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(Created page with "{{f5samples |id=FF:11791-124B9 |name=CD4+CD25-CD45RA+ memory conventional T cells expanded, donor1 |sample_id=11791 |rna_tube_id=124B9 |rna_box=124 |rna_position=B9 |sa...")
 
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{{f5samples
{{f5samples
|id=FF:11791-124B9
|DRA_sample_Accession=CAGE@SAMD00005479
|name=CD4+CD25-CD45RA+ memory conventional T cells expanded, donor1
|accession_numbers=CAGE;DRX008187;DRR009059;DRZ000484;DRZ001869;DRZ011834;DRZ013219
|sample_id=11791
|ancestors_in_anatomy_facet=
|rna_tube_id=124B9
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
|rna_box=124
|rna_position=B9
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=11.00000
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=25
|sample_ethnicity=
|rna_rin=
|rna_od260/230=0.46000
|rna_od260/280=2.00000
|sample_cell_type=T cell
|sample_cell_line=
|sample_collaboration=Michael Rehli (University of Regensberg)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=2.87640
|rna_concentration=0.28764
|sample_note=
|profile_hcage=CNhs13202,LSID1004,release012,MAPPING
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000624,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000805,CL:0000806,CL:0000807,CL:0000808,CL:0000809,CL:0000810,CL:0000813,CL:0000827,CL:0000837,CL:0000838,CL:0000893,CL:0000894,CL:0000895,CL:0000896,CL:0000897,CL:0000898,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420,CL:0002425,CL:0002427,CL:0002428,CL:0002429,CL:0002431,CL:0002432,CL:0002433,CL:0002436,CL:0002489
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000065,UBERON:0000072,UBERON:0000077,UBERON:0000078,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000490,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000925,UBERON:0000926,UBERON:0000949,UBERON:0000974,UBERON:0001004,UBERON:0001007,UBERON:0001041,UBERON:0001042,UBERON:0001048,UBERON:0001062,UBERON:0001555,UBERON:0001557,UBERON:0002050,UBERON:0002193,UBERON:0002342,UBERON:0002346,UBERON:0002368,UBERON:0002370,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002530,UBERON:0002532,UBERON:0003075,UBERON:0003104,UBERON:0003295,UBERON:0003351,UBERON:0003408,UBERON:0003929,UBERON:0004119,UBERON:0004120,UBERON:0004121,UBERON:0004177,UBERON:0004185,UBERON:0004807,UBERON:0004921,UBERON:0005057,UBERON:0005058,UBERON:0005291,UBERON:0005423,UBERON:0005428,UBERON:0005434,UBERON:0005562,UBERON:0005911,UBERON:0006562,UBERON:0006598,UBERON:0007026,UBERON:0007284,UBERON:0007690,UBERON:0009113,UBERON:0009142,UBERON:0009145
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001
 
|comment=Previously: CD4-positiveCD25-CD45RA+ memory conventional T cells expanded, donor1. TODO: full classification
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr4:109087445..109087463,-!p1@LEF1!1.84!68.39!LEF1;;chr2:192015701..192015743,-!p1@STAT4!1.79!82.01!STAT4;;chr7:50343634..50343717,+!p2@IKZF1!1.76!56.22!IKZF1;;chr2:231090433..231090469,+!p1@SP140!1.76!55.93!SP140;;chr2:192015750..192015793,-!p2@STAT4!1.71!66.65!STAT4;;chr10:8096631..8096660,+!p1@GATA3!1.68!56.51!GATA3;;chr5:133451294..133451310,+!p2@TCF7!1.59!38.25!TCF7;;chr3:63953435..63953499,+!p1@ATXN7!1.58!36.80!ATXN7;;chr10:8096772..8096787,+!p2@GATA3!1.55!40.86!GATA3;;chr1:25291475..25291511,-!p2@RUNX3!1.55!34.49!RUNX3;;chr6:391743..391759,+!p1@IRF4!1.53!33.04!IRF4;;chr7:50344289..50344323,+!p1@IKZF1!1.53!33.04!IKZF1;;chr5:133450365..133450444,+!p1@TCF7!1.51!138.53!TCF7;;chr9:117150254..117150271,-!p1@AKNA!1.48!77.38!AKNA;;chr3:18480217..18480239,-!p3@SATB1!1.48!29.27!SATB1;;chr3:71355163..71355209,-!p5@FOXP1!1.47!38.83!FOXP1;;chr3:18486354..18486377,-!p2@SATB1!1.43!32.46!SATB1;;chr2:231090471..231090504,+!p2@SP140!1.42!25.21!SP140;;chrY:21906594..21906622,-!p1@KDM5D!1.42!25.21!KDM5D;;chr20:50159198..50159299,-!p1@NFATC2!1.39!34.20!NFATC2;;chr4:109089901..109089930,-!p3@LEF1!1.38!22.89!LEF1;;chr7:50348268..50348366,+!p4@IKZF1!1.36!21.74!IKZF1;;chr7:50343895..50343936,+!p5@IKZF1!1.35!21.45!IKZF1;;chr16:68119324..68119364,+!p1@NFATC3!1.34!91.29!NFATC3;;chr14:75988771..75988826,+!p1@BATF!1.34!27.53!BATF;;chr8:60031619..60031676,-!p1@TOX!1.33!43.18!TOX;;chr7:50344251..50344288,+!p3@IKZF1!1.31!19.42!IKZF1;;chr20:56195474..56195506,-!p1@ZBP1!1.30!19.13!ZBP1;;chr19:19729477..19729542,-!p1@PBX4!1.23!33.62!PBX4;;chr13:41593425..41593480,-!p1@ELF1!1.22!98.82!ELF1;;chr1:92951607..92951661,-!p1@GFI1!1.21!15.36!GFI1;;chr17:38020392..38020477,-!p1@IKZF3!1.18!14.20!IKZF3;;chr21:36421535..36421610,-!p2@RUNX1!1.16!47.24!RUNX1;;chr6:91006518..91006570,-!p1@BACH2!1.14!29.56!BACH2;;chr6:106546808..106546833,+!p3@PRDM1!1.13!15.65!PRDM1;;chr12:56415246..56415286,+!p2@IKZF4!1.12!12.17!IKZF4;;chr4:109090075..109090095,-!p2@LEF1!1.12!12.17!LEF1;;chr17:1959369..1959388,+!p2@HIC1!1.11!31.30!HIC1;;chr7:77428066..77428132,+!p2@PHTF2!1.07!69.26!PHTF2;;chr16:88752889..88752921,-!p1@SNAI3!1.07!12.46!SNAI3;;chr4:109088089..109088101,-!p11@LEF1!1.07!10.72!LEF1;;chr4:109088940..109089037,-!p4@LEF1!1.05!10.14!LEF1;;chr19:16435625..16435682,+!p1@KLF2!1.02!309.51!KLF2;;chr11:47236584..47236679,+!p1@DDB2!1.02!104.62!DDB2;;chr20:52226313..52226350,-!p3@ZNF217!1.02!9.56!ZNF217;;chr11:128563948..128564003,+!p1@FLI1!1.01!113.89!FLI1;;chr20:56195525..56195556,-!p2@ZBP1!1.01!9.27!ZBP1;;chrX:134477924..134477988,-!p1@ZNF75D!0.99!33.91!ZNF75D;;chr1:23857698..23857733,-!p1@E2F2!0.98!15.94!E2F2;;chr3:71179699..71179744,-!p2@FOXP1!0.95!61.73!FOXP1;;chr1:158979686..158979745,+!p1@IFI16!0.94!261.69!IFI16;;chr2:231084659..231084721,-!p1@SP110!0.94!186.34!SP110;;chr11:128392085..128392232,-!p1@ETS1!0.93!259.95!ETS1;;chr4:185395633..185395651,-!p2@IRF2!0.93!12.17!IRF2;;chr10:8095593..8095625,+!p3@GATA3!0.93!8.98!GATA3;;chrY:2803415..2803468,+!p1@ZFY!0.93!7.53!ZFY;;chr5:133451347..133451358,+!p3@TCF7!0.93!7.53!TCF7;;chr15:60884706..60884743,-!p1@RORA!0.92!39.70!RORA;;chr2:231090344..231090361,-!p3@SP110!0.92!7.25!SP110;;chr3:18487057..18487105,-!p4@SATB1!0.92!7.25!SATB1;;chr3:18466787..18466839,-!p1@SATB1!0.90!32.46!SATB1;;chr10:35484053..35484076,+!p1@CREM!0.90!17.97!CREM;;chr13:41593493..41593506,-!p8@ELF1!0.88!6.67!ELF1;;chr3:71542684..71542720,-!p18@FOXP1!0.88!6.67!FOXP1;;chr4:109086281..109086319,-!p9@LEF1!0.88!6.67!LEF1;;chr4:109089996..109090012,-!p5@LEF1!0.88!6.67!LEF1;;chr7:137620684..137620711,-!p4@CREB3L2!0.88!6.67!CREB3L2;;chrY:21906623..21906637,-!p3@KDM5D!0.88!6.67!KDM5D;;chr1:25291620..25291635,-!p4@RUNX3!0.88!6.67!RUNX3;;chr21:36421147..36421193,-!p10@RUNX1!0.88!6.67!RUNX1;;chr6:15249128..15249177,+!p4@JARID2!0.87!11.88!JARID2;;chr3:71542615..71542644,-!p12@FOXP1!0.87!6.38!FOXP1;;chr6:106546834..106546850,+!p4@PRDM1!0.85!6.09!PRDM1;;chr7:137620650..137620677,-!p3@CREB3L2!0.83!5.80!CREB3L2;;chr4:109088130..109088163,-!p13@LEF1!0.83!5.80!LEF1;;chr2:8822176..8822196,+!p1@ID2!0.82!858.40!ID2;;chr9:20621927..20621996,-!p3@MLLT3!0.82!9.85!MLLT3;;chr7:50344144..50344157,+!p6@IKZF1!0.81!5.51!IKZF1;;chr12:56415287..56415300,+!p5@IKZF4!0.81!5.51!IKZF4;;chr1:158978768..158978800,+!p8@IFI16!0.81!5.51!IFI16;;chr17:45810594..45810608,+!p1@TBX21!0.81!