.28357185609678e-14!GO:0044257;cellular protein catabolic process;3.45089921315135e-14!GO:0051082;unfolded protein binding;3.50745009004388e-14!GO:0005761;mitochondrial ribosome;3.66683971608086e-14!GO:0000313;organellar ribosome;3.66683971608086e-14!GO:0009057;macromolecule catabolic process;5.59601459938877e-14!GO:0009719;response to endogenous stimulus;7.10916697548852e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.11091527886619e-14!GO:0005746;mitochondrial respiratory chain;9.13296998550126e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;9.37669129232941e-14!GO:0000375;RNA splicing, via transesterification reactions;9.37669129232941e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.37669129232941e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.28386034438188e-13!GO:0043412;biopolymer modification;2.45441592696847e-13!GO:0051186;cofactor metabolic process;2.85447930722939e-13!GO:0003743;translation initiation factor activity;7.90861178438553e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.03691797555658e-12!GO:0003954;NADH dehydrogenase activity;1.03691797555658e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.03691797555658e-12!GO:0044453;nuclear membrane part;1.20153766853358e-12!GO:0031965;nuclear membrane;1.40875990955199e-12!GO:0016887;ATPase activity;1.43354518452022e-12!GO:0030163;protein catabolic process;1.9248543233945e-12!GO:0006260;DNA replication;1.9886529023424e-12!GO:0005635;nuclear envelope;2.16837023273128e-12!GO:0044248;cellular catabolic process;4.52290141988604e-12!GO:0006325;establishment and/or maintenance of chromatin architecture;4.56544685231843e-12!GO:0042623;ATPase activity, coupled;5.68146627284199e-12!GO:0005793;ER-Golgi intermediate compartment;6.27453871526581e-12!GO:0006413;translational initiation;6.67755348126873e-12!GO:0051726;regulation of cell cycle;9.53580085524185e-12!GO:0000074;regulation of progression through cell cycle;1.0913406398964e-11!GO:0006464;protein modification process;1.17394838304224e-11!GO:0006323;DNA packaging;1.53116912461114e-11!GO:0016192;vesicle-mediated transport;1.69830197185964e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.94633066265823e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.19270684690141e-11!GO:0006913;nucleocytoplasmic transport;4.3346300071863e-11!GO:0042775;organelle ATP synthesis coupled electron transport;5.77865022166588e-11!GO:0042773;ATP synthesis coupled electron transport;5.77865022166588e-11!GO:0016604;nuclear body;6.37536520789244e-11!GO:0030964;NADH dehydrogenase complex (quinone);7.70935733265283e-11!GO:0045271;respiratory chain complex I;7.70935733265283e-11!GO:0005747;mitochondrial respiratory chain complex I;7.70935733265283e-11!GO:0009259;ribonucleotide metabolic process;9.63120071722486e-11!GO:0051169;nuclear transport;1.05709098529947e-10!GO:0006732;coenzyme metabolic process;1.24662324108469e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.41571971404667e-10!GO:0003712;transcription cofactor activity;1.50582594953486e-10!GO:0005789;endoplasmic reticulum membrane;1.53424201938293e-10!GO:0004386;helicase activity;1.86632520129179e-10!GO:0006366;transcription from RNA polymerase II promoter;2.60488690144124e-10!GO:0005643;nuclear pore;2.70619277006875e-10!GO:0006446;regulation of translational initiation;3.397389605409e-10!GO:0043687;post-translational protein modification;4.14735379045783e-10!GO:0006163;purine nucleotide metabolic process;4.66019672205889e-10!GO:0065004;protein-DNA complex assembly;6.50463578090477e-10!GO:0015630;microtubule cytoskeleton;6.8616495253928e-10!GO:0009150;purine ribonucleotide metabolic process;7.62995078549283e-10!GO:0006364;rRNA processing;7.98527643154411e-10!GO:0008026;ATP-dependent helicase activity;1.02610864771599e-09!GO:0009260;ribonucleotide biosynthetic process;1.66483812176477e-09!GO:0016072;rRNA metabolic process;1.69056255772597e-09!GO:0006399;tRNA metabolic process;1.81886513079456e-09!GO:0065002;intracellular protein transport across a membrane;2.08364183510514e-09!GO:0000785;chromatin;2.36971599324066e-09!GO:0008565;protein transporter activity;2.76398116103341e-09!GO:0048523;negative regulation of cellular process;2.78206074669591e-09!GO:0006333;chromatin assembly or disassembly;2.86540048676112e-09!GO:0006164;purine nucleotide biosynthetic process;2.99383119099554e-09!GO:0006403;RNA localization;3.19395028757228e-09!GO:0050657;nucleic acid transport;3.79475518057712e-09!GO:0051236;establishment of RNA localization;3.79475518057712e-09!GO:0050658;RNA transport;3.79475518057712e-09!GO:0006888;ER to Golgi vesicle-mediated transport;3.82196447531591e-09!GO:0008639;small protein conjugating enzyme activity;3.91727885954914e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.67774917997573e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.67774917997573e-09!GO:0009055;electron carrier activity;4.67774917997573e-09!GO:0019787;small conjugating protein ligase activity;4.98658354571831e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.68164095590135e-09!GO:0016607;nuclear speck;6.00128517527336e-09!GO:0009141;nucleoside triphosphate metabolic process;6.38139119664176e-09!GO:0009199;ribonucleoside triphosphate metabolic process;6.9006007141991e-09!GO:0004842;ubiquitin-protein ligase activity;7.25657344200175e-09!GO:0046930;pore complex;7.33985789973239e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.28024073594544e-09!GO:0004812;aminoacyl-tRNA ligase activity;8.28024073594544e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.28024073594544e-09!GO:0012501;programmed cell death;1.31815824237243e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.54282666724674e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.54282666724674e-08!GO:0043038;amino