FF:11762-123H7: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (23 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005043 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008561;DRR009433;DRZ000858;DRZ002243;DRZ012208;DRZ013593 | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000274 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor3.CNhs12378.11762-123H7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor3.CNhs12378.11762-123H7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor3.CNhs12378.11762-123H7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor3.CNhs12378.11762-123H7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor3.CNhs12378.11762-123H7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11762-123H7 | |id=FF:11762-123H7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000274 | ||
|is_obsolete= | |||
|library_id=CNhs12378 | |||
|library_id_phase_based=2:CNhs12378 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11762 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11762 | |||
|name=mesenchymal precursor cell - ovarian cancer metastasis, donor3 | |name=mesenchymal precursor cell - ovarian cancer metastasis, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12378,LSID914,release011,COMPLETED | |profile_hcage=CNhs12378,LSID914,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.425694474769589,0,-0.115762719554553,0.170820735097779,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18950630973628,0,0,0,0,0,0.414441518752644,0,0,-0.0188411513151435,0,0,0,0,0,0,0,0,0,0.114115438463719,0,0,-0.0172289053294012,0.114115438463719,0.342829320084708,0,0,0,0,0,0,0.056584685206646,0,0,0,0,0,0.0607951148206197,0.114115438463719,0.1821143955547,0,0,0.0167718112506218,0,0,0,0,0,0,0,0,0,0,0.0607951148206197,0,0,0,0,0,0,-0.0148528805404093,0,0,0,0,0,0,0.0607951148206197,0.0303975574103099,0,0,-0.137778810205543,0.206768666529838,0,0.398387290927649,0.0874552766421693,0.204399588044458,-0.0980353512377064,0.208940595918546,0,0,0,0.0607951148206197,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0155738876029806,0,0,0,-0.00818233414688357,-0.124531688375341,0,0,0.0769900033563934,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0.204399588044458,0,0.0607951148206197,0,0.0607951148206197,0,0,0.398387290927649,0,0,0.200458369424488,0,-0.161950502613449,-0.0827200277028522,0.0303975574103099,0,0.188119795500228,0,0.0607951148206197,0,0,0.0607951148206197,0,0.0607951148206197,0.161599412638961,0,-0.067324752131945,0,0.111186861049646,0,0,0.0607951148206197,0,0,0.385317083023319,0,0.0375969517263783,0.0457711773863505,0,0,0,0,0.242923854644886,0,-0.060084368973121,0.12167941972104,0.226025656607246,0.0173868365252745,0.0139904559282397,0,0,0,0.217213636084284,-0.48637382972928,0,0,0.0342880063174059,-0.0113986827516968,0,0,1.20185834727918,0,0.447644603811057,0.182366037645538,0,-0.0305630250767878,0,0,0,0,0,0,0,0,0,0,0,0.707705882436608,-0.0148528805404093,0.0472712739055662,0,0,0.0101559197495561,0.0776524303736728,0,0.023647899783083,0.0743510887534859,0.0102344693755854,0.0122500753032376,-0.171533321427822,0.0273214085460287,0.331650751608351,-0.0131426103632072,-0.0162176742618825,-0.149113507340282,0.19542747071357,0.396030785306128,0.087224583921773,0.0940291187073918,0.0500544462990121,-0.0230998639408088,-0.100445517764026,-0.0336754817964568,0.328624176824067,0.0267261650194872,0,0,0,-0.00109897306473794,0,-0.231510289154051,-0.0664046887249973,-0.0378017551010863,0.076253635732751,-0.0816887070888525,0.034250091703103,-0.0293522707244673,0.184346057070948,0.0933273245687345,-0.00560237103255835,0.682599612300206,0,0.398387290927649,0.020419940159877,-0.0719024753712376,0.10403872519495,-0.24433005255758,0,-0.171841745672421,0.243791455061191,0,0.108900085510182,-0.0502780470066184,0.0607951148206197,0.423710025751776,-0.086910574482331,0,0,0,0.000668316393600985,0,-0.120580298971691,-0.0691773842599965,-0.172060446734925,0,-0.0622381496708235,0.0313778851399555,-0.125871420310232,0,-0.0579917024261098,0.0609730178124637,0,-0.0678680829604278,0,0.0424911627787034,0.407828434751008,0.124615539451423,0.352742218239057,0.0023482880087945,-0.16172627831514,-0.074340173132062,-0.137778810205543,-0.0850507377301748,0.0472338505374135,0.44387825118832,0,0.28298726162652,0.376177338277794,-0.114811625350712,-0.134455793732304,0.0607951148206197,-0.0214037099292699,0,-0.0991801731427318,0,0.0264824606825703,0.0103300259920891,-0.378494259760067,-0.08668549258336,0.0112981925486804,0.0618589132573848,1.48514807898178,0.0607951148206197,0.143383612950523,0,0,0.0929904996761382,0.109112866640522,0.143611075668515,0.0978781077095658,0,0.197360023419162,0,0,0.327553141618761,0.0766596783741708,0,-0.121864359080206,-0.138888155443226,-0.156578796485242,-0.115971073434934,0,0,0.150805745604502,0,0.0607951148206197,0.598890595072068,0.114115438463719,0.0435578279761258,0.216988417283414,0,-0.051565090222396,0,0,0.134607950173384,0,0.00152544647182655,0,0.0607951148206197,0.135605409994369,0.114096319315847,0,0.0303975574103099,0.31213571613856,0.050667637636776,0,0,0,0,0.011991298991952,0,0,-0.279582928412164,0.0435539607112012,0,-0.0107092629291839,0,0,0,1.01351014449377,0,0.079456975573608,0,0.568745655460591,0.903331496860998,0.0654534962262441,-0.12301741567642,0,0,0,0,0.316281681110134,-0.041637149455763,0.0607951148206197,0.0297367061413291,0,0,0,0,-0.0253458749685917,0,0.0607951148206197,0,0.0303975574103099,-0.057730457053664,-0.12108260619313,0,0,0,0.357086077016473,0,0,0,0.00406548158834268,-0.0933350014203833,0,0.0180649626068571,0.412109931699146,0,0.0380484033208477,-0.0207867647262217,0,-0.181555685636233,0.217237550913759,0.633372519820295,0,0,-0.261347131789888,0,0.0807997063194805,0.266878132498975,-0.0529297593451453,0.0607951148206197,0.0303975574103099,0,0,0,0,0,0.114115438463719,0.128514807684952,0.0303975574103099,0,0,0,0,0,0,0,0,0,0,0.127806497198141,0.151133526352267,0.243357583010778,0,0,0,0,0,0,0.706005694264241,-0.0905049551654215,0,0,0,0,0,0,0,0,0.0409734753574593,0,0,0,0,0,0.1821143955547,0,0.0607951148206197,0,0,0.341641470195557,0,0,-0.115762719554553,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.062523971214828,-0.243738709681138,0,0,0,0,0,0,0,-0.0314757151953129,0,0,0,0,0.000231064754741564,0,0,0,-0.0440012699685367,0,0.425694474769589,0,0.0607951148206197,0,0.0303975574103099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15606785806928,0,0,0,0.102969179986928,0.133718315569295,0.225191899047792,0,0,0,0.1560718783262,0,0,0,0,0,0,0.0257172952033323,0.0834415970478421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.030970370074605,0,0,0,0,0,0,0,0.414441518752644,0,0,-0.0616352523902163,0,0,0,0,0.0265632589107396,0,0.244421947022059,0.574830791441297,0.0511234911084828,0,0,0,0.22560777930085,0,0,0.0567634326748437,0.114115438463719,0.245358328719658,0,0,0,0,0,0,0,0,0.114115438463719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18950630973628,0,0.0607951148206197,0,0,0,0,0,0,0,0,0,0,0.0570577192318595,0,0,0,0,0,0,0.0570577192318595,0,0,0,0,0,0,0,0.114115438463719,0.0570577192318595,0,0,0,0,0,0,0.0230463559564428,0,0,0.0607951148206197,0,0,0,0,0,0,0,0,0,0.0570577192318595,0,0,0,0,0,0,0,0,0.0607951148206197,0.26281085181607,0,0,0,0.450254922277716,0.114115438463719,0,0,0,0,0,0.0607951148206197,0,0.161599412638961,0,0,0,0,0,0,0,0,0,0,0,0.114115438463719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114115438463719,0,0,0,-0.0339327463292958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0125730395815655,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379572491930309,0,0,0,0,0.32385900996018,0,0,0,0,0,0,0.980670613251053,-0.00662879148237275,0,0,0.0607951148206197,0,0,0,0,0,0,0,0,0,0,0.450278518771547,0,0,0.0234020682392,0,0,0,0,0,0,0,0,0,0,0,0,-0.000525