FF:11376-118A8: Difference between revisions

Latest revision as of 17:55, 4 June 2020

Name:	Adipocyte - breast, donor1
Species:	Human (Homo sapiens)
Library ID:	CNhs11051
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	breast
dev stage	52 years old adult
sex	female
age	52
cell type	adipocyte
cell line	NA
company	Zenbio
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	N/A
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004950

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11051		CAGE		DRX008095		DRR008967

Accession ID Hg19

Library id		BAM		CTSS
CNhs11051		DRZ000392		DRZ001777

Accession ID Hg38

Library id		BAM		CTSS
CNhs11051		DRZ011742		DRZ013127

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

RNA-Seq Accession numbers

Method		Sample accession id
sRNA-Seq		SAMD00004950

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
SRhi10011.CGATGT		sRNA-Seq		DRX037164		DRR041530

Accession ID Hg19

Library id		BAM		CTSS
SRhi10011.CGATGT		DRZ007172

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0662
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.336
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	1.026
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0725
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0.0725
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.114
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.0415
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0725
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.281
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.229
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0.135
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.326
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.281
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.189
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	1.048
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.724
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.135
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.213
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.666
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0131
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.497
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.243
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.135
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.0725
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.237
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.602
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.766
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.477
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.845
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0725
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.771
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11051

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.241
MA0003.1	MA0003.1	0.401
MA0004.1	MA0004.1	0.302
MA0006.1	MA0006.1	0.116
MA0007.1	MA0007.1	0.297
MA0009.1	MA0009.1	0.207
MA0014.1	MA0014.1	0.307
MA0017.1	MA0017.1	0.489
MA0018.2	MA0018.2	1.6224e-5
MA0019.1	MA0019.1	0.383
MA0024.1	MA0024.1	1.82728e-6
MA0025.1	MA0025.1	5.63121e-4
MA0027.1	MA0027.1	0.665
MA0028.1	MA0028.1	0.0793
MA0029.1	MA0029.1	0.252
MA0030.1	MA0030.1	0.496
MA0031.1	MA0031.1	0.95
MA0035.2	MA0035.2	0.0273
MA0038.1	MA0038.1	0.0129
MA0039.2	MA0039.2	0.00311
MA0040.1	MA0040.1	0.413
MA0041.1	MA0041.1	0.608
MA0042.1	MA0042.1	0.803
MA0043.1	MA0043.1	2.76212e-4
MA0046.1	MA0046.1	0.467
MA0047.2	MA0047.2	0.373
MA0048.1	MA0048.1	0.407
MA0050.1	MA0050.1	1.68309e-4
MA0051.1	MA0051.1	0.117
MA0052.1	MA0052.1	0.603
MA0055.1	MA0055.1	0.815
MA0057.1	MA0057.1	0.506
MA0058.1	MA0058.1	0.173
MA0059.1	MA0059.1	0.714
MA0060.1	MA0060.1	4.77732e-10
MA0061.1	MA0061.1	3.33417e-4
MA0062.2	MA0062.2	1.6785e-6
MA0065.2	MA0065.2	0.203
MA0066.1	MA0066.1	0.607
MA0067.1	MA0067.1	0.11
MA0068.1	MA0068.1	0.125
MA0069.1	MA0069.1	0.0742
MA0070.1	MA0070.1	0.652
MA0071.1	MA0071.1	0.94
MA0072.1	MA0072.1	0.586
MA0073.1	MA0073.1	0.962
MA0074.1	MA0074.1	0.974
MA0076.1	MA0076.1	0.00341
MA0077.1	MA0077.1	0.462
MA0078.1	MA0078.1	0.579
MA0079.2	MA0079.2	0.95
MA0080.2	MA0080.2	2.84339e-6
MA0081.1	MA0081.1	0.0428
MA0083.1	MA0083.1	0.00505
MA0084.1	MA0084.1	0.192
MA0087.1	MA0087.1	0.321
MA0088.1	MA0088.1	0.855
MA0090.1	MA0090.1	7.68396e-8
MA0091.1	MA0091.1	0.088
MA0092.1	MA0092.1	0.0101
MA0093.1	MA0093.1	0.228
MA0099.2	MA0099.2	1.79812e-4
MA0100.1	MA0100.1	0.892
MA0101.1	MA0101.1	3.872e-7
MA0102.2	MA0102.2	0.332
MA0103.1	MA0103.1	3.78712e-5
MA0104.2	MA0104.2	0.0057
MA0105.1	MA0105.1	0.0259
MA0106.1	MA0106.1	0.31
MA0107.1	MA0107.1	9.11314e-7
MA0108.2	MA0108.2	0.0516
MA0111.1	MA0111.1	0.709
MA0112.2	MA0112.2	0.00635
MA0113.1	MA0113.1	0.0247
MA0114.1	MA0114.1	0.614
MA0115.1	MA0115.1	0.00248
MA0116.1	MA0116.1	0.887
MA0117.1	MA0117.1	0.272
MA0119.1	MA0119.1	0.121
MA0122.1	MA0122.1	0.647
MA0124.1	MA0124.1	0.301
MA0125.1	MA0125.1	0.662
MA0131.1	MA0131.1	0.227
MA0135.1	MA0135.1	0.114
MA0136.1	MA0136.1	1.9298e-8
MA0137.2	MA0137.2	0.859
MA0138.2	MA0138.2	0.251
MA0139.1	MA0139.1	0.341
MA0140.1	MA0140.1	0.256
MA0141.1	MA0141.1	0.708
MA0142.1	MA0142.1	0.101
MA0143.1	MA0143.1	0.923
MA0144.1	MA0144.1	0.586
MA0145.1	MA0145.1	0.172
MA0146.1	MA0146.1	0.771
MA0147.1	MA0147.1	0.0211
MA0148.1	MA0148.1	0.34
MA0149.1	MA0149.1	0.544
MA0150.1	MA0150.1	0.0173
MA0152.1	MA0152.1	0.00297
MA0153.1	MA0153.1	0.88
MA0154.1	MA0154.1	0.921
MA0155.1	MA0155.1	0.321
MA0156.1	MA0156.1	5.65679e-7
MA0157.1	MA0157.1	0.518
MA0159.1	MA0159.1	0.263
MA0160.1	MA0160.1	0.109
MA0162.1	MA0162.1	0.0886
MA0163.1	MA0163.1	0.383
MA0164.1	MA0164.1	0.883
MA0258.1	MA0258.1	0.63
MA0259.1	MA0259.1	0.219

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11051

Novel motif	Logo	P-value
1	1	0.747
10	10	0.713
100	100	0.669
101	101	0.198
102	102	0.0174
103	103	0.716
104	104	0.616
105	105	0.122
106	106	0.114
107	107	0.118
108	108	0.439
109	109	0.94
11	11	0.409
110	110	0.848
111	111	0.938
112	112	0.705
113	113	0.503
114	114	0.198
115	115	0.0416
116	116	0.276
117	117	0.262
118	118	0.143
119	119	0.501
12	12	0.369
120	120	0.924
121	121	0.678
122	122	0.175
123	123	0.0137
124	124	0.558
125	125	0.58
126	126	0.556
127	127	0.209
128	128	0.64
129	129	0.887
13	13	0.474
130	130	0.372
131	131	0.494
132	132	0.345
133	133	0.479
134	134	0.331
135	135	0.293
136	136	0.708
137	137	0.807
138	138	0.186
139	139	0.441
14	14	0.173
140	140	0.527
141	141	0.592
142	142	0.56
143	143	0.802
144	144	0.775
145	145	0.847
146	146	0.85
147	147	0.294
148	148	0.913
149	149	0.00215
15	15	0.764
150	150	0.75
151	151	0.904
152	152	0.0125
153	153	0.157
154	154	0.807
155	155	9.38888e-4
156	156	0.197
157	157	0.672
158	158	0.0227
159	159	0.483
16	16	0.0347
160	160	0.579
161	161	0.336
162	162	0.557
163	163	0.205
164	164	0.756
165	165	0.629
166	166	0.325
167	167	0.431
168	168	0.894
169	169	0.0411
17	17	0.849
18	18	0.402
19	19	0.0101
2	2	0.323
20	20	0.388
21	21	0.418
22	22	0.23
23	23	0.244
24	24	0.372
25	25	0.264
26	26	0.741
27	27	0.642
28	28	0.12
29	29	0.604
3	3	0.742
30	30	0.402
31	31	0.752
32	32	2.13856e-12
33	33	0.968
34	34	0.867
35	35	0.659
36	36	0.0804
37	37	0.198
38	38	0.538
39	39	0.129
4	4	0.581
40	40	0.113
41	41	0.898
42	42	0.344
43	43	0.366
44	44	0.721
45	45	0.802
46	46	0.969
47	47	0.723
48	48	0.663
49	49	0.994
5	5	0.608
50	50	0.647
51	51	0.679
52	52	0.558
53	53	0.106
54	54	0.751
55	55	0.152
56	56	0.677
57	57	0.948
58	58	0.438
59	59	0.212
6	6	0.423
60	60	0.859
61	61	0.257
62	62	0.532
63	63	0.561
64	64	0.23
65	65	0.761
66	66	0.152
67	67	0.66
68	68	0.516
69	69	0.652
7	7	0.277
70	70	0.999
71	71	0.52
72	72	0.712
73	73	0.01
74	74	0.148
75	75	0.957
76	76	0.611
77	77	0.0889
78	78	0.332
79	79	0.145
8	8	0.946
80	80	0.597
81	81	0.514
82	82	0.609
83	83	0.496
84	84	0.0843
85	85	0.0505
86	86	0.604
87	87	0.241
88	88	0.803
89	89	0.177
9	9	0.523
90	90	0.585
91	91	0.704
92	92	0.0804
93	93	0.902
94	94	0.938
95	95	0.433
96	96	0.564
97	97	0.271
98	98	0.58
99	99	0.0326