acid activation;1.67619636333529e-08!GO:0006418;tRNA aminoacylation for protein translation;1.67619636333529e-08!GO:0043039;tRNA aminoacylation;1.67619636333529e-08!GO:0030120;vesicle coat;1.83454401090245e-08!GO:0030662;coated vesicle membrane;1.83454401090245e-08!GO:0005788;endoplasmic reticulum lumen;2.00019251756199e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.59523360899763e-08!GO:0017038;protein import;2.65957042169465e-08!GO:0006915;apoptosis;2.70927596716386e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.9948619919129e-08!GO:0005819;spindle;4.26440734872147e-08!GO:0006334;nucleosome assembly;4.33305623829438e-08!GO:0009060;aerobic respiration;4.70835955380571e-08!GO:0006461;protein complex assembly;4.85041022787492e-08!GO:0043566;structure-specific DNA binding;5.25429295710947e-08!GO:0009142;nucleoside triphosphate biosynthetic process;5.7961344261024e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.7961344261024e-08!GO:0050794;regulation of cellular process;6.94042844117676e-08!GO:0044431;Golgi apparatus part;7.60824913354629e-08!GO:0016881;acid-amino acid ligase activity;8.0963820273339e-08!GO:0015986;ATP synthesis coupled proton transport;8.30025235153121e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.30025235153121e-08!GO:0045333;cellular respiration;8.58635172952224e-08!GO:0046034;ATP metabolic process;1.10290539262866e-07!GO:0003924;GTPase activity;1.11098720500635e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.32389420040375e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.32389420040375e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.32389420040375e-07!GO:0031497;chromatin assembly;1.34361118601354e-07!GO:0008219;cell death;1.47978885314938e-07!GO:0016265;death;1.47978885314938e-07!GO:0048519;negative regulation of biological process;1.72074450938259e-07!GO:0048475;coated membrane;1.81438830581722e-07!GO:0030117;membrane coat;1.81438830581722e-07!GO:0016740;transferase activity;2.06049108436503e-07!GO:0051028;mRNA transport;2.17023708782575e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.19193006306371e-07!GO:0031324;negative regulation of cellular metabolic process;2.62284955109997e-07!GO:0000775;chromosome, pericentric region;2.75812414049406e-07!GO:0003697;single-stranded DNA binding;3.20805959224283e-07!GO:0005667;transcription factor complex;3.49801003628101e-07!GO:0019829;cation-transporting ATPase activity;3.57837327341446e-07!GO:0006099;tricarboxylic acid cycle;5.17634228940273e-07!GO:0046356;acetyl-CoA catabolic process;5.17634228940273e-07!GO:0051246;regulation of protein metabolic process;5.53527897745252e-07!GO:0051329;interphase of mitotic cell cycle;6.0396826059809e-07!GO:0016568;chromatin modification;6.59356539422572e-07!GO:0016853;isomerase activity;8.12992135556709e-07!GO:0005813;centrosome;8.53981209961374e-07!GO:0006754;ATP biosynthetic process;8.62925440279692e-07!GO:0006753;nucleoside phosphate metabolic process;8.62925440279692e-07!GO:0032446;protein modification by small protein conjugation;8.84329282740515e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.84579171935622e-07!GO:0009109;coenzyme catabolic process;1.0602537847513e-06!GO:0005798;Golgi-associated vesicle;1.12585048833006e-06!GO:0007051;spindle organization and biogenesis;1.29699511064631e-06!GO:0016567;protein ubiquitination;1.31286314822559e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.46332097579813e-06!GO:0006793;phosphorus metabolic process;1.48982334607748e-06!GO:0006796;phosphate metabolic process;1.48982334607748e-06!GO:0051325;interphase;1.51960866252111e-06!GO:0006084;acetyl-CoA metabolic process;1.56742261177122e-06!GO:0009056;catabolic process;1.65030465405018e-06!GO:0051187;cofactor catabolic process;1.65386986995145e-06!GO:0005815;microtubule organizing center;1.674240840582e-06!GO:0009117;nucleotide metabolic process;1.72740134411835e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.77825344860828e-06!GO:0000245;spliceosome assembly;2.22357395655325e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.28019339240738e-06!GO:0051188;cofactor biosynthetic process;2.30348290154163e-06!GO:0006613;cotranslational protein targeting to membrane;3.15483563266495e-06!GO:0016310;phosphorylation;3.32740003576626e-06!GO:0000151;ubiquitin ligase complex;3.4938355577896e-06!GO:0007005;mitochondrion organization and biogenesis;4.11541636185011e-06!GO:0000075;cell cycle checkpoint;4.11541636185011e-06!GO:0003714;transcription corepressor activity;4.44281260764442e-06!GO:0005768;endosome;4.4841867234319e-06!GO:0016779;nucleotidyltransferase activity;5.4472319212443e-06!GO:0000139;Golgi membrane;5.48259823895233e-06!GO:0009892;negative regulation of metabolic process;6.11391363125698e-06!GO:0045259;proton-transporting ATP synthase complex;6.93134671143611e-06!GO:0051170;nuclear import;6.96952295705529e-06!GO:0007010;cytoskeleton organization and biogenesis;7.6475953644823e-06!GO:0016563;transcription activator activity;7.73531180281046e-06!GO:0006606;protein import into nucleus;8.20781227499776e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;8.36596794489659e-06!GO:0006261;DNA-dependent DNA replication;8.73038378382759e-06!GO:0006752;group transfer coenzyme metabolic process;9.82387031308734e-06!GO:0043067;regulation of programmed cell death;1.04447783224767e-05!GO:0045786;negative regulation of progression through cell cycle;1.14260995511675e-05!GO:0016859;cis-trans isomerase activity;1.21331657280608e-05!GO:0042981;regulation of apoptosis;1.26394528884152e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.29076735119441e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.29645953859091e-05!GO:0016564;transcription