064329506698,0,0,0,0,0,0,0,0,0,0,0.113169370413292,0,0,0,0,0,0,0,0,2.55861111544863,0,0,0,0,0,0,0.0303975574103099,0,0,0,0,0,0,0.0607951148206197,0,0,0,0,0,0,0,-0.00983956269874138,-0.124531688375341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0303975574103099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.016083054478657,0.0303975574103099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607951148206197,0,0,0,0,0,0,0,0,0,0,0,0,0.0273607968591837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0303975574103099,0.0303975574103099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114115438463719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114115438463719,0,0,0,0,0,0,0.494234869435006,0,0,0,0,0,0,0,0,0.114115438463719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0303975574103099,0,0,0,0,0.0570577192318595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0311477752059612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0303975574103099,0.102199794022229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0303975574103099,-0.0176830358878546,0,0,0.0303975574103099,0,0,0,0,-0.00858055853328214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0303975574103099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0704832079738455,0,0,0,0,0,0,0,0,0,0.161599412638961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0343734397987407,0,0,0,0,0,0,0.0303975574103099,0,0,0,0,0,0.0570577192318595,0,0,0,0,0,0.0167718112506218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0188411513151435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0303975574103099,0,0,0,-0.0499379825215864,0,0,0,0,0,0,0,0,0,0,0.0158076277040521,0.121678791505389,0,0,0,0.0353996392810138,0,0.0607951148206197,0,0,0,0,0,0,0,0,0,0,0,0.186414703321731,0,0,0.0718279699866028,0,-0.0488679929701364,0,0,0,0,0,0,0.00837723692832545,0,0,0,0,0,0,0,0,0,0,0,0.0607951148206197,0,0.00051892312744547,0,0,0,0,0,0,0.0607951148206197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0367145123121883,0,0.229101641528916,-0.153717105511237,0,0.114115438463719,0.165930639407158,0,0.0607951148206197,0.114115438463719,0,0,-0.174992895090299,0.166396042852758,0.114115438463719,0,0,0,0,0,0,0,0,0,0,0.342829320084708,0,0,0.0874552766421693,0.114115438463719,0,0,-0.0568589461625992,0.200839123175601,0.31213571613856,0.407116716621592,0,0,-0.114257759252369,0,0,0,0.0181560310901319 | |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=51.22095 | |rna_weight_ug=51.22095 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.64022870801134e-205!GO:0005737;cytoplasm;7.65170667382271e-197!GO:0043226;organelle;6.34243049059078e-154!GO:0043229;intracellular organelle;1.70211593132341e-153!GO:0043231;intracellular membrane-bound organelle;2.23516800913246e-153!GO:0043227;membrane-bound organelle;4.5099693506845e-153!GO:0044444;cytoplasmic part;9.30952535222176e-145!GO:0044422;organelle part;2.20726749713794e-115!GO:0044446;intracellular organelle part;5.80247005363577e-114!GO:0005515;protein binding;1.39280505227193e-75!GO:0032991;macromolecular complex;1.62176346807929e-75!GO:0044238;primary metabolic process;1.93770256702986e-69!GO:0044237;cellular metabolic process;8.2712532764379e-68!GO:0030529;ribonucleoprotein complex;7.95005339569732e-67!GO:0043170;macromolecule metabolic process;1.85208576864956e-63!GO:0005739;mitochondrion;1.48317317379239e-55!GO:0031090;organelle membrane;1.8918785379222e-55!GO:0043233;organelle lumen;1.8918785379222e-55!GO:0031974;membrane-enclosed lumen;1.8918785379222e-55!GO:0019538;protein metabolic process;5.55564980245425e-51!GO:0003723;RNA binding;6.32792903411926e-50!GO:0044428;nuclear part;7.2334389127616e-50!GO:0033036;macromolecule localization;1.70639583641326e-46!GO:0015031;protein transport;2.5433714915869e-46!GO:0044260;cellular macromolecule metabolic process;2.9981455758443e-45!GO:0045184;establishment of protein localization;1.7996740916353e-44!GO:0044267;cellular protein metabolic process;3.51903046091282e-44!GO:0008104;protein localization;6.11894035092034e-44!GO:0005840;ribosome;3.06610093360844e-42!GO:0005634;nucleus;6.0140628645286e-42!GO:0016043;cellular component organization and biogenesis;6.57032145290646e-42!GO:0006412;translation;1.05324017762021e-40!GO:0044429;mitochondrial part;2.96634678350097e-39!GO:0005829;cytosol;3.15092821051623e-39!GO:0009058;biosynthetic process;6.87034149495519e-39!GO:0043234;protein complex;5.79095407993273e-38!GO:0003735;structural constituent of ribosome;1.28490740519727e-37!GO:0009059;macromolecule biosynthetic process;3.66595208861565e-36!GO:0031967;organelle envelope;3.66621130110236e-36!GO:0031975;envelope;9.01507494679319e-36!GO:0046907;intracellular transport;2.67857516713731e-35!GO:0006396;RNA processing;1.10601416854685e-33!GO:0033279;ribosomal subunit;3.30978694446701e-33!GO:0044249;cellular biosynthetic process;1.60630682009106e-31!GO:0031981;nuclear lumen;9.54125309913839e-30!GO:0043283;biopolymer metabolic process;4.61051211904084e-29!GO:0006886;intracellular protein transport;5.69647326080156e-29!GO:0016071;mRNA metabolic process;1.01020824683807e-28!GO:0008380;RNA splicing;9.96350222772628e-28!GO:0005783;endoplasmic reticulum;1.04372614097178e-27!GO:0005740;mitochondrial envelope;3.80778405741096e-27!GO:0031966;mitochondrial membrane;1.09907644031505e-25!GO:0006397;mRNA processing;3.70016534988988e-25!GO:0012505;endomembrane system;4.66849262351911e-25!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.02250893448245e-24!GO:0010467;gene expression;1.32709507661677e-24!GO:0065003;macromolecular complex assembly;4.45719943672764e-24!GO:0019866;organelle inner membrane;6.47339371363986e-24!GO:0051649;establishment of cellular localization;1.44304101539057e-23!GO:0051641;cellular localization;2.35818975977873e-23!GO:0005743;mitochondrial inner membrane;1.28940516791709e-22!GO:0006119;oxidative phosphorylation;1.30582229209394e-22!GO:0005794;Golgi apparatus;3.2789056711594e-22!GO:0022607;cellular component assembly;2.67622051035646e-21!GO:0044445;cytosolic part;6.34888180773029e-21!GO:0006996;organelle organization and biogenesis;7.16784949135872e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.3272755381119e-20!GO:0006457;protein folding;3.93512898048544e-20!GO:0044455;mitochondrial membrane part;1.13629428693458e-19!GO:0044432;endoplasmic reticulum part;3.37738409911278e-19!GO:0048770;pigment granule;3.48218137356517e-19!GO:0042470;melanosome;3.48218137356517e-19!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.4872279275725e-19!GO:0005681;spliceosome;7.78443019474365e-19!GO:0043228;non-membrane-bound organelle;1.07928167974319e-18!GO:0043232;intracellular non-membrane-bound organelle;1.07928167974319e-18!GO:0005654;nucleoplasm;4.56232454712006e-18!GO:0015934;large ribosomal subunit;1.62421229192791e-17!GO:0016462;pyrophosphatase activity;2.28207467157997e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.98759657111741e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;4.52135603560647e-17!GO:0015935;small ribosomal subunit;1.26522060303045e-16!GO:0005746;mitochondrial respiratory chain;1.47760600350174e-16!GO:0016192;vesicle-mediated transport;2.0384426034289e-16!GO:0008134;transcription factor binding;3.87571914630506e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.13390370105548e-16!GO:0017111;nucleoside-triphosphatase activity;4.48694617917312e-16!GO:0048193;Golgi vesicle transport;4.48694617917312e-16!GO:0000166;nucleotide binding;5.75154125609004e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.52796552228451e-15!GO:0043285;biopolymer catabolic process;1.60305240950399e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;3.38382266258434e-15!GO:0030163;protein catabolic process;4.70701956877745e-15!GO:0044265;cellular macromolecule catabolic