FF:11772-123I8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005311 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008574;DRR009446;DRZ000871;DRZ002256;DRZ012221;DRZ013606 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001044,UBERON:0000033,UBERON:0001007,UBERON:0004121,UBERON:0004119,UBERON:0011216,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000161,UBERON:0001444,UBERON:0002553,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003293,UBERON:0003294,UBERON:0002365,UBERON:0000464,UBERON:0002530,UBERON:0010047,UBERON:0003408,UBERON:0010317,UBERON:0001555,UBERON:0001004,UBERON:0000153,UBERON:0007811,UBERON:0000165,UBERON:0001041,UBERON:0000166,UBERON:0000167,UBERON:0002330 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000151,CL:0000066,CL:0002371,CL:0000150,CL:0000154,CL:0000255,CL:0000622,CL:0002076,CL:0002251,CL:0002623 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000278 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/salivary%2520acinar%2520cells%252c%2520donor2.CNhs12811.11772-123I8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/salivary%2520acinar%2520cells%252c%2520donor2.CNhs12811.11772-123I8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/salivary%2520acinar%2520cells%252c%2520donor2.CNhs12811.11772-123I8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/salivary%2520acinar%2520cells%252c%2520donor2.CNhs12811.11772-123I8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/salivary%2520acinar%2520cells%252c%2520donor2.CNhs12811.11772-123I8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11772-123I8 | |id=FF:11772-123I8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000278 | ||
|is_obsolete= | |||
|library_id=CNhs12811 | |||
|library_id_phase_based=2:CNhs12811 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11772 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11772 | |||
|name=salivary acinar cells, donor2 | |name=salivary acinar cells, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12811,LSID972,release012,COMPLETED | |profile_hcage=CNhs12811,LSID972,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=64.44 | |rna_weight_ug=64.44 | ||
|sample_age=49 | |sample_age=49 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.54715479505758e-249!GO:0043226;organelle;2.98184706299216e-198!GO:0043229;intracellular organelle;1.08932221841738e-197!GO:0043231;intracellular membrane-bound organelle;9.48837395904905e-186!GO:0043227;membrane-bound organelle;1.70824611577453e-185!GO:0005737;cytoplasm;2.59623423134312e-179!GO:0044422;organelle part;5.95848206240425e-127!GO:0044446;intracellular organelle part;1.19009864409363e-125!GO:0044444;cytoplasmic part;3.09633132377172e-115!GO:0044237;cellular metabolic process;6.13063961322374e-90!GO:0044238;primary metabolic process;9.00929255573138e-90!GO:0032991;macromolecular complex;4.09045464978745e-85!GO:0043170;macromolecule metabolic process;6.40861009371237e-83!GO:0005634;nucleus;5.07560603917788e-79!GO:0005515;protein binding;6.76090693923579e-78!GO:0030529;ribonucleoprotein complex;2.44484884909793e-77!GO:0043233;organelle lumen;1.97180006193422e-70!GO:0031974;membrane-enclosed lumen;1.97180006193422e-70!GO:0044428;nuclear part;6.39876994045064e-67!GO:0003723;RNA binding;6.42095784772708e-62!GO:0005739;mitochondrion;9.52713686471747e-62!GO:0043283;biopolymer metabolic process;1.11822395521691e-51!GO:0010467;gene expression;1.93477684612626e-48!GO:0016043;cellular component organization and biogenesis;9.60843258469391e-47!GO:0019538;protein metabolic process;3.71592211223834e-46!GO:0006396;RNA processing;8.52830155640234e-46!GO:0031090;organelle membrane;1.99638965097496e-45!GO:0005840;ribosome;5.91604088129097e-45!GO:0031981;nuclear lumen;2.40317818013007e-44!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.64653992292503e-43!GO:0006412;translation;5.86649294296758e-43!GO:0033036;macromolecule localization;1.82314467828766e-42!GO:0015031;protein transport;2.75499687865881e-42!GO:0044429;mitochondrial part;9.22084430782959e-42!GO:0043234;protein complex;2.56561993621099e-41!GO:0044260;cellular macromolecule metabolic process;2.08122532790212e-40!GO:0044267;cellular protein metabolic process;3.18144773838738e-40!GO:0003735;structural constituent of ribosome;2.8625000248015e-39!GO:0008104;protein localization;3.35791064415485e-39!GO:0045184;establishment of protein localization;4.03644965385751e-39!GO:0016071;mRNA metabolic process;1.79177081639783e-37!GO:0005829;cytosol;1.50001908818175e-36!GO:0031967;organelle envelope;2.87249273572002e-35!GO:0031975;envelope;5.08721580627746e-35!GO:0008380;RNA splicing;9.73059611746369e-35!GO:0046907;intracellular transport;1.04603832479219e-34!GO:0009058;biosynthetic process;1.09571333184643e-34!GO:0033279;ribosomal subunit;1.34879433888892e-34!GO:0043228;non-membrane-bound organelle;3.19069923739042e-33!GO:0043232;intracellular non-membrane-bound organelle;3.19069923739042e-33!GO:0044249;cellular biosynthetic process;8.07383569059866e-33!GO:0065003;macromolecular complex assembly;1.07036191616022e-32!GO:0009059;macromolecule biosynthetic process;6.44238724280126e-32!GO:0006397;mRNA processing;1.17218913432046e-31!GO:0006886;intracellular protein transport;1.93766981586374e-30!GO:0022607;cellular component assembly;1.7037622427702e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.64481017905507e-27!GO:0005654;nucleoplasm;2.03409696819425e-27!GO:0003676;nucleic acid binding;7.75002388915412e-27!GO:0006996;organelle organization and biogenesis;1.00892491009775e-26!GO:0005740;mitochondrial envelope;1.42081330491216e-26!GO:0016070;RNA metabolic process;1.28434138794933e-25!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.64233032184359e-25!GO:0031966;mitochondrial membrane;2.74081608524069e-25!GO:0019866;organelle inner membrane;8.20049348529265e-25!GO:0005681;spliceosome;1.77420358776006e-24!GO:0005743;mitochondrial inner membrane;2.01000027866126e-23!GO:0044451;nucleoplasm part;3.56818426109597e-23!GO:0006259;DNA metabolic process;5.49058114586929e-23!GO:0051641;cellular localization;1.46049229336498e-21!GO:0051649;establishment of cellular localization;1.74362281626417e-21!GO:0044445;cytosolic part;2.18166812677684e-21!GO:0006119;oxidative phosphorylation;9.23546474158607e-21!GO:0044455;mitochondrial membrane part;2.77927564984041e-19!GO:0008134;transcription factor binding;4.51868294551776e-19!GO:0000166;nucleotide binding;5.03697675771952e-19!GO:0031980;mitochondrial lumen;5.91402274068646e-19!GO:0005759;mitochondrial matrix;5.91402274068646e-19!GO:0005730;nucleolus;1.34983193666581e-18!GO:0015934;large ribosomal subunit;1.76089932683786e-18!GO:0048770;pigment granule;2.18939300320508e-18!GO:0042470;melanosome;2.18939300320508e-18!GO:0012505;endomembrane system;1.69858191486622e-17!GO:0015935;small ribosomal subunit;4.7533871212227e-17!GO:0006457;protein folding;7.18343221730214e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.51501462132059e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;9.70167516154266e-17!GO:0016462;pyrophosphatase activity;1.0507670281319e-16!GO:0006512;ubiquitin cycle;1.21947146605962e-16!GO:0006605;protein targeting;2.61091478081675e-16!GO:0022618;protein-RNA complex assembly;2.7359008803975e-16!GO:0016874;ligase activity;3.70301797564431e-16!GO:0017111;nucleoside-triphosphatase