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11051

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000156 human adipocyte of breast sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000136 (fat cell)
0002617 (adipocyte of breast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000310 (breast)
0002100 (trunk)
0002384 (connective tissue)
0000479 (tissue)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0009569 (subdivision of trunk)
0001443 (chest)
0000915 (thoracic segment of trunk)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000156 (human adipocyte of breast sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|id=FF:11376-118A8
+|DRA_sample_Accession=CAGE@SAMD00004950
-|name=Adipocyte - breast, donor1
+|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004950
-|sample_id=11376
+|accession_numbers=CAGE;DRX008095;DRR008967;DRZ000392;DRZ001777;DRZ011742;DRZ013127
-|rna_tube_id=118A8
+|accession_numbers_RNASeq=sRNA-Seq;DRX037164;DRR041530;DRZ007172
-|rna_box=118
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000310,UBERON:0002100,UBERON:0002384,UBERON:0000479,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0001062,UBERON:0009569,UBERON:0001443,UBERON:0000915
-|rna_position=A8
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000325,CL:0000255,CL:0000136,CL:0002617
-|sample_cell_lot=lot:BR020399A
-|sample_cell_catalog=F-BR-F
-|sample_company=Zenbio
-|rna_lot_number=
-|rna_catalog_number=N/A
-|sample_species=Human (Homo sapiens)
-|sample_strain=
-|sample_dev_stage=52 years old adult
-|sample_tissue=breast
-|sample_donor(cell lot)=
-|sample_sex=female
-|sample_age=52
-|sample_ethnicity=C
-|rna_rin=
-|rna_od260/230=0.7
-|rna_od260/280=2.04
-|sample_cell_type=adipocyte
-|sample_cell_line=
-|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
-|sample_experimental_condition=
-|sample_disease=
-|rna_sample_type=total RNA
-|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
-|rna_weight_ug=6.6
-|rna_concentration=0.264
-|sample_note=
-|profile_hcage=CNhs11051,LSID722,release008,COMPLETED
-|profile_cagescan=,,,
-|profile_srnaseq=SRhi10011,,,
-|profile_rnaseq=,,,
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000134,CL:0000136,CL:0000144,CL:0000219,CL:0000255,CL:0000325,CL:0000548,CL:0000723,CL:0002320,CL:0002371,CL:0002617
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000310,UBERON:0000465,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000915,UBERON:0001062,UBERON:0001443,UBERON:0002384,UBERON:0005482
 |ancestors_in_disease_facet=
-|sample_description=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000156
+|comment=
+|created_by=
+|creation_date=
+|data_phase=2
+|datafreeze_phase=2
+|def=
+|expression_enrichment_score=chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!2.11!128.81!HOXC5;;chr1:170632285..170632309,+!p1@PRRX1!1.84!77.03!PRRX1;;chr12:54402745..54402788,+!p1@HOXC8!1.73!53.23!HOXC8;;chr2:119605214..119605230,-!p1@EN1!1.57!36.15!EN1;;chr19:47523058..47523114,+!p1@NPAS1!1.55!34.70!NPAS1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.54!33.97!ZBED1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.48!29.43!HOXC5;;chr18:53068911..53068935,-!p4@TCF4!1.47!32.34!TCF4;;chr9:132427883..132427951,+!p2@PRRX2!1.42!25.25!PRRX2;;chr9:132427972..132428056,+!p1@PRRX2!1.34!27.43!PRRX2;;chrX:106960180..106960197,-!p2@TSC22D3!1.24!62.13!TSC22D3;;chr1:23885981..23886002,-!p1@ID3!1.22!2658.14!ID3;;chr5:92918919..92918942,+!p1@NR2F1!1.19!63.77!NR2F1;;chr4:4861385..4861398,+!p1@MSX1!1.18!41.60!MSX1;;chr2:19558373..19558392,-!p1@OSR1!1.18!38.88!OSR1;;chr2:239756671..239756732,+!p1@TWIST2!1.17!43.97!TWIST2;;chr11:113930425..113930471,+!p1@ZBTB16!1.17!19.80!ZBTB16;;chr1:170633348..170633399,+!p2@PRRX1!1.15!17.80!PRRX1;;chr9:77112244..77112262,+!p1@RORB!1.14!14.53!RORB;;chr8:49833948..49833973,-!p2@SNAI2!1.13!78.67!SNAI2;;chr12:54402790..54402805,+!p2@HOXC8!1.13!12.54!HOXC8;;chr12:54393880..54393962,+!p1@HOXC9!1.13!12.35!HOXC9;;chr1:170632477..170632506,+!p6@PRRX1!1.13!12.35!PRRX1;;chr11:46299199..46299233,+!p1@CREB3L1!1.11!62.13!CREB3L1;;chr5:158526917..158526932,-!p1@EBF1!1.11!29.80!EBF1;;chr8:25902876..25902936,-!p1@EBF2!1.10!11.45!EBF2;;chr14:62162258..62162269,+!p2@HIF1A!1.09!110.10!HIF1A;;chr5:92919100..92919135,+!p3@NR2F1!1.09!13.63!NR2F1;;chr12:54402729..54402743,+!p3@HOXC8!1.09!11.26!HOXC8;;chr2:239756739..239756755,+!p2@TWIST2!1.08!19.08!TWIST2;;chr1:170632959..170632987,+!p4@PRRX1!1.08!11.99!PRRX1;;chr15:96874145..96874166,+!p7@NR2F2!1.07!20.89!NR2F2;;chr3:126076242..126076257,-!p1@KLF15!1.07!13.44!KLF15;;chr1:170633262..170633285,+!p3@PRRX1!1.06!11.99!PRRX1;;chr6:144329384..144329405,-!p1@PLAGL1!1.05!119.54!PLAGL1;;chr7:27192185..27192209,-!p1@HOXA3!1.04!9.99!HOXA3;;chr4:174451370..174451387,-!p1@HAND2!1.03!9.63!HAND2;;chr12:54394309..54394336,+!p2@HOXC9!1.03!9.63!HOXC9;;chr14:62162285..62162296,+!p3@HIF1A!1.02!50.69!HIF1A;;chr15:96869255..96869291,+!p6@NR2F2!1.02!17.62!NR2F2;;chr1:170633058..170633084,+!p5@PRRX1!1.02!9.45!PRRX1;;chrX:106960285..106960299,-!p1@TSC22D3!1.01!253.80!TSC22D3;;chr7:150946015..150946070,-!p3@SMARCD3!1.01!20.17!SMARCD3;;chr15:96876966..96877017,+!p12@NR2F2!1.01!13.26!NR2F2;;chr2:85981073..85981091,+!p5@ATOH8!1.01!9.27!ATOH8;;chr20:30193083..30193098,+!p1@ID1!1.00!733.80!ID1;;chr12:54410948..54410992,+!p3@HOXC5!1.00!9.08!HOXC5;;chr10:31610110..31610159,+!p2@ZEB1!1.00!8.90!ZEB1;;chr13:37494248..37494260,-!p3@SMAD9!1.00!8.90!SMAD9;;chr2:119604456..119604501,-!p2@EN1!0.98!8.54!EN1;;chr11:46299539..46299620,+!p2@CREB3L1!0.97!14.35!CREB3L1;;chr2:176994408..176994492,+!p1@HOXD8!0.97!8.36!HOXD8;;chr4:174450089..174450153,-!p2@HAND2!0.97!8.36!HAND2;;chr12:54394416..54394467,+!p5@HOXC9!0.96!8.18!HOXC9;;chr7:19157248..19157268,-!p1@TWIST1!0.95!22.35!TWIST1;;chr8:49833978..49833996,-!p1@SNAI2!0.94!163.15!SNAI2;;chr15:96874012..96874042,+!p2@NR2F2!0.94!72.13!NR2F2;;chr10:119303078..119303169,+!p2@EMX2!0.93!7.45!EMX2;;chr19:46801639..46801699,+!p1@HIF3A!0.93!7.45!HIF3A;;chr15:96873984..96873999,+!p3@NR2F2!0.92!56.14!NR2F2;;chr13:41240717..41240735,-!p2@FOXO1!0.92!51.78!FOXO1;;chr8:99956662..99956684,+!p1@OSR2!0.91!11.08!OSR2;;chr12:80085061..80085119,-!p6@PAWR!0.90!11.45!PAWR;;chr6:85473156..85473210,-!p2@TBX18!0.90!8.54!TBX18;;chr6:28321909..28321965,-!p3@ZNF323!0.90!6.90!ZNF323;;chr16:31076332..31076388,-!p3@ZNF668!0.90!6.90!ZNF668;;chr6:19837592..19837621,+!p1@ID4!0.89!43.06!ID4;;chr17:1959369..1959388,+!p2@HIC1!0.89!18.53!HIC1;;chr2:85981027..85981047,+!p8@ATOH8!0.89!6.72!ATOH8;;chr13:41240737..41240787,-!p1@FOXO1!0.88!83.39!FOXO1;;chr15:96874244..96874259,+!p5@NR2F2!0.88!16.71!NR2F2;;chr6:1389789..1389821,+!p1@FOXF2!0.88!9.27!FOXF2;;chr5:92918956..92918969,+!p4@NR2F1!0.88!7.27!NR2F1;;chr12:54422217..54422239,+!p3@HOXC6!0.88!6.54!HOXC6;;chr18:3450334..3450341,+!p15@TGIF1!0.87!8.36!TGIF1;;chr2:85981107..85981120,+!p3@ATOH8!0.87!6.36!ATOH8;;chr5:72744594..72744609,-!p1@FOXD1!0.86!30.52!FOXD1;;chr1:170632439..170632465,+!p11@PRRX1!0.86!6.18!PRRX1;;chr14:75894714..75894733,+!p1@JDP2!0.85!181.32!JDP2;;chrX:106960221..106960236,-!p3@TSC22D3!0.85!17.80!TSC22D3;;chr19:13134772..13134822,+!p2@NFIX!0.85!9.08!NFIX;;chr17:46687959..46688007,-!p2@HOXB7!0.85!8.54!HOXB7;;chr5:158526459..158526481,-!p2@EBF1!0.85!8.18!EBF1;;chr2:85980919..85980942,+!p4@ATOH8!0.85!6.54!ATOH8;;chr1:170632250..170632277,+!p7@PRRX1!0.84!6.00!PRRX1;;chr19:50432453..50432468,+!p1@ATF5!0.83!345.37!ATF5;;chr10:77161504..77161530,-!p1@ZNF503!0.83!81.76!ZNF503;;chr5:92919068..92919082,+!p5@NR2F1!0.83!6.90!NR2F1;;chr13:37494275..37494304,-!p2@SMAD9!0.83!5.81!SMAD9;;chr10:114889045..114889074,+!p12@TCF7L2!0.82!5.63!TCF7L2;;chr17:48072574..48072597,-!p1@DLX3!0.82!5.63!DLX3;;chr1:170632723..170632739,+!p8@PRRX1!0.82!5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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 66: / Line 43: @@