repressor activity;1.78563775458084e-05!GO:0016491;oxidoreductase activity;1.8419620359703e-05!GO:0008361;regulation of cell size;1.94614819166004e-05!GO:0005525;GTP binding;2.05928286967395e-05!GO:0043623;cellular protein complex assembly;2.1014031408602e-05!GO:0031252;leading edge;2.21748995107717e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.30442379837178e-05!GO:0016049;cell growth;2.30442379837178e-05!GO:0030867;rough endoplasmic reticulum membrane;2.40135022205143e-05!GO:0005762;mitochondrial large ribosomal subunit;2.40135022205143e-05!GO:0000315;organellar large ribosomal subunit;2.40135022205143e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.44909430990278e-05!GO:0016787;hydrolase activity;2.58631809582007e-05!GO:0003724;RNA helicase activity;2.69502652028159e-05!GO:0050789;regulation of biological process;2.75007682028497e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.77460601447183e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.77529231886394e-05!GO:0003899;DNA-directed RNA polymerase activity;2.9357204484387e-05!GO:0031988;membrane-bound vesicle;2.97683006027281e-05!GO:0009108;coenzyme biosynthetic process;3.8263796493414e-05!GO:0043069;negative regulation of programmed cell death;3.9455798370474e-05!GO:0043021;ribonucleoprotein binding;3.96321320795523e-05!GO:0019222;regulation of metabolic process;4.36863393683206e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.61490563661437e-05!GO:0019843;rRNA binding;4.86226737940782e-05!GO:0044440;endosomal part;5.04775980018702e-05!GO:0010008;endosome membrane;5.04775980018702e-05!GO:0019867;outer membrane;5.30358856922036e-05!GO:0019899;enzyme binding;5.52891485752211e-05!GO:0051789;response to protein stimulus;6.57434518907476e-05!GO:0006986;response to unfolded protein;6.57434518907476e-05!GO:0031968;organelle outer membrane;7.31453792193294e-05!GO:0003713;transcription coactivator activity;7.37499113819421e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.52339254506173e-05!GO:0045454;cell redox homeostasis;7.56425429587516e-05!GO:0005657;replication fork;7.70444398516636e-05!GO:0016481;negative regulation of transcription;8.13472597975287e-05!GO:0008094;DNA-dependent ATPase activity;8.3422336587295e-05!GO:0043066;negative regulation of apoptosis;9.19099627735081e-05!GO:0005770;late endosome;9.5981510683033e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000106781944659867!GO:0001558;regulation of cell growth;0.00010865388393227!GO:0006916;anti-apoptosis;0.000109140649447541!GO:0004298;threonine endopeptidase activity;0.0001124819912561!GO:0051427;hormone receptor binding;0.00014763194191397!GO:0032561;guanyl ribonucleotide binding;0.000152406774451494!GO:0019001;guanyl nucleotide binding;0.000152406774451494!GO:0030133;transport vesicle;0.000153961946144664!GO:0008654;phospholipid biosynthetic process;0.000153961946144664!GO:0005048;signal sequence binding;0.000162999407076043!GO:0031982;vesicle;0.000163210649794281!GO:0015980;energy derivation by oxidation of organic compounds;0.000182045822268508!GO:0031410;cytoplasmic vesicle;0.000184444177949385!GO:0016363;nuclear matrix;0.000186217664548249!GO:0030663;COPI coated vesicle membrane;0.000202336646164583!GO:0030126;COPI vesicle coat;0.000202336646164583!GO:0051168;nuclear export;0.000217133560654804!GO:0000776;kinetochore;0.000222441209004859!GO:0003682;chromatin binding;0.000227322531667838!GO:0033116;ER-Golgi intermediate compartment membrane;0.000241248310944329!GO:0005741;mitochondrial outer membrane;0.000249276298574936!GO:0030036;actin cytoskeleton organization and biogenesis;0.000251130605552631!GO:0003690;double-stranded DNA binding;0.000256293287675613!GO:0006612;protein targeting to membrane;0.000268976540752134!GO:0005885;Arp2/3 protein complex;0.00028543563876008!GO:0006302;double-strand break repair;0.000287584592923364!GO:0035257;nuclear hormone receptor binding;0.000298176516136903!GO:0008250;oligosaccharyl transferase complex;0.000321980921322012!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000345844154056463!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000352491605661185!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000368831126305601!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000368831126305601!GO:0000314;organellar small ribosomal subunit;0.000368831126305601!GO:0005763;mitochondrial small ribosomal subunit;0.000368831126305601!GO:0006091;generation of precursor metabolites and energy;0.000398094526321813!GO:0007059;chromosome segregation;0.000398094526321813!GO:0005905;coated pit;0.000434711004369448!GO:0004576;oligosaccharyl transferase activity;0.000458012504843391!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000478857253361732!GO:0030137;COPI-coated vesicle;0.000535958215080128!GO:0007093;mitotic cell cycle checkpoint;0.000546357404352261!GO:0048522;positive regulation of cellular process;0.000580280498789621!GO:0003678;DNA helicase activity;0.000597456861073753!GO:0005874;microtubule;0.000603886992458302!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00065387452869695!GO:0007052;mitotic spindle organization and biogenesis;0.00068278994653401!GO:0000082;G1/S transition of mitotic cell cycle;0.000709068889620368!GO:0044262;cellular carbohydrate metabolic process;0.000713690232034995!GO:0000786;nucleosome;0.000719492265255057!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000727919087063186!GO:0008186;RNA-dependent ATPase activity;0.000732176861714544!GO:0044452;nucleolar part;0.000741581558460579!GO:0000059;protein import into nucleus, docking;0.000775333936935829!GO:0006626;protein targeting to mitochondrion;0.000783252651064037!GO:0003729;mRNA binding;0.00079383034061385!GO:0018196;peptidyl-asparagine modification;0.000831206471530552!