activity;1.0438778827542e-15!GO:0005746;mitochondrial respiratory chain;1.53767788651494e-15!GO:0005783;endoplasmic reticulum;3.5714089813751e-15!GO:0006974;response to DNA damage stimulus;5.78643351783645e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.79136001535871e-15!GO:0008135;translation factor activity, nucleic acid binding;1.12586030667948e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.17095242664954e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.67773077188965e-14!GO:0044265;cellular macromolecule catabolic process;2.10065028324819e-14!GO:0043285;biopolymer catabolic process;2.10065028324819e-14!GO:0019941;modification-dependent protein catabolic process;2.3219258069283e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.3219258069283e-14!GO:0044257;cellular protein catabolic process;2.81216702414005e-14!GO:0007049;cell cycle;2.86730903659973e-14!GO:0048193;Golgi vesicle transport;3.3574805236828e-14!GO:0043412;biopolymer modification;4.74072729293914e-14!GO:0051186;cofactor metabolic process;7.01647914370975e-14!GO:0050136;NADH dehydrogenase (quinone) activity;7.29080410615808e-14!GO:0003954;NADH dehydrogenase activity;7.29080410615808e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.29080410615808e-14!GO:0005794;Golgi apparatus;8.77139033123578e-14!GO:0044432;endoplasmic reticulum part;1.00573752450768e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.89207858775365e-13!GO:0016604;nuclear body;3.68882828552543e-13!GO:0005761;mitochondrial ribosome;6.58092471643965e-13!GO:0000313;organellar ribosome;6.58092471643965e-13!GO:0050794;regulation of cellular process;6.68846239118083e-13!GO:0012501;programmed cell death;6.79969550851372e-13!GO:0000502;proteasome complex (sensu Eukaryota);8.1167364733644e-13!GO:0017076;purine nucleotide binding;8.87985446930918e-13!GO:0006915;apoptosis;1.06563898404462e-12!GO:0006366;transcription from RNA polymerase II promoter;1.23761958387987e-12!GO:0032553;ribonucleotide binding;1.59089193617407e-12!GO:0032555;purine ribonucleotide binding;1.59089193617407e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.59207593717181e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.75353894129693e-12!GO:0006464;protein modification process;1.78960609082138e-12!GO:0030163;protein catabolic process;1.81840227436727e-12!GO:0009057;macromolecule catabolic process;2.48152064956878e-12!GO:0006461;protein complex assembly;3.07849064726267e-12!GO:0042254;ribosome biogenesis and assembly;3.78089982415663e-12!GO:0006732;coenzyme metabolic process;4.59155717535652e-12!GO:0042775;organelle ATP synthesis coupled electron transport;5.18953123046865e-12!GO:0042773;ATP synthesis coupled electron transport;5.18953123046865e-12!GO:0051082;unfolded protein binding;6.31674439634481e-12!GO:0030964;NADH dehydrogenase complex (quinone);7.25851335852658e-12!GO:0045271;respiratory chain complex I;7.25851335852658e-12!GO:0005747;mitochondrial respiratory chain complex I;7.25851335852658e-12!GO:0003712;transcription cofactor activity;8.06622783105153e-12!GO:0006913;nucleocytoplasmic transport;8.72098446401761e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;8.83089685616436e-12!GO:0000375;RNA splicing, via transesterification reactions;8.83089685616436e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.83089685616436e-12!GO:0044248;cellular catabolic process;1.08037749406959e-11!GO:0043687;post-translational protein modification;1.36698939580853e-11!GO:0008219;cell death;1.50571673993621e-11!GO:0016265;death;1.50571673993621e-11!GO:0006281;DNA repair;1.54905553088553e-11!GO:0048523;negative regulation of cellular process;1.7641129844593e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.92556166813842e-11!GO:0051169;nuclear transport;1.96681249815124e-11!GO:0003743;translation initiation factor activity;2.26334501393669e-11!GO:0016192;vesicle-mediated transport;2.40038223972533e-11!GO:0016607;nuclear speck;2.50326205484924e-11!GO:0017038;protein import;4.04126733404372e-11!GO:0008565;protein transporter activity;7.55133635366432e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.59878320497149e-10!GO:0005789;endoplasmic reticulum membrane;1.71064051653438e-10!GO:0009719;response to endogenous stimulus;2.90679127436322e-10!GO:0006446;regulation of translational initiation;3.63968447812867e-10!GO:0005524;ATP binding;4.94286010147429e-10!GO:0048519;negative regulation of biological process;5.67741396413245e-10!GO:0030554;adenyl nucleotide binding;7.97011471281719e-10!GO:0008639;small protein conjugating enzyme activity;8.57325012005075e-10!GO:0051726;regulation of cell cycle;8.59553724054232e-10!GO:0006413;translational initiation;8.78266310427721e-10!GO:0000074;regulation of progression through cell cycle;1.01537231941891e-09!GO:0032559;adenyl ribonucleotide binding;1.10978646667531e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.1518959599991e-09!GO:0031965;nuclear membrane;1.31351971639958e-09!GO:0004842;ubiquitin-protein ligase activity;1.71635928743769e-09!GO:0022402;cell cycle process;1.71635928743769e-09!GO:0005793;ER-Golgi intermediate compartment;1.77976518656338e-09!GO:0005635;nuclear envelope;2.26544283554358e-09!GO:0009055;electron carrier activity;3.10784376013116e-09!GO:0005768;endosome;3.79311604543403e-09!GO:0006323;DNA packaging;3.89680398607228e-09!GO:0006399;tRNA metabolic process;5.500871774732e-09!GO:0050789;regulation of biological process;5.54590113259889e-09!GO:0051276;chromosome organization and biogenesis;6.06978813590159e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.38392385430787e-09!GO:0009259;ribonucleotide metabolic process;7.57020040610192e-09!GO:0019787;small conjugating protein ligase activity;9.18753833806104e-09!GO:0006163;purine nucleotide metabolic process;9.46122366106367e-09!GO:0016887;ATPase activity;9.49310169552305e-09!GO:0044453;nuclear membrane part;9.85565033584474e-09!GO:0016564;transcription repressor activity;1.02207876452657e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.81130580652697e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.10664404282052e-08!GO:0043566;structure-specific DNA binding;2.23348229738327e-08!GO:0009150;purine ribonucleotide metabolic process;2.8531461747139e-08!GO:0045786;negative regulation of progression through cell cycle;2.91334891441359e-08!GO:0006164;purine nucleotide biosynthetic process;3.0448690289588e-08!GO:0019222;regulation of metabolic process;3.08827518475084e-08!GO:0031324;negative regulation of cellular metabolic process;3.64042727468056e-08!GO:0042981;regulation of apoptosis;3.97772714655224e-08!GO:0048475;coated membrane;4.14101419991573e-08!GO:0030117;membrane coat;4.14101419991573e-08!GO:0006260;DNA replication;4.65048687230829e-08!GO:0009060;aerobic respiration;4.80635734236746e-08!GO:0009260;ribonucleotide biosynthetic process;5.06151930912693e-08!GO:0042623;ATPase activity, coupled;5.06151930912693e-08!GO:0043067;regulation of programmed cell death;5.32156868703501e-08!GO:0015986;ATP synthesis coupled proton transport;5.55715583905547e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.55715583905547e-08!GO:0006364;rRNA processing;6.29554839359117e-08!GO:0004386;helicase activity;6.97044035648462e-08!GO:0030120;vesicle coat;8.07616512409076e-08!GO:0030662;coated vesicle