 |fonse_treatment=
 |fonse_treatment_closure=
-|top_motifs=
-|comment=
-|created_by=
-|creation_date=
-|def=
 |has_quality=
-|is_a=EFO:0002091;;FF:0000002;;FF:0000156;;FF:0000210
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520breast%252c%2520donor1.CNhs11051.11376-118A8.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520breast%252c%2520donor1.CNhs11051.11376-118A8.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520breast%252c%2520donor1.CNhs11051.11376-118A8.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520breast%252c%2520donor1.CNhs11051.11376-118A8.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520breast%252c%2520donor1.CNhs11051.11376-118A8.hg38.nobarcode.ctss.bed.gz
+|id=FF:11376-118A8
+|is_a=EFO:0002091;;FF:0000156
+|is_obsolete=
+|library_id=CNhs11051
+|library_id_phase_based=2:CNhs11051
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11376
+|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10011.CGATGT.11376
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11376
+|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10011.CGATGT.11376
+|name=Adipocyte - breast, donor1
 |namespace=FANTOM5
 |part_of=
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+|profile_hcage=CNhs11051,LSID722,release008,COMPLETED
+|profile_rnaseq=
+|profile_srnaseq=SRhi10011,,,
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+|rna_box=118
+|rna_catalog_number=N/A
+|rna_concentration=0.264
+|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
+|rna_lot_number=
+|rna_od260/230=0.7
+|rna_od260/280=2.04
+|rna_position=A8
+|rna_rin=
+|rna_sample_type=total RNA
+|rna_tube_id=118A8
+|rna_weight_ug=6.6
+|rnaseq_library_id=SRhi10011.CGATGT
+|sample_age=52
+|sample_category=primary cells
+|sample_cell_catalog=F-BR-F
+|sample_cell_line=
+|sample_cell_lot=lot:BR020399A
+|sample_cell_type=adipocyte
+|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
+|sample_company=Zenbio
+|sample_description=
+|sample_dev_stage=52 years old adult
+|sample_disease=
+|sample_donor(cell lot)=
+|sample_ethnicity=C
+|sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.90607699858864e-220!GO:0005737;cytoplasm;3.57834749980777e-174!GO:0043231;intracellular membrane-bound organelle;5.19944003269726e-150!GO:0043227;membrane-bound organelle;7.91740282780845e-150!GO:0043226;organelle;4.10583759562855e-148!GO:0043229;intracellular organelle;9.71081305045976e-148!GO:0044444;cytoplasmic part;1.80534889121994e-139!GO:0044422;organelle part;1.48848128704339e-105!GO:0044446;intracellular organelle part;3.55131715859062e-104!GO:0005515;protein binding;4.53543109063053e-72!GO:0032991;macromolecular complex;4.59972533495384e-72!GO:0044237;cellular metabolic process;1.78168594670772e-69!GO:0044238;primary metabolic process;6.81224825423379e-69!GO:0030529;ribonucleoprotein complex;6.27513636227005e-68!GO:0005739;mitochondrion;1.23122944313453e-62!GO:0043170;macromolecule metabolic process;5.22551765442968e-60!GO:0043233;organelle lumen;9.28992994263197e-59!GO:0031974;membrane-enclosed lumen;9.28992994263197e-59!GO:0031090;organelle membrane;5.49822779434854e-52!GO:0044428;nuclear part;2.26371245024117e-49!GO:0003723;RNA binding;9.47329273701492e-47!GO:0019538;protein metabolic process;4.24093423126578e-42!GO:0044429;mitochondrial part;4.3440657382003e-42!GO:0005840;ribosome;9.31906478889889e-42!GO:0005634;nucleus;1.05092835377555e-41!GO:0015031;protein transport;2.45845427960023e-41!GO:0016043;cellular component organization and biogenesis;7.05217833996036e-40!GO:0033036;macromolecule localization;7.77258834979984e-40!GO:0006412;translation;1.41584195305722e-39!GO:0009058;biosynthetic process;3.35995436448963e-39!GO:0045184;establishment of protein localization;1.07171136716902e-38!GO:0008104;protein localization;1.36138414160204e-37!GO:0044260;cellular macromolecule metabolic process;2.81855855485063e-37!GO:0003735;structural constituent of ribosome;7.58114456532108e-37!GO:0031967;organelle envelope;1.75740817202064e-36!GO:0031975;envelope;3.00966910693477e-36!GO:0044267;cellular protein metabolic process;4.80440125394462e-36!GO:0005829;cytosol;1.48621878341935e-35!GO:0044249;cellular biosynthetic process;3.74397436633767e-35!GO:0043234;protein complex;5.4631698179407e-35!GO:0006396;RNA processing;1.87201831134437e-34!GO:0009059;macromolecule biosynthetic process;1.09719830472227e-33!GO:0046907;intracellular transport;5.9591104283479e-33!GO:0033279;ribosomal subunit;1.0827886735213e-31!GO:0031981;nuclear lumen;4.15136530207557e-31!GO:0016071;mRNA metabolic process;5.64246027485497e-29!GO:0010467;gene expression;6.39971427869071e-29!GO:0005740;mitochondrial envelope;7.39861030331062e-29!GO:0006886;intracellular protein transport;7.62549362668075e-28!GO:0008380;RNA splicing;1.22350894638666e-27!GO:0031966;mitochondrial membrane;1.50815325253092e-27!GO:0043283;biopolymer metabolic process;2.24001136007881e-27!GO:0005783;endoplasmic reticulum;2.18872437691074e-25!GO:0006397;mRNA processing;3.86285449393671e-25!GO:0019866;organelle inner membrane;3.95127251127791e-25!GO:0005743;mitochondrial inner membrane;2.16676163599904e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.93836356258451e-23!GO:0065003;macromolecular complex assembly;2.75595102427124e-22!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.40384776391088e-21!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.42613728514705e-21!GO:0006119;oxidative phosphorylation;7.17999154982774e-21!GO:0006457;protein folding;1.45757937509894e-20!GO:0012505;endomembrane system;1.63621403724184e-20!GO:0022607;cellular component assembly;2.50607244892901e-20!GO:0044432;endoplasmic reticulum part;3.57967696217621e-20!GO:0044455;mitochondrial membrane part;1.20988804851786e-19!GO:0051649;establishment of cellular localization;1.77804742413762e-19!GO:0051641;cellular localization;1.96348389068512e-19!GO:0005681;spliceosome;2.17800452307663e-19!GO:0005654;nucleoplasm;2.70596784435702e-19!GO:0044445;cytosolic part;2.39107172697703e-18!GO:0048770;pigment granule;3.64864831518038e-18!GO:0042470;melanosome;3.64864831518038e-18!GO:0005794;Golgi apparatus;1.76052172055142e-17!GO:0006996;organelle organization and biogenesis;4.80355393550572e-17!GO:0031980;mitochondrial lumen;2.04724607935479e-16!GO:0005759;mitochondrial matrix;2.04724607935479e-16!GO:0015934;large ribosomal subunit;2.83233458365406e-16!GO:0015935;small ribosomal subunit;3.05673605419136e-16!GO:0005746;mitochondrial respiratory chain;4.02925310653472e-16!GO:0044451;nucleoplasm part;4.49201944870512e-16!GO:0051186;cofactor metabolic process;1.10848132845645e-15!GO:0016874;ligase activity;3.40663995888953e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.44052385129797e-15!GO:0008134;transcription factor binding;3.9201732791553e-15!GO:0016462;pyrophosphatase activity;4.17895412195459e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;4.84458770642411e-15!GO:0048193;Golgi vesicle transport;9.11297588191254e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.36602520053131e-14!GO:0022618;protein-RNA complex assembly;1.45860935662514e-14!GO:0017111;nucleoside-triphosphatase activity;1.63377691771115e-14!GO:0051082;unfolded protein binding;1.82118705341071e-14!GO:0006512;ubiquitin cycle;8.76054218635268e-14!GO:0000166;nucleotide binding;8.76254311749235e-14!GO:0050136;NADH dehydrogenase (quinone) activity;8.76254311749235e-14!GO:0003954;NADH dehydrogenase activity;8.76254311749235e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.76254311749235e-14!GO:0043228;non-membrane-bound organelle;8.83406464665716e-14!GO:0043232;intracellular non-membrane-bound organelle;8.83406464665716e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.76794432639504e-14!GO:0006605;protein