5.51!TBX21;;chr19:19779619..19779670,+!p1@ZNF101!0.79!15.65!ZNF101;;chr14:75988831..75988847,+!p2@BATF!0.79!5.22!BATF;;chr6:91006503..91006517,-!p3@BACH2!0.79!5.22!BACH2;;chr8:60031563..60031574,-!p7@TOX!0.79!5.22!TOX;;chr2:231191875..231191918,+!p1@SP140L!0.78!53.03!SP140L;;chr9:20622478..20622525,-!p1@MLLT3!0.78!43.47!MLLT3;;chr19:52674696..52674758,-!p1@ZNF836!0.78!15.94!ZNF836;;chr1:211432887..211432903,+!p4@RCOR3!0.78!12.17!RCOR3;;chr11:113930425..113930471,+!p1@ZBTB16!0.77!7.25!ZBTB16;;chr6:29648890..29648944,-!p1@ZFP57!0.77!4.93!ZFP57;;chr2:148778973..148779035,+!p3@MBD5!0.76!13.33!MBD5;;chr3:178789993..178790049,-!p5@ZMAT3!0.76!7.25!ZMAT3;;chr4:109089573..109089585,-!p8@LEF1!0.75!4.64!LEF1;;chr1:92949331..92949377,-!p2@GFI1!0.75!4.64!GFI1;;chr5:131826457..131826514,-!p1@IRF1!0.74!198.52!IRF1;;chr6:143266297..143266356,-!p1@HIVEP2!0.74!23.76!HIVEP2;;chr11:128392273..128392308,-!p2@ETS1!0.74!20.87!ETS1;;chr7:21467802..21467840,+!p3@SP4!0.74!9.85!SP4;;chr6:12009042..12009092,+!p6@HIVEP1!0.74!6.09!HIVEP1;;chr5:176738887..176738934,-!p1@MXD3!0.73!32.17!MXD3;;chr5:321810..321877,+!p1@AHRR!0.73!15.07!AHRR;;chr6:12008986..12009016,+!p3@HIVEP1!0.73!14.78!HIVEP1;;chr7:50343864..50343888,+!p7@IKZF1!0.73!4.35!IKZF1;;chr17:38020481..38020506,-!p7@IKZF3!0.73!4.35!IKZF3;;chr9:20620829..20620848,-!p7@MLLT3!0.73!4.35!MLLT3;;chr17:40440481..40440550,+!p1@STAT5A!0.72!34.49!STAT5A;;chr12:53614115..53614154,-!p1@RARG!0.72!25.21!RARG;;chr15:31619326..31619390,+!p2@KLF13!0.71!53.61!KLF13;;chr7:64838786..64838809,+!p2@ZNF92!0.71!26.37!ZNF92;;chr2:148778570..148778589,+!p4@MBD5!0.71!13.91!MBD5;;chr1:25256756..25256774,-!p1@RUNX3!0.71!8.40!RUNX3;;chr2:238600933..238600985,+!p3@LRRFIP1!0.70!24.34!LRRFIP1;;chr2:208394817..208394834,+!p3@CREB1!0.70!17.97!CREB1;;chr14:65569101..65569119,-!p3@MAX!0.70!14.20!MAX;;chr2:97202991..97203043,+!p3@ARID5A!0.70!4.06!ARID5A;;chr3:18480173..18480189,-!p6@SATB1!0.70!4.06!SATB1;;chr3:71542747..71542766,-!p34@FOXP1!0.70!4.06!FOXP1;;chr13:41240717..41240735,-!p2@FOXO1!0.69!30.14!FOXO1;;chr10:104154246..104154347,+!p3@NFKB2!0.69!26.95!NFKB2;;chr9:3525727..3525828,-!p2@RFX3!0.69!11.01!RFX3;;chr16:68118689..68118733,+!p3@NFATC3!0.69!10.72!NFATC3;;chr19:38085768..38085821,+!p1@ZNF540!0.69!6.09!ZNF540;;chr6:106546786..106546802,+!p6@PRDM1!0.68!3.77!PRDM1;;chr6:15401104..15401166,+!p5@JARID2!0.68!3.77!JARID2;;chr11:111249993..111250006,-!p1@POU2AF1!0.68!3.77!POU2AF1;;chr19:53039233..53039247,+!p2@ZNF808!0.67!5.80!ZNF808;;chr16:89787973..89788001,+!p3@ZNF276!0.66!7.53!ZNF276;;chr10:35484804..35484902,+!p2@CREM!0.65!15.07!CREM;;chr2:178128250..178128293,-!p6@NFE2L2!0.65!9.85!NFE2L2;;chr16:88752861..88752884,-!p2@SNAI3!0.65!3.48!SNAI3;;chr21:36421347..36421380,-!p8@RUNX1!0.65!3.48!RUNX1;;chr11:67007548..67007610,+!p3@KDM2A!0.64!28.98!KDM2A;;chr3:48282587..48282603,+!p1@ZNF589!0.64!17.39!ZNF589;;chr16:79634624..79634642,-!p1@MAF!0.64!15.36!MAF;;chr19:22235279..22235301,+!p1@ZNF257!0.64!6.96!ZNF257;;chr4:146859626..146859669,-!p2@ZNF827!0.64!5.22!ZNF827;;chr14:90085458..90085557,-!p1@FOXN3!0.63!40.28!FOXN3;;chr19:21512202..21512225,-!p1@ZNF708!0.63!19.42!ZNF708;;chr16:89787937..89787971,+!p1@ZNF276!0.63!9.56!ZNF276;;chr11:113930291..113930339,+!p2@ZBTB16!0.63!5.80!ZBTB16;;chr13:41240737..41240787,-!p1@FOXO1!0.62!45.21!FOXO1;;chr10:63809013..63809041,+!p3@ARID5B!0.62!20.58!ARID5B;;chr18:5295679..5295734,-!p2@ZFP161!0.62!7.82!ZFP161;;chr8:71316428..71316459,-!p2@NCOA2!0.62!5.80!NCOA2;;chrX:56258844..56258882,+!p1@KLF8!0.62!4.64!KLF8;;chr4:185395590..185395627,-!p3@IRF2!0.62!4.06!IRF2;;chrY:21906761..21906810,-!p2@KDM5D!0.62!3.19!KDM5D;;chrX:49121165..49121179,-!p1@FOXP3!0.62!3.19!FOXP3;;chr8:60031534..60031553,-!p8@TOX!0.62!3.19!TOX;;chr14:99738138..99738163,-!p1@BCL11B!0.62!3.19!BCL11B;;chr17:38020516..38020544,-!p5@IKZF3!0.62!3.19!IKZF3;;chr17:56565257..56565283,-!p2@HSF5!0.62!3.19!HSF5;;chr14:74226961..74227020,-!p1@C14orf43!0.61!24.05!C14orf43;;chr19:49140609..49140643,-!p1@DBP!0.61!20.58!DBP;;chr19:20959098..20959117,+!p1@ZNF66P!0.61!15.07!ZNF66P;;chr7:21467674..21467727,+!p1@SP4!0.61!14.20!SP4;;chr6:126102254..126102289,+!p5@NCOA7!0.61!9.85!NCOA7;;chr9:117150303..117150312,-!p3@AKNA!0.61!4.06!AKNA;;chr3:5021113..5021180,+!p1@BHLHE40!0.60!251.55!BHLHE40;;chr15:31619013..31619095,+!p1@KLF13!0.60!84.62!KLF13;;chr19:9546177..9546224,-!p1@ZNF266!0.60!25.79!ZNF266;;chr7:99156145..99156207,+!p5@ZNF655!0.60!11.88!ZNF655;;chr9:20622444..20622468,-!p2@MLLT3!0.60!11.30!MLLT3;;chr1:45805693..45805718,+!p3@TOE1!0.60!7.25!TOE1;;chr15:90544532..90544563,+!p1@ZNF710!0.60!6.67!ZNF710;;chr4:103422499..103422632,+!p1@NFKB1!0.59!74.77!NFKB1;;chr19:53073532..53073551,+!p1@ZNF701!0.59!15.36!ZNF701;;chr3:18466660..18466676,-!p5@SATB1!0.59!3.48!SATB1;;chr2:214015343..214015366,-!p3@IKZF2!0.59!2.90!IKZF2;;chr5:133450458..133450469,+!p4@TCF7!0.59!2.90!TCF7;;chr7:50343800..50343811,+!p8@IKZF1!0.59!2.90!IKZF1;;chr3:101568349..101568365,+!p1@NFKBIZ!0.58!179.97!NFKBIZ;;chr10:63661437..63661465,+!p2@ARID5B!0.58!66.08!ARID5B;;chr9:3525867..3525902,-!p3@RFX3!0.58!11.59!RFX3;;chr3:5020939..5020952,+!p2@BHLHE40!0.58!10.43!BHLHE40;;chr17:42297028..42297056,-!p3@UBTF!0.57!13.33!UBTF;;chr14:64970670..64970712,-!p3@ZBTB25!0.57!6.67!ZBTB25;;chr7:86781734..86781777,+!p1@DMTF1!0.56!60.28!DMTF1;;chr19:58326267..58326292,-!p1@ZNF552!0.56!11.30!ZNF552;;chr19:19976634..19976677,+!p2@ZNF253!0.56!11.30!ZNF253;;chr19:22817119..22817145,+!p1@ZNF492!0.56!4.93!ZNF492;;chr11:67007611..67007622,+!p6@KDM2A!0.56!3.77!KDM2A;;chr11:85375237..85375277,-!p4@CREBZF!0.56!3.19!CREBZF;;chr4:57522166..57522260,-!p2@HOPX!0.56!3.19!HOPX;;chr22:21771656..21771662,+!p1@HIC2!0.56!2.61!HIC2;;chr2:214013461..214013517,-!p6@IKZF2!0.56!2.61!IKZF2;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B2;;chr7:99097863..99097936,-!p1@ZNF394!0.36!20.29!ZNF394;;chr11:67007477..67007493,+!p2@KDM2A!0.36!17.10!KDM2A;;chr2:113033164..113033219,+!p1@ZC3H6!0.36!17.10!ZC3H6;;chr19:37064145..37064216,-!p1@ZNF529!0.36!17.10!ZNF529;;chrX:70503529..70503549,+!p2@NONO!0.36!10.43!NONO;;chr19:19843900..19843928,-!p1@ZNF14!0.36!9.85!ZNF14;;chr6:27440837..27440912,-!p1@ZNF184!0.36!8.98!ZNF184;;chr19:53466095..53466149,-!p1@ZNF321P,p1@ZNF816-ZNF321P,p1@ZNF816!0.36!8.11!ZNF816;;chr1:40997285..40997352,+!p1@ZNF684!0.36!6.67!ZNF684;;chr19:19496577..19496619,+!p5@GATAD2A!0.36!6.38!GATAD2A;;chr9:2017063..2017144,+!p4@SMARCA2!0.36!5.80!SMARCA2;;chr14:64971288..64971316,-!p2@ZBTB25!0.36!5.80!ZBTB25;;chr13:20357110..20357121,-!p2@PSPC1!0.36!4.93!PSPC1;;chr1:78444714..78444725,-!p3@FUBP1!0.36!4.93!FUBP1;;chr16:8962544..8962584,-!p2@CARHSP1!0.36!4.06!CARHSP1;;chr19:20150029..20150078,-!p3@ZNF682!0.36!2.90!ZNF682;;chr11:130184644..130184662,-!p5@ZBTB44!0.36!2.61!ZBTB44;;chr11:67007535..67007546,+!p7@KDM2A!0.36!2.32!KDM2A;;chr14:69262947..69262986,-!p3@ZFP36L1!0.36!1.74!ZFP36L1;;chr6:135502501..135502546,+!p1@MYB!0.36!1.74!MYB;;chr8:71316403..71316427,-!p6@NCOA2!0.36!1.74!NCOA2;;chr19:4067174..4067200,-!p9@ZBTB7A!0.36!1.74!ZBTB7A;;chr17:47866034..47866060,+!p1@KAT7!0.35!103.75!KAT7;;chr1:168195229..168195294,+!p1@SFT2D2,p1@TBX19!0.35!90.13!TBX19;;chr20