membrane;8.07616512409076e-08!GO:0045333;cellular respiration;8.32576862342405e-08!GO:0009152;purine ribonucleotide biosynthetic process;8.62171487497171e-08!GO:0016072;rRNA metabolic process;9.62209312786097e-08!GO:0005643;nuclear pore;1.00925389686845e-07!GO:0016881;acid-amino acid ligase activity;1.05692703396603e-07!GO:0006606;protein import into nucleus;1.21719448760786e-07!GO:0051170;nuclear import;1.29533131157436e-07!GO:0051188;cofactor biosynthetic process;1.36948026343888e-07!GO:0006916;anti-apoptosis;1.37139567738958e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.65537703674374e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.65537703674374e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.65537703674374e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.65537703674374e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.65537703674374e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.67916804262872e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.67916804262872e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.82667926901471e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.82667926901471e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.82667926901471e-07!GO:0009141;nucleoside triphosphate metabolic process;1.873438809619e-07!GO:0043069;negative regulation of programmed cell death;2.0792323528785e-07!GO:0043066;negative regulation of apoptosis;2.70104905100338e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.82055577256233e-07!GO:0016568;chromatin modification;2.88003925242743e-07!GO:0016481;negative regulation of transcription;3.12612584640051e-07!GO:0009056;catabolic process;3.37678786685522e-07!GO:0043038;amino acid activation;4.15568090886365e-07!GO:0006418;tRNA aminoacylation for protein translation;4.15568090886365e-07!GO:0043039;tRNA aminoacylation;4.15568090886365e-07!GO:0009892;negative regulation of metabolic process;5.21970580428065e-07!GO:0007005;mitochondrion organization and biogenesis;6.12600872993451e-07!GO:0006888;ER to Golgi vesicle-mediated transport;7.19832701117306e-07!GO:0019829;cation-transporting ATPase activity;7.41307849106881e-07!GO:0003714;transcription corepressor activity;7.80318779212393e-07!GO:0003697;single-stranded DNA binding;7.94838647100037e-07!GO:0065002;intracellular protein transport across a membrane;7.94838647100037e-07!GO:0030532;small nuclear ribonucleoprotein complex;8.02804405648906e-07!GO:0006754;ATP biosynthetic process;9.39984222109809e-07!GO:0006753;nucleoside phosphate metabolic process;9.39984222109809e-07!GO:0050657;nucleic acid transport;9.39984222109809e-07!GO:0051236;establishment of RNA localization;9.39984222109809e-07!GO:0050658;RNA transport;9.39984222109809e-07!GO:0043623;cellular protein complex assembly;9.41402513222236e-07!GO:0016469;proton-transporting two-sector ATPase complex;9.50336017845755e-07!GO:0009109;coenzyme catabolic process;1.01896733487603e-06!GO:0003924;GTPase activity;1.06761784871603e-06!GO:0008026;ATP-dependent helicase activity;1.09880266351866e-06!GO:0032446;protein modification by small protein conjugation;1.12151516236622e-06!GO:0006099;tricarboxylic acid cycle;1.1468337981249e-06!GO:0046356;acetyl-CoA catabolic process;1.1468337981249e-06!GO:0046034;ATP metabolic process;1.18288201797205e-06!GO:0006403;RNA localization;1.22663517273006e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.29082584764968e-06!GO:0016567;protein ubiquitination;1.32822041337291e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.33637731234968e-06!GO:0031988;membrane-bound vesicle;1.38196806999184e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.43205478127242e-06!GO:0005667;transcription factor complex;1.7045404734022e-06!GO:0000245;spliceosome assembly;1.75841263479172e-06!GO:0065004;protein-DNA complex assembly;1.90395536478765e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.9364846778997e-06!GO:0016491;oxidoreductase activity;1.9364846778997e-06!GO:0009108;coenzyme biosynthetic process;2.12408726736263e-06!GO:0006752;group transfer coenzyme metabolic process;2.2157236873169e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.53543265493986e-06!GO:0006333;chromatin assembly or disassembly;2.7068121365555e-06!GO:0046930;pore complex;3.04184486953596e-06!GO:0051246;regulation of protein metabolic process;3.24079779720437e-06!GO:0006084;acetyl-CoA metabolic process;3.28928645054027e-06!GO:0051427;hormone receptor binding;3.33383161071802e-06!GO:0006793;phosphorus metabolic process;3.41553792172735e-06!GO:0006796;phosphate metabolic process;3.41553792172735e-06!GO:0044431;Golgi apparatus part;3.6353789682593e-06!GO:0005694;chromosome;3.84031657637756e-06!GO:0051187;cofactor catabolic process;4.92386723680192e-06!GO:0031323;regulation of cellular metabolic process;4.93279315076725e-06!GO:0016740;transferase activity;4.95504353953232e-06!GO:0045259;proton-transporting ATP synthase complex;6.22706787686188e-06!GO:0035257;nuclear hormone receptor binding;7.66035278676147e-06!GO:0003713;transcription coactivator activity;7.73026035056357e-06!GO:0006350;transcription;9.46519021376392e-06!GO:0000278;mitotic cell cycle;1.09819160959371e-05!GO:0000151;ubiquitin ligase complex;1.10834337845105e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.13077185650158e-05!GO:0044440;endosomal part;1.21478934784741e-05!GO:0010008;endosome membrane;1.21478934784741e-05!GO:0065007;biological regulation;1.30569522116958e-05!GO:0005798;Golgi-associated vesicle;1.40814020375086e-05!GO:0031252;leading edge;2.05651707002319e-05!GO:0005770;late endosome;2.09302594659197e-05!GO:0005525;GTP binding;2.30249653933986e-05!GO:0051028;mRNA transport;2.47841695055515e-05!GO:0016563;transcription activator activity;2.54515109705543e-05!GO:0008654;phospholipid biosynthetic process;3.13025972922564e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.47727027976106e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.56066336028846e-05!GO:0031982;vesicle;3.6681015754845e-05!GO:0005762;mitochondrial large ribosomal subunit;3.73797258926563e-05!GO:0000315;organellar large ribosomal subunit;3.73797258926563e-05!GO:0009117;nucleotide metabolic process;3.76008343743956e-05!GO:0005773;vacuole;3.81641236808026e-05!GO:0010468;regulation of gene expression;4.49854514975683e-05!GO:0016310;phosphorylation;4.517984306575e-05!GO:0045892;negative regulation of transcription, DNA-dependent;4.52896631926633e-05!GO:0003724;RNA helicase activity;4.68037389031632e-05!GO:0005839;proteasome core complex (sensu Eukaryota);5.08131155596449e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.14206969629716e-05!GO:0048471;perinuclear region of cytoplasm;5.26354507242554e-05!GO:0000785;chromatin;5.28872892346265e-05!GO:0005769;early endosome;5.44401504162136e-05!GO:0031410;cytoplasmic vesicle;5.44856255607381e-05!GO:0044427;chromosomal part;5.87231023697588e-05!GO:0003690;double-stranded DNA binding;6.17714416134798e-05!GO:0016779;nucleotidyltransferase activity;6.27751476363901e-05!GO:0006613;cotranslational protein targeting to membrane;7.06894536965136e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.08641076352702e-05!GO:0000139;Golgi membrane;7.61150639218184e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;8.2423264568413e-05!GO:0015980;energy derivation by oxidation of organic compounds;9.59341458116102e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000107176538472365!GO:0030133;transport vesicle;0.000107883769499181!GO:0016859;cis-trans isomerase activity;0.000110926860224205!