targeting;1.44768921852251e-13!GO:0000502;proteasome complex (sensu Eukaryota);2.3834515379942e-13!GO:0005789;endoplasmic reticulum membrane;2.89171640419779e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;3.91613346110803e-13!GO:0016192;vesicle-mediated transport;4.3770066714815e-13!GO:0005730;nucleolus;6.9581913219197e-13!GO:0019941;modification-dependent protein catabolic process;7.79525146188996e-13!GO:0043632;modification-dependent macromolecule catabolic process;7.79525146188996e-13!GO:0044257;cellular protein catabolic process;8.94935246691391e-13!GO:0044265;cellular macromolecule catabolic process;1.0169617696532e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.11965507965115e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.14219574798856e-12!GO:0009055;electron carrier activity;1.18250380603424e-12!GO:0006732;coenzyme metabolic process;1.69604227262629e-12!GO:0005761;mitochondrial ribosome;1.81120476124059e-12!GO:0000313;organellar ribosome;1.81120476124059e-12!GO:0044248;cellular catabolic process;1.85612680672965e-12!GO:0008135;translation factor activity, nucleic acid binding;2.74343366659629e-12!GO:0043285;biopolymer catabolic process;3.70981984100979e-12!GO:0042775;organelle ATP synthesis coupled electron transport;3.71483102491816e-12!GO:0042773;ATP synthesis coupled electron transport;3.71483102491816e-12!GO:0030964;NADH dehydrogenase complex (quinone);4.07033960572867e-12!GO:0045271;respiratory chain complex I;4.07033960572867e-12!GO:0005747;mitochondrial respiratory chain complex I;4.07033960572867e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.40047635190364e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.04008786011716e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.18340099488782e-11!GO:0009057;macromolecule catabolic process;2.86954267434922e-11!GO:0016070;RNA metabolic process;3.47409443423619e-11!GO:0030163;protein catabolic process;3.69204137485887e-11!GO:0005793;ER-Golgi intermediate compartment;5.67555132455473e-11!GO:0016491;oxidoreductase activity;6.65121771488491e-11!GO:0012501;programmed cell death;9.88049313317381e-11!GO:0006915;apoptosis;1.95529040133489e-10!GO:0008565;protein transporter activity;2.27120212559385e-10!GO:0003676;nucleic acid binding;5.60754657388394e-10!GO:0008219;cell death;6.50336018554337e-10!GO:0016265;death;6.50336018554337e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;7.9811656428737e-10!GO:0000375;RNA splicing, via transesterification reactions;7.9811656428737e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.9811656428737e-10!GO:0005788;endoplasmic reticulum lumen;8.53693780229445e-10!GO:0017076;purine nucleotide binding;9.06425690520197e-10!GO:0003712;transcription cofactor activity;9.22715542460241e-10!GO:0003743;translation initiation factor activity;1.24666119261933e-09!GO:0043412;biopolymer modification;2.10466425166809e-09!GO:0005768;endosome;2.38998334585795e-09!GO:0006413;translational initiation;2.38998334585795e-09!GO:0032553;ribonucleotide binding;2.67873109265566e-09!GO:0032555;purine ribonucleotide binding;2.67873109265566e-09!GO:0048523;negative regulation of cellular process;2.68156768343007e-09!GO:0009259;ribonucleotide metabolic process;3.04453193326209e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.44579749377011e-09!GO:0006446;regulation of translational initiation;5.31314427182978e-09!GO:0005635;nuclear envelope;7.2916571923381e-09!GO:0019787;small conjugating protein ligase activity;9.30476273878908e-09!GO:0006259;DNA metabolic process;9.53085710240621e-09!GO:0009150;purine ribonucleotide metabolic process;1.10561843277974e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.29057767913083e-08!GO:0006163;purine nucleotide metabolic process;1.51337717493862e-08!GO:0006464;protein modification process;1.57870015234971e-08!GO:0006461;protein complex assembly;1.5831620844912e-08!GO:0031965;nuclear membrane;1.63351901154865e-08!GO:0008639;small protein conjugating enzyme activity;2.0445918447368e-08!GO:0009199;ribonucleoside triphosphate metabolic process;2.12098301875737e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.18979700438157e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.23089216804611e-08!GO:0045333;cellular respiration;2.58984456308134e-08!GO:0009060;aerobic respiration;2.72385833106585e-08!GO:0006091;generation of precursor metabolites and energy;2.81894935044679e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.82096018634592e-08!GO:0009144;purine nucleoside triphosphate metabolic process;2.82096018634592e-08!GO:0009141;nucleoside triphosphate metabolic process;3.80628445357027e-08!GO:0004842;ubiquitin-protein ligase activity;3.90290619437128e-08!GO:0016604;nuclear body;4.00623115102658e-08!GO:0009260;ribonucleotide biosynthetic process;4.16660707751357e-08!GO:0015986;ATP synthesis coupled proton transport;4.7228024226933e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.7228024226933e-08!GO:0009152;purine ribonucleotide biosynthetic process;5.19231222946874e-08!GO:0042254;ribosome biogenesis and assembly;6.27733310536232e-08!GO:0006164;purine nucleotide biosynthetic process;7.34708650663084e-08!GO:0006913;nucleocytoplasmic transport;7.50070750831868e-08!GO:0009142;nucleoside triphosphate biosynthetic process;7.58092009187713e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;7.58092009187713e-08!GO:0048519;negative regulation of biological process;8.48863543463831e-08!GO:0048475;coated membrane;8.9418971627069e-08!GO:0030117;membrane coat;8.9418971627069e-08!GO:0006366;transcription from RNA polymerase II promoter;9.05589536182325e-08!GO:0016881;acid-amino acid ligase activity;9.86829500895611e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.01673535458041e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.01673535458041e-07!GO:0030120;vesicle coat;1.12071671398212e-07!GO:0030662;coated vesicle membrane;1.12071671398212e-07!GO:0051169;nuclear transport;1.23159995866432e-07!GO:0003714;transcription corepressor activity;1.66150231571564e-07!GO:0009056;catabolic process;1.92313050120973e-07!GO:0016607;nuclear speck;1.98243286914207e-07!GO:0008361;regulation of cell size;2.21767914115904e-07!GO:0046034;ATP metabolic process;2.27070811379796e-07!GO:0005773;vacuole;2.30751252779924e-07!GO:0044431;Golgi apparatus part;2.6838545756361e-07!GO:0016049;cell growth;2.92148400726222e-07!GO:0051187;cofactor catabolic process;2.98082784154299e-07!GO:0016887;ATPase activity;3.34720241849219e-07!GO:0051188;cofactor biosynthetic process;3.68610827486805e-07!GO:0042623;ATPase activity, coupled;3.70999031952027e-07!GO:0006399;tRNA metabolic process;4.10209579339762e-07!GO:0007005;mitochondrion organization and biogenesis;4.14579738439744e-07!GO:0017038;protein import;4.3230088373376e-07!GO:0009109;coenzyme catabolic process;4.59289174179464e-07!GO:0043687;post-translational protein modification;4.76773162447603e-07!GO:0019829;cation-transporting ATPase activity;5.1057101524446e-07!GO:0016564;transcription repressor activity;5.13254799643126e-07!GO:0008654;phospholipid biosynthetic process;5.43891918748786e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.51777700696559e-07!GO:0006099;tricarboxylic acid cycle;5.53773879590577e-07!GO:0046356;acetyl-CoA catabolic process;5.53773879590577e-07!GO:0003924;GTPase activity;6.43455451673739e-07!GO:0044453;nuclear membrane part;6.65950756634055e-07!GO:0006754;ATP biosynthetic process;7.10184505868007e-07!GO:0006753;nucleoside phosphate metabolic process;7.10184505868007e-07!GO:0031988;membrane-bound vesicle;8.00167178865686e-07!GO:0015078;hydrogen ion transmembrane transporter activity;8.75051770767571e-07!GO:0016023;cytoplasmic membrane-bound vesicle;8.82288504806329e-07!GO:0031252;leading