:47894569..47894799,-!p1@ZNFX1!0.35!53.90!ZNFX1;;chr7:152133059..152133102,-!p1@MLL3!0.35!31.88!MLL3;;chr10:38299546..38299686,+!p1@ZNF33A!0.35!28.98!ZNF33A;;chr11:9482551..9482580,+!p1@ZNF143!0.35!25.79!ZNF143;;chr1:22778337..22778356,+!p1@ZBTB40!0.35!24.34!ZBTB40;;chr19:53193731..53193767,-!p1@ZNF83!0.35!17.68!ZNF83;;chr9:99540335..99540388,-!p1@ZNF510!0.35!14.49!ZNF510;;chrX:131623044..131623089,-!p1@MBNL3!0.35!7.82!MBNL3;;chr3:114866084..114866118,-!p2@ZBTB20!0.35!6.67!ZBTB20;;chr19:37096194..37096235,+!p1@ZNF382!0.35!5.80!ZNF382;;chr7:64254834..64254854,+!p2@ZNF138!0.35!2.90!ZNF138;;chr16:68119440..68119480,+!p4@NFATC3!0.35!2.61!NFATC3;;chr19:53466067..53466087,-!p3@ZNF321P,p3@ZNF816-ZNF321P,p3@ZNF816!0.35!2.32!ZNF816;;chr7:92076714..92076729,+!p2@GATAD1!0.35!1.74!GATAD1;;chr19:12721725..12721758,+!p1@ZNF791!0.34!34.20!ZNF791;;chr12:95467267..95467350,-!p1@NR2C1!0.34!23.18!NR2C1;;chr12:498415..498492,-!p1@KDM5A!0.34!21.45!KDM5A;;chr16:29819403..29819442,+!p5@MAZ!0.34!15.94!MAZ;;chr19:45004556..45004581,-!p1@ZNF180!0.34!11.30!ZNF180;;chr3:23986824..23986848,+!p2@NR1D2!0.34!10.43!NR1D2;;chr16:29817433..29817468,+!p8@MAZ!0.34!5.51!MAZ;;chr19:40502938..40502987,+!p1@ZNF546!0.34!4.35!ZNF546;;chr7:21467642..21467671,+!p2@SP4!0.34!3.77!SP4;;chr19:36980455..36980469,-!p2@ZNF566!0.34!3.48!ZNF566;;chr16:3285119..3285133,-!p2@ZNF200!0.34!3.19!ZNF200;;chr11:615570..615721,-!p2@IRF7!0.34!3.19!IRF7;;chr3:101546827..101546847,+!p2@NFKBIZ!0.34!2.03!NFKBIZ;;chr19:49140595..49140607,-!p3@DBP!0.34!2.03!DBP;;chr10:21962268..21962272,+!p6@MLLT10!0.34!1.74!MLLT10;;chr7:6746529..6746591,-!p1@ZNF12!0.33!26.08!ZNF12;;chr19:52531600..52531685,-!p1@ZNF614!0.33!17.39!ZNF614;;chr10:21823128..21823216,+!p1@MLLT10!0.33!17.10!MLLT10;;chr4:38665769..38665801,+!p2@KLF3!0.33!16.81!KLF3;;chr20:25677465..25677497,-!p1@ZNF337!0.33!11.30!ZNF337;;chr9:95640300..95640345,-!p1@ZNF484!0.33!10.14!ZNF484;;chr2:178128199..178128245,-!p3@NFE2L2!0.33!9.85!NFE2L2;;chr10:97889784..97889827,+!p1@ZNF518A!0.33!8.69!ZNF518A;;chr11:65687362..65687436,+!p3@DRAP1!0.33!8.11!DRAP1;;chr19:47615477..47615491,-!p3@ZC3H4!0.33!7.82!ZC3H4;;chr19:57752022..57752108,+!p1@ZNF805!0.33!7.82!ZNF805;;chr9:73028332..73028385,-!p3@KLF9!0.33!6.09!KLF9;;chr19:44598534..44598559,+!p2@ZNF224!0.33!5.22!ZNF224;;chr19:12721790..12721810,+!p2@ZNF791!0.33!4.64!ZNF791;;chrX:129244885..129244926,-!p3@ELF4!0.33!4.06!ELF4;;chr19:53970970..53971021,+!p1@ZNF813!0.33!3.77!ZNF813;;chr20:52210368..52210384,-!p1@ZNF217!0.33!2.90!ZNF217;;chr7:128577972..128578047,+!p1@IRF5!0.33!2.32!IRF5;;chr17:46621311..46621332,-!p8@HOXB2!0.33!1.74!HOXB2;;chr14:99737996..99738007,-!p5@BCL11B!0.33!1.16!BCL11B;;chr16:29819579..29819591,+!p32@MAZ!0.33!1.16!MAZ;;chr19:16435735..16435773,+!p4@KLF2!0.33!1.16!KLF2;;chr19:19729458..19729469,-!p2@PBX4!0.33!1.16!PBX4;;chr19:36204309..36204335,+!p1@ZBTB32!0.33!1.16!ZBTB32;;chr19:37096126..37096137,-!p4@ZNF529!0.33!1.16!ZNF529;;chr6:152011695..152011709,+!p6@ESR1!0.33!1.16!ESR1;;chr9:117138946..117138968,-!p4@AKNA!0.33!1.16!AKNA;;chr19:54058073..54058088,+!p1@ZNF331!0.33!1.16!ZNF331;;chr1:14057463..14057496,+!p4@PRDM2!0.33!1.16!PRDM2;;chr1:211432862..211432871,+!p10@RCOR3!0.33!1.16!RCOR3;;chr1:23857674..23857685,-!p3@E2F2!0.33!1.16!E2F2;;chr1:25291678..25291685,-!p8@RUNX3!0.33!1.16!RUNX3;;chr10:31607335..31607354,+!p5@ZEB1!0.33!1.16!ZEB1;;chr10:8097295..8097320,+!p6@GATA3!0.33!1.16!GATA3;;chr10:8097321..8097348,+!p4@GATA3!0.33!1.16!GATA3;;chr11:128392258..128392264,-!p7@ETS1!0.33!1.16!ETS1;;chr11:62369084..62369093,-!p9@MTA2!0.33!1.16!MTA2;;chr12:6782377..6782382,-!p15@ZNF384!0.33!1.16!ZNF384;;chr13:74708208..74708220,-!p12@KLF12!0.33!1.16!KLF12;;chr2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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000624;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 40:
|fonse_treatment=EFO:0000369,FF:0000409,FF:0011452,FF:11791-124B9
|fonse_treatment=EFO:0000369,FF:0000409,FF:0011452,FF:11791-124B9
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|fonse_treatment_closure=EFO:0000369,FF:0000409,FF:0011452,FF:11791-124B9
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|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%2520expanded%252c%2520donor1.CNhs13202.11791-124B9.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%2520expanded%252c%2520donor1.CNhs13202.11791-124B9.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%2520expanded%252c%2520donor1.CNhs13202.11791-124B9.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%2520expanded%252c%2520donor1.CNhs13202.11791-124B9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%2520expanded%252c%2520donor1.CNhs13202.11791-124B9.hg38.nobarcode.ctss.bed.gz
|id=FF:11791-124B9
|is_a=EFO:0002091;;FF:0000002;;FF:0000210
|is_obsolete=
|library_id=CNhs13202
|library_id_phase_based=2:CNhs13202
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11791
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11791
|name=CD4+CD25-CD45RA+ naive conventional T cells expanded, donor1
|namespace=
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs13202,LSID1004,release012,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
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|rna_box=124
|rna_catalog_number=
|rna_concentration=0.28764
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=11
|rna_od260/230=0.46
|rna_od260/280=2
|rna_position=B9
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=124B9
|rna_weight_ug=2.8764
|sample_age=25
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=T cell
|sample_collaboration=Michael Rehli (University of Regensberg)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.93890189800765e-240!GO:0043227;membrane-bound organelle;2.12798351435349e-208!GO:0043231;intracellular membrane-bound organelle;5.02074150016879e-208!GO:0043226;organelle;4.63295931871127e-197!GO:0043229;intracellular organelle;2.35220751681837e-196!GO:0005737;cytoplasm;1.02800220682059e-144!GO:0044422;organelle part;3.58563424161835e-137!GO:0044446;intracellular organelle part;1.5961373753984e-135!GO:0005634;nucleus;2.5731974152167e-111!GO:0032991;macromolecular complex;4.21779746838975e-106!GO:0044237;cellular metabolic process;1.18567275109374e-104!GO:0043170;macromolecule metabolic process;3.90186564173013e-101!GO:0044238;primary metabolic process;1.57122107017942e-100!GO:0044444;cytoplasmic part;5.47280767753914e-100!GO:0030529;ribonucleoprotein complex;3.16853050736968e-87!GO:0044428;nuclear part;9.13421946684774e-84!GO:0003723;RNA binding;2.04730288222199e-79!GO:0043233;organelle lumen;2.40684868517791e-70!GO:0031974;membrane-enclosed lumen;2.40684868517791e-70!GO:0043283;biopolymer metabolic process;8.62732315852878e-69!