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000831206471530552!GO:0007088;regulation of mitosis;0.000839619392102512!GO:0051052;regulation of DNA metabolic process;0.00087868391473362!GO:0009165;nucleotide biosynthetic process;0.000890252847407484!GO:0048500;signal recognition particle;0.000902896164862603!GO:0051920;peroxiredoxin activity;0.000984298795221729!GO:0005769;early endosome;0.001004408997167!GO:0008092;cytoskeletal protein binding;0.00102310343418283!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00103858734001568!GO:0006383;transcription from RNA polymerase III promoter;0.00105277979361548!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00111187315635491!GO:0043681;protein import into mitochondrion;0.00111469421162498!GO:0051252;regulation of RNA metabolic process;0.00114503002458428!GO:0005773;vacuole;0.00120393617534627!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00121253988233575!GO:0003684;damaged DNA binding;0.00121957572252677!GO:0006310;DNA recombination;0.00125895648864358!GO:0005791;rough endoplasmic reticulum;0.0015035508177123!GO:0030029;actin filament-based process;0.00155305574357003!GO:0007050;cell cycle arrest;0.00161016376233866!GO:0030658;transport vesicle membrane;0.00183118152737498!GO:0007006;mitochondrial membrane organization and biogenesis;0.00188872668779284!GO:0004004;ATP-dependent RNA helicase activity;0.00191226200802643!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00197634074320217!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00197634074320217!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00197634074320217!GO:0031072;heat shock protein binding;0.00200015292887479!GO:0030134;ER to Golgi transport vesicle;0.0020070255964219!GO:0065009;regulation of a molecular function;0.00214921440404508!GO:0005684;U2-dependent spliceosome;0.00216740945460132!GO:0008312;7S RNA binding;0.00223349820331882!GO:0006891;intra-Golgi vesicle-mediated transport;0.00225565048996889!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00228215706410252!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00234614447124027!GO:0045047;protein targeting to ER;0.00234614447124027!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00234641986373609!GO:0015399;primary active transmembrane transporter activity;0.00234641986373609!GO:0051087;chaperone binding;0.00261725422266536!GO:0007017;microtubule-based process;0.00273213312428989!GO:0006352;transcription initiation;0.00282704536535457!GO:0006402;mRNA catabolic process;0.00292818738707798!GO:0040008;regulation of growth;0.00294174017667944!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00295320133347454!GO:0031323;regulation of cellular metabolic process;0.00295763588519978!GO:0015631;tubulin binding;0.00296150485125357!GO:0030127;COPII vesicle coat;0.00306055141612851!GO:0012507;ER to Golgi transport vesicle membrane;0.00306055141612851!GO:0007243;protein kinase cascade;0.00306938289804453!GO:0004527;exonuclease activity;0.00308857577606732!GO:0030521;androgen receptor signaling pathway;0.00320057111189834!GO:0046474;glycerophospholipid biosynthetic process;0.00320425868705811!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00349211316555557!GO:0030880;RNA polymerase complex;0.00351698362436204!GO:0006839;mitochondrial transport;0.00363484892416272!GO:0030132;clathrin coat of coated pit;0.00374437053046195!GO:0008022;protein C-terminus binding;0.00374437053046195!GO:0031543;peptidyl-proline dioxygenase activity;0.00374437053046195!GO:0006414;translational elongation;0.00392756387959273!GO:0048471;perinuclear region of cytoplasm;0.00394856753431096!GO:0008180;signalosome;0.004055053188045!GO:0006401;RNA catabolic process;0.00420506875879403!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00439981803994238!GO:0000910;cytokinesis;0.00447427555074882!GO:0005876;spindle microtubule;0.00451919925556667!GO:0008168;methyltransferase activity;0.00468615057145773!GO:0031124;mRNA 3'-end processing;0.00471056111580609!GO:0004674;protein serine/threonine kinase activity;0.00495651289029221!GO:0030660;Golgi-associated vesicle membrane;0.00501352130585771!GO:0006595;polyamine metabolic process;0.00505844801242616!GO:0005637;nuclear inner membrane;0.00509248562188882!GO:0042802;identical protein binding;0.00513190540265316!GO:0016044;membrane organization and biogenesis;0.00519231957212505!GO:0043488;regulation of mRNA stability;0.00522713776343532!GO:0043487;regulation of RNA stability;0.00522713776343532!GO:0016741;transferase activity, transferring one-carbon groups;0.00539479141224356!GO:0000323;lytic vacuole;0.0056641985283753!GO:0005764;lysosome;0.0056641985283753!GO:0000339;RNA cap binding;0.00567291914814943!GO:0005869;dynactin complex;0.0057809027255355!GO:0051128;regulation of cellular component organization and biogenesis;0.00588470195450106!GO:0032508;DNA duplex unwinding;0.00588470195450106!GO:0032392;DNA geometric change;0.00588470195450106!GO:0017166;vinculin binding;0.00612687871226404!GO:0045892;negative regulation of transcription, DNA-dependent;0.00629775185095946!GO:0000049;tRNA binding;0.0063152554735121!GO:0016408;C-acyltransferase activity;0.00648878831364189!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00649988078418692!GO:0006275;regulation of DNA replication;0.00649988078418692!GO:0030118;clathrin coat;0.00697623258833215!GO:0045941;positive regulation of transcription;0.00700891772011563!GO:0030176;integral to endoplasmic reticulum membrane;0.00700891772011563!GO:0019798;procollagen-proline dioxygenase activity;0.00700891772011563!GO:0008033;tRNA processing;0.00720306799121884!