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00011818520890968!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000122569139277009!GO:0006091;generation of precursor metabolites and energy;0.00012978466091924!GO:0008361;regulation of cell size;0.00013817324490754!GO:0000323;lytic vacuole;0.000184007408582473!GO:0005764;lysosome;0.000184007408582473!GO:0005788;endoplasmic reticulum lumen;0.000186505661790206!GO:0043021;ribonucleoprotein binding;0.000190393117698616!GO:0005813;centrosome;0.000193104772260322!GO:0032774;RNA biosynthetic process;0.000193442133770703!GO:0006351;transcription, DNA-dependent;0.000203906851039547!GO:0016197;endosome transport;0.000206998733850899!GO:0016787;hydrolase activity;0.000214255791202902!GO:0016049;cell growth;0.000218677080822508!GO:0004298;threonine endopeptidase activity;0.000254666816873887!GO:0030118;clathrin coat;0.000290768722418719!GO:0051789;response to protein stimulus;0.000300042647040706!GO:0006986;response to unfolded protein;0.000300042647040706!GO:0042802;identical protein binding;0.000307641280921335!GO:0019899;enzyme binding;0.000326404725421257!GO:0032561;guanyl ribonucleotide binding;0.00035460703933182!GO:0019001;guanyl nucleotide binding;0.00035460703933182!GO:0033116;ER-Golgi intermediate compartment membrane;0.000375658811573696!GO:0048522;positive regulation of cellular process;0.00038483493672426!GO:0006402;mRNA catabolic process;0.00040677788144619!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000407931969014813!GO:0035258;steroid hormone receptor binding;0.000418152776164771!GO:0007243;protein kinase cascade;0.000460819806982678!GO:0019867;outer membrane;0.000465557748333729!GO:0031497;chromatin assembly;0.000484280029929855!GO:0016853;isomerase activity;0.000515347348594401!GO:0003729;mRNA binding;0.000522676821957407!GO:0030132;clathrin coat of coated pit;0.000524891922447702!GO:0031968;organelle outer membrane;0.000559559693533525!GO:0005815;microtubule organizing center;0.000561035680819924!GO:0007050;cell cycle arrest;0.000563172055330571!GO:0050662;coenzyme binding;0.000563172055330571!GO:0006334;nucleosome assembly;0.000595917630137053!GO:0005741;mitochondrial outer membrane;0.000601816298865839!GO:0000314;organellar small ribosomal subunit;0.000601816298865839!GO:0005763;mitochondrial small ribosomal subunit;0.000601816298865839!GO:0006612;protein targeting to membrane;0.000620874456155518!GO:0045893;positive regulation of transcription, DNA-dependent;0.000629258360248782!GO:0030867;rough endoplasmic reticulum membrane;0.000633092031655983!GO:0051252;regulation of RNA metabolic process;0.000634679815884627!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000672253761190121!GO:0003899;DNA-directed RNA polymerase activity;0.000697959693509094!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000698958264458679!GO:0005048;signal sequence binding;0.000727147002390784!GO:0045454;cell redox homeostasis;0.000815912963307284!GO:0016363;nuclear matrix;0.000821977111242029!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000836166822462076!GO:0015630;microtubule cytoskeleton;0.000836457877850791!GO:0001558;regulation of cell growth;0.00085831055854506!GO:0030119;AP-type membrane coat adaptor complex;0.00085831055854506!GO:0008186;RNA-dependent ATPase activity;0.000914213788471142!GO:0019843;rRNA binding;0.000971395790121309!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00100889244477573!GO:0046474;glycerophospholipid biosynthetic process;0.00100889244477573!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00100889244477573!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00100889244477573!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00100889244477573!GO:0065009;regulation of a molecular function;0.0010239830849946!GO:0045449;regulation of transcription;0.00103612047045494!GO:0043681;protein import into mitochondrion;0.00105866762218762!GO:0005885;Arp2/3 protein complex;0.00107795475286294!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00112797043097449!GO:0040008;regulation of growth;0.00121465527468333!GO:0008250;oligosaccharyl transferase complex;0.00122286055498277!GO:0006261;DNA-dependent DNA replication;0.00129419472955133!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00139667029017796!GO:0008092;cytoskeletal protein binding;0.00142598857919449!GO:0051168;nuclear export;0.00142598857919449!GO:0051920;peroxiredoxin activity;0.00146822590476007!GO:0004576;oligosaccharyl transferase activity;0.0016140781722277!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0016140781722277!GO:0030658;transport vesicle membrane;0.00169161067430025!GO:0030131;clathrin adaptor complex;0.00171959627598775!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00172373345422943!GO:0006414;translational elongation;0.00174329866503966!GO:0030663;COPI coated vesicle membrane;0.0017813823115478!GO:0030126;COPI vesicle coat;0.0017813823115478!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00184428070477175!GO:0051301;cell division;0.00188955044262996!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00208729857882157!GO:0008629;induction of apoptosis by intracellular signals;0.00215548162451065!GO:0030027;lamellipodium;0.00215727296398273!GO:0006891;intra-Golgi vesicle-mediated transport;0.00217390878924303!GO:0045941;positive regulation of transcription;0.00218177455220459!GO:0045926;negative regulation of growth;0.00220788936458463!GO:0046489;phosphoinositide biosynthetic process;0.00224761704478528!GO:0005905;coated pit;0.00239187785788186!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00247168678102917!GO:0051287;NAD binding;0.00249774248031457!GO:0004004;ATP-dependent RNA helicase activity;0.00255532018856179!GO:0043488;regulation of mRNA stability;0.00256826456455265!GO:0043487;regulation of RNA stability;0.00256826456455265!GO:0051128;regulation of cellular component organization and biogenesis;0.00262789933351165!GO:0006892;post-Golgi vesicle-mediated transport;0.00268429110871899!GO:0008139;nuclear localization sequence binding;0.00270212407607553!GO:0004177;aminopeptidase activity;0.00270853898086055!GO:0030137;COPI-coated vesicle;0.002782723666714!GO:0008033;tRNA processing;0.00291456518708344!GO:0030521;androgen receptor signaling pathway;0.00291514055603969!GO:0003711;transcription elongation regulator activity;0.00292992799025582!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00300875854207571!GO:0022403;cell cycle phase;0.00304898261675927!GO:0006839;mitochondrial transport;0.00313989322099446!GO:0030176;integral to endoplasmic reticulum membrane;0.00313989322099446!GO:0000087;M phase of mitotic cell cycle;0.00318286313682642!GO:0030518;steroid hormone receptor signaling pathway;0.00331518148623008!GO:0000059;protein import into nucleus, docking;0.00341565786317864!GO:0008610;lipid biosynthetic process;0.0034218143762696!GO:0030057;desmosome;0.00344162844370554!GO:0048468;cell development;0.00344264132425674!GO:0007006;mitochondrial membrane organization and biogenesis;0.00350723166022971!GO:0006626;protein targeting to mitochondrion;0.00353208939653589!GO:0009165;nucleotide biosynthetic process;0.00361611613475117!GO:0008286;insulin receptor signaling pathway;0.00368493573727941!GO:0018196;peptidyl-asparagine modification;0.00368493573727941!