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.44824912137626e-59!GO:0005739;mitochondrion;1.38387309925487e-56!GO:0010467;gene expression;5.28316610567801e-56!GO:0005515;protein binding;5.62162466003449e-56!GO:0006396;RNA processing;9.63511295792666e-55!GO:0043234;protein complex;1.79430508711207e-54!GO:0006412;translation;3.31822835327957e-52!GO:0019538;protein metabolic process;8.76182732998923e-50!GO:0031981;nuclear lumen;3.17004404115978e-49!GO:0005840;ribosome;8.16612150171507e-49!GO:0033036;macromolecule localization;9.75543054035111e-48!GO:0044267;cellular protein metabolic process;6.16701036632314e-47!GO:0016071;mRNA metabolic process;1.1512196176498e-46!GO:0044260;cellular macromolecule metabolic process;3.78809028965547e-46!GO:0015031;protein transport;1.95879847022235e-45!GO:0006259;DNA metabolic process;9.3246066156063e-44!GO:0008104;protein localization;1.07689333334267e-43!GO:0045184;establishment of protein localization;2.97598446802238e-43!GO:0003735;structural constituent of ribosome;9.82501887116422e-43!GO:0003676;nucleic acid binding;2.34497150659192e-42!GO:0008380;RNA splicing;1.35849056492502e-40!GO:0006397;mRNA processing;1.73346371559149e-40!GO:0031090;organelle membrane;1.79857111604131e-40!GO:0044429;mitochondrial part;2.42974953445385e-40!GO:0009059;macromolecule biosynthetic process;1.24078092763207e-39!GO:0031967;organelle envelope;4.66858044990519e-39!GO:0031975;envelope;1.0255690293759e-38!GO:0033279;ribosomal subunit;3.70460163443268e-37!GO:0005829;cytosol;3.79106061756745e-36!GO:0016043;cellular component organization and biogenesis;1.7277074045133e-35!GO:0046907;intracellular transport;3.81950096966239e-34!GO:0009058;biosynthetic process;5.30499324885696e-33!GO:0044249;cellular biosynthetic process;5.76760068374186e-33!GO:0006886;intracellular protein transport;2.10094633473491e-32!GO:0005654;nucleoplasm;2.75163102145564e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.77430602270508e-32!GO:0065003;macromolecular complex assembly;4.22105831740911e-32!GO:0007049;cell cycle;2.04240507860205e-30!GO:0000166;nucleotide binding;3.97870685997604e-30!GO:0005681;spliceosome;4.0176878000247e-30!GO:0006996;organelle organization and biogenesis;1.60777892648157e-29!GO:0043228;non-membrane-bound organelle;5.68912565897313e-29!GO:0043232;intracellular non-membrane-bound organelle;5.68912565897313e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.32870608335317e-29!GO:0016070;RNA metabolic process;1.03215492029879e-28!GO:0022607;cellular component assembly;8.91767430901405e-28!GO:0006974;response to DNA damage stimulus;1.55016383512708e-26!GO:0044445;cytosolic part;1.93569455907642e-26!GO:0005740;mitochondrial envelope;1.45103863507232e-25!GO:0005694;chromosome;3.17077481535563e-25!GO:0022402;cell cycle process;8.78172260094215e-25!GO:0019866;organelle inner membrane;1.53508535888203e-24!GO:0051641;cellular localization;1.95427713824339e-24!GO:0031966;mitochondrial membrane;3.02155833767443e-24!GO:0051649;establishment of cellular localization;4.33773547833004e-24!GO:0044451;nucleoplasm part;4.3617921303231e-24!GO:0006512;ubiquitin cycle;1.30440517529331e-23!GO:0044427;chromosomal part;5.50325536760403e-23!GO:0032553;ribonucleotide binding;1.44521198137083e-22!GO:0032555;purine ribonucleotide binding;1.44521198137083e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.07315286498164e-22!GO:0006915;apoptosis;3.07315286498164e-22!GO:0012501;programmed cell death;3.19233372919057e-22!GO:0006281;DNA repair;3.20483791905798e-22!GO:0005743;mitochondrial inner membrane;3.37915226099075e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;3.44353357046979e-22!GO:0016462;pyrophosphatase activity;3.57844482456352e-22!GO:0017076;purine nucleotide binding;7.93033336819634e-22!GO:0017111;nucleoside-triphosphatase activity;1.28255272739442e-21!GO:0008219;cell death;2.26944993729392e-21!GO:0016265;death;2.26944993729392e-21!GO:0051276;chromosome organization and biogenesis;5.73612375198305e-21!GO:0005524;ATP binding;1.0517247291503e-20!GO:0006119;oxidative phosphorylation;1.41110029364697e-20!GO:0016874;ligase activity;1.57888651504861e-20!GO:0022618;protein-RNA complex assembly;1.60629982924269e-20!GO:0032559;adenyl ribonucleotide binding;4.08647044191062e-20!GO:0000278;mitotic cell cycle;9.95330023558665e-20!GO:0015935;small ribosomal subunit;3.28156911162623e-19!GO:0030554;adenyl nucleotide binding;3.80687734536302e-19!GO:0044265;cellular macromolecule catabolic process;6.29349056101913e-19!GO:0015934;large ribosomal subunit;7.57914898596842e-19!GO:0043412;biopolymer modification;1.15961359992617e-18!GO:0031980;mitochondrial lumen;4.1244581411346e-18!GO:0005759;mitochondrial matrix;4.1244581411346e-18!GO:0044455;mitochondrial membrane part;5.15465944438581e-18!GO:0005730;nucleolus;6.56481697276706e-18!GO:0016887;ATPase activity;1.09178766340641e-17!GO:0042623;ATPase activity, coupled;1.84872859797586e-17!GO:0016604;nuclear body;2.61284690708e-17!GO:0006325;establishment and/or maintenance of chromatin architecture;5.05494779081504e-17!GO:0008135;translation factor activity, nucleic acid binding;7.98757922389931e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;1.12700834698599e-16!GO:0043285;biopolymer catabolic process;1.35617303778464e-16!GO:0019941;modification-dependent protein catabolic process;1.37802806220974e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.37802806220974e-16!GO:0006323;DNA packaging;2.42893143578242e-16!GO:0006605;protein targeting;2.48805207147294e-16!GO:0006511;ubiquitin-dependent protein catabolic process;2.8037547053519e-16!GO:0042981;regulation of apoptosis;2.99586915680429e-16!GO:0006464;protein modification process;3.10656755582329e-16!GO:0044257;cellular protein catabolic process;3.11212482398276e-16!GO:0012505;endomembrane system;3.28090051926317e-16!GO:0051726;regulation of cell cycle;3.83816511084809e-16!GO:0009719;response to endogenous stimulus;4.3553074013751e-16!GO:0006913;nucleocytoplasmic transport;4.7079940648585e-16!GO:0043067;regulation of programmed cell death;5.17563417509658e-16!GO:0000087;M phase of mitotic cell cycle;5.63768142701947e-16!GO:0000074;regulation of progression through cell cycle;5.84565284006276e-16!GO:0022403;cell cycle phase;5.96602607041013e-16!GO:0051169;nuclear transport;9.52401743296441e-16!GO:0007067;mitosis;1.17666135005159e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.52634408496025e-15!GO:0008134;transcription factor binding;1.69738534366032e-15!GO:0009057;macromolecule catabolic process;2.63149951643774e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.47898260281217e-15!GO:0006457;protein folding;3.68499315431735e-15!GO:0043687;post-translational protein modification;5.2757746009968e-15!GO:0005746;mitochondrial respiratory chain;9.63630210609735e-15!GO:0000785;chromatin;1.86815383563646e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.88543944566488e-14!GO:0005635;nuclear envelope;2.16508003834018e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.67347417418917e-14!GO:0050794;regulation of cellular process;3.77684993812054e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;4.10489146762574e-14!GO:0000375;RNA splicing, via transesterification reactions;4.10489146762574e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.10489146762574e-14!GO:0006333;chromatin assembly or disassembly;4.75886021147704e-14!GO:0050136;NADH dehydrogenase (quinone) activity;7.5455046712374e-14!GO:0003954;NADH dehydrogenase