process;4.72544337032722e-15!GO:0044451;nucleoplasm part;4.8911363426371e-15!GO:0050136;NADH dehydrogenase (quinone) activity;5.79540373798766e-15!GO:0003954;NADH dehydrogenase activity;5.79540373798766e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.79540373798766e-15!GO:0019941;modification-dependent protein catabolic process;6.39225794309955e-15!GO:0043632;modification-dependent macromolecule catabolic process;6.39225794309955e-15!GO:0044257;cellular protein catabolic process;6.59868526814e-15!GO:0009057;macromolecule catabolic process;8.34211163534773e-15!GO:0031980;mitochondrial lumen;8.60176397953298e-15!GO:0005759;mitochondrial matrix;8.60176397953298e-15!GO:0006511;ubiquitin-dependent protein catabolic process;8.94568118325441e-15!GO:0022618;protein-RNA complex assembly;3.21797053652413e-14!GO:0051186;cofactor metabolic process;3.53913166550222e-14!GO:0051082;unfolded protein binding;5.77627684918875e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.82149953282306e-14!GO:0006512;ubiquitin cycle;1.13050994639732e-13!GO:0016874;ligase activity;1.42773685275785e-13!GO:0044248;cellular catabolic process;1.52143458287898e-13!GO:0006605;protein targeting;1.62224506856722e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.74421221025748e-13!GO:0012501;programmed cell death;2.44913469506008e-13!GO:0030964;NADH dehydrogenase complex (quinone);3.15960451039181e-13!GO:0045271;respiratory chain complex I;3.15960451039181e-13!GO:0005747;mitochondrial respiratory chain complex I;3.15960451039181e-13!GO:0042775;organelle ATP synthesis coupled electron transport;3.36554468381625e-13!GO:0042773;ATP synthesis coupled electron transport;3.36554468381625e-13!GO:0005789;endoplasmic reticulum membrane;6.69271291049464e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.1155826002048e-13!GO:0043412;biopolymer modification;8.06120776870402e-13!GO:0006915;apoptosis;8.11202848960831e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.76852917466777e-13!GO:0005793;ER-Golgi intermediate compartment;1.37622033075637e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.1056440218416e-12!GO:0005730;nucleolus;3.80067949464905e-12!GO:0008219;cell death;4.00040763339214e-12!GO:0016265;death;4.00040763339214e-12!GO:0006464;protein modification process;4.04221621692844e-12!GO:0032553;ribonucleotide binding;6.60414472409575e-12!GO:0032555;purine ribonucleotide binding;6.60414472409575e-12!GO:0005761;mitochondrial ribosome;8.1172966018127e-12!GO:0000313;organellar ribosome;8.1172966018127e-12!GO:0008135;translation factor activity, nucleic acid binding;9.97886011359176e-12!GO:0005768;endosome;1.16075639291838e-11!GO:0017076;purine nucleotide binding;1.24281488130845e-11!GO:0006259;DNA metabolic process;1.75774023239732e-11!GO:0009055;electron carrier activity;2.88614411723254e-11!GO:0048523;negative regulation of cellular process;3.07302914528306e-11!GO:0006732;coenzyme metabolic process;4.63746258255011e-11!GO:0007049;cell cycle;2.44298044275897e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;2.8014004038476e-10!GO:0000375;RNA splicing, via transesterification reactions;2.8014004038476e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.8014004038476e-10!GO:0044431;Golgi apparatus part;3.96539367334097e-10!GO:0003924;GTPase activity;7.03635204011088e-10!GO:0005635;nuclear envelope;7.07114641631309e-10!GO:0003712;transcription cofactor activity;8.10194764572044e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.08778527596899e-10!GO:0008565;protein transporter activity;9.95341840425314e-10!GO:0009150;purine ribonucleotide metabolic process;1.01269302188824e-09!GO:0009259;ribonucleotide metabolic process;1.18612700571371e-09!GO:0006163;purine nucleotide metabolic process;1.19957673520217e-09!GO:0048519;negative regulation of biological process;1.53511091893929e-09!GO:0043069;negative regulation of programmed cell death;3.74624936766005e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.8205513754948e-09!GO:0016023;cytoplasmic membrane-bound vesicle;4.04992446939493e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.19318596079285e-09!GO:0043067;regulation of programmed cell death;4.30561216097189e-09!GO:0031988;membrane-bound vesicle;4.45058995171454e-09!GO:0003743;translation initiation factor activity;4.60072293304173e-09!GO:0043687;post-translational protein modification;4.80417028380347e-09!GO:0030120;vesicle coat;4.87771414786793e-09!GO:0030662;coated vesicle membrane;4.87771414786793e-09!GO:0006164;purine nucleotide biosynthetic process;5.16098324918825e-09!GO:0048475;coated membrane;5.84308032195108e-09!GO:0030117;membrane coat;5.84308032195108e-09!GO:0006413;translational initiation;6.59988942419844e-09!GO:0042981;regulation of apoptosis;7.2179812364775e-09!GO:0009056;catabolic process;7.80075185311379e-09!GO:0005788;endoplasmic reticulum lumen;8.09539532945957e-09!GO:0006888;ER to Golgi vesicle-mediated transport;8.09539532945957e-09!GO:0003676;nucleic acid binding;8.11509961790223e-09!GO:0015986;ATP synthesis coupled proton transport;9.9572987144673e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.9572987144673e-09!GO:0031965;nuclear membrane;1.00557105260737e-08!GO:0043066;negative regulation of apoptosis;1.07932476313608e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.08142043223214e-08!GO:0006913;nucleocytoplasmic transport;1.10832459940473e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.30883818269718e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.38604195290042e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.38604195290042e-08!GO:0006461;protein complex assembly;1.40050143236866e-08!GO:0008639;small protein conjugating enzyme activity;1.61802715130662e-08!GO:0009260;ribonucleotide biosynthetic process;1.61802715130662e-08!GO:0009060;aerobic respiration;1.83353992628882e-08!GO:0009141;nucleoside triphosphate metabolic process;1.8370851763102e-08!GO:0006446;regulation of translational initiation;1.95211054093309e-08!GO:0016491;oxidoreductase activity;1.98332617588248e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.24475551664497e-08!GO:0051169;nuclear transport;2.26478432493081e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.62926348830409e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.62926348830409e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.71823911491877e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.71823911491877e-08!GO:0005524;ATP binding;2.81197117691915e-08!GO:0016070;RNA metabolic process;2.81813930252692e-08!GO:0004842;ubiquitin-protein ligase activity;3.60560656812155e-08!GO:0000139;Golgi membrane;3.96643047048221e-08!GO:0019787;small conjugating protein ligase activity;3.99586360729105e-08!GO:0032559;adenyl ribonucleotide binding;4.44323344782098e-08!GO:0016604;nuclear body;5.10975059007915e-08!GO:0044440;endosomal part;6.22536625803408e-08!GO:0010008;endosome membrane;6.22536625803408e-08!GO:0005773;vacuole;6.4550276090515e-08!GO:0031982;vesicle;6.72513954057533e-08!GO:0030554;adenyl nucleotide binding;9.50037232499412e-08!GO:0031410;cytoplasmic vesicle;9.69629476062571e-08!GO:0019829;cation-transporting ATPase activity;9.97620303375754e-08!GO:0045333;cellular respiration;1.16960351578148e-07!GO:0046034;ATP metabolic process;1.26358946171378e-07!GO:0006916;anti-apoptosis;1.32872655673373e-07!GO:0017038;protein import;1.43017408039204e-07!GO:0022402;cell cycle process;1.43017408039204e-07!GO:0016881;acid-amino acid ligase activity;1.51703985267557e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.59490681248604e-07!GO:0042254;ribosome biogenesis and assembly;1.95807453013838e-07!GO:0006754;ATP biosynthetic process;2.09251096487877e-07!GO:0006753;nucleoside phosphate metabolic process;2.09251096487877e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.30919195638942e-07!GO:0044453;nuclear