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00723812223371171!GO:0000428;DNA-directed RNA polymerase complex;0.00723812223371171!GO:0000922;spindle pole;0.00743211178346031!GO:0065007;biological regulation;0.00748203839977251!GO:0045893;positive regulation of transcription, DNA-dependent;0.00748203839977251!GO:0043022;ribosome binding;0.00748572334964068!GO:0016251;general RNA polymerase II transcription factor activity;0.00756385409297666!GO:0008139;nuclear localization sequence binding;0.00759782048897703!GO:0008047;enzyme activator activity;0.00794976531329661!GO:0006405;RNA export from nucleus;0.00794976531329661!GO:0005669;transcription factor TFIID complex;0.008153446188264!GO:0031418;L-ascorbic acid binding;0.00819437901612669!GO:0046489;phosphoinositide biosynthetic process;0.00820095673467054!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0084627750679469!GO:0003702;RNA polymerase II transcription factor activity;0.0084627750679469!GO:0003711;transcription elongation regulator activity;0.00847598022726323!GO:0004003;ATP-dependent DNA helicase activity;0.00874264396055432!GO:0006350;transcription;0.00876962178224759!GO:0006268;DNA unwinding during replication;0.00886496758807674!GO:0016126;sterol biosynthetic process;0.00909667255676604!GO:0043284;biopolymer biosynthetic process;0.00914213374657805!GO:0005862;muscle thin filament tropomyosin;0.00941172579637425!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0095208101914828!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0095208101914828!GO:0000792;heterochromatin;0.0095208101914828!GO:0035258;steroid hormone receptor binding;0.00957640750187116!GO:0043624;cellular protein complex disassembly;0.00961626310772603!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00963690618635464!GO:0030027;lamellipodium;0.0101797188749717!GO:0006509;membrane protein ectodomain proteolysis;0.0104611498343863!GO:0033619;membrane protein proteolysis;0.0104611498343863!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0104942786247617!GO:0016272;prefoldin complex;0.0105731089558747!GO:0005832;chaperonin-containing T-complex;0.011316603952367!GO:0015992;proton transport;0.0113343707546751!GO:0000228;nuclear chromosome;0.0114774762434142!GO:0045045;secretory pathway;0.0114774762434142!GO:0019752;carboxylic acid metabolic process;0.0115772104228755!GO:0006818;hydrogen transport;0.0116182078442646!GO:0048487;beta-tubulin binding;0.0119318503895017!GO:0006007;glucose catabolic process;0.0120802833336499!GO:0006082;organic acid metabolic process;0.0125295512655525!GO:0016197;endosome transport;0.012575803592757!GO:0006892;post-Golgi vesicle-mediated transport;0.0129405968555394!GO:0043492;ATPase activity, coupled to movement of substances;0.0133329329243715!GO:0006520;amino acid metabolic process;0.0138203726983992!GO:0031625;ubiquitin protein ligase binding;0.0138278806301973!GO:0050681;androgen receptor binding;0.0138437408950194!GO:0006378;mRNA polyadenylation;0.0142991979517436!GO:0022408;negative regulation of cell-cell adhesion;0.0144443893289629!GO:0000287;magnesium ion binding;0.014483183471267!GO:0051287;NAD binding;0.0145940895436429!GO:0006740;NADPH regeneration;0.0145940895436429!GO:0006098;pentose-phosphate shunt;0.0145940895436429!GO:0001726;ruffle;0.0147737755698838!GO:0046483;heterocycle metabolic process;0.0155303011582925!GO:0000096;sulfur amino acid metabolic process;0.01560478691658!GO:0032984;macromolecular complex disassembly;0.01560478691658!GO:0031123;RNA 3'-end processing;0.0156101120985967!GO:0022890;inorganic cation transmembrane transporter activity;0.015992644943649!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0160154552480953!GO:0007021;tubulin folding;0.0160154552480953!GO:0003746;translation elongation factor activity;0.0160903345475259!GO:0051101;regulation of DNA binding;0.0163218641657988!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.016909529916376!GO:0030496;midbody;0.0174190298510357!GO:0045936;negative regulation of phosphate metabolic process;0.0174523481636139!GO:0016584;nucleosome positioning;0.01769823348837!GO:0030659;cytoplasmic vesicle membrane;0.0188032368370717!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0188730004590617!GO:0009303;rRNA transcription;0.0188730004590617!GO:0031529;ruffle organization and biogenesis;0.019297911572804!GO:0006289;nucleotide-excision repair;0.0193908201094378!GO:0004518;nuclease activity;0.0194064812194986!GO:0006220;pyrimidine nucleotide metabolic process;0.0194875196213248!GO:0006611;protein export from nucleus;0.0196605471599541!GO:0001952;regulation of cell-matrix adhesion;0.0213585788316617!GO:0032200;telomere organization and biogenesis;0.0219408788794408!GO:0000723;telomere maintenance;0.0219408788794408!GO:0045792;negative regulation of cell size;0.0219786441779918!GO:0030041;actin filament polymerization;0.0219786441779918!GO:0030125;clathrin vesicle coat;0.0219786441779918!GO:0030665;clathrin coated vesicle membrane;0.0219786441779918!GO:0006338;chromatin remodeling;0.0221392406656454!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0223014103190378!GO:0000819;sister chromatid segregation;0.0223014103190378!GO:0033673;negative regulation of kinase activity;0.0224609119171299!GO:0006469;negative regulation of protein kinase activity;0.0224609119171299!GO:0006950;response to stress;0.0226097246061266!GO:0007569;cell aging;0.0226097246061266!GO:0042770;DNA damage response, signal transduction;0.0229670362729351!GO:0016301;kinase activity;0.0229670362729351!GO:0006376;mRNA splice site selection;0.0230432320593148!