edge;9.99125928756873e-07!GO:0050794;regulation of cellular process;1.02791297190341e-06!GO:0030554;adenyl nucleotide binding;1.07256480440261e-06!GO:0005798;Golgi-associated vesicle;1.1699592322329e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.38096172148708e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.38096172148708e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.38096172148708e-06!GO:0006084;acetyl-CoA metabolic process;1.44663770653881e-06!GO:0043038;amino acid activation;1.75018109041429e-06!GO:0006418;tRNA aminoacylation for protein translation;1.75018109041429e-06!GO:0043039;tRNA aminoacylation;1.75018109041429e-06!GO:0006974;response to DNA damage stimulus;1.90108976819543e-06!GO:0051246;regulation of protein metabolic process;1.90108976819543e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.93085689007717e-06!GO:0005524;ATP binding;1.93274375669591e-06!GO:0000323;lytic vacuole;2.17497918551791e-06!GO:0005764;lysosome;2.17497918551791e-06!GO:0032559;adenyl ribonucleotide binding;2.35482732278231e-06!GO:0044440;endosomal part;2.47982716706921e-06!GO:0010008;endosome membrane;2.47982716706921e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.68610774656466e-06!GO:0001558;regulation of cell growth;2.7045577591551e-06!GO:0007049;cell cycle;2.76645694699249e-06!GO:0065002;intracellular protein transport across a membrane;3.16039445212153e-06!GO:0015980;energy derivation by oxidation of organic compounds;3.18444083059955e-06!GO:0042981;regulation of apoptosis;3.85619841386622e-06!GO:0016853;isomerase activity;3.98814750744389e-06!GO:0043067;regulation of programmed cell death;4.17721855889923e-06!GO:0044262;cellular carbohydrate metabolic process;4.38838335431808e-06!GO:0030133;transport vesicle;4.7058557159012e-06!GO:0005770;late endosome;5.12330261780919e-06!GO:0043069;negative regulation of programmed cell death;5.44218812527354e-06!GO:0051789;response to protein stimulus;6.2227718798206e-06!GO:0006986;response to unfolded protein;6.2227718798206e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.94795850056091e-06!GO:0031982;vesicle;7.01852904749068e-06!GO:0016469;proton-transporting two-sector ATPase complex;7.11598056383652e-06!GO:0009719;response to endogenous stimulus;7.19195035206005e-06!GO:0043066;negative regulation of apoptosis;8.01781418093753e-06!GO:0031410;cytoplasmic vesicle;8.85773573570254e-06!GO:0006752;group transfer coenzyme metabolic process;1.08391561286655e-05!GO:0005525;GTP binding;1.11942583313099e-05!GO:0045259;proton-transporting ATP synthase complex;1.23641190419827e-05!GO:0019867;outer membrane;1.28592945820653e-05!GO:0009108;coenzyme biosynthetic process;1.45160895232769e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.45280832938947e-05!GO:0006613;cotranslational protein targeting to membrane;1.51691321870379e-05!GO:0045454;cell redox homeostasis;1.55073499795802e-05!GO:0031324;negative regulation of cellular metabolic process;1.55762856758007e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.65937961309807e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.7078335962708e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.87935525312973e-05!GO:0005643;nuclear pore;1.92623827029929e-05!GO:0031968;organelle outer membrane;1.99242542590163e-05!GO:0016859;cis-trans isomerase activity;2.07113852745823e-05!GO:0032446;protein modification by small protein conjugation;2.18125699179147e-05!GO:0005791;rough endoplasmic reticulum;2.26595215408339e-05!GO:0005667;transcription factor complex;2.33162734419608e-05!GO:0050789;regulation of biological process;2.46967829009993e-05!GO:0016567;protein ubiquitination;2.64065147992057e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.99509565647395e-05!GO:0009117;nucleotide metabolic process;3.05563389210578e-05!GO:0008026;ATP-dependent helicase activity;3.36863613445344e-05!GO:0045786;negative regulation of progression through cell cycle;3.60158854945374e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.60158854945374e-05!GO:0005048;signal sequence binding;3.82852334845478e-05!GO:0006916;anti-apoptosis;3.97526018571824e-05!GO:0000139;Golgi membrane;3.97918906476443e-05!GO:0051726;regulation of cell cycle;4.03080309386583e-05!GO:0046474;glycerophospholipid biosynthetic process;4.06971884735236e-05!GO:0000074;regulation of progression through cell cycle;4.84149210898747e-05!GO:0000151;ubiquitin ligase complex;4.92095901216557e-05!GO:0008610;lipid biosynthetic process;6.12897600600472e-05!GO:0006364;rRNA processing;6.37552676406598e-05!GO:0000245;spliceosome assembly;6.47921746724366e-05!GO:0032561;guanyl ribonucleotide binding;6.4890465591075e-05!GO:0019001;guanyl nucleotide binding;6.4890465591075e-05!GO:0030867;rough endoplasmic reticulum membrane;6.7061261380987e-05!GO:0004298;threonine endopeptidase activity;6.95724645534185e-05!GO:0051170;nuclear import;7.21258025415625e-05!GO:0004386;helicase activity;7.21258025415625e-05!GO:0005905;coated pit;7.35708400010403e-05!GO:0009892;negative regulation of metabolic process;7.79043053902762e-05!GO:0005741;mitochondrial outer membrane;8.94623971872915e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;9.78938318759175e-05!GO:0006281;DNA repair;0.000101201188587781!GO:0046930;pore complex;0.000108700719707725!GO:0016072;rRNA metabolic process;0.000111888782104229!GO:0019752;carboxylic acid metabolic process;0.000113051791306208!GO:0040008;regulation of growth;0.000122251542763767!GO:0006082;organic acid metabolic process;0.000125572073072451!GO:0006606;protein import into nucleus;0.000126565409334894!GO:0030029;actin filament-based process;0.000128680467997722!GO:0005762;mitochondrial large ribosomal subunit;0.00013343274758062!GO:0000315;organellar large ribosomal subunit;0.00013343274758062!GO:0033116;ER-Golgi intermediate compartment membrane;0.000156737324276676!GO:0006612;protein targeting to membrane;0.000163341734695282!GO:0016787;hydrolase activity;0.000171941951394507!GO:0005769;early endosome;0.000194325567527793!GO:0048522;positive regulation of cellular process;0.000212223660693476!GO:0016044;membrane organization and biogenesis;0.000228639755781928!GO:0043566;structure-specific DNA binding;0.000234736613259734!GO:0022402;cell cycle process;0.000249188418727695!GO:0006403;RNA localization;0.000252909642762164!GO:0050657;nucleic acid transport;0.000254544124358997!GO:0051236;establishment of RNA localization;0.000254544124358997!GO:0050658;RNA transport;0.000254544124358997!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000255488802724509!GO:0003724;RNA helicase activity;0.000293093720820174!GO:0008092;cytoskeletal protein binding;0.000309569811191411!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000325928695157952!GO:0015399;primary active transmembrane transporter activity;0.000325928695157952!GO:0003697;single-stranded DNA binding;0.00033317245304109!GO:0007050;cell cycle arrest;0.0003540483566627!GO:0004576;oligosaccharyl transferase activity;0.000379298903970384!GO:0006650;glycerophospholipid metabolic process;0.000382926423407336!GO:0005885;Arp2/3 protein complex;0.00038735457920059!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000396774373858368!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000438021298660123!GO:0008250;oligosaccharyl transferase complex;0.000471527174805735!GO:0003713;transcription coactivator activity;0.000481299901350883!GO:0043021;ribonucleoprotein binding;0.000484655587674109!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000496102211611741!GO:0030663;COPI coated vesicle membrane;0.000521942107969954!GO:0030126;COPI vesicle coat;0.000521942107969954!GO:0000314;organellar small ribosomal subunit;0.000632556994934949!GO:0005763;mitochondrial small ribosomal subunit;0.000632556994934949!GO:0007243;protein kinase cascade;0.000662496049416767!GO:0051427;hormone receptor binding;0.000673322553608487!GO:0046489;phosphoinositide biosynthetic process;0.000689525125050585!GO:0006839;mitochondrial transport;0.000709393061496245!GO:0046467;membrane lipid biosynthetic process;0.000732489796699346!