membrane part;2.36402329458153e-07!GO:0005770;late endosome;2.85411355244611e-07!GO:0006099;tricarboxylic acid cycle;3.30450349314267e-07!GO:0046356;acetyl-CoA catabolic process;3.30450349314267e-07!GO:0000074;regulation of progression through cell cycle;3.38648373781832e-07!GO:0003714;transcription corepressor activity;4.45644121150842e-07!GO:0051726;regulation of cell cycle;4.45644121150842e-07!GO:0051188;cofactor biosynthetic process;5.07139863788601e-07!GO:0051246;regulation of protein metabolic process;5.2039578519445e-07!GO:0005525;GTP binding;5.72426526115222e-07!GO:0005839;proteasome core complex (sensu Eukaryota);6.35579077388162e-07!GO:0051187;cofactor catabolic process;8.25098023371659e-07!GO:0031252;leading edge;1.12676996910118e-06!GO:0016787;hydrolase activity;1.19643601961112e-06!GO:0000323;lytic vacuole;1.20218610246258e-06!GO:0005764;lysosome;1.20218610246258e-06!GO:0050794;regulation of cellular process;1.3978308254082e-06!GO:0007005;mitochondrion organization and biogenesis;1.51666683391981e-06!GO:0006366;transcription from RNA polymerase II promoter;1.59110937818719e-06!GO:0008654;phospholipid biosynthetic process;1.60268137357782e-06!GO:0045786;negative regulation of progression through cell cycle;1.68024809040508e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.70761336387429e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.79543733614105e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.81742502902753e-06!GO:0005798;Golgi-associated vesicle;1.83127825513273e-06!GO:0016607;nuclear speck;1.83127825513273e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.83144859513355e-06!GO:0016564;transcription repressor activity;1.97094815986847e-06!GO:0006084;acetyl-CoA metabolic process;2.16559917633976e-06!GO:0016853;isomerase activity;2.35282661593065e-06!GO:0006974;response to DNA damage stimulus;2.49614515707247e-06!GO:0042623;ATPase activity, coupled;2.55696280727171e-06!GO:0051789;response to protein stimulus;2.55696280727171e-06!GO:0006986;response to unfolded protein;2.55696280727171e-06!GO:0009109;coenzyme catabolic process;2.56544665700499e-06!GO:0006399;tRNA metabolic process;2.59872795874404e-06!GO:0006793;phosphorus metabolic process;2.70714698034891e-06!GO:0006796;phosphate metabolic process;2.70714698034891e-06!GO:0016887;ATPase activity;3.16588202644543e-06!GO:0005769;early endosome;3.73910310815419e-06!GO:0004298;threonine endopeptidase activity;4.48783938805418e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.98287028339638e-06!GO:0004812;aminoacyl-tRNA ligase activity;4.98287028339638e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.98287028339638e-06!GO:0043038;amino acid activation;6.01186457331133e-06!GO:0006418;tRNA aminoacylation for protein translation;6.01186457331133e-06!GO:0043039;tRNA aminoacylation;6.01186457331133e-06!GO:0045259;proton-transporting ATP synthase complex;6.37499167160339e-06!GO:0032561;guanyl ribonucleotide binding;6.77737850835108e-06!GO:0019001;guanyl nucleotide binding;6.77737850835108e-06!GO:0016740;transferase activity;6.81166951646261e-06!GO:0030133;transport vesicle;7.79438443264956e-06!GO:0006091;generation of precursor metabolites and energy;9.64834709178195e-06!GO:0006613;cotranslational protein targeting to membrane;1.1005404238973e-05!GO:0051170;nuclear import;1.54227833746001e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.55277103720713e-05!GO:0005905;coated pit;1.70576277819041e-05!GO:0008026;ATP-dependent helicase activity;1.70642222183312e-05!GO:0009117;nucleotide metabolic process;1.88267806272721e-05!GO:0009108;coenzyme biosynthetic process;1.92092089291518e-05!GO:0016310;phosphorylation;2.01885504901433e-05!GO:0004386;helicase activity;2.05042104255104e-05!GO:0006752;group transfer coenzyme metabolic process;2.13330393464687e-05!GO:0016859;cis-trans isomerase activity;2.21934134616546e-05!GO:0006606;protein import into nucleus;2.34540477640139e-05!GO:0065002;intracellular protein transport across a membrane;2.39282657986992e-05!GO:0030867;rough endoplasmic reticulum membrane;2.62756305578557e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;2.62756305578557e-05!GO:0048522;positive regulation of cellular process;2.78893637606579e-05!GO:0005643;nuclear pore;3.07965209336572e-05!GO:0007243;protein kinase cascade;3.0897368119321e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.10437913466097e-05!GO:0033116;ER-Golgi intermediate compartment membrane;3.24619478772789e-05!GO:0031968;organelle outer membrane;3.41949059153115e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.96902759950358e-05!GO:0000245;spliceosome assembly;4.08197593144058e-05!GO:0008361;regulation of cell size;4.08197593144058e-05!GO:0045454;cell redox homeostasis;4.60230930251241e-05!GO:0006281;DNA repair;4.85522787850593e-05!GO:0019867;outer membrane;5.54812025545799e-05!GO:0031324;negative regulation of cellular metabolic process;5.64515289297635e-05!GO:0032446;protein modification by small protein conjugation;6.00463318276693e-05!GO:0006323;DNA packaging;6.2430224248401e-05!GO:0000278;mitotic cell cycle;6.2430224248401e-05!GO:0016049;cell growth;6.95298099194188e-05!GO:0044262;cellular carbohydrate metabolic process;7.60307340672052e-05!GO:0051427;hormone receptor binding;8.00447342341161e-05!GO:0016567;protein ubiquitination;8.08048118443307e-05!GO:0015630;microtubule cytoskeleton;8.70097903029319e-05!GO:0005791;rough endoplasmic reticulum;8.71688159262044e-05!GO:0005762;mitochondrial large ribosomal subunit;8.71688159262044e-05!GO:0000315;organellar large ribosomal subunit;8.71688159262044e-05!GO:0005667;transcription factor complex;9.13120489091756e-05!GO:0006612;protein targeting to membrane;9.28509640260579e-05!GO:0043623;cellular protein complex assembly;0.00010287490851912!GO:0030036;actin cytoskeleton organization and biogenesis;0.000103379817431253!GO:0050789;regulation of biological process;0.000108047660643084!GO:0000151;ubiquitin ligase complex;0.000115334874337888!GO:0007264;small GTPase mediated signal transduction;0.000116151908707659!GO:0016563;transcription activator activity;0.000116682691796372!GO:0016126;sterol biosynthetic process;0.0001231424250859!GO:0016044;membrane organization and biogenesis;0.000125651749160235!GO:0003697;single-stranded DNA binding;0.000133461462092601!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000135462112235071!GO:0051276;chromosome organization and biogenesis;0.000144665375526119!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000150412884071529!GO:0030659;cytoplasmic vesicle membrane;0.0001567592395084!GO:0035257;nuclear hormone receptor binding;0.0001567592395084!GO:0046930;pore complex;0.000162610155280879!GO:0006364;rRNA processing;0.000164827133333983!GO:0006403;RNA localization;0.000176093246481233!GO:0050657;nucleic acid transport;0.000204705612516383!GO:0051236;establishment of RNA localization;0.000204705612516383!GO:0050658;RNA transport;0.000204705612516383!GO:0005741;mitochondrial outer membrane;0.000205598244215028!GO:0008610;lipid biosynthetic process;0.0002363844898109!GO:0008250;oligosaccharyl transferase complex;0.000255273836749943!GO:0016072;rRNA metabolic process;0.000256717790235671!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.000257456519570447!GO:0046474;glycerophospholipid biosynthetic process;0.000262769904216019!GO:0001558;regulation of cell growth;0.00027440133054295!GO:0043566;structure-specific DNA binding;0.000306091799261441!GO:0043021;ribonucleoprotein binding;0.000325452979198212!GO:0004576;oligosaccharyl transferase activity;0.000326519741304913!GO:0005885;Arp2/3 protein complex;0.000327708386348485!GO:0005813;centrosome;0.00033096961983363!GO:0065004;protein-DNA complex assembly;0.000335447018266516!GO:0009892;negative regulation of metabolic process;0.000336903991219931!GO:0005048;signal sequence binding;0.000339140711810099!