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0230432320593148!GO:0022415;viral reproductive process;0.0232776999767531!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0234719325810797!GO:0009112;nucleobase metabolic process;0.0237567551526444!GO:0030833;regulation of actin filament polymerization;0.0242210881033235!GO:0030032;lamellipodium biogenesis;0.0243739260650905!GO:0048518;positive regulation of biological process;0.0247804174597859!GO:0043241;protein complex disassembly;0.0248955878269227!GO:0009116;nucleoside metabolic process;0.0251261148092831!GO:0007004;telomere maintenance via telomerase;0.025149515401394!GO:0005801;cis-Golgi network;0.025149515401394!GO:0007346;regulation of progression through mitotic cell cycle;0.0253716002144281!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.025814297646245!GO:0051098;regulation of binding;0.025928927984519!GO:0030119;AP-type membrane coat adaptor complex;0.025928927984519!GO:0006984;ER-nuclear signaling pathway;0.0260931219371472!GO:0048468;cell development;0.0263730375621739!GO:0006607;NLS-bearing substrate import into nucleus;0.0263862210242057!GO:0000070;mitotic sister chromatid segregation;0.0264771108877727!GO:0030308;negative regulation of cell growth;0.0265544520796538!GO:0000178;exosome (RNase complex);0.0268607706510192!GO:0000209;protein polyubiquitination;0.0269675875067373!GO:0003756;protein disulfide isomerase activity;0.0271905148314242!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0271905148314242!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0272803830726398!GO:0009225;nucleotide-sugar metabolic process;0.027620340096615!GO:0031570;DNA integrity checkpoint;0.0277140578958001!GO:0050790;regulation of catalytic activity;0.0277599506069065!GO:0008154;actin polymerization and/or depolymerization;0.0277599506069065!GO:0046467;membrane lipid biosynthetic process;0.0278677422536055!GO:0048146;positive regulation of fibroblast proliferation;0.0278742106650203!GO:0051348;negative regulation of transferase activity;0.0279683232651378!GO:0043433;negative regulation of transcription factor activity;0.0279727498021571!GO:0007264;small GTPase mediated signal transduction;0.0279727498021571!GO:0000781;chromosome, telomeric region;0.0280360073088328!GO:0006144;purine base metabolic process;0.0288214822259155!GO:0001527;microfibril;0.0288993134027388!GO:0048144;fibroblast proliferation;0.0289140166024761!GO:0048145;regulation of fibroblast proliferation;0.0289140166024761!GO:0010468;regulation of gene expression;0.0289387887414721!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0293947020041767!GO:0040029;regulation of gene expression, epigenetic;0.0296566179835121!GO:0042393;histone binding;0.0296891060632509!GO:0031901;early endosome membrane;0.0306434930775714!GO:0004177;aminopeptidase activity;0.031020100131724!GO:0030508;thiol-disulfide exchange intermediate activity;0.0314317966206234!GO:0008652;amino acid biosynthetic process;0.0317071256741229!GO:0001953;negative regulation of cell-matrix adhesion;0.0318761966537762!GO:0007030;Golgi organization and biogenesis;0.0320450299933392!GO:0005938;cell cortex;0.0321661558146012!GO:0006497;protein amino acid lipidation;0.0324659015310556!GO:0005856;cytoskeleton;0.0326392464236178!GO:0031371;ubiquitin conjugating enzyme complex;0.0340113947905543!GO:0042326;negative regulation of phosphorylation;0.0344950555321995!GO:0043596;nuclear replication fork;0.0345285663618267!GO:0009451;RNA modification;0.0352794741744175!GO:0043130;ubiquitin binding;0.0355872003059249!GO:0032182;small conjugating protein binding;0.0355872003059249!GO:0006695;cholesterol biosynthetic process;0.0356290221689893!GO:0006650;glycerophospholipid metabolic process;0.0361650153811716!GO:0005096;GTPase activator activity;0.0366578945797998!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0367567035075016!GO:0022411;cellular component disassembly;0.037030839170533!GO:0005784;translocon complex;0.0374822295738746!GO:0044433;cytoplasmic vesicle part;0.0376808547669546!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0377650592035998!GO:0033043;regulation of organelle organization and biogenesis;0.0377650592035998!GO:0008629;induction of apoptosis by intracellular signals;0.0377650592035998!GO:0042585;germinal vesicle;0.0382788026453185!GO:0008538;proteasome activator activity;0.0384164368328119!GO:0030145;manganese ion binding;0.0393529316358018!GO:0035267;NuA4 histone acetyltransferase complex;0.0396781775698364!GO:0030433;ER-associated protein catabolic process;0.0402269377398146!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0402269377398146!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0402269377398146!GO:0015002;heme-copper terminal oxidase activity;0.0402269377398146!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0402269377398146!GO:0004129;cytochrome-c oxidase activity;0.0402269377398146!GO:0030518;steroid hormone receptor signaling pathway;0.0404662591483429!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0406244521779497!GO:0030131;clathrin adaptor complex;0.0406244521779497!GO:0047485;protein N-terminus binding;0.040673875882096!GO:0031577;spindle checkpoint;0.0412253655145441!GO:0000086;G2/M transition of mitotic cell cycle;0.0416554599096391!GO:0017134;fibroblast growth factor binding;0.0429265601811187!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0431561951067378!GO:0000077;DNA damage checkpoint;0.0433487859222754!GO:0008632;apoptotic program;0.04405058706357!GO:0016407;acetyltransferase activity;0.04405058706357!GO:0007034;vacuolar transport;0.0442877759406808!GO:0019206;nucleoside kinase activity;0.0448205445802653!GO:0008283;cell proliferation;0.0454700925768886!GO:0000726;non-recombinational repair;0.0454700925768886!