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000767370710745506!GO:0016563;transcription activator activity;0.000810168570422688!GO:0006793;phosphorus metabolic process;0.000873137297273767!GO:0006796;phosphate metabolic process;0.000873137297273767!GO:0043623;cellular protein complex assembly;0.000952885448482401!GO:0051920;peroxiredoxin activity;0.000955590759870731!GO:0006979;response to oxidative stress;0.000955590759870731!GO:0016481;negative regulation of transcription;0.000959482649571331!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00100868536063212!GO:0030137;COPI-coated vesicle;0.00104615282006348!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.00104615282006348!GO:0006118;electron transport;0.00108056143222235!GO:0001726;ruffle;0.00110128221942749!GO:0016779;nucleotidyltransferase activity;0.00112896207053083!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00114835180539729!GO:0035257;nuclear hormone receptor binding;0.00119798822857984!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00122221415407!GO:0048471;perinuclear region of cytoplasm;0.00131225684282515!GO:0018196;peptidyl-asparagine modification;0.00133365704863015!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00133365704863015!GO:0048468;cell development;0.00137669083536486!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00151144328542342!GO:0006891;intra-Golgi vesicle-mediated transport;0.00151687568280465!GO:0043681;protein import into mitochondrion;0.00151687568280465!GO:0050662;coenzyme binding;0.00158422069769113!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00162477665966997!GO:0044255;cellular lipid metabolic process;0.0016694362433102!GO:0030027;lamellipodium;0.00167735568549711!GO:0016740;transferase activity;0.00174039055292863!GO:0007006;mitochondrial membrane organization and biogenesis;0.0017602938246884!GO:0016310;phosphorylation;0.00198618334296865!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00204501116478882!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00204501116478882!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00204501116478882!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00215693299471742!GO:0051287;NAD binding;0.00237276296440912!GO:0019843;rRNA binding;0.00243623544738681!GO:0019899;enzyme binding;0.0025590751650892!GO:0043284;biopolymer biosynthetic process;0.00263368063279887!GO:0043492;ATPase activity, coupled to movement of substances;0.00263368063279887!GO:0008186;RNA-dependent ATPase activity;0.00290770595973908!GO:0006626;protein targeting to mitochondrion;0.00302381125310488!GO:0006260;DNA replication;0.00305750241865212!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00306975126254639!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00318307457848905!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00318792491254872!GO:0065007;biological regulation;0.00323585930432446!GO:0051028;mRNA transport;0.0032606785399674!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00343577040545465!GO:0030118;clathrin coat;0.00353874240110845!GO:0022890;inorganic cation transmembrane transporter activity;0.00355145724109985!GO:0016126;sterol biosynthetic process;0.00359506857546794!GO:0030658;transport vesicle membrane;0.00366221101494385!GO:0004177;aminopeptidase activity;0.00381612920260335!GO:0003899;DNA-directed RNA polymerase activity;0.00392228921351467!GO:0030176;integral to endoplasmic reticulum membrane;0.00395654481513007!GO:0031072;heat shock protein binding;0.00397857981191305!GO:0016197;endosome transport;0.00403363512220485!GO:0065004;protein-DNA complex assembly;0.00428077687112806!GO:0007040;lysosome organization and biogenesis;0.00430530663735412!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00434817761690285!GO:0048500;signal recognition particle;0.00438901633941326!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00449698276747452!GO:0015002;heme-copper terminal oxidase activity;0.00449698276747452!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00449698276747452!GO:0004129;cytochrome-c oxidase activity;0.00449698276747452!GO:0006509;membrane protein ectodomain proteolysis;0.00449698276747452!GO:0033619;membrane protein proteolysis;0.00449698276747452!GO:0019222;regulation of metabolic process;0.00454434992301106!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00459381778781164!GO:0065009;regulation of a molecular function;0.00461534266281222!GO:0030132;clathrin coat of coated pit;0.004753902586513!GO:0051540;metal cluster binding;0.00475646516314778!GO:0051536;iron-sulfur cluster binding;0.00475646516314778!GO:0006383;transcription from RNA polymerase III promoter;0.00488781885262231!GO:0006790;sulfur metabolic process;0.00493196203222106!GO:0005813;centrosome;0.00500883212873043!GO:0009165;nucleotide biosynthetic process;0.00500883212873043!GO:0035258;steroid hormone receptor binding;0.00512054890702587!GO:0006643;membrane lipid metabolic process;0.00526043860558813!GO:0048518;positive regulation of biological process;0.00528155074828105!GO:0007010;cytoskeleton organization and biogenesis;0.00539900233423517!GO:0030384;phosphoinositide metabolic process;0.00544356593503176!GO:0031902;late endosome membrane;0.00559658114272272!GO:0043488;regulation of mRNA stability;0.00563594062561624!GO:0043487;regulation of RNA stability;0.00563594062561624!GO:0030880;RNA polymerase complex;0.00567527487378521!GO:0005583;fibrillar collagen;0.00569451286068704!GO:0048487;beta-tubulin binding;0.00569451286068704!GO:0006414;translational elongation;0.00592688989220388!GO:0045792;negative regulation of cell size;0.00598328349298665!GO:0030134;ER to Golgi transport vesicle;0.00601134973951715!GO:0007264;small GTPase mediated signal transduction;0.00601134973951715!GO:0042158;lipoprotein biosynthetic process;0.00602918156812268!GO:0030518;steroid hormone receptor signaling pathway;0.00611436178776254!GO:0005581;collagen;0.0061889510834422!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00644004966296223!GO:0045047;protein targeting to ER;0.00644004966296223!GO:0030521;androgen receptor signaling pathway;0.00650644215860631!GO:0030127;COPII vesicle coat;0.0066396963959154!GO:0012507;ER to Golgi transport vesicle membrane;0.0066396963959154!GO:0007034;vacuolar transport;0.00665709629339553!GO:0004004;ATP-dependent RNA helicase activity;0.0067662095672128!GO:0005774;vacuolar membrane;0.00690376684503326!GO:0008139;nuclear localization sequence binding;0.0069137580938826!GO:0006497;protein amino acid lipidation;0.00697002294376588!GO:0009967;positive regulation of signal transduction;0.00716350569797024!GO:0050811;GABA receptor binding;0.00716865045775576!GO:0030308;negative regulation of cell growth;0.00742153175733834!GO:0003729;mRNA binding;0.0077466679516775!GO:0046483;heterocycle metabolic process;0.00786645427467893!GO:0005869;dynactin complex;0.00796327652224284!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00804243316506135!GO:0005815;microtubule organizing center;0.00805083041763878!GO:0015992;proton transport;0.00818797358351337!GO:0051128;regulation of cellular component organization and biogenesis;0.00827335195968428!GO:0051252;regulation of RNA metabolic process;0.00827335195968428!GO:0000902;cell morphogenesis;0.008318284722927!GO:0032989;cellular structure morphogenesis;0.008318284722927!GO:0000096;sulfur amino acid metabolic process;0.00845882232448598!GO:0016860;intramolecular oxidoreductase activity;0.00871318712872551!