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000363019063651714!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000371536240951739!GO:0030118;clathrin coat;0.000371635472833386!GO:0044433;cytoplasmic vesicle part;0.000378841666265264!GO:0046467;membrane lipid biosynthetic process;0.000380849314897394!GO:0030663;COPI coated vesicle membrane;0.000382428711504559!GO:0030126;COPI vesicle coat;0.000382428711504559!GO:0016568;chromatin modification;0.000385267181728258!GO:0003713;transcription coactivator activity;0.000389810016584349!GO:0009719;response to endogenous stimulus;0.000416186130154091!GO:0003724;RNA helicase activity;0.000431620989902726!GO:0018196;peptidyl-asparagine modification;0.000528990220184804!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000528990220184804!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000539136192687712!GO:0007050;cell cycle arrest;0.000650817018893995!GO:0030658;transport vesicle membrane;0.000663277674162541!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000692608662167995!GO:0030029;actin filament-based process;0.000700252630457331!GO:0016779;nucleotidyltransferase activity;0.000850707584599028!GO:0051920;peroxiredoxin activity;0.000871808280921328!GO:0005815;microtubule organizing center;0.000892136298498363!GO:0030137;COPI-coated vesicle;0.000933887438107675!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000938906438491583!GO:0046489;phosphoinositide biosynthetic process;0.000946142625625346!GO:0031901;early endosome membrane;0.000963576885454218!GO:0012506;vesicle membrane;0.000964907872496586!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00102531387075494!GO:0030176;integral to endoplasmic reticulum membrane;0.00103760786181906!GO:0048518;positive regulation of biological process;0.00109671269181822!GO:0019843;rRNA binding;0.0011078929006864!GO:0031418;L-ascorbic acid binding;0.00117882188446529!GO:0000314;organellar small ribosomal subunit;0.00118774302902994!GO:0005763;mitochondrial small ribosomal subunit;0.00118774302902994!GO:0006333;chromatin assembly or disassembly;0.0011958847076163!GO:0006891;intra-Golgi vesicle-mediated transport;0.00120885626107468!GO:0030119;AP-type membrane coat adaptor complex;0.00125086355540006!GO:0016197;endosome transport;0.00135911241809409!GO:0006695;cholesterol biosynthetic process;0.00142009069827536!GO:0048471;perinuclear region of cytoplasm;0.00144807390447477!GO:0005694;chromosome;0.00151053286879228!GO:0048468;cell development;0.00151053286879228!GO:0006979;response to oxidative stress;0.00152225656423188!GO:0030027;lamellipodium;0.00154554245346651!GO:0008092;cytoskeletal protein binding;0.00159323645221451!GO:0045045;secretory pathway;0.00160758779844466!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00163090358388151!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0017006212141934!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0017006212141934!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0017006212141934!GO:0007010;cytoskeleton organization and biogenesis;0.00184355914390626!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00189031124174412!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00189031124174412!GO:0001726;ruffle;0.0019741063951774!GO:0006509;membrane protein ectodomain proteolysis;0.00203706495761244!GO:0033619;membrane protein proteolysis;0.00203706495761244!GO:0016481;negative regulation of transcription;0.00205492479993194!GO:0019899;enzyme binding;0.00219353586610256!GO:0051028;mRNA transport;0.00235950346581631!GO:0030660;Golgi-associated vesicle membrane;0.00236141969990444!GO:0006839;mitochondrial transport;0.00246301852641837!GO:0030131;clathrin adaptor complex;0.00247924931517974!GO:0043284;biopolymer biosynthetic process;0.00247924931517974!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00251999798170336!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00264767232795654!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00275917817241267!GO:0030132;clathrin coat of coated pit;0.00280114554891805!GO:0006650;glycerophospholipid metabolic process;0.00283389404158526!GO:0048500;signal recognition particle;0.0028387983959149!GO:0030134;ER to Golgi transport vesicle;0.0030483288666037!GO:0042802;identical protein binding;0.0030483288666037!GO:0043681;protein import into mitochondrion;0.00314875499272825!GO:0007040;lysosome organization and biogenesis;0.00320814194028569!GO:0015631;tubulin binding;0.0032296990552882!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00341879792862203!GO:0032940;secretion by cell;0.00346580756580458!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00349929201667273!GO:0005586;collagen type III;0.00350478307482172!GO:0051301;cell division;0.00359141539149883!GO:0006892;post-Golgi vesicle-mediated transport;0.00362927852280434!GO:0003729;mRNA binding;0.00372003993824722!GO:0035258;steroid hormone receptor binding;0.00374719054758109!GO:0016860;intramolecular oxidoreductase activity;0.00374719054758109!GO:0009967;positive regulation of signal transduction;0.00375868950912996!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00376699305484875!GO:0048487;beta-tubulin binding;0.00379058588902853!GO:0031902;late endosome membrane;0.00383648175141567!GO:0006260;DNA replication;0.00395348913857185!GO:0008186;RNA-dependent ATPase activity;0.00403440572785585!GO:0000785;chromatin;0.00404410637346166!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00417282322493724!GO:0015399;primary active transmembrane transporter activity;0.00417282322493724!GO:0031543;peptidyl-proline dioxygenase activity;0.00421648668817882!GO:0030125;clathrin vesicle coat;0.00423240041344462!GO:0030665;clathrin coated vesicle membrane;0.00423240041344462!GO:0017166;vinculin binding;0.00445757806708371!GO:0030384;phosphoinositide metabolic process;0.00463960314527649!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00486274074119522!GO:0044427;chromosomal part;0.00493020061261145!GO:0005869;dynactin complex;0.00524455965684331!GO:0030127;COPII vesicle coat;0.00527182737259286!GO:0012507;ER to Golgi transport vesicle membrane;0.00527182737259286!GO:0007033;vacuole organization and biogenesis;0.00528633862188459!GO:0003899;DNA-directed RNA polymerase activity;0.00529104802310071!GO:0006414;translational elongation;0.00537523497690229!GO:0031072;heat shock protein binding;0.00537523497690229!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00541928743987963!GO:0046519;sphingoid metabolic process;0.00544732342589902!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00548045192543908!GO:0045047;protein targeting to ER;0.00548045192543908!GO:0051329;interphase of mitotic cell cycle;0.00554930588267151!GO:0009165;nucleotide biosynthetic process;0.00557867225875341!GO:0006672;ceramide metabolic process;0.00602501410322488!GO:0006497;protein amino acid lipidation;0.00614797445783741!GO:0016363;nuclear matrix;0.00632141863406972!GO:0065009;regulation of a molecular function;0.00691018539710097!GO:0007006;mitochondrial membrane organization and biogenesis;0.00701304747962756!GO:0007034;vacuolar transport;0.00708432951740254!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00710537265845763!GO:0019798;procollagen-proline dioxygenase activity;0.00724140759166185!GO:0006626;protein targeting to mitochondrion;0.00736455174667797!GO:0051325;interphase;0.00740970854654938!GO:0006740;NADPH regeneration;0.00744888524681644!GO:0006098;pentose-phosphate shunt;0.00744888524681644!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00798918577080148!