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00368493573727941!GO:0030036;actin cytoskeleton organization and biogenesis;0.00368493573727941!GO:0045792;negative regulation of cell size;0.00369967007788345!GO:0006354;RNA elongation;0.00379610237008648!GO:0030032;lamellipodium biogenesis;0.00385892310498283!GO:0016044;membrane organization and biogenesis;0.00386296862525461!GO:0006950;response to stress;0.00388710025461875!GO:0006355;regulation of transcription, DNA-dependent;0.00395558897701692!GO:0006289;nucleotide-excision repair;0.00401275489303657!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00401275489303657!GO:0007067;mitosis;0.00411069896274592!GO:0007264;small GTPase mediated signal transduction;0.00411069896274592!GO:0001726;ruffle;0.00420684859308037!GO:0006401;RNA catabolic process;0.00429354908327355!GO:0044452;nucleolar part;0.0043063282034465!GO:0033673;negative regulation of kinase activity;0.00436345275473323!GO:0006469;negative regulation of protein kinase activity;0.00436345275473323!GO:0003684;damaged DNA binding;0.00436345275473323!GO:0008168;methyltransferase activity;0.00439368224067875!GO:0030308;negative regulation of cell growth;0.00439368224067875!GO:0016251;general RNA polymerase II transcription factor activity;0.00444092771334204!GO:0016741;transferase activity, transferring one-carbon groups;0.00459711032706257!GO:0030125;clathrin vesicle coat;0.00495261668340166!GO:0030665;clathrin coated vesicle membrane;0.00495261668340166!GO:0007034;vacuolar transport;0.00508031119625646!GO:0030660;Golgi-associated vesicle membrane;0.00508031119625646!GO:0006352;transcription initiation;0.00535389577975228!GO:0046467;membrane lipid biosynthetic process;0.00544261955826937!GO:0017166;vinculin binding;0.00564382497053889!GO:0003682;chromatin binding;0.00573601022362913!GO:0007010;cytoskeleton organization and biogenesis;0.00598747222612727!GO:0006650;glycerophospholipid metabolic process;0.00615583558773398!GO:0051098;regulation of binding;0.00629340102169547!GO:0051329;interphase of mitotic cell cycle;0.00642077226004142!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00644694162349793!GO:0051101;regulation of DNA binding;0.00652998947949664!GO:0051348;negative regulation of transferase activity;0.00653770962939444!GO:0005869;dynactin complex;0.00690070772168664!GO:0051539;4 iron, 4 sulfur cluster binding;0.0069453619120162!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00697332294526375!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00717405548628961!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00717921333245344!GO:0015399;primary active transmembrane transporter activity;0.00717921333245344!GO:0004674;protein serine/threonine kinase activity;0.00755842905772476!GO:0030384;phosphoinositide metabolic process;0.00764300136616923!GO:0043022;ribosome binding;0.00782861591275637!GO:0015631;tubulin binding;0.00792022960591469!GO:0005856;cytoskeleton;0.00819684660326601!GO:0048500;signal recognition particle;0.00820340354926158!GO:0030031;cell projection biogenesis;0.00843530824827784!GO:0048037;cofactor binding;0.00872204056719006!GO:0006643;membrane lipid metabolic process;0.00892905122066721!GO:0006383;transcription from RNA polymerase III promoter;0.00895853181267998!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00918276319273827!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00918276319273827!GO:0009967;positive regulation of signal transduction;0.00923081242062226!GO:0022890;inorganic cation transmembrane transporter activity;0.00929811396141516!GO:0048487;beta-tubulin binding;0.00947014260149359!GO:0046822;regulation of nucleocytoplasmic transport;0.00949069925270454!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00960517462153039!GO:0003702;RNA polymerase II transcription factor activity;0.0104358536689148!GO:0016126;sterol biosynthetic process;0.0104863186228934!GO:0016408;C-acyltransferase activity;0.0110297382840277!GO:0048518;positive regulation of biological process;0.0110297382840277!GO:0003746;translation elongation factor activity;0.0112130449173851!GO:0008270;zinc ion binding;0.0114415844425953!GO:0051540;metal cluster binding;0.0115933505053157!GO:0051536;iron-sulfur cluster binding;0.0115933505053157!GO:0001533;cornified envelope;0.0117391682098042!GO:0007040;lysosome organization and biogenesis;0.0118862731809771!GO:0006509;membrane protein ectodomain proteolysis;0.0120705851381294!GO:0033619;membrane protein proteolysis;0.0120705851381294!GO:0007041;lysosomal transport;0.0120749538499996!GO:0051325;interphase;0.0121368136504716!GO:0006607;NLS-bearing substrate import into nucleus;0.0124928630324871!GO:0043065;positive regulation of apoptosis;0.0127597543533994!GO:0050681;androgen receptor binding;0.0128717609492676!GO:0008180;signalosome;0.0137571084161919!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0138708307963001!GO:0031901;early endosome membrane;0.0140941023919986!GO:0031625;ubiquitin protein ligase binding;0.0140946738028743!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0141642623012973!GO:0043068;positive regulation of programmed cell death;0.0143010006896683!GO:0030880;RNA polymerase complex;0.0145304908565653!GO:0046983;protein dimerization activity;0.0145304908565653!GO:0008022;protein C-terminus binding;0.0145515385090425!GO:0006979;response to oxidative stress;0.0145653110048564!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0149772293095542!GO:0006376;mRNA splice site selection;0.0150148611091125!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0150148611091125!GO:0008312;7S RNA binding;0.0151702880332155!GO:0030134;ER to Golgi transport vesicle;0.0153302783483892!GO:0016584;nucleosome positioning;0.015376105066589!GO:0006611;protein export from nucleus;0.0157892834320403!GO:0006338;chromatin remodeling;0.0157935572655558!GO:0051338;regulation of transferase activity;0.0158637664210774!GO:0031902;late endosome membrane;0.0158771823458671!GO:0008287;protein serine/threonine phosphatase complex;0.0158771823458671!GO:0045045;secretory pathway;0.0159959619712938!GO:0051087;chaperone binding;0.015997575902895!GO:0043414;biopolymer methylation;0.0163053954370548!GO:0006818;hydrogen transport;0.0168826487772416!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0169396569985133!GO:0045047;protein targeting to ER;0.0169396569985133!GO:0031072;heat shock protein binding;0.0171306502839391!GO:0015992;proton transport;0.0173140239267664!GO:0050790;regulation of catalytic activity;0.0173565304294238!GO:0006644;phospholipid metabolic process;0.0174655876784738!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0174954258798237!GO:0035035;histone acetyltransferase binding;0.017808439689024!GO:0030216;keratinocyte differentiation;0.0178266032693099!GO:0006695;cholesterol biosynthetic process;0.0184313868163436!GO:0000209;protein polyubiquitination;0.0188202701392312!GO:0030029;actin filament-based process;0.0193842594604061!GO:0043256;laminin complex;0.0193842594604061!GO:0005811;lipid particle;0.0194392978018318!GO:0030522;intracellular receptor-mediated signaling pathway;0.0194495444908211!GO:0006497;protein amino acid lipidation;0.0197451092527676!GO:0022415;viral reproductive process;0.0200735635048521!GO:0005684;U2-dependent spliceosome;0.0202485952279964!GO:0009116;nucleoside metabolic process;0.0202886425782458!GO:0042158;lipoprotein biosynthetic process;0.0204176596913556!