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00877531588884911!GO:0006635;fatty acid beta-oxidation;0.00900532344357546!GO:0051168;nuclear export;0.00913358639800771!GO:0006818;hydrogen transport;0.00920811162830418!GO:0007033;vacuole organization and biogenesis;0.00941967705552799!GO:0003779;actin binding;0.00956587015067569!GO:0006892;post-Golgi vesicle-mediated transport;0.00961808701951998!GO:0051087;chaperone binding;0.00962484194449176!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00962484194449176!GO:0019318;hexose metabolic process;0.00975945874059731!GO:0030660;Golgi-associated vesicle membrane;0.0101763719822127!GO:0048037;cofactor binding;0.0102751405256541!GO:0005975;carbohydrate metabolic process;0.0103844766893454!GO:0006644;phospholipid metabolic process;0.0105655065294144!GO:0006506;GPI anchor biosynthetic process;0.0107058719450472!GO:0030041;actin filament polymerization;0.0108044195515815!GO:0033673;negative regulation of kinase activity;0.0112367229585082!GO:0006469;negative regulation of protein kinase activity;0.0112367229585082!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0113050375860055!GO:0000428;DNA-directed RNA polymerase complex;0.0113050375860055!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0113173356180516!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0118516404661917!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0118516404661917!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0118516404661917!GO:0008312;7S RNA binding;0.0119538244876094!GO:0017166;vinculin binding;0.0119538244876094!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0125007452873186!GO:0044420;extracellular matrix part;0.0126149326188706!GO:0043433;negative regulation of transcription factor activity;0.0126332124364867!GO:0051329;interphase of mitotic cell cycle;0.0127367307601812!GO:0016568;chromatin modification;0.0130104554304798!GO:0005996;monosaccharide metabolic process;0.0130227699934771!GO:0008180;signalosome;0.0131246864917234!GO:0016408;C-acyltransferase activity;0.013191378477332!GO:0051325;interphase;0.0134552867007542!GO:0005862;muscle thin filament tropomyosin;0.0135016417876105!GO:0006352;transcription initiation;0.0137379598471923!GO:0007160;cell-matrix adhesion;0.0137683285374321!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0138361846538856!GO:0045892;negative regulation of transcription, DNA-dependent;0.014118268973868!GO:0051539;4 iron, 4 sulfur cluster binding;0.0141315405347105!GO:0051348;negative regulation of transferase activity;0.0141315405347105!GO:0003690;double-stranded DNA binding;0.0144689435336954!GO:0046519;sphingoid metabolic process;0.0144768967955996!GO:0006505;GPI anchor metabolic process;0.014831965791317!GO:0006629;lipid metabolic process;0.0148371280389003!GO:0006695;cholesterol biosynthetic process;0.014945034445003!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0153997215960112!GO:0000049;tRNA binding;0.0154521674362483!GO:0031589;cell-substrate adhesion;0.015481471451837!GO:0006323;DNA packaging;0.0156520702501873!GO:0015630;microtubule cytoskeleton;0.0159088199604512!GO:0045045;secretory pathway;0.0162336142035679!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0168243385967884!GO:0044437;vacuolar part;0.0170733233332521!GO:0006897;endocytosis;0.0179451032292199!GO:0010324;membrane invagination;0.0179451032292199!GO:0030503;regulation of cell redox homeostasis;0.0180435860706578!GO:0006402;mRNA catabolic process;0.0182375876706682!GO:0003711;transcription elongation regulator activity;0.0187436100699714!GO:0035035;histone acetyltransferase binding;0.0191148455829165!GO:0030659;cytoplasmic vesicle membrane;0.0192453263331639!GO:0006749;glutathione metabolic process;0.0192453263331639!GO:0008652;amino acid biosynthetic process;0.0192964382534028!GO:0008320;protein transmembrane transporter activity;0.019376876560339!GO:0005765;lysosomal membrane;0.0194223022085381!GO:0006066;alcohol metabolic process;0.0194385246832573!GO:0007041;lysosomal transport;0.0196388721404545!GO:0032787;monocarboxylic acid metabolic process;0.0196734029168245!GO:0000278;mitotic cell cycle;0.019823235963267!GO:0044452;nucleolar part;0.0199808426661415!GO:0006778;porphyrin metabolic process;0.0199923408448643!GO:0033013;tetrapyrrole metabolic process;0.0199923408448643!GO:0043022;ribosome binding;0.0201044373430888!GO:0008632;apoptotic program;0.0201044373430888!GO:0044438;microbody part;0.0201584190740844!GO:0044439;peroxisomal part;0.0201584190740844!GO:0006693;prostaglandin metabolic process;0.0201761795298033!GO:0006692;prostanoid metabolic process;0.0201761795298033!GO:0030119;AP-type membrane coat adaptor complex;0.0202354903851904!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0202354903851904!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0202354903851904!GO:0016363;nuclear matrix;0.0203232928672912!GO:0006740;NADPH regeneration;0.0204841941681865!GO:0006098;pentose-phosphate shunt;0.0204841941681865!GO:0030145;manganese ion binding;0.0206442194570439!GO:0005595;collagen type XII;0.02127985554224!GO:0033559;unsaturated fatty acid metabolic process;0.0214300337921317!GO:0006636;unsaturated fatty acid biosynthetic process;0.0214300337921317!GO:0050681;androgen receptor binding;0.0217968021417853!GO:0016272;prefoldin complex;0.0217968021417853!GO:0005520;insulin-like growth factor binding;0.0217968021417853!GO:0045926;negative regulation of growth;0.0219537634896173!GO:0005586;collagen type III;0.0223669910193913!GO:0043086;negative regulation of catalytic activity;0.0225917296558025!GO:0031418;L-ascorbic acid binding;0.0226810255114876!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0229155772105266!GO:0000059;protein import into nucleus, docking;0.0231665494087792!GO:0031901;early endosome membrane;0.023323682243999!GO:0048144;fibroblast proliferation;0.023323682243999!GO:0048145;regulation of fibroblast proliferation;0.023323682243999!GO:0008154;actin polymerization and/or depolymerization;0.0233291791013079!GO:0006006;glucose metabolic process;0.023935001391949!GO:0007021;tubulin folding;0.0240303852609214!GO:0030522;intracellular receptor-mediated signaling pathway;0.0241982871609617!GO:0003746;translation elongation factor activity;0.0242058457079638!GO:0000339;RNA cap binding;0.0242585410461679!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0249239813005478!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0250343778318613!GO:0008147;structural constituent of bone;0.0250663748142033!GO:0005801;cis-Golgi network;0.0251790422850806!GO:0006595;polyamine metabolic process;0.0254776193379989!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0257738364107524!GO:0003756;protein disulfide isomerase activity;0.0277531174689024!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0277531174689024!GO:0001872;zymosan binding;0.0277531174689024!GO:0001878;response to yeast;0.0277531174689024!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0279928794135887!GO:0031903;microbody membrane;0.0284668183503634!GO:0005778;peroxisomal membrane;0.0284668183503634!GO:0008033;tRNA processing;0.0288287958490818!GO:0001725;stress fiber;0.0292515622040503!GO:0032432;actin filament bundle;0.0292515622040503!GO:0005684;U2-dependent spliceosome;0.0301695329536145!GO:0005832;chaperonin-containing T-complex;0.0304149941708998!GO:0000287;magnesium ion binding;0.0304915919416851!GO:0030125;clathrin vesicle coat;0.0308841882734324!GO:0030665;clathrin coated vesicle membrane;0.0308841882734324!GO:0045893;positive regulation of transcription, DNA-dependent;0.0310613990211256!GO:0051098;regulation of binding;0.0312073917686433!GO:0048146;positive regulation of fibroblast proliferation;0.031300702607918!GO:0008286;insulin receptor signaling pathway;0.0315458502066402!