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00798918577080148!GO:0022403;cell cycle phase;0.00798918577080148!GO:0030521;androgen receptor signaling pathway;0.00827732600469267!GO:0008139;nuclear localization sequence binding;0.00966451846571846!GO:0004004;ATP-dependent RNA helicase activity;0.00977945701219752!GO:0051168;nuclear export;0.00984879336669836!GO:0015992;proton transport;0.0099004380385358!GO:0008180;signalosome;0.0104427795173301!GO:0006818;hydrogen transport;0.0109403697641956!GO:0007030;Golgi organization and biogenesis;0.0111483167315347!GO:0046483;heterocycle metabolic process;0.0111483167315347!GO:0006595;polyamine metabolic process;0.0112783061216231!GO:0006897;endocytosis;0.0114564165654169!GO:0010324;membrane invagination;0.0114564165654169!GO:0003690;double-stranded DNA binding;0.0114564165654169!GO:0008312;7S RNA binding;0.0115506860327993!GO:0022406;membrane docking;0.011556562644835!GO:0048278;vesicle docking;0.011556562644835!GO:0006506;GPI anchor biosynthetic process;0.0117956252450741!GO:0042158;lipoprotein biosynthetic process;0.0117956252450741!GO:0008047;enzyme activator activity;0.0119968781565184!GO:0006007;glucose catabolic process;0.0121474923504962!GO:0000087;M phase of mitotic cell cycle;0.0124521315304917!GO:0051252;regulation of RNA metabolic process;0.0127345613611648!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0127598609138802!GO:0000339;RNA cap binding;0.0135036417880599!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0135036417880599!GO:0015002;heme-copper terminal oxidase activity;0.0135036417880599!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0135036417880599!GO:0004129;cytochrome-c oxidase activity;0.0135036417880599!GO:0006383;transcription from RNA polymerase III promoter;0.0136253059725313!GO:0065007;biological regulation;0.0137247817304903!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0139958560546166!GO:0006778;porphyrin metabolic process;0.0140801273166701!GO:0033013;tetrapyrrole metabolic process;0.0140801273166701!GO:0016272;prefoldin complex;0.0140822161730785!GO:0003746;translation elongation factor activity;0.0140911223094567!GO:0007067;mitosis;0.0141096142762383!GO:0006643;membrane lipid metabolic process;0.0141096142762383!GO:0005862;muscle thin filament tropomyosin;0.0143691374366829!GO:0031301;integral to organelle membrane;0.0143837603444105!GO:0040008;regulation of growth;0.014390934585524!GO:0051087;chaperone binding;0.0147920725168539!GO:0006505;GPI anchor metabolic process;0.0149582544492421!GO:0051101;regulation of DNA binding;0.0150694239040335!GO:0006904;vesicle docking during exocytosis;0.0152697996989699!GO:0043065;positive regulation of apoptosis;0.0153152285415638!GO:0051059;NF-kappaB binding;0.0153244999001988!GO:0022890;inorganic cation transmembrane transporter activity;0.015606125862158!GO:0043068;positive regulation of programmed cell death;0.0161102590026834!GO:0006334;nucleosome assembly;0.0162309421580516!GO:0045792;negative regulation of cell size;0.0162894499650928!GO:0005774;vacuolar membrane;0.0172303723379348!GO:0033673;negative regulation of kinase activity;0.0174183455238136!GO:0006469;negative regulation of protein kinase activity;0.0174183455238136!GO:0003711;transcription elongation regulator activity;0.0175029362786252!GO:0004674;protein serine/threonine kinase activity;0.0177624135818047!GO:0031529;ruffle organization and biogenesis;0.0181274087892353!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0184600311918937!GO:0030308;negative regulation of cell growth;0.0184600311918937!GO:0005684;U2-dependent spliceosome;0.0184628847757497!GO:0043022;ribosome binding;0.0185061585653502!GO:0050681;androgen receptor binding;0.0188112546624458!GO:0008234;cysteine-type peptidase activity;0.019434569111702!GO:0003756;protein disulfide isomerase activity;0.019434569111702!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.019434569111702!GO:0042168;heme metabolic process;0.0197400050240992!GO:0006950;response to stress;0.0197400050240992!GO:0031625;ubiquitin protein ligase binding;0.0200314968758239!GO:0030518;steroid hormone receptor signaling pathway;0.0200314968758239!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0201272298488478!GO:0043492;ATPase activity, coupled to movement of substances;0.0203857464320098!GO:0008632;apoptotic program;0.0205342441934426!GO:0043488;regulation of mRNA stability;0.0205695470230502!GO:0043487;regulation of RNA stability;0.0205695470230502!GO:0001516;prostaglandin biosynthetic process;0.0211531746262899!GO:0046457;prostanoid biosynthetic process;0.0211531746262899!GO:0000209;protein polyubiquitination;0.021158272855694!GO:0030032;lamellipodium biogenesis;0.0212018976801639!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0214003877959298!GO:0051348;negative regulation of transferase activity;0.0215781450244947!GO:0030145;manganese ion binding;0.0228438015799253!GO:0000059;protein import into nucleus, docking;0.0230650382991585!GO:0016125;sterol metabolic process;0.0233891158401615!GO:0006417;regulation of translation;0.0235672049744468!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0237415678673288!GO:0005832;chaperonin-containing T-complex;0.0240329732224958!GO:0016408;C-acyltransferase activity;0.0240961439392255!GO:0005975;carbohydrate metabolic process;0.0254506852337742!GO:0043433;negative regulation of transcription factor activity;0.0258746224173717!GO:0051287;NAD binding;0.0261281997288218!GO:0035035;histone acetyltransferase binding;0.0271003895191149!GO:0004287;prolyl oligopeptidase activity;0.0272558284472444!GO:0030041;actin filament polymerization;0.0277440286380317!GO:0031497;chromatin assembly;0.0286455571167736!GO:0006289;nucleotide-excision repair;0.0287253884986695!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0289249364210054!GO:0051128;regulation of cellular component organization and biogenesis;0.02902861776466!GO:0031124;mRNA 3'-end processing;0.02902861776466!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0306740638946705!GO:0007021;tubulin folding;0.0307648147505075!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0308977662247216!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0308977662247216!GO:0030880;RNA polymerase complex;0.0308977662247216!GO:0051272;positive regulation of cell motility;0.0309044093017661!GO:0040017;positive regulation of locomotion;0.0309044093017661!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0309044093017661!GO:0006769;nicotinamide metabolic process;0.0312200274846737!GO:0030100;regulation of endocytosis;0.0323368312332044!GO:0006458;'de novo' protein folding;0.0328960858343354!GO:0051084;'de novo' posttranslational protein folding;0.0328960858343354!GO:0007242;intracellular signaling cascade;0.0335354160089142!GO:0007041;lysosomal transport;0.0337631779248982!GO:0030833;regulation of actin filament polymerization;0.0345998813618153!GO:0004177;aminopeptidase activity;0.0346507596325274!GO:0045892;negative regulation of transcription, DNA-dependent;0.036024372520691!GO:0005637;nuclear inner membrane;0.036024372520691!