activity;7.5455046712374e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.5455046712374e-14!GO:0016607;nuclear speck;1.16893109085552e-13!GO:0004386;helicase activity;1.21616811539753e-13!GO:0000279;M phase;1.80139929517627e-13!GO:0044248;cellular catabolic process;2.0648594637477e-13!GO:0031965;nuclear membrane;2.06978266672555e-13!GO:0051301;cell division;2.12744595502143e-13!GO:0006413;translational initiation;2.26143966341282e-13!GO:0003743;translation initiation factor activity;2.45269104704333e-13!GO:0048770;pigment granule;2.84709176111252e-13!GO:0042470;melanosome;2.84709176111252e-13!GO:0065004;protein-DNA complex assembly;6.81784576581472e-13!GO:0006260;DNA replication;7.00919358794938e-13!GO:0030163;protein catabolic process;1.30772659898007e-12!GO:0042254;ribosome biogenesis and assembly;1.36623365141383e-12!GO:0005761;mitochondrial ribosome;1.7130702085853e-12!GO:0000313;organellar ribosome;1.7130702085853e-12!GO:0044453;nuclear membrane part;3.85672381787051e-12!GO:0042775;organelle ATP synthesis coupled electron transport;4.311908417308e-12!GO:0042773;ATP synthesis coupled electron transport;4.311908417308e-12!GO:0008026;ATP-dependent helicase activity;6.10919549954408e-12!GO:0030964;NADH dehydrogenase complex (quinone);7.13413494820857e-12!GO:0045271;respiratory chain complex I;7.13413494820857e-12!GO:0005747;mitochondrial respiratory chain complex I;7.13413494820857e-12!GO:0006446;regulation of translational initiation;1.37590882429841e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.06657861258636e-11!GO:0048193;Golgi vesicle transport;5.27046997377562e-11!GO:0017038;protein import;9.85834362554741e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.95037917818687e-11!GO:0006334;nucleosome assembly;1.01081099563693e-10!GO:0008639;small protein conjugating enzyme activity;1.01226371857062e-10!GO:0051186;cofactor metabolic process;1.27769649143994e-10!GO:0019787;small conjugating protein ligase activity;1.29856376391417e-10!GO:0051082;unfolded protein binding;1.46317367928263e-10!GO:0004842;ubiquitin-protein ligase activity;1.92928338993927e-10!GO:0016568;chromatin modification;2.00792894762198e-10!GO:0043566;structure-specific DNA binding;2.20975484886104e-10!GO:0005643;nuclear pore;2.50472639465224e-10!GO:0050657;nucleic acid transport;2.82550180621674e-10!GO:0051236;establishment of RNA localization;2.82550180621674e-10!GO:0050658;RNA transport;2.82550180621674e-10!GO:0006403;RNA localization;2.93770470960323e-10!GO:0031497;chromatin assembly;3.17856058048711e-10!GO:0006793;phosphorus metabolic process;3.57223351740053e-10!GO:0006796;phosphate metabolic process;3.57223351740053e-10!GO:0009259;ribonucleotide metabolic process;4.18642024486288e-10!GO:0016787;hydrolase activity;7.30728511365565e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.07306397238237e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.24546981989388e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;9.4137177575522e-10!GO:0044432;endoplasmic reticulum part;1.28395796848688e-09!GO:0009260;ribonucleotide biosynthetic process;1.42218541807781e-09!GO:0006164;purine nucleotide biosynthetic process;1.42986120825042e-09!GO:0003697;single-stranded DNA binding;1.47584574625377e-09!GO:0006163;purine nucleotide metabolic process;1.72468318874182e-09!GO:0019829;cation-transporting ATPase activity;1.9828948003919e-09!GO:0019222;regulation of metabolic process;3.2383390197678e-09!GO:0008565;protein transporter activity;3.61607453169827e-09!GO:0003712;transcription cofactor activity;3.69035498883441e-09!GO:0005794;Golgi apparatus;4.37142578705138e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.59878201120556e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.13311337885613e-09!GO:0006399;tRNA metabolic process;5.31494139053853e-09!GO:0005783;endoplasmic reticulum;5.60139219906935e-09!GO:0009150;purine ribonucleotide metabolic process;5.75678985217493e-09!GO:0050789;regulation of biological process;6.03313950439992e-09!GO:0065002;intracellular protein transport across a membrane;6.16092905908508e-09!GO:0016310;phosphorylation;6.5872807548016e-09!GO:0016881;acid-amino acid ligase activity;7.21076314110031e-09!GO:0046930;pore complex;9.47303837766818e-09!GO:0006732;coenzyme metabolic process;1.11681984237693e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.31286954571486e-08!GO:0006916;anti-apoptosis;1.40465354783799e-08!GO:0051028;mRNA transport;1.46698248899938e-08!GO:0043069;negative regulation of programmed cell death;1.50608242186266e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.53009225883838e-08!GO:0045786;negative regulation of progression through cell cycle;1.88667621026173e-08!GO:0016072;rRNA metabolic process;2.13738995328033e-08!GO:0043066;negative regulation of apoptosis;2.13825238736947e-08!GO:0005789;endoplasmic reticulum membrane;2.53100476350975e-08!GO:0006364;rRNA processing;2.62184949097386e-08!GO:0051170;nuclear import;3.29198935926565e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.35282619643295e-08!GO:0030532;small nuclear ribonucleoprotein complex;3.50018749937757e-08!GO:0005839;proteasome core complex (sensu Eukaryota);4.02235482068355e-08!GO:0006917;induction of apoptosis;4.12803557011837e-08!GO:0016192;vesicle-mediated transport;5.08136950695936e-08!GO:0006606;protein import into nucleus;5.60576364629254e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.74546512545855e-08!GO:0007243;protein kinase cascade;6.03617676793264e-08!GO:0015986;ATP synthesis coupled proton transport;6.24339578348795e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.24339578348795e-08!GO:0012502;induction of programmed cell death;6.87444277177447e-08!GO:0048523;negative regulation of cellular process;6.99600087800409e-08!GO:0015078;hydrogen ion transmembrane transporter activity;9.28047778504991e-08!GO:0016740;transferase activity;1.12558669419148e-07!GO:0032446;protein modification by small protein conjugation;1.17789453344415e-07!GO:0051246;regulation of protein metabolic process;1.20100763974763e-07!GO:0016779;nucleotidyltransferase activity;1.31740222400398e-07!GO:0000786;nucleosome;1.47614017847403e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.52726520150579e-07!GO:0004298;threonine endopeptidase activity;1.71471574881004e-07!GO:0031323;regulation of cellular metabolic process;1.86054628576432e-07!GO:0043065;positive regulation of apoptosis;1.89093002329695e-07!GO:0009060;aerobic respiration;2.25719025159523e-07!GO:0019899;enzyme binding;2.54647562372923e-07!GO:0005768;endosome;2.5593575505257e-07!GO:0043068;positive regulation of programmed cell death;3.08153922891942e-07!GO:0009056;catabolic process;3.34844651218935e-07!GO:0065009;regulation of a molecular function;3.46086627428642e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.56804980195664e-07!GO:0004812;aminoacyl-tRNA ligase activity;3.56804980195664e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.56804980195664e-07!GO:0006888;ER to Golgi vesicle-mediated transport;4.08334726465581e-07!GO:0006754;ATP biosynthetic process;4.16095590683087e-07!GO:0006753;nucleoside