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0204176596913556!GO:0015002;heme-copper terminal oxidase activity;0.0204176596913556!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0204176596913556!GO:0004129;cytochrome-c oxidase activity;0.0204176596913556!GO:0006506;GPI anchor biosynthetic process;0.0206905332207999!GO:0001952;regulation of cell-matrix adhesion;0.0206905332207999!GO:0046914;transition metal ion binding;0.020849175981116!GO:0046426;negative regulation of JAK-STAT cascade;0.020849175981116!GO:0004527;exonuclease activity;0.0212460764149309!GO:0030041;actin filament polymerization;0.021397613556944!GO:0030127;COPII vesicle coat;0.0216364177826934!GO:0012507;ER to Golgi transport vesicle membrane;0.0216364177826934!GO:0006672;ceramide metabolic process;0.0216918209164567!GO:0009112;nucleobase metabolic process;0.0217815033422418!GO:0006505;GPI anchor metabolic process;0.0217919450687892!GO:0007033;vacuole organization and biogenesis;0.021800695106347!GO:0051059;NF-kappaB binding;0.021800695106347!GO:0008333;endosome to lysosome transport;0.021800695106347!GO:0005832;chaperonin-containing T-complex;0.0218553000511718!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0225462804996037!GO:0006595;polyamine metabolic process;0.0230980307905809!GO:0004722;protein serine/threonine phosphatase activity;0.0236604009348723!GO:0032507;maintenance of cellular protein localization;0.0236604009348723!GO:0007004;telomere maintenance via telomerase;0.0237525138726287!GO:0043284;biopolymer biosynthetic process;0.0238536844080874!GO:0045603;positive regulation of endothelial cell differentiation;0.0239009109200037!GO:0044262;cellular carbohydrate metabolic process;0.0244172071309126!GO:0009303;rRNA transcription;0.0245308191871389!GO:0005791;rough endoplasmic reticulum;0.0245985569916387!GO:0046483;heterocycle metabolic process;0.0257263305460963!GO:0031124;mRNA 3'-end processing;0.0261149622754785!GO:0008243;plasminogen activator activity;0.0261267058491229!GO:0032984;macromolecular complex disassembly;0.0262741750291833!GO:0006302;double-strand break repair;0.0265736324161449!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0265736324161449!GO:0000428;DNA-directed RNA polymerase complex;0.0265736324161449!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0270396229246001!GO:0031529;ruffle organization and biogenesis;0.0271145017424313!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0271298395191107!GO:0005637;nuclear inner membrane;0.0271298395191107!GO:0042770;DNA damage response, signal transduction;0.0271849879412093!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0278815107772329!GO:0010257;NADH dehydrogenase complex assembly;0.0278815107772329!GO:0033108;mitochondrial respiratory chain complex assembly;0.0278815107772329!GO:0043492;ATPase activity, coupled to movement of substances;0.0279139757725693!GO:0043549;regulation of kinase activity;0.0279554590914662!GO:0040029;regulation of gene expression, epigenetic;0.0284523592440566!GO:0000049;tRNA binding;0.0284523592440566!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0295288038868236!GO:0008097;5S rRNA binding;0.0299886664791949!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0300171821801819!GO:0005912;adherens junction;0.0302051871095355!GO:0000287;magnesium ion binding;0.0305317471090394!GO:0000339;RNA cap binding;0.0308386528985446!GO:0032200;telomere organization and biogenesis;0.0320053470887825!GO:0000723;telomere maintenance;0.0320053470887825!GO:0045936;negative regulation of phosphate metabolic process;0.0323951727820006!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0324608892062872!GO:0016272;prefoldin complex;0.0327322028265094!GO:0006284;base-excision repair;0.0339226643234595!GO:0045334;clathrin-coated endocytic vesicle;0.0349772416245819!GO:0000781;chromosome, telomeric region;0.0349772416245819!GO:0008426;protein kinase C inhibitor activity;0.0359849016599984!GO:0004563;beta-N-acetylhexosaminidase activity;0.0360453482031944!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0363513610244101!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0363513610244101!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0363513610244101!GO:0046519;sphingoid metabolic process;0.036545718192623!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0372145134499408!GO:0000118;histone deacetylase complex;0.0372145134499408!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0374780104367752!GO:0032259;methylation;0.0378061046520769!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0380230192610133!GO:0006405;RNA export from nucleus;0.0380230192610133!GO:0051052;regulation of DNA metabolic process;0.0386155906021434!GO:0008601;protein phosphatase type 2A regulator activity;0.03899906134653!GO:0032508;DNA duplex unwinding;0.0390518432610046!GO:0032392;DNA geometric change;0.0390518432610046!GO:0006118;electron transport;0.0396786935440868!GO:0045737;positive regulation of cyclin-dependent protein kinase activity;0.0406443735128551!GO:0006144;purine base metabolic process;0.0406443735128551!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0407949585082012!GO:0043241;protein complex disassembly;0.0408185357206702!GO:0005862;muscle thin filament tropomyosin;0.0409293043967798!GO:0046966;thyroid hormone receptor binding;0.0410731134528581!GO:0008632;apoptotic program;0.0412660349309315!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0413063838357933!GO:0033043;regulation of organelle organization and biogenesis;0.0413063838357933!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0413681028256014!GO:0008538;proteasome activator activity;0.0418443406911969!GO:0000159;protein phosphatase type 2A complex;0.041891400074808!GO:0004300;enoyl-CoA hydratase activity;0.0423772588487283!GO:0030911;TPR domain binding;0.0429525359036942!GO:0030508;thiol-disulfide exchange intermediate activity;0.0433454524884042!GO:0016791;phosphoric monoester hydrolase activity;0.0434561097123832!GO:0044438;microbody part;0.0438895709245139!GO:0044439;peroxisomal part;0.0438895709245139!GO:0005669;transcription factor TFIID complex;0.0447681428091196!GO:0051270;regulation of cell motility;0.0459301864352629!GO:0003678;DNA helicase activity;0.0466568356397875!GO:0022408;negative regulation of cell-cell adhesion;0.0471643937115816!GO:0051651;maintenance of cellular localization;0.0471745277686995!GO:0005657;replication fork;0.0478094963100883!GO:0030659;cytoplasmic vesicle membrane;0.0479266597278675!GO:0006740;NADPH regeneration;0.0480749634146001!GO:0006098;pentose-phosphate shunt;0.0480749634146001!GO:0000096;sulfur amino acid metabolic process;0.0481162188771485!GO:0005938;cell cortex;0.0485131680169694!GO:0045859;regulation of protein kinase activity;0.0487650866827445!GO:0030140;trans-Golgi network transport vesicle;0.0488478698908304!GO:0008017;microtubule binding;0.0488478698908304!GO:0016301;kinase activity;0.0489880088930309!GO:0015248;sterol transporter activity;0.049644850947778 | |||