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0361820699756961!GO:0006739;NADP metabolic process;0.036570584637364!GO:0046822;regulation of nucleocytoplasmic transport;0.0367169595216878!GO:0006352;transcription initiation;0.0368416396636401!GO:0051270;regulation of cell motility;0.0372562372239423!GO:0007265;Ras protein signal transduction;0.0373115048982826!GO:0033559;unsaturated fatty acid metabolic process;0.0375862461180321!GO:0006636;unsaturated fatty acid biosynthetic process;0.0375862461180321!GO:0006354;RNA elongation;0.0377304882081297!GO:0008154;actin polymerization and/or depolymerization;0.0379783402143139!GO:0032507;maintenance of cellular protein localization;0.0388182480178381!GO:0044437;vacuolar part;0.0401672135037416!GO:0006118;electron transport;0.0419913957711451!GO:0008484;sulfuric ester hydrolase activity;0.0420819384987138!GO:0031371;ubiquitin conjugating enzyme complex;0.0424443293985965!GO:0006402;mRNA catabolic process;0.0429118842092949!GO:0030031;cell projection biogenesis;0.0429118842092949!GO:0050811;GABA receptor binding;0.043137393343266!GO:0051098;regulation of binding;0.0437604011302482!GO:0003923;GPI-anchor transamidase activity;0.0439463098482588!GO:0016255;attachment of GPI anchor to protein;0.0439463098482588!GO:0042765;GPI-anchor transamidase complex;0.0439463098482588!GO:0008147;structural constituent of bone;0.0442656956917042!GO:0050178;phenylpyruvate tautomerase activity;0.0442883197114246!GO:0005801;cis-Golgi network;0.0444918433919405!GO:0005874;microtubule;0.0447025114125898!GO:0051235;maintenance of localization;0.0447025114125898!GO:0006644;phospholipid metabolic process;0.0447260236772531!GO:0005784;translocon complex;0.0447691854325077!GO:0006378;mRNA polyadenylation;0.0450423217411649!GO:0050662;coenzyme binding;0.0451996775132788!GO:0015923;mannosidase activity;0.0456669607422183!GO:0006779;porphyrin biosynthetic process;0.0459582102803764!GO:0033014;tetrapyrrole biosynthetic process;0.0459582102803764!GO:0051540;metal cluster binding;0.0476773320424398!GO:0051536;iron-sulfur cluster binding;0.0476773320424398!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0476773320424398!GO:0030911;TPR domain binding;0.0478977360932513!GO:0005765;lysosomal membrane;0.0480653295986436!GO:0022408;negative regulation of cell-cell adhesion;0.0481619591169623!GO:0008022;protein C-terminus binding;0.0485108428262385!GO:0051539;4 iron, 4 sulfur cluster binding;0.0485108428262385!GO:0031970;organelle envelope lumen;0.0487247655325497!GO:0048144;fibroblast proliferation;0.0488500993251526!GO:0048145;regulation of fibroblast proliferation;0.0488500993251526!GO:0005583;fibrillar collagen;0.0497149361257654!GO:0043407;negative regulation of MAP kinase activity;0.0497149361257654!GO:0006066;alcohol metabolic process;0.0498926257245608 | |||
|sample_id=11762 | |sample_id=11762 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=ovary | |sample_tissue=ovary | ||
|top_motifs=TAL1_TCF{3,4,12}:1.87361359991;HSF1,2:1.79600822895;HOX{A5,B5}:1.7862154745;GLI1..3:1.76558519414;GZF1:1.64673745846;NKX3-1:1.60383645957;HMGA1,2:1.54000105137;HIF1A:1.30933597337;NR6A1:1.23892799555;ESR1:1.23715053635;SMAD1..7,9:1.16858227478;ZIC1..3:1.13181973822;TEF:1.10184817833;GCM1,2:1.08049959722;ZNF238:1.07409800999;XBP1:1.06482449881;EVI1:1.04711708468;SRF:1.01560798921;TEAD1:0.984736590505;ATF6:0.983735351394;RXRA_VDR{dimer}:0.982530160643;ZNF423:0.943882230693;MYBL2:0.833987673951;UFEwm:0.828942117219;AIRE:0.822457103406;PAX4:0.795384539171;XCPE1{core}:0.78123410908;MAFB:0.780811360887;MAZ:0.780704851629;EN1,2:0.767389306852;IKZF1:0.754872259013;PAX5:0.754069055576;ONECUT1,2:0.753608988945;EBF1:0.745854287615;NKX3-2:0.738723469913;NFATC1..3:0.735930939721;NR3C1:0.724104624403;TFCP2:0.716764050535;RFX1:0.704990748938;RXR{A,B,G}:0.683707374751;NFE2L2:0.678578295686;GTF2I:0.675529656356;ZNF148:0.654307261139;DBP:0.653974602733;ZNF384:0.645900941603;PRDM1:0.64320553957;TLX1..3_NFIC{dimer}:0.599254193854;FOXM1:0.592996268092;GTF2A1,2:0.584563591546;TBP:0.583590733281;NKX2-1,4:0.53824054591;ZBTB6:0.52253378054;HMX1:0.517953139981;NFIX:0.517167557771;MZF1:0.50867618898;HOX{A4,D4}:0.507522093455;PAX6:0.506014267826;TP53:0.496868682962;ALX4:0.466794716447;BACH2:0.446163878189;SP1:0.432851628011;PAX1,9:0.428220838874;HLF:0.426833814893;FOS_FOS{B,L1}_JUN{B,D}:0.426264270148;NFE2L1:0.370721337675;TBX4,5:0.340641197761;STAT2,4,6:0.323463074287;LHX3,4:0.31725072662;PATZ1:0.309340779579;ZBTB16:0.307520160878;PPARG:0.298191002312;ALX1:0.295407518901;TLX2:0.285867061798;MTE{core}:0.284086976786;EP300:0.281631889435;TFAP2B:0.234271425829;GATA4:0.234197169991;NR1H4:0.228757269146;KLF4:0.228721177418;CRX:0.227323597459;TFAP4:0.226457190324;NFE2:0.22500703029;NANOG{mouse}:0.21601374047;ARID5B:0.209755193838;PBX1:0.200470774771;POU6F1:0.185160807788;PAX2:0.182109764994;HES1:0.179482035849;ATF2:0.178653713867;NFIL3:0.171605454102;RREB1:0.153706052607;NFKB1_REL_RELA:0.143894639452;EGR1..3:0.134646150567;SOX17:0.126356070586;HBP1_HMGB_SSRP1_UBTF:0.11456517203;FOX{I1,J2}:0.0977705504758;FOSL2:0.0924515558384;HNF1A:0.0920279516369;RUNX1..3:0.0798909160434;JUN:0.0760287430456;PAX8:0.0759353256836;CDX1,2,4:0.0622939245404;HIC1:0.0527114940913;ADNP_IRX_SIX_ZHX:0.0444334997628;SPZ1:0.0214955335615;PAX3,7:0.00257930691559;REST:0.00221700768693;AR:0.0014222826909;TOPORS:-0.0121816757369;GFI1B:-0.0130253340659;AHR_ARNT_ARNT2:-0.0178270039517;SREBF1,2:-0.0289555157864;NHLH1,2:-0.0535207540735;FOXP3:-0.0730375725975;bHLH_family:-0.0893443448047;CDC5L:-0.0923157210833;IRF7:-0.0985079020335;ELK1,4_GABP{A,B1}:-0.102759607277;IRF1,2:-0.109505229978;STAT5{A,B}:-0.124650390254;HAND1,2:-0.127879568867;STAT1,3:-0.128693161566;MEF2{A,B,C,D}:-0.129234945458;TFAP2{A,C}:-0.153767727024;CREB1:-0.153912610476;GATA6:-0.168828627079;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.173326807474;FOX{D1,D2}:-0.195944106247;LEF1_TCF7_TCF7L1,2:-0.206525963942;SOX2:-0.229608538201;NKX2-3_NKX2-5:-0.23119663055;POU5F1:-0.233335350082;HOXA9_MEIS1:-0.275151362581;CEBPA,B_DDIT3:-0.277058578782;MYFfamily:-0.282097450766;ZFP161:-0.300285603762;POU3F1..4:-0.321909069667;LMO2:-0.321971662029;MTF1:-0.331647171311;HNF4A_NR2F1,2:-0.340229655958;RFX2..5_RFXANK_RFXAP:-0.376395879788;NKX6-1,2:-0.387886417583;ESRRA:-0.393355358975;ATF5_CREB3:-0.40139649974;NRF1:-0.406185483885;FOXA2:-0.411241500452;MED-1{core}:-0.41499711731;DMAP1_NCOR{1,2}_SMARC:-0.415551035774;FOXL1:-0.423703302085;SNAI1..3:-0.434597667821;ZNF143:-0.43533341172;ETS1,2:-0.444440566562;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.485704598824;NANOG:-0.501557126628;TGIF1:-0.51368321513;POU2F1..3:-0.52921139317;SPI1:-0.538791879908;POU1F1:-0.554066058716;ELF1,2,4:-0.560995284386;FOXP1:-0.562169914801;FOXD3:-0.576691363451;SOX5:-0.603875761611;FOXQ1:-0.604698402185;ZEB1:-0.605948806281;RBPJ:-0.631813430434;FOXO1,3,4:-0.656198450252;MYOD1:-0.659087755608;ATF4:-0.660086409524;PRRX1,2:-0.667506435648;NKX2-2,8:-0.680507880534;NR5A1,2:-0.68733187043;FOXN1:-0.708063299593;E2F1..5:-0.711303316675;YY1:-0.72760481009;SPIB:-0.737520663563;IKZF2:-0.747381391267;MYB:-0.757862441225;GFI1:-0.801795268205;RORA:-0.814335328293;FOX{F1,F2,J1}:-0.826769491073;TFDP1:-0.860154664913;NFY{A,B,C}:-0.887445973516;BPTF:-0.92144964124;OCT4_SOX2{dimer}:-0.935642334216;CUX2:-0.981050018383;VSX1,2:-1.02885121659;SOX{8,9,10}:-1.09714254267;T:-1.19458675834;BREu{core}:-1.21231500928;PDX1:-1.32873893517;HOX{A6,A7,B6,B7}:-1.34599925113;PITX1..3:-1.57958536787 | |top_motifs=TAL1_TCF{3,4,12}:1.87361359991;HSF1,2:1.79600822895;HOX{A5,B5}:1.7862154745;GLI1..3:1.76558519414;GZF1:1.64673745846;NKX3-1:1.60383645957;HMGA1,2:1.54000105137;HIF1A:1.30933597337;NR6A1:1.23892799555;ESR1:1.23715053635;SMAD1..7,9:1.16858227478;ZIC1..3:1.13181973822;TEF:1.10184817833;GCM1,2:1.08049959722;ZNF238:1.07409800999;XBP1:1.06482449881;EVI1:1.04711708468;SRF:1.01560798921;TEAD1:0.984736590505;ATF6:0.983735351394;RXRA_VDR{dimer}:0.982530160643;ZNF423:0.943882230693;MYBL2:0.833987673951;UFEwm:0.828942117219;AIRE:0.822457103406;PAX4:0.795384539171;XCPE1{core}:0.78123410908;MAFB:0.780811360887;MAZ:0.780704851629;EN1,2:0.767389306852;IKZF1:0.754872259013;PAX5:0.754069055576;ONECUT1,2:0.753608988945;EBF1:0.745854287615;NKX3-2:0.738723469913;NFATC1..3:0.735930939721;NR3C1:0.724104624403;TFCP2:0.716764050535;RFX1:0.704990748938;RXR{A,B,G}:0.683707374751;NFE2L2:0.678578295686;GTF2I:0.675529656356;ZNF148:0.654307261139;DBP:0.653974602733;ZNF384:0.645900941603;PRDM1:0.64320553957;TLX1..3_NFIC{dimer}:0.599254193854;FOXM1:0.592996268092;GTF2A1,2:0.584563591546;TBP:0.583590733281;NKX2-1,4:0.53824054591;ZBTB6:0.52253378054;HMX1:0.517953139981;NFIX:0.517