phosphate metabolic process;4.16095590683087e-07!GO:0016567;protein ubiquitination;4.26516856243906e-07!GO:0009142;nucleoside triphosphate biosynthetic process;4.48502603654564e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.48502603654564e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.92125161568696e-07!GO:0005813;centrosome;4.92812372628157e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.05195760211607e-07!GO:0006310;DNA recombination;5.34291629983113e-07!GO:0009055;electron carrier activity;5.45874930470083e-07!GO:0009199;ribonucleoside triphosphate metabolic process;5.61507073187058e-07!GO:0009141;nucleoside triphosphate metabolic process;5.81969902248279e-07!GO:0000775;chromosome, pericentric region;5.94666903472939e-07!GO:0043038;amino acid activation;5.94666903472939e-07!GO:0006418;tRNA aminoacylation for protein translation;5.94666903472939e-07!GO:0043039;tRNA aminoacylation;5.94666903472939e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.98155562406447e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.98155562406447e-07!GO:0015630;microtubule cytoskeleton;7.33526734141998e-07!GO:0006261;DNA-dependent DNA replication;8.13060788275872e-07!GO:0046034;ATP metabolic process;8.23116574035676e-07!GO:0005815;microtubule organizing center;8.23116574035676e-07!GO:0005819;spindle;8.52476586865644e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.59977770349117e-07!GO:0009144;purine nucleoside triphosphate metabolic process;8.59977770349117e-07!GO:0048519;negative regulation of biological process;1.26503820210431e-06!GO:0000245;spliceosome assembly;1.37239786884615e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.44970253696371e-06!GO:0015399;primary active transmembrane transporter activity;1.44970253696371e-06!GO:0030120;vesicle coat;1.49268745678587e-06!GO:0030662;coated vesicle membrane;1.49268745678587e-06!GO:0006350;transcription;1.52677356226468e-06!GO:0003713;transcription coactivator activity;1.52677356226468e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.82256733201521e-06!GO:0051188;cofactor biosynthetic process;1.86790928295808e-06!GO:0045333;cellular respiration;2.02952671761073e-06!GO:0000075;cell cycle checkpoint;2.12697517494663e-06!GO:0048475;coated membrane;2.46137475341087e-06!GO:0030117;membrane coat;2.46137475341087e-06!GO:0051168;nuclear export;2.51768519981227e-06!GO:0006366;transcription from RNA polymerase II promoter;2.53983680289523e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.56798306358347e-06!GO:0045259;proton-transporting ATP synthase complex;2.69316687734043e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.48895443067437e-06!GO:0006461;protein complex assembly;4.25057482728561e-06!GO:0000151;ubiquitin ligase complex;4.3056437866885e-06!GO:0016563;transcription activator activity;5.14919880255907e-06!GO:0003724;RNA helicase activity;5.29012137228921e-06!GO:0006613;cotranslational protein targeting to membrane;5.48910028830821e-06!GO:0008632;apoptotic program;6.62788004307427e-06!GO:0006099;tricarboxylic acid cycle;6.99808050848113e-06!GO:0046356;acetyl-CoA catabolic process;6.99808050848113e-06!GO:0006752;group transfer coenzyme metabolic process;7.13669775386118e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.49240555328552e-06!GO:0016363;nuclear matrix;8.74575403016202e-06!GO:0048522;positive regulation of cellular process;8.93377629361237e-06!GO:0005793;ER-Golgi intermediate compartment;9.53550422125529e-06!GO:0003690;double-stranded DNA binding;1.02368470831483e-05!GO:0006401;RNA catabolic process;1.03393848328321e-05!GO:0010468;regulation of gene expression;1.29482547757301e-05!GO:0008270;zinc ion binding;1.43032727395587e-05!GO:0007242;intracellular signaling cascade;1.47096923892163e-05!GO:0006084;acetyl-CoA metabolic process;1.49257152010974e-05!GO:0005657;replication fork;1.73897436177583e-05!GO:0003677;DNA binding;2.16378397479271e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.18599192288803e-05!GO:0031324;negative regulation of cellular metabolic process;2.33505547660681e-05!GO:0065007;biological regulation;2.57741705192798e-05!GO:0004674;protein serine/threonine kinase activity;2.72437992849242e-05!GO:0051329;interphase of mitotic cell cycle;2.78396303203794e-05!GO:0009117;nucleotide metabolic process;2.95878528627023e-05!GO:0051325;interphase;3.21886832017597e-05!GO:0043492;ATPase activity, coupled to movement of substances;3.27359435373821e-05!GO:0007005;mitochondrion organization and biogenesis;3.42353506956033e-05!GO:0009108;coenzyme biosynthetic process;3.47188354823669e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;3.52811644274568e-05!GO:0007088;regulation of mitosis;3.62282425787431e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;4.12188581118446e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;4.9202840218954e-05!GO:0009109;coenzyme catabolic process;5.35820014956577e-05!GO:0006612;protein targeting to membrane;5.9451810528686e-05!GO:0006402;mRNA catabolic process;6.57414446819368e-05!GO:0008094;DNA-dependent ATPase activity;8.33763815118567e-05!GO:0008186;RNA-dependent ATPase activity;8.57851577528477e-05!GO:0005762;mitochondrial large ribosomal subunit;8.91424850866395e-05!GO:0000315;organellar large ribosomal subunit;8.91424850866395e-05!GO:0003899;DNA-directed RNA polymerase activity;9.65009387794188e-05!GO:0005773;vacuole;9.68664634264034e-05!GO:0043623;cellular protein complex assembly;0.000108630029129087!GO:0051427;hormone receptor binding;0.000113432710013059!GO:0006302;double-strand break repair;0.000113432710013059!GO:0008234;cysteine-type peptidase activity;0.000124897002909685!GO:0030384;phosphoinositide metabolic process;0.000126491855963652!GO:0051187;cofactor catabolic process;0.000134294000603472!GO:0044440;endosomal part;0.00013890423870958!GO:0010008;endosome membrane;0.00013890423870958!GO:0009892;negative regulation of metabolic process;0.000148735934533787!GO:0016564;transcription repressor activity;0.000174374555147792!GO:0005770;late endosome;0.000178786328006787!GO:0003684;damaged DNA binding;0.000181078923300502!GO:0050790;regulation of catalytic activity;0.000189683271420457!GO:0008654;phospholipid biosynthetic process;0.000189783170480555!GO:0005525;GTP binding;0.000194081220995765!GO:0032774;RNA biosynthetic process;0.000196445299556491!GO:0009615;response to virus;0.000209402904734921!GO:0005798;Golgi-associated vesicle;0.000209754361464811!GO:0003678;DNA helicase activity;0.00021202029467441!GO:0005885;Arp2/3 protein complex;0.000220081188404665!GO:0000776;kinetochore;0.00022120533282712!GO:0009967;positive regulation of signal transduction;0.00022204026043875!GO:0007093;mitotic cell cycle checkpoint;0.000222660290758456!GO:0043021;ribonucleoprotein binding;0.000225110111897596!GO:0035257;nuclear hormone receptor binding;0.000229154577865163!GO:0044431;Golgi apparatus part;0.000235951486996697!GO:0006818;hydrogen transport;0.00024295650300349!GO:0006351;transcription, DNA-dependent;0.000245503660409378!GO:0015992;proton transport;0.000248353236946857!GO:0000323;lytic vacuole;0.000254442384691379!GO:0005764;lysosome;0.000254442384691379!GO:0004004;ATP-dependent RNA helicase activity;0.000262642800053283!GO:0005667;transcription factor complex;0.00026687284394849!GO:0004518;nuclease activity;0.000304703933950979!GO:0007051;spindle organization and biogenesis;0.000307318360875358!GO:0006417;regulation of translation;0.00031872073134847!GO:0006891;intra-Golgi vesicle-mediated transport;0.000343750664359346!GO:0003729;mRNA binding;0.000351820482427884!