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0328378186686442!GO:0006672;ceramide metabolic process;0.033290206731153!GO:0030131;clathrin adaptor complex;0.0333422332841798!GO:0031529;ruffle organization and biogenesis;0.0337410973986679!GO:0032984;macromolecular complex disassembly;0.0338814730497856!GO:0006631;fatty acid metabolic process;0.0338814730497856!GO:0016251;general RNA polymerase II transcription factor activity;0.0338814730497856!GO:0000030;mannosyltransferase activity;0.0351588053327651!GO:0030140;trans-Golgi network transport vesicle;0.0354227282985582!GO:0006354;RNA elongation;0.035946101744757!GO:0032507;maintenance of cellular protein localization;0.0359819659937296!GO:0042168;heme metabolic process;0.0365150162720829!GO:0031625;ubiquitin protein ligase binding;0.0368413814602517!GO:0051271;negative regulation of cell motility;0.0370283028966044!GO:0005777;peroxisome;0.0378515096758397!GO:0042579;microbody;0.0378515096758397!GO:0043065;positive regulation of apoptosis;0.037913734644932!GO:0022408;negative regulation of cell-cell adhesion;0.0382374047187371!GO:0001527;microfibril;0.0383595005334476!GO:0045941;positive regulation of transcription;0.0386721801531793!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0387288270779729!GO:0045639;positive regulation of myeloid cell differentiation;0.0387566060351291!GO:0006518;peptide metabolic process;0.0393684023809062!GO:0051101;regulation of DNA binding;0.0399956570008415!GO:0044433;cytoplasmic vesicle part;0.0401798842416712!GO:0000209;protein polyubiquitination;0.0408513975979455!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0410257856979803!GO:0007030;Golgi organization and biogenesis;0.0413827323419193!GO:0015631;tubulin binding;0.0414849284627068!GO:0006779;porphyrin biosynthetic process;0.0423188789048695!GO:0033014;tetrapyrrole biosynthetic process;0.0423188789048695!GO:0043068;positive regulation of programmed cell death;0.0433266307022282!GO:0006984;ER-nuclear signaling pathway;0.0443025505372129!GO:0012506;vesicle membrane;0.0449045423352965!GO:0030508;thiol-disulfide exchange intermediate activity;0.0453885048687842!GO:0006007;glucose catabolic process;0.045466308286843!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0459344754912659!GO:0030833;regulation of actin filament polymerization;0.046628972397051!GO:0008601;protein phosphatase type 2A regulator activity;0.0478712123567316!GO:0009112;nucleobase metabolic process;0.0490117704446223!GO:0003923;GPI-anchor transamidase activity;0.0493970004641316!GO:0016255;attachment of GPI anchor to protein;0.0493970004641316!GO:0042765;GPI-anchor transamidase complex;0.0493970004641316!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0498113400698788!GO:0032940;secretion by cell;0.049995194627659
+|sample_id=11376
+|sample_note=
+|sample_sex=female
+|sample_species=Human (Homo sapiens)
+|sample_strain=
+|sample_tissue=breast
+|top_motifs=FOXL1:2.44857995996;TEF:2.2853552035;IKZF1:2.19893417035;NKX2-2,8:2.14044658298;GZF1:2.09667233834;ZNF238:1.88576606873;ESR1:1.81200768955;HES1:1.77862451678;HIF1A:1.71679768298;NKX3-1:1.71075810606;MAFB:1.66734976871;UFEwm:1.66081209283;TAL1_TCF{3,4,12}:1.65069080877;EVI1:1.62682177464;TEAD1:1.54640712617;MYBL2:1.54551132324;ATF6:1.51029087385;SRF:1.48711073098;PAX1,9:1.42345819977;NR3C1:1.40830198765;HMX1:1.33725660084;TFAP4:1.28448297605;TP53:1.27191073317;NFE2L1:1.24775684799;GLI1..3:1.24640844467;HMGA1,2:1.24488678812;NFATC1..3:1.23260929295;HOX{A4,D4}:1.20383971338;XBP1:1.19604638178;LHX3,4:1.11023935361;ZNF423:1.09557734321;SPZ1:1.08658536209;GCM1,2:1.07664342086;MTE{core}:1.05200844295;EBF1:1.0117653197;AR:0.974512950911;HBP1_HMGB_SSRP1_UBTF:0.962156964996;HOX{A6,A7,B6,B7}:0.950220466273;FOXO1,3,4:0.931949798801;TLX1..3_NFIC{dimer}:0.9204347918;ALX4:0.883674424914;MAZ:0.882560494696;GATA4:0.863790675276;SMAD1..7,9:0.821239330496;ARID5B:0.801255370182;RXRA_VDR{dimer}:0.79009699949;KLF4:0.776170043982;RXR{A,B,G}:0.774051995893;HOX{A5,B5}:0.769977522574;TFCP2:0.752030739771;EN1,2:0.742350226853;FOXA2:0.736532082752;NHLH1,2:0.721889413814;DBP:0.674556316918;TFAP2B:0.659276980694;POU6F1:0.608579019805;GTF2I:0.606207018638;NFIX:0.605467212344;GFI1B:0.589057356222;SOX5:0.586892264794;TBP:0.573163740862;MTF1:0.570010798291;NKX2-1,4:0.55687699211;HIC1:0.55164624518;NANOG{mouse}:0.551448666369;STAT1,3:0.541394490901;GTF2A1,2:0.49322586052;bHLH_family:0.488292152415;PAX5:0.452330436835;PAX4:0.430872139174;ZNF148:0.4176967913;HAND1,2:0.412223065942;ZNF384:0.406655102367;HSF1,2:0.375915277822;STAT2,4,6:0.36681509065;NR6A1:0.365785629613;NR1H4:0.363619862158;CDC5L:0.35025701155;MEF2{A,B,C,D}:0.343755499242;HLF:0.33439926547;MZF1:0.306197159137;NKX3-2:0.294511851107;TFAP2{A,C}:0.282629705031;PATZ1:0.255341481287;MYFfamily:0.230439427804;TBX4,5:0.211368264393;NKX2-3_NKX2-5:0.209103238499;AIRE:0.18317528321;MYB:0.17550355233;TGIF1:0.154809980761;NFE2L2:0.14619081072;REST:0.0770022280542;FOX{D1,D2}:0.051961789839;RREB1:0.0485006341055;SREBF1,2:0.0318682794963;ZBTB6:0.00643380881048;T:0.0063176447474;HNF1A:-0.000165590646003;ZIC1..3:-0.00631719377691;XCPE1{core}:-0.0115092459664;HNF4A_NR2F1,2:-0.012320074127;SOX17:-0.0399011332353;FOX{I1,J2}:-0.0409372437185;ADNP_IRX_SIX_ZHX:-0.0426091387732;NFIL3:-0.0521444296317;STAT5{A,B}:-0.0558062618852;PRDM1:-0.066955477804;IRF1,2:-0.0692226222157;TLX2:-0.0764340213984;PAX6:-0.104066300128;POU3F1..4:-0.115409763537;CEBPA,B_DDIT3:-0.117685963967;ELK1,4_GABP{A,B1}:-0.124556653221;PPARG:-0.12994861718;YY1:-0.15155697158;FOXM1:-0.160351528137;FOXD3:-0.169946452486;SOX2:-0.221397076974;BACH2:-0.234700503581;FOSL2:-0.243410936973;DMAP1_NCOR{1,2}_SMARC:-0.247884685711;ZNF143:-0.249510998604;EP300:-0.274580161186;AHR_ARNT_ARNT2:-0.276082972262;FOS_FOS{B,L1}_JUN{B,D}:-0.276646451721;MED-1{core}:-0.279510796979;BPTF:-0.28461445815;EGR1..3:-0.288457085866;PAX2:-0.314802146524;LEF1_TCF7_TCF7L1,2:-0.319087266742;NFE2:-0.333503792291;IKZF2:-0.393331983976;ONECUT1,2:-0.397930087953;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.406160546799;ETS1,2:-0.407097249187;ESRRA:-0.41803044189;JUN:-0.431625437187;ZBTB16:-0.434303748646;FOXP3:-0.439922435403;TOPORS:-0.440427620003;NRF1:-0.449615136847;TFDP1:-0.472577439441;ELF1,2,4:-0.490199962366;RUNX1..3:-0.510428937835;SP1:-0.520112841618;GFI1:-0.523788238136;ZFP161:-0.527306745631;CREB1:-0.531216110818;POU5F1:-0.532283295239;PDX1:-0.545025490806;SPI1:-0.550827995374;ATF5_CREB3:-0.55667642355;FOXP1:-0.561335393706;SPIB:-0.574519704743;PRRX1,2:-0.577959039425;NKX6-1,2:-0.587001778223;RBPJ:-0.595597872865;OCT4_SOX2{dimer}:-0.60688909453;RFX1:-0.625118372794;PAX8:-0.640268368919;NFKB1_REL_RELA:-0.668862010667;VSX1,2:-0.674570618043;NR5A1,2:-0.685437660443;IRF7:-0.706770307954;ATF4:-0.716411170048;RFX2..5_RFXANK_RFXAP:-0.750559267637;POU1F1:-0.768647654845;CDX1,2,4:-0.774855162446;GATA6:-0.775039729236;PITX1..3:-0.79152045586;ATF2:-0.794399077545;BREu{core}:-0.800149932141;CRX:-0.806533678424;FOXN1:-0.808812782626;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.857052927489;RORA:-0.884331290882;SNAI1..3:-0.900620053797;ZEB1:-0.904700153275;HOXA9_MEIS1:-0.951037883762;NFY{A,B,C}:-0.98611050117;E2F1..5:-1.05189777516;LMO2:-1.11536538557;CUX2:-1.12017271134;SOX{8,9,10}:-1.13079009298;ALX1:-1.1574039618;PAX3,7:-1.19858572485;NANOG:-1.2489285114;FOX{F1,F2,J1}:-1.26504587995;MYOD1:-1.42740110229;FOXQ1:-1.4581774156;POU2F1..3:-1.61077801631;PBX1:-1.94160340956
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11376-118A8;search_select_hide=table117:FF:11376-118A8
 }}

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FF:11376-118A8: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 17:55, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0