|sample_id=11772 | |sample_id=11772 | ||
|sample_note= | |sample_note= | ||
|sample_sex=female | |sample_sex=female | ||
|sample_species= | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue=parotid gland | |sample_tissue=parotid gland | ||
|top_motifs=TP53:3.08387697545;NKX2-1,4:2.37162968955;PAX1,9:1.76282555855;ONECUT1,2:1.72374867907;PDX1:1.55965400402;FOXO1,3,4:1.54416104916;CDC5L:1.53494807501;HOX{A4,D4}:1.47994406808;TBX4,5:1.45113823096;ARID5B:1.21235863317;TBP:1.16404956712;PPARG:1.15732601338;FOXM1:1.11851419038;ZBTB16:1.08573163269;TEF:1.05606201004;BPTF:1.0445536209;AR:1.00789421572;EVI1:0.983680334092;UFEwm:0.962600090285;ZBTB6:0.944143077092;VSX1,2:0.937554800007;POU6F1:0.898777672092;TFAP2{A,C}:0.833602067581;ZNF423:0.80265073663;bHLH_family:0.785446996086;TEAD1:0.778936961632;NR3C1:0.718575090808;RBPJ:0.695928136226;HIF1A:0.694158449285;SNAI1..3:0.685793546734;FOXN1:0.676258737933;GTF2A1,2:0.671544344927;SMAD1..7,9:0.658428474543;CDX1,2,4:0.64823837115;TLX2:0.600626029102;NKX2-3_NKX2-5:0.575282036468;SP1:0.560805996429;SOX17:0.530985228569;IKZF1:0.503412101312;TOPORS:0.494748317419;ZNF384:0.487227079283;KLF4:0.486458948759;PAX5:0.481545961381;MAZ:0.472439568908;ZIC1..3:0.456051520011;ZEB1:0.450846713893;STAT1,3:0.444174480563;RXR{A,B,G}:0.413188009184;ALX4:0.385450359592;MED-1{core}:0.374681066528;FOX{I1,J2}:0.373234474082;HMX1:0.36227092211;NR1H4:0.352758583343;GATA4:0.331712313767;EGR1..3:0.327887740939;AIRE:0.321556803581;MYBL2:0.303071055527;TFDP1:0.299381407242;GFI1:0.288304943671;MYOD1:0.286823543257;FOS_FOS{B,L1}_JUN{B,D}:0.283562649037;REST:0.271825011512;GZF1:0.264705157005;FOX{F1,F2,J1}:0.264151480462;STAT5{A,B}:0.237540180094;YY1:0.237105680601;NR6A1:0.23664007052;FOX{D1,D2}:0.22809372777;ESRRA:0.204358293028;ZNF143:0.203037052336;MYFfamily:0.197281113476;IKZF2:0.195776115634;POU1F1:0.183407471411;MTF1:0.177910954381;RFX2..5_RFXANK_RFXAP:0.166323614734;CEBPA,B_DDIT3:0.144711098106;TLX1..3_NFIC{dimer}:0.142662949907;GFI1B:0.133671061939;NKX6-1,2:0.120832320088;GTF2I:0.119803318739;PAX4:0.11074459518;XCPE1{core}:0.0990443084699;MTE{core}:0.0687199959175;ELK1,4_GABP{A,B1}:0.0676905790962;TFCP2:0.0330445611956;BACH2:0.0159509460411;TFAP4:0.0116060938508;GLI1..3:0.00458317335582;T:-0.00468265852409;LMO2:-0.0152235356198;NKX2-2,8:-0.0205040879286;RORA:-0.0447197873965;ZNF238:-0.0499632788644;ADNP_IRX_SIX_ZHX:-0.0517776927373;EP300:-0.0543061682976;HIC1:-0.0648612652672;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.080389769371;MAFB:-0.0949887053525;SOX5:-0.0972296760261;NRF1:-0.10982482924;GCM1,2:-0.110558605083;HMGA1,2:-0.117183776971;HNF4A_NR2F1,2:-0.119429968127;FOXQ1:-0.121892301069;DBP:-0.126905107657;FOSL2:-0.140413278826;FOXP3:-0.142442372442;NFIL3:-0.152984768043;ESR1:-0.156034665968;HSF1,2:-0.157522349539;NHLH1,2:-0.157748073856;PAX6:-0.15912895922;BREu{core}:-0.160873814853;ALX1:-0.177546032593;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.18072048448;TFAP2B:-0.181645844643;EBF1:-0.20534354434;SOX2:-0.215616250066;IRF7:-0.215831832121;NFE2L1:-0.216745761329;RREB1:-0.219288695723;PRDM1:-0.232095419985;RFX1:-0.253229310749;ZFP161:-0.261036789624;HNF1A:-0.261435785753;LEF1_TCF7_TCF7L1,2:-0.263163993739;HLF:-0.265081992399;E2F1..5:-0.277170580835;MZF1:-0.278424263543;PITX1..3:-0.28292198008;ZNF148:-0.28706723519;NFE2:-0.307603212479;NFIX:-0.320518494255;NFKB1_REL_RELA:-0.3350909469;NKX3-1:-0.340418753877;TAL1_TCF{3,4,12}:-0.353747371367;NFATC1..3:-0.358280233139;SPZ1:-0.371175638277;POU2F1..3:-0.371307701729;PATZ1:-0.384786735761;TGIF1:-0.415755799254;SREBF1,2:-0.424407388945;FOXP1:-0.430042764753;ATF4:-0.47078722355;ELF1,2,4:-0.47166659527;ATF5_CREB3:-0.472387743859;PAX2:-0.475121473815;HES1:-0.481009932715;NR5A1,2:-0.483038909078;CUX2:-0.500075933213;NFY{A,B,C}:-0.507888439258;HOX{A6,A7,B6,B7}:-0.508496370761;ATF2:-0.511934196448;NANOG{mouse}:-0.522808236995;OCT4_SOX2{dimer}:-0.523276434318;CREB1:-0.524402097924;EN1,2:-0.530459023953;AHR_ARNT_ARNT2:-0.531401824517;RXRA_VDR{dimer}:-0.532796087507;HBP1_HMGB_SSRP1_UBTF:-0.568607471729;SRF:-0.587029281006;CRX:-0.594578452001;MEF2{A,B,C,D}:-0.620392526432;FOXL1:-0.623334916704;HOX{A5,B5}:-0.628115662506;POU5F1:-0.640489877001;SPI1:-0.654998469837;SPIB:-0.656741106113;FOXD3:-0.667662768299;GATA6:-0.671860382698;JUN:-0.676239599542;NKX3-2:-0.70497282781;FOXA2:-0.721051302354;LHX3,4:-0.729892588019;ETS1,2:-0.798175264353;RUNX1..3:-0.799599834922;NFE2L2:-0.803538098801;IRF1,2:-0.814890007084;HAND1,2:-0.823243184628;POU3F1..4:-0.830405772505;ATF6:-0.830855401743;STAT2,4,6:-0.843898910613;MYB:-0.861694068346;NANOG:-0.87775507837;DMAP1_NCOR{1,2}_SMARC:-0.913319708298;SOX{8,9,10}:-0.96230726952;PRRX1,2:-1.01199515966;PAX8:-1.12883126509;PAX3,7:-1.19847373088;PBX1:-1.28370934799;XBP1:-1.49899465504;HOXA9_MEIS1:-1.66044251938 | |top_motifs=TP53:3.08387697545;NKX2-1,4:2.37162968955;PAX1,9:1.76282555855;ONECUT1,2:1.72374867907;PDX1:1.55965400402;FOXO1,3,4:1.54416104916;CDC5L:1.53494807501;HOX{A4,D4}:1.47994406808;TBX4,5:1.45113823096;ARID5B:1.21235863317;TBP:1.16404956712;PPARG:1.15732601338;FOXM1:1.11851419038;ZBTB16:1.08573163269;TEF:1.05606201004;BPTF:1.0445536209;AR:1.00789421572;EVI1:0.983680334092;UFEwm:0.962600090285;ZBTB6:0.944143077092;VSX1,2:0.937554800007;POU6F1:0.898777672092;TFAP2{A,C}:0.833602067581;ZNF423:0.80265073663;bHLH_family:0.785446996086;TEAD1:0.778936961632;NR3C1:0.718575090808;RBPJ:0.695928136226;HIF1A:0.694158449285;SNAI1..3:0.685793546734;FOXN1:0.676258737933;GTF2A1,2:0.671544344927;SMAD1..7,9:0.658428474543;CDX1,2,4:0.64823837115;TLX2:0.600626029102;NKX2-3_NKX2-5:0.575282036468;SP1:0.560805996429;SOX17:0.530985228569;IKZF1:0.503412101312;TOPORS:0.494748317419;ZNF384:0.487227079283;KLF4:0.486458948759;PAX5:0.481545961381;MAZ:0.472439568908;ZIC1..3:0.456051520011;ZEB1:0.450846713893;STAT1,3:0.444174480563;RXR{A,B,G}:0.413188009184;ALX4:0.385450359592;MED-1{core}:0.374681066528;FOX{I1,J2}:0.373234474082;HMX1:0.36227092211;NR1H4:0.352758583343;GATA4:0.331712313767;EGR1..3:0.327887740939;AIRE:0.321556803581;MYBL2:0.303071055527;TFDP1:0.299381407242;GFI1:0.288304943671;MYOD1:0.286823543257;FOS_FOS{B,L1}_JUN{B,D}:0.283562649037;REST:0.271825011512;GZF1:0.264705157005;FOX{F1,F2,J1}:0.264151480462;STAT5{A,B}:0.237540180094;YY1:0.237105680601;NR6A1:0.23664007052;FOX{D1,D2}:0.22809372777;ESRRA:0.204358293028;ZNF143:0.203037052336;MYFfamily:0.197281113476;IKZF2:0.195776115634;POU1F1:0.183407471411;MTF1:0.177910954381;RFX2..5_RFXANK_RFXAP:0.166323614734;CEBPA,B_DDIT3:0.144711098106;TLX1..3_NFIC{dimer}:0.142662949907;GFI1B:0.133671061939;NKX6-1,2:0.120832320088;GTF2I:0.119803318739;PAX4:0.11074459518;XCPE1{core}:0.0990443084699;MTE{core}:0.0687199959175;ELK1,4_GABP{A,B1}:0.0676905790962;TFCP2:0.0330445611956;BACH2:0.0159509460411;TFAP4:0.0116060938508;GLI1..3:0.00458317335582;T:-0.00468265852409;LMO2:-0.0152235356198;NKX2-2,8:-0.0205040879286;RORA:-0.0447197873965;ZNF238:-0.0499632788644;ADNP_IRX_SIX_ZHX:-0.0517776927373;EP300:-0.0543061682976;HIC1:-0.0648612652672;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.080389769371;MAFB:-0.0949887053525;SOX5:-0.0972296760261;NRF1:-0.10982482924;GCM1,2:-0.110558605083;HMGA1,2:-0.117183776971;HNF4A_NR2F1,2:-0.119429968127;FOXQ1:-0.121892301069;DBP:-0.126905107657;FOSL2:-0.140413278826;FOXP3:-0.142442372442;NFIL3:-0.152984768043;ESR1:-0.156034665968;HSF1,2:-0.157522349539;NHLH1,2:-0.157748073856;PAX6:-0.15912895922;BREu{core}:-0.160873814853;ALX1:-0.177546032593;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.18072048448;TFAP2B:-0.181645844643;EBF1:-0.20534354434;SOX2:-0.215616250066;IRF7:-0.215831832121;NFE2L1:-0.216745761329;RREB1:-0.219288695723;PRDM1:-0.232095419985;RFX1:-0.253229310749;ZFP161:-0.261036789624;HNF1A:-0.261435785753;LEF1_TCF7_TCF7L1,2:-0.263163993739;HLF:-0.265081992399;E2F1..5:-0.277170580835;MZF1:-0.278424263543;PITX1..3:-0.28292198008;ZNF148:-0.28706723519;NFE2:-0.307603212479;NFIX:-0.320518494255;NFKB1_REL_RELA:-0.3350909469;NKX3-1:-0.340418753877;TAL1_TCF{3,4,12}:-0.353747371367;NFATC1..3:-0.358280233139;SPZ1:-0.371175638277;POU2F1..3:-0.371307701729;PATZ1:-0.384786735761;TGIF1:-0.415755799254;SREBF1,2:-0.424407388945;FOXP1:-0.430042764753;ATF4:-0.47078722355;ELF1,2,4:-0.47166659527;ATF5_CREB3:-0.472387743859;PAX2:-0.475121473815;HES1:-0.481009932715;NR5A1,2:-0.483038909078;CUX2:-0.500075933213;NFY{A,B,C}:-0.507888439258;HOX{A6,A7,B6,B7}:-0.508496370761;ATF2:-0.511934196448;NANOG{mouse}:-0.522808236995;OCT4_SOX2{dimer}:-0.523276434318;CREB1:-0.524402097924;EN1,2:-0.530459023953;AHR_ARNT_ARNT2:-0.531401824517;RXRA_VDR{dimer}:-0.532796087507;HBP1_HMGB_SSRP1_UBTF:-0.568607471729;SRF:-0.587029281006;CRX:-0.594578452001;MEF2{A,B,C,D}:-0.620392526432;FOXL1:-0.623334916704;HOX{A5,B5}:-0.628115662506;POU5F1:-0.640489877001;SPI1:-0.654998469837;SPIB:-0.656741106113;FOXD3:-0.667662768299;GATA6:-0.671860382698;JUN:-0.676239599542;NKX3-2:-0.70497282781;FOXA2:-0.721051302354;LHX3,4:-0.729892588019;ETS1,2:-0.798175264353;RUNX1..3:-0.799599834922;NFE2L2:-0.803538098801;IRF1,2:-0.814890007084;HAND1,2:-0.823243184628;POU3F1..4:-0.830405772505;ATF6:-0.830855401743;STAT2,4,6:-0.843898910613;MYB:-0.861694068346;NANOG:-0.87775507837;DMAP1_NCOR{1,2}_SMARC:-0.913319708298;SOX{8,9,10}:-0.96230726952;PRRX1,2:-1.01199515966;PAX8:-1.12883126509;PAX3,7:-1.19847373088;PBX1:-1.28370934799;XBP1:-1.49899465504;HOXA9_MEIS1:-1.66044251938 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11772-123I8;search_select_hide=table117:FF:11772-123I8 | |||
}} | }} | ||
Latest revision as of 18:19, 4 June 2020
| Name: | salivary acinar cells, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12811 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12811
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12811
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.46 |
| 10 | 10 | 0.127 |
| 100 | 100 | 0.739 |
| 101 | 101 | 0.435 |
| 102 | 102 | 0.373 |
| 103 | 103 | 0.681 |
| 104 | 104 | 0.837 |
| 105 | 105 | 0.574 |
| 106 | 106 | 0.763 |
| 107 | 107 | 0.663 |
| 108 | 108 | 0.713 |
| 109 | 109 | 0.552 |
| 11 | 11 | 0.456 |
| 110 | 110 | 0.801 |
| 111 | 111 | 0.66 |
| 112 | 112 | 0.507 |
| 113 | 113 | 0.0175 |
| 114 | 114 | 0.932 |
| 115 | 115 | 0.319 |
| 116 | 116 | 0.87 |
| 117 | 117 | 0.448 |
| 118 | 118 | 0.768 |
| 119 | 119 | 0.844 |
| 12 | 12 | 0.0833 |
| 120 | 120 | 0.113 |
| 121 | 121 | 0.672 |
| 122 | 122 | 0.251 |
| 123 | 123 | 0.112 |
| 124 | 124 | 0.00295 |
| 125 | 125 | 0.956 |
| 126 | 126 | 0.512 |
| 127 | 127 | 0.783 |
| 128 | 128 | 0.359 |
| 129 | 129 | 0.729 |
| 13 | 13 | 0.386 |
| 130 | 130 | 0.257 |
| 131 | 131 | 0.863 |
| 132 | 132 | 0.0115 |
| 133 | 133 | 0.0936 |
| 134 | 134 | 0.282 |
| 135 | 135 | 0.213 |
| 136 | 136 | 0.0352 |
| 137 | 137 | 0.0204 |
| 138 | 138 | 0.511 |
| 139 | 139 | 0.594 |
| 14 | 14 | 0.786 |
| 140 | 140 | 0.278 |
| 141 | 141 | 0.424 |
| 142 | 142 | 0.512 |
| 143 | 143 | 0.0183 |
| 144 | 144 | 0.383 |
| 145 | 145 | 0.957 |
| 146 | 146 | 0.956 |
| 147 | 147 | 0.385 |
| 148 | 148 | 0.179 |
| 149 | 149 | 0.932 |
| 15 | 15 | 0.129 |
| 150 | 150 | 0.732 |
| 151 | 151 | 0.987 |
| 152 | 152 | 0.167 |
| 153 | 153 | 0.579 |
| 154 | 154 | 0.643 |
| 155 | 155 | 0.277 |
| 156 | 156 | 0.245 |
| 157 | 157 | 0.923 |
| 158 | 158 | 0.0514 |
| 159 | 159 | 0.31 |
| 16 | 16 | 0.467 |
| 160 | 160 | 0.906 |
| 161 | 161 | 0.19 |
| 162 | 162 | 0.139 |
| 163 | 163 | 0.956 |
| 164 | 164 | 0.896 |
| 165 | 165 | 0.443 |
| 166 | 166 | 0.104 |
| 167 | 167 | 0.634 |
| 168 | 168 | 0.946 |
| 169 | 169 | 0.823 |
| 17 | 17 | 0.918 |
| 18 | 18 | 0.318 |
| 19 | 19 | 0.443 |
| 2 | 2 | 0.432 |
| 20 | 20 | 0.391 |
| 21 | 21 | 0.242 |
| 22 | 22 | 0.58 |
| 23 | 23 | 0.139 |
| 24 | 24 | 0.107 |
| 25 | 25 | 0.252 |
| 26 | 26 | 0.752 |
| 27 | 27 | 0.596 |
| 28 | 28 | 0.978 |
| 29 | 29 | 0.46 |
| 3 | 3 | 0.914 |
| 30 | 30 | 0.568 |
| 31 | 31 | 0.717 |
| 32 | 32 | 0.931 |
| 33 | 33 | 0.797 |
| 34 | 34 | 0.0614 |
| 35 | 35 | 0.229 |
| 36 | 36 | 0.00527 |
| 37 | 37 | 0.811 |
| 38 | 38 | 0.753 |
| 39 | 39 | 0.365 |
| 4 | 4 | 0.104 |
| 40 | 40 | 0.0197 |
| 41 | 41 | 0.0993 |
| 42 | 42 | 0.489 |
| 43 | 43 | 0.272 |
| 44 | 44 | 0.149 |
| 45 | 45 | 0.552 |
| 46 | 46 | 0.609 |
| 47 | 47 | 0.225 |
| 48 | 48 | 0.921 |
| 49 | 49 | 0.0429 |
| 5 | 5 | 0.182 |
| 50 | 50 | 0.72 |
| 51 | 51 | 0.847 |
| 52 | 52 | 0.511 |
| 53 | 53 | 0.0507 |
| 54 | 54 | 0.816 |
| 55 | 55 | 0.578 |
| 56 | 56 | 0.821 |
| 57 | 57 | 0.757 |
| 58 | 58 | 0.44 |
| 59 | 59 | 0.194 |
| 6 | 6 | 0.544 |
| 60 | 60 | 0.544 |
| 61 | 61 | 0.186 |
| 62 | 62 | 0.188 |
| 63 | 63 | 0.783 |
| 64 | 64 | 0.279 |
| 65 | 65 | 0.907 |
| 66 | 66 | 0.265 |
| 67 | 67 | 0.26 |
| 68 | 68 | 0.698 |
| 69 | 69 | 0.164 |
| 7 | 7 | 0.187 |
| 70 | 70 | 0.636 |
| 71 | 71 | 0.664 |
| 72 | 72 | 0.774 |
| 73 | 73 | 0.168 |
| 74 | 74 | 0.0137 |
| 75 | 75 | 0.475 |
| 76 | 76 | 0.566 |
| 77 | 77 | 0.678 |
| 78 | 78 | 0.427 |
| 79 | 79 | 0.993 |
| 8 | 8 | 0.412 |
| 80 | 80 | 0.209 |
| 81 | 81 | 0.874 |
| 82 | 82 | 0.467 |
| 83 | 83 | 0.186 |
| 84 | 84 | 0.0308 |
| 85 | 85 | 0.886 |
| 86 | 86 | 0.379 |
| 87 | 87 | 0.422 |
| 88 | 88 | 0.89 |
| 89 | 89 | 0.881 |
| 9 | 9 | 0.313 |
| 90 | 90 | 0.616 |
| 91 | 91 | 0.921 |
| 92 | 92 | 0.915 |
| 93 | 93 | 0.771 |
| 94 | 94 | 0.171 |
| 95 | 95 | 0.0716 |
| 96 | 96 | 0.347 |
| 97 | 97 | 0.894 |
| 98 | 98 | 0.791 |
| 99 | 99 | 0.395 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12811
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000150 (glandular epithelial cell)
0000154 (protein secreting cell)
0000255 (eukaryotic cell)
0000622 (acinar cell)
0002076 (endo-epithelial cell)
0002251 (epithelial cell of alimentary canal)
0002623 (acinar cell of salivary gland)
UBERON: Anatomy
0000468 (multi-cellular organism)
0001044 (saliva-secreting gland)
0000033 (head)
0001007 (digestive system)
0004121 (ectoderm-derived structure)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000161 (orifice)
0001444 (subdivision of head)
0002553 (anatomical cavity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003293 (gland of oral region)
0003294 (gland of foregut)
0002365 (exocrine gland)
0000464 (anatomical space)
0002530 (gland)
0010047 (oral gland)
0003408 (gland of gut)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001004 (respiratory system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000165 (mouth)
0001041 (foregut)
0000166 (oral opening)
0000167 (oral cavity)
0002330 (exocrine system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000278 (human salivary acinar cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000223 (endodermal cell)