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000359332829577404!GO:0003682;chromatin binding;0.000373702538800523!GO:0045449;regulation of transcription;0.000380216693010864!GO:0007050;cell cycle arrest;0.000402045458411711!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000403777992152372!GO:0006289;nucleotide-excision repair;0.000415318792889209!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00044584327397986!GO:0006650;glycerophospholipid metabolic process;0.000448944420339239!GO:0005769;early endosome;0.000486040988570249!GO:0006383;transcription from RNA polymerase III promoter;0.000488408570411079!GO:0046489;phosphoinositide biosynthetic process;0.000556375631633977!GO:0003924;GTPase activity;0.000564516695781136!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000582261529190415!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000640009473050012!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000699612069411558!GO:0051052;regulation of DNA metabolic process;0.000712770410408471!GO:0007059;chromosome segregation;0.000714966097562385!GO:0048518;positive regulation of biological process;0.000749656983751809!GO:0051252;regulation of RNA metabolic process;0.000766131623196884!GO:0019843;rRNA binding;0.000891174402073161!GO:0000314;organellar small ribosomal subunit;0.000905745030956585!GO:0005763;mitochondrial small ribosomal subunit;0.000905745030956585!GO:0031326;regulation of cellular biosynthetic process;0.00105540927907768!GO:0046914;transition metal ion binding;0.00109458632604673!GO:0004527;exonuclease activity;0.00119289627501585!GO:0032561;guanyl ribonucleotide binding;0.00119308008305659!GO:0019001;guanyl nucleotide binding;0.00119308008305659!GO:0016741;transferase activity, transferring one-carbon groups;0.00127497550372207!GO:0008168;methyltransferase activity;0.00127532037124658!GO:0046474;glycerophospholipid biosynthetic process;0.00133840144148306!GO:0006611;protein export from nucleus;0.00155523486034291!GO:0048500;signal recognition particle;0.00157417992421329!GO:0047485;protein N-terminus binding;0.00158863896318482!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00165748934226648!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00165748934226648!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00165748934226648!GO:0016853;isomerase activity;0.00170754507767964!GO:0000209;protein polyubiquitination;0.00176876967413201!GO:0060090;molecular adaptor activity;0.00178566128214793!GO:0007006;mitochondrial membrane organization and biogenesis;0.00182454209996162!GO:0000082;G1/S transition of mitotic cell cycle;0.0018638775306253!GO:0005637;nuclear inner membrane;0.00191927970484424!GO:0016481;negative regulation of transcription;0.00192399790049275!GO:0043681;protein import into mitochondrion;0.00196989834636204!GO:0006352;transcription initiation;0.00202087011506113!GO:0015631;tubulin binding;0.00206241552096433!GO:0009165;nucleotide biosynthetic process;0.00210942917920796!GO:0030658;transport vesicle membrane;0.00219234619947243!GO:0031072;heat shock protein binding;0.00219776344919592!GO:0003711;transcription elongation regulator activity;0.00228760233134502!GO:0000139;Golgi membrane;0.00239654288996861!GO:0006414;translational elongation;0.00241712299386241!GO:0008033;tRNA processing;0.00243217857462006!GO:0006405;RNA export from nucleus;0.00256429584332468!GO:0008312;7S RNA binding;0.00264626792310833!GO:0051092;activation of NF-kappaB transcription factor;0.00286365711749779!GO:0006607;NLS-bearing substrate import into nucleus;0.00289710877464631!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00291255459337352!GO:0045047;protein targeting to ER;0.00291255459337352!GO:0042802;identical protein binding;0.00301631565463759!GO:0008624;induction of apoptosis by extracellular signals;0.0030955974944023!GO:0046822;regulation of nucleocytoplasmic transport;0.00319725401599919!GO:0044452;nucleolar part;0.00348278839417821!GO:0005048;signal sequence binding;0.00357512912602393!GO:0048468;cell development;0.00363289831211446!GO:0005684;U2-dependent spliceosome;0.00366709680985742!GO:0032508;DNA duplex unwinding;0.00370034113964794!GO:0032392;DNA geometric change;0.00370034113964794!GO:0019867;outer membrane;0.00382898673603875!GO:0051087;chaperone binding;0.00384813233471908!GO:0042110;T cell activation;0.00384813233471908!GO:0008022;protein C-terminus binding;0.00384985790571357!GO:0022415;viral reproductive process;0.00397306485249853!GO:0016251;general RNA polymerase II transcription factor activity;0.00401649291216311!GO:0030118;clathrin coat;0.00406293442659103!GO:0051920;peroxiredoxin activity;0.00411243077027749!GO:0030660;Golgi-associated vesicle membrane;0.00421683360445182!GO:0022890;inorganic cation transmembrane transporter activity;0.0042397167411928!GO:0006355;regulation of transcription, DNA-dependent;0.00427875121666692!GO:0003714;transcription corepressor activity;0.00437052665193366!GO:0030521;androgen receptor signaling pathway;0.00439221559485953!GO:0007052;mitotic spindle organization and biogenesis;0.00439489609101121!GO:0032259;methylation;0.00439489609101121!GO:0031252;leading edge;0.0044253052377035!GO:0031968;organelle outer membrane;0.00442548102326292!GO:0030518;steroid hormone receptor signaling pathway;0.00443179772020193!GO:0031982;vesicle;0.00453789986964222!GO:0000287;magnesium ion binding;0.00456443705679052!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00458284509194792!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00464745042708106!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00464745042708106!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00468467895470582!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00478138253198632!GO:0001772;immunological synapse;0.00482222191704992!GO:0005741;mitochondrial outer membrane;0.0048361768413829!GO:0000228;nuclear chromosome;0.00494887572951269!GO:0051223;regulation of protein transport;0.00512128619957847!GO:0043596;nuclear replication fork;0.00546733296127687!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.00579128431003169!GO:0043488;regulation of mRNA stability;0.00591271643284654!GO:0043487;regulation of RNA stability;0.00591271643284654!GO:0019901;protein kinase binding;0.0059711892067955!GO:0009124;nucleoside monophosphate biosynthetic process;0.0062591243638624!GO:0009123;nucleoside monophosphate metabolic process;0.0062591243638624!GO:0000922;spindle pole;0.00639107768581253!GO:0031124;mRNA 3'-end processing;0.00639107768581253!