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0464569491181239!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0475668425033224!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0476612073205559!GO:0005680;anaphase-promoting complex;0.0478348547084351!GO:0003779;actin binding;0.0478348547084351!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0479283276190471!GO:0000152;nuclear ubiquitin ligase complex;0.0482364034485736!GO:0043189;H4/H2A histone acetyltransferase complex;0.0482364034485736!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0482364034485736!GO:0032153;cell division site;0.0483900728543439!GO:0032155;cell division site part;0.0483900728543439!GO:0008610;lipid biosynthetic process;0.0486046990212761!GO:0051338;regulation of transferase activity;0.0497009686418685!GO:0006541;glutamine metabolic process;0.0499908150417783
|sample_id=11354
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=bone
|top_motifs=HOX{A5,B5}:1.57357646352;ZNF384:1.40323111245;GATA4:1.37143765574;NR3C1:1.36433550473;NKX3-1:1.29420013109;CDC5L:1.19804204465;PAX8:1.18177910888;NKX2-2,8:1.13471725677;MYBL2:1.09164994446;SRF:1.05828047442;SOX17:1.05532223004;ZIC1..3:1.05117596099;PRDM1:1.03002603268;HAND1,2:1.01554200788;PDX1:1.01220806956;HMGA1,2:1.01088398992;EN1,2:1.00481016446;TAL1_TCF{3,4,12}:0.991424594775;HOX{A4,D4}:0.974945041709;HSF1,2:0.966062618041;KLF4:0.934477180158;ALX4:0.931476372306;MYB:0.922991183293;EVI1:0.873393098869;UFEwm:0.774943729353;GFI1:0.772298861997;TEAD1:0.764295753506;MAFB:0.763699133053;LHX3,4:0.762802254639;ATF6:0.762451790672;GFI1B:0.729425831108;SMAD1..7,9:0.721345257144;E2F1..5:0.706337778739;XBP1:0.687353147038;FOXL1:0.661648085778;GZF1:0.65734234457;POU3F1..4:0.649607364718;PRRX1,2:0.618559353334;MZF1:0.61143377197;TFDP1:0.609867807385;HMX1:0.60791986377;NFATC1..3:0.601699426944;NFE2L1:0.571518247869;SPZ1:0.57121747482;HES1:0.567167246066;MTE{core}:0.564850396329;GTF2A1,2:0.555577079472;POU5F1:0.513921947999;NKX2-3_NKX2-5:0.471818399923;GTF2I:0.44451335782;ZBTB6:0.440224296812;TBX4,5:0.431765164502;SOX2:0.424074395087;HBP1_HMGB_SSRP1_UBTF:0.41694735769;IKZF1:0.415471619529;AHR_ARNT_ARNT2:0.401370643811;GLI1..3:0.396803431744;CRX:0.392965967758;LEF1_TCF7_TCF7L1,2:0.350848075209;NR6A1:0.329106233284;NR1H4:0.302326070442;FOXD3:0.293529874189;ZNF143:0.28259279048;ZNF238:0.27268886642;RXR{A,B,G}:0.260749599487;HIF1A:0.246091098922;NFIX:0.244645753175;FOXA2:0.237121947732;ONECUT1,2:0.231053393252;NFE2L2:0.225892977384;BACH2:0.218820814472;NRF1:0.216890826649;ARID5B:0.212822533619;TFAP4:0.208845976896;NFY{A,B,C}:0.208467577921;PAX3,7:0.191476583341;MAZ:0.157043529896;T:0.148944403173;ZNF423:0.133810108548;TOPORS:0.129509161816;FOSL2:0.127889270638;JUN:0.110445182768;PAX4:0.107767529827;NKX3-2:0.090671028664;TLX1..3_NFIC{dimer}:0.0852392794943;TFCP2:0.0424754893953;GCM1,2:0.0301778693478;POU6F1:0.0275263775058;RREB1:0.0198106788779;ZBTB16:0.0170667007123;FOS_FOS{B,L1}_JUN{B,D}:0.00539175727784;RFX1:0.00306697348636;ESR1:0.00244251752122;AIRE:-0.000517763699132;MEF2{A,B,C,D}:-0.0259458324227;CDX1,2,4:-0.027143070149;BREu{core}:-0.0286445195762;RUNX1..3:-0.0376874626255;ADNP_IRX_SIX_ZHX:-0.041309480623;OCT4_SOX2{dimer}:-0.0435575803637;PAX5:-0.0488932644724;SOX{8,9,10}:-0.0522022704516;ZNF148:-0.0664842623683;CEBPA,B_DDIT3:-0.0723895188365;HNF1A:-0.0850354013143;ELK1,4_GABP{A,B1}:-0.112507604461;XCPE1{core}:-0.113086317859;HLF:-0.116905221211;EBF1:-0.122773184778;TEF:-0.134959630482;NFE2:-0.140422951998;POU1F1:-0.149765781924;HOXA9_MEIS1:-0.152538590545;NHLH1,2:-0.154278659311;NKX6-1,2:-0.154462881116;TGIF1:-0.156771949684;TBP:-0.158555810633;DBP:-0.16755871067;FOXM1:-0.167755736511;HIC1:-0.176705105726;TP53:-0.184498233884;PATZ1:-0.184805179491;VSX1,2:-0.200183113103;ZFP161:-0.207566993877;FOXP3:-0.211643662068;NR5A1,2:-0.246947539449;POU2F1..3:-0.249076472335;PPARG:-0.250556559557;MED-1{core}:-0.252645255048;IKZF2:-0.256850567904;YY1:-0.265310194031;MYFfamily:-0.267176624744;STAT2,4,6:-0.277438291482;NFIL3:-0.282980762737;REST:-0.285358258625;GATA6:-0.301860669177;TFAP2{A,C}:-0.311634426553;DMAP1_NCOR{1,2}_SMARC:-0.312555077539;EP300:-0.325544212616;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.332750251601;FOX{I1,J2}:-0.33306970884;PBX1:-0.340544082993;PAX2:-0.345472043127;NFKB1_REL_RELA:-0.345603237097;BPTF:-0.361586739441;CUX2:-0.375620876034;NANOG{mouse}:-0.376233602373;bHLH_family:-0.37926773379;STAT1,3:-0.388538095586;TFAP2B:-0.390326320845;ELF1,2,4:-0.403672989599;HNF4A_NR2F1,2:-0.404678364551;EGR1..3:-0.409077743268;LMO2:-0.409652055874;STAT5{A,B}:-0.413162817005;MTF1:-0.417305307615;NANOG:-0.429679413899;FOXN1:-0.443809743653;SNAI1..3:-0.467366443855;FOXO1,3,4:-0.495372671769;SPI1:-0.504400598731;ETS1,2:-0.526778120738;FOXQ1:-0.548121348172;IRF1,2:-0.548834179858;SPIB:-0.559414895285;FOX{F1,F2,J1}:-0.562827355688;AR:-0.573451417501;CREB1:-0.577606551071;RFX2..5_RFXANK_RFXAP:-0.581796717948;ATF5_CREB3:-0.605166113185;PAX6:-0.646452833602;RXRA_VDR{dimer}:-0.654304321239;ESRRA:-0.654791159117;FOX{D1,D2}:-0.665365481814;ATF4:-0.675084773084;FOXP1:-0.679254430294;SOX5:-0.6794423873;PAX1,9:-0.682449111905;ZEB1:-0.709251272934;IRF7:-0.728727209503;PITX1..3:-0.730638602868;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.807323246513;MYOD1:-0.842090079295;NKX2-1,4:-0.844103112199;HOX{A6,A7,B6,B7}:-0.84672801216;SREBF1,2:-0.88626022506;RBPJ:-0.886739785481;SP1:-0.955849768793;ATF2:-1.04570434111;RORA:-1.0934932745;ALX1:-1.19486245669;TLX2:-2.06264439268
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11354-117H4;search_select_hide=table117:FF:11354-117H4
}}