167557771;MZF1:0.50867618898;HOX{A4,D4}:0.507522093455;PAX6:0.506014267826;TP53:0.496868682962;ALX4:0.466794716447;BACH2:0.446163878189;SP1:0.432851628011;PAX1,9:0.428220838874;HLF:0.426833814893;FOS_FOS{B,L1}_JUN{B,D}:0.426264270148;NFE2L1:0.370721337675;TBX4,5:0.340641197761;STAT2,4,6:0.323463074287;LHX3,4:0.31725072662;PATZ1:0.309340779579;ZBTB16:0.307520160878;PPARG:0.298191002312;ALX1:0.295407518901;TLX2:0.285867061798;MTE{core}:0.284086976786;EP300:0.281631889435;TFAP2B:0.234271425829;GATA4:0.234197169991;NR1H4:0.228757269146;KLF4:0.228721177418;CRX:0.227323597459;TFAP4:0.226457190324;NFE2:0.22500703029;NANOG{mouse}:0.21601374047;ARID5B:0.209755193838;PBX1:0.200470774771;POU6F1:0.185160807788;PAX2:0.182109764994;HES1:0.179482035849;ATF2:0.178653713867;NFIL3:0.171605454102;RREB1:0.153706052607;NFKB1_REL_RELA:0.143894639452;EGR1..3:0.134646150567;SOX17:0.126356070586;HBP1_HMGB_SSRP1_UBTF:0.11456517203;FOX{I1,J2}:0.0977705504758;FOSL2:0.0924515558384;HNF1A:0.0920279516369;RUNX1..3:0.0798909160434;JUN:0.0760287430456;PAX8:0.0759353256836;CDX1,2,4:0.0622939245404;HIC1:0.0527114940913;ADNP_IRX_SIX_ZHX:0.0444334997628;SPZ1:0.0214955335615;PAX3,7:0.00257930691559;REST:0.00221700768693;AR:0.0014222826909;TOPORS:-0.0121816757369;GFI1B:-0.0130253340659;AHR_ARNT_ARNT2:-0.0178270039517;SREBF1,2:-0.0289555157864;NHLH1,2:-0.0535207540735;FOXP3:-0.0730375725975;bHLH_family:-0.0893443448047;CDC5L:-0.0923157210833;IRF7:-0.0985079020335;ELK1,4_GABP{A,B1}:-0.102759607277;IRF1,2:-0.109505229978;STAT5{A,B}:-0.124650390254;HAND1,2:-0.127879568867;STAT1,3:-0.128693161566;MEF2{A,B,C,D}:-0.129234945458;TFAP2{A,C}:-0.153767727024;CREB1:-0.153912610476;GATA6:-0.168828627079;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.173326807474;FOX{D1,D2}:-0.195944106247;LEF1_TCF7_TCF7L1,2:-0.206525963942;SOX2:-0.229608538201;NKX2-3_NKX2-5:-0.23119663055;POU5F1:-0.233335350082;HOXA9_MEIS1:-0.275151362581;CEBPA,B_DDIT3:-0.277058578782;MYFfamily:-0.282097450766;ZFP161:-0.300285603762;POU3F1..4:-0.321909069667;LMO2:-0.321971662029;MTF1:-0.331647171311;HNF4A_NR2F1,2:-0.340229655958;RFX2..5_RFXANK_RFXAP:-0.376395879788;NKX6-1,2:-0.387886417583;ESRRA:-0.393355358975;ATF5_CREB3:-0.40139649974;NRF1:-0.406185483885;FOXA2:-0.411241500452;MED-1{core}:-0.41499711731;DMAP1_NCOR{1,2}_SMARC:-0.415551035774;FOXL1:-0.423703302085;SNAI1..3:-0.434597667821;ZNF143:-0.43533341172;ETS1,2:-0.444440566562;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.485704598824;NANOG:-0.501557126628;TGIF1:-0.51368321513;POU2F1..3:-0.52921139317;SPI1:-0.538791879908;POU1F1:-0.554066058716;ELF1,2,4:-0.560995284386;FOXP1:-0.562169914801;FOXD3:-0.576691363451;SOX5:-0.603875761611;FOXQ1:-0.604698402185;ZEB1:-0.605948806281;RBPJ:-0.631813430434;FOXO1,3,4:-0.656198450252;MYOD1:-0.659087755608;ATF4:-0.660086409524;PRRX1,2:-0.667506435648;NKX2-2,8:-0.680507880534;NR5A1,2:-0.68733187043;FOXN1:-0.708063299593;E2F1..5:-0.711303316675;YY1:-0.72760481009;SPIB:-0.737520663563;IKZF2:-0.747381391267;MYB:-0.757862441225;GFI1:-0.801795268205;RORA:-0.814335328293;FOX{F1,F2,J1}:-0.826769491073;TFDP1:-0.860154664913;NFY{A,B,C}:-0.887445973516;BPTF:-0.92144964124;OCT4_SOX2{dimer}:-0.935642334216;CUX2:-0.981050018383;VSX1,2:-1.02885121659;SOX{8,9,10}:-1.09714254267;T:-1.19458675834;BREu{core}:-1.21231500928;PDX1:-1.32873893517;HOX{A6,A7,B6,B7}:-1.34599925113;PITX1..3:-1.57958536787 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11762-123H7;search_select_hide=table117:FF:11762-123H7 | |||
}} | }} | ||
Latest revision as of 18:18, 4 June 2020
| Name: | mesenchymal precursor cell - ovarian cancer metastasis, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12378 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
|
| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12378
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12378
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.929 |
| 10 | 10 | 0.442 |
| 100 | 100 | 0.922 |
| 101 | 101 | 0.958 |
| 102 | 102 | 0.167 |
| 103 | 103 | 0.275 |
| 104 | 104 | 0.943 |
| 105 | 105 | 0.664 |
| 106 | 106 | 0.13 |
| 107 | 107 | 0.0756 |
| 108 | 108 | 0.588 |
| 109 | 109 | 0.777 |
| 11 | 11 | 0.613 |
| 110 | 110 | 0.127 |
| 111 | 111 | 0.0262 |
| 112 | 112 | 0.828 |
| 113 | 113 | 0.0212 |
| 114 | 114 | 0.735 |
| 115 | 115 | 0.0846 |
| 116 | 116 | 0.34 |
| 117 | 117 | 0.867 |
| 118 | 118 | 0.264 |
| 119 | 119 | 0.995 |
| 12 | 12 | 0.543 |
| 120 | 120 | 0.531 |
| 121 | 121 | 0.867 |
| 122 | 122 | 0.289 |
| 123 | 123 | 1.12643e-4 |
| 124 | 124 | 0.173 |
| 125 | 125 | 0.301 |
| 126 | 126 | 0.868 |
| 127 | 127 | 0.746 |
| 128 | 128 | 0.0506 |
| 129 | 129 | 0.534 |
| 13 | 13 | 0.569 |
| 130 | 130 | 0.829 |
| 131 | 131 | 0.0517 |
| 132 | 132 | 0.446 |
| 133 | 133 | 0.309 |
| 134 | 134 | 0.971 |
| 135 | 135 | 0.505 |
| 136 | 136 | 0.923 |
| 137 | 137 | 0.612 |
| 138 | 138 | 0.951 |
| 139 | 139 | 0.186 |
| 14 | 14 | 0.264 |
| 140 | 140 | 0.21 |
| 141 | 141 | 0.402 |
| 142 | 142 | 0.317 |
| 143 | 143 | 0.585 |
| 144 | 144 | 0.271 |
| 145 | 145 | 0.951 |
| 146 | 146 | 0.814 |
| 147 | 147 | 0.0827 |
| 148 | 148 | 0.257 |
| 149 | 149 | 0.0459 |
| 15 | 15 | 0.685 |
| 150 | 150 | 0.189 |
| 151 | 151 | 0.839 |
| 152 | 152 | 0.0529 |
| 153 | 153 | 0.703 |
| 154 | 154 | 0.934 |
| 155 | 155 | 0.134 |
| 156 | 156 | 0.611 |
| 157 | 157 | 0.657 |
| 158 | 158 | 0.0176 |
| 159 | 159 | 0.317 |
| 16 | 16 | 0.0203 |
| 160 | 160 | 0.836 |
| 161 | 161 | 0.792 |
| 162 | 162 | 0.423 |
| 163 | 163 | 0.02 |
| 164 | 164 | 0.0261 |
| 165 | 165 | 0.689 |
| 166 | 166 | 0.162 |
| 167 | 167 | 0.161 |
| 168 | 168 | 0.684 |
| 169 | 169 | 0.0718 |
| 17 | 17 | 0.537 |
| 18 | 18 | 0.454 |
| 19 | 19 | 0.312 |
| 2 | 2 | 0.152 |
| 20 | 20 | 0.47 |
| 21 | 21 | 0.974 |
| 22 | 22 | 0.2 |
| 23 | 23 | 0.0113 |
| 24 | 24 | 0.869 |
| 25 | 25 | 0.0462 |
| 26 | 26 | 0.492 |
| 27 | 27 | 0.806 |
| 28 | 28 | 0.758 |
| 29 | 29 | 0.208 |
| 3 | 3 | 0.462 |
| 30 | 30 | 0.286 |
| 31 | 31 | 0.568 |
| 32 | 32 | 9.42625e-16 |
| 33 | 33 | 0.692 |
| 34 | 34 | 0.305 |
| 35 | 35 | 0.643 |
| 36 | 36 | 0.0944 |
| 37 | 37 | 0.191 |
| 38 | 38 | 0.454 |
| 39 | 39 | 0.329 |
| 4 | 4 | 0.549 |
| 40 | 40 | 0.963 |
| 41 | 41 | 0.4 |
| 42 | 42 | 0.354 |
| 43 | 43 | 0.325 |
| 44 | 44 | 0.436 |
| 45 | 45 | 0.426 |
| 46 | 46 | 0.721 |
| 47 | 47 | 0.553 |
| 48 | 48 | 0.97 |
| 49 | 49 | 0.474 |
| 5 | 5 | 0.956 |
| 50 | 50 | 0.789 |
| 51 | 51 | 0.523 |
| 52 | 52 | 0.353 |
| 53 | 53 | 0.053 |
| 54 | 54 | 0.491 |
| 55 | 55 | 0.521 |
| 56 | 56 | 0.702 |
| 57 | 57 | 0.863 |
| 58 | 58 | 0.283 |
| 59 | 59 | 0.164 |
| 6 | 6 | 0.647 |
| 60 | 60 | 0.522 |
| 61 | 61 | 0.623 |
| 62 | 62 | 0.766 |
| 63 | 63 | 0.579 |
| 64 | 64 | 0.996 |
| 65 | 65 | 0.452 |
| 66 | 66 | 0.322 |
| 67 | 67 | 0.874 |
| 68 | 68 | 0.842 |
| 69 | 69 | 0.645 |
| 7 | 7 | 0.294 |
| 70 | 70 | 0.331 |
| 71 | 71 | 0.515 |
| 72 | 72 | 0.917 |
| 73 | 73 | 0.146 |
| 74 | 74 | 0.00927 |
| 75 | 75 | 0.637 |
| 76 | 76 | 0.575 |
| 77 | 77 | 0.00915 |
| 78 | 78 | 0.683 |
| 79 | 79 | 0.00352 |
| 8 | 8 | 0.313 |
| 80 | 80 | 0.443 |
| 81 | 81 | 0.713 |
| 82 | 82 | 0.421 |
| 83 | 83 | 0.565 |
| 84 | 84 | 0.654 |
| 85 | 85 | 0.0325 |
| 86 | 86 | 0.949 |
| 87 | 87 | 0.274 |
| 88 | 88 | 0.635 |
| 89 | 89 | 0.152 |
| 9 | 9 | 0.341 |
| 90 | 90 | 0.244 |
| 91 | 91 | 0.882 |
| 92 | 92 | 0.0401 |
| 93 | 93 | 0.971 |
| 94 | 94 | 0.929 |
| 95 | 95 | 0.91 |
| 96 | 96 | 0.916 |
| 97 | 97 | 0.105 |
| 98 | 98 | 0.0113 |
| 99 | 99 | 0.0659 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12378
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000274 human mesenchymal precursor cell- ovarian cancer-metastasis sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)
UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000274 (human mesenchymal precursor cell- ovarian cancer-metastasis sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