}}

Latest revision as of 17:54, 4 June 2020

Name:Osteoblast, donor2
Species:Human (Homo sapiens)
Library ID:CNhs11385
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebone
dev stage22 weeks old fetus
sexmale
ageembryo 22week
cell typeosteoblast
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number1428
catalog numberCA406-R10f
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005116
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11385 CAGE DRX008393 DRR009265
Accession ID Hg19

Library idBAMCTSS
CNhs11385 DRZ000690 DRZ002075
Accession ID Hg38

Library idBAMCTSS
CNhs11385 DRZ012040 DRZ013425
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005116
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10004.CGTACG sRNA-Seq DRX037052 DRR041418
Accession ID Hg19

Library idBAMCTSS
SRhi10004.CGTACG DRZ007060


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.415
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.221
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-1.155522e-4
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0964
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0241
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.367
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.227
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.217
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.206
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.00323
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0613
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.387
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.221
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.636
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature-0.0333
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.388
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.221
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.563
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.563
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11385

Jaspar motifP-value
MA0002.20.254
MA0003.10.269
MA0004.10.155
MA0006.10.394
MA0007.10.609
MA0009.10.993
MA0014.10.0866
MA0017.10.597
MA0018.26.57572e-5
MA0019.10.659
MA0024.10.0493
MA0025.10.0044
MA0027.10.501
MA0028.10.0363
MA0029.10.506
MA0030.10.0123
MA0031.10.0149
MA0035.20.121
MA0038.10.758
MA0039.20.00312
MA0040.10.729
MA0041.10.608
MA0042.10.482
MA0043.13.68888e-4
MA0046.10.797
MA0047.20.0543
MA0048.10.00251
MA0050.13.37959e-7
MA0051.12.65952e-6
MA0052.10.261
MA0055.10.964
MA0057.10.794
MA0058.10.076
MA0059.10.181
MA0060.10.811
MA0061.10.459
MA0062.23.42887e-7
MA0065.20.174
MA0066.10.414
MA0067.10.00522
MA0068.10.0198
MA0069.10.0931
MA0070.10.636
MA0071.10.804
MA0072.10.983
MA0073.10.845
MA0074.10.845
MA0076.10.00293
MA0077.10.908
MA0078.10.603
MA0079.20.231
MA0080.24.17549e-9
MA0081.10.00189
MA0083.14.00787e-5
MA0084.10.32
MA0087.10.556
MA0088.10.46
MA0090.10.00345
MA0091.10.255
MA0092.10.436
MA0093.10.175
MA0099.20.265
MA0100.10.0427
MA0101.10.00283
MA0102.20.00645
MA0103.10.00337
MA0104.20.886
MA0105.10.0348
MA0106.10.506
MA0107.10.00169
MA0108.20.54
MA0111.10.922
MA0112.20.128
MA0113.10.299
MA0114.10.153
MA0115.10.553
MA0116.10.0631
MA0117.10.943
MA0119.10.335
MA0122.10.0913
MA0124.10.874
MA0125.10.639
MA0131.10.814
MA0135.10.375
MA0136.11.99854e-6
MA0137.20.173
MA0138.20.844
MA0139.10.961
MA0140.10.868
MA0141.10.17
MA0142.10.62
MA0143.10.576
MA0144.10.288
MA0145.10.943
MA0146.10.246
MA0147.10.433
MA0148.10.383
MA0149.10.872
MA0150.10.181
MA0152.10.0168
MA0153.10.753
MA0154.10.246
MA0155.10.741
MA0156.16.52911e-6
MA0157.10.199
MA0159.10.619
MA0160.10.0714
MA0162.10.764
MA0163.10.143
MA0164.10.488
MA0258.10.636
MA0259.10.137



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11385

Novel motifP-value
10.456
100.528
1000.55
1010.778
1020.245
1030.156
1040.89
1050.397
1060.399
1070.106
1080.981
1090.9
110.0723
1100.515
1110.557
1120.592
1130.0346
1140.359
1150.376
1160.272
1170.416
1180.272
1190.685
120.408
1200.514
1210.823
1220.141
1230.0057
1240.907
1250.239
1260.286
1270.792
1280.741
1290.964
130.404
1300.342
1310.315
1320.868
1330.234
1340.0322
1350.954
1360.0927
1370.583
1380.137
1390.562
140.3
1400.92
1410.545
1420.709
1430.126
1440.715
1450.928
1460.477
1470.0749
1480.266
1490.276
150.85
1500.566
1510.368
1520.447
1530.85
1540.52
1557.50796e-4
1560.715
1570.0142
1580.0267
1590.14
160.0596
1600.322
1610.111
1620.0465
1630.521
1640.485
1650.474
1660.0106
1670.899
1680.702
1690.627
170.816
180.161
190.044
20.56
200.122
210.254
220.655
230.122
240.678
250.738
260.875
270.853
280.217
290.714
30.337
300.518
310.8
323.48657e-6
330.934
340.773
350.601
360.303
370.49
380.509
390.273
40.235
400.0538
410.878
420.528
430.945
440.299
450.363
460.137
470.228
480.303
490.757
50.51
500.936
510.79
520.563
530.224
540.446
550.406
560.87
570.334
580.873
590.229
60.549
600.701
610.728
620.312
630.513
640.887
650.808
660.14
670.983
680.424
690.498
70.64
700.232
710.294
720.432
730.618
740.158
750.72
760.536
770.241
780.434
790.107
80.257
800.808
810.398
820.809
830.17
840.338
850.532
860.994
870.998
880.763
890.0464
90.529
900.044
910.314
920.487
930.168
940.425
950.161
960.583
970.696
980.287
990.0434



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11385


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000055 (non-terminally differentiated cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000062 (osteoblast)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000127 (human osteoblast-Sciencell sample)
0000128 (human osteoblast-Cell applications sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000335 (mesenchyme condensation cell)

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