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00641933608828165!GO:0004003;ATP-dependent DNA helicase activity;0.00656743198145181!GO:0051090;regulation of transcription factor activity;0.00658530990828106!GO:0006497;protein amino acid lipidation;0.00671726885822734!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0069855721254606!GO:0016859;cis-trans isomerase activity;0.00700470257358368!GO:0006284;base-excision repair;0.00703073788313748!GO:0045936;negative regulation of phosphate metabolic process;0.00704478959753451!GO:0009889;regulation of biosynthetic process;0.00704478959753451!GO:0005774;vacuolar membrane;0.0071293057815303!GO:0042101;T cell receptor complex;0.0071986958770458!GO:0007264;small GTPase mediated signal transduction;0.00728451497039188!GO:0046966;thyroid hormone receptor binding;0.00728716696173527!GO:0016605;PML body;0.00729121733768537!GO:0007265;Ras protein signal transduction;0.00748977359511792!GO:0006268;DNA unwinding during replication;0.00748977359511792!GO:0006506;GPI anchor biosynthetic process;0.00759351031567425!GO:0030663;COPI coated vesicle membrane;0.00760487794735669!GO:0030126;COPI vesicle coat;0.00760487794735669!GO:0006338;chromatin remodeling;0.00762367579682149!GO:0051789;response to protein stimulus;0.00766213950192823!GO:0006986;response to unfolded protein;0.00766213950192823!GO:0030137;COPI-coated vesicle;0.00791154591026403!GO:0019900;kinase binding;0.00795974607105689!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00805204057563553!GO:0000049;tRNA binding;0.00848561270175216!GO:0016272;prefoldin complex;0.00861198188550103!GO:0006505;GPI anchor metabolic process;0.00885913450552712!GO:0032200;telomere organization and biogenesis;0.00893478983148178!GO:0000723;telomere maintenance;0.00893478983148178!GO:0043414;biopolymer methylation;0.00893509760213531!GO:0048471;perinuclear region of cytoplasm;0.00893509760213531!GO:0003746;translation elongation factor activity;0.00920422114442301!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00923593341942691!GO:0004177;aminopeptidase activity;0.00931455058671077!GO:0051251;positive regulation of lymphocyte activation;0.00939039547906112!GO:0008139;nuclear localization sequence binding;0.00947164355418829!GO:0019783;small conjugating protein-specific protease activity;0.00948725980385605!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00949640672531398!GO:0019210;kinase inhibitor activity;0.00955582420839074!GO:0016788;hydrolase activity, acting on ester bonds;0.00961127202742082!GO:0006950;response to stress;0.0096560509341125!GO:0016584;nucleosome positioning;0.00970368367715113!GO:0016301;kinase activity;0.0100995502643312!GO:0045454;cell redox homeostasis;0.010175558512509!GO:0042770;DNA damage response, signal transduction;0.0102962140727594!GO:0031123;RNA 3'-end processing;0.0105121225331858!GO:0004532;exoribonuclease activity;0.0105661719499648!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0105661719499648!GO:0031902;late endosome membrane;0.0107294026191949!GO:0004843;ubiquitin-specific protease activity;0.0107480376006941!GO:0030522;intracellular receptor-mediated signaling pathway;0.0107495748195058!GO:0051336;regulation of hydrolase activity;0.0109571226709998!GO:0046467;membrane lipid biosynthetic process;0.0112056241004592!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0114009228008569!GO:0031625;ubiquitin protein ligase binding;0.0115895634356613!GO:0009161;ribonucleoside monophosphate metabolic process;0.0116418155647696!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0116418155647696!GO:0031410;cytoplasmic vesicle;0.0119934462284504!GO:0044438;microbody part;0.0121158390995406!GO:0044439;peroxisomal part;0.0121158390995406!GO:0016197;endosome transport;0.0122262738485136!GO:0030127;COPII vesicle coat;0.0126739690525897!GO:0012507;ER to Golgi transport vesicle membrane;0.0126739690525897!GO:0004860;protein kinase inhibitor activity;0.0127111530843672!GO:0048487;beta-tubulin binding;0.0127199046192947!GO:0005869;dynactin complex;0.0127669926542207!GO:0009112;nucleobase metabolic process;0.0128106076623717!GO:0031988;membrane-bound vesicle;0.0134297429545456!GO:0006091;generation of precursor metabolites and energy;0.0134835043228886!GO:0016790;thiolester hydrolase activity;0.0135594938856988!GO:0000339;RNA cap binding;0.0135835401005073!GO:0008408;3'-5' exonuclease activity;0.0137033089415108!GO:0009116;nucleoside metabolic process;0.0138007971115136!GO:0005765;lysosomal membrane;0.0138451334984597!GO:0044437;vacuolar part;0.0140321415167082!GO:0042393;histone binding;0.0140321415167082!GO:0006376;mRNA splice site selection;0.0145808670104054!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0145808670104054!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0146520416747211!GO:0005669;transcription factor TFIID complex;0.0146591532694857!GO:0005070;SH3/SH2 adaptor activity;0.0146677619178179!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0148524447329638!GO:0004221;ubiquitin thiolesterase activity;0.0148986750509435!GO:0042326;negative regulation of phosphorylation;0.0153660810019135!GO:0030695;GTPase regulator activity;0.0159674232850226!GO:0008637;apoptotic mitochondrial changes;0.0161341112045968!GO:0051235;maintenance of localization;0.0162793368545111!GO:0035258;steroid hormone receptor binding;0.0163880707241606!GO:0051539;4 iron, 4 sulfur cluster binding;0.0164115840307631!GO:0008017;microtubule binding;0.0164115840307631!GO:0043281;regulation of caspase activity;0.0166721253583121!GO:0005521;lamin binding;0.0168894817166663!GO:0031903;microbody membrane;0.0170070254999163!GO:0005778;peroxisomal membrane;0.0170070254999163!GO:0030134;ER to Golgi transport vesicle;0.0177023407041812!GO:0044454;nuclear chromosome part;0.0179390284804211!GO:0046649;lymphocyte activation;0.0181239783025658!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0182921157793811!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0185339572116353!GO:0015002;heme-copper terminal oxidase activity;0.0185339572116353!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0185339572116353!GO:0004129;cytochrome-c oxidase activity;0.0185339572116353!GO:0042158;lipoprotein biosynthetic process;0.0186462743289299!GO:0022406;membrane docking;0.0192472511587264!GO:0048278;vesicle docking;0.0192472511587264!GO:0015980;energy derivation by oxidation of organic compounds;0.0199507853189091!GO:0040029;regulation of gene expression, epigenetic;0.0201665466505458!GO:0043601;nuclear replisome;0.0204857495794595!GO:0030894;replisome;0.0204857495794595!GO:0032981;mitochondrial respiratory chain complex I assembly;0.020588180813065!GO:0010257;NADH dehydrogenase complex assembly;0.020588180813065!GO:0033108;mitochondrial respiratory chain complex assembly;0.020588180813065!GO:0006626;protein targeting to mitochondrion;0.0209329261627607!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0209762473870715!GO:0008047;enzyme activator activity;0.0210075837030536!GO:0006914;autophagy;0.0210075837030536!GO:0006919;caspase activation;0.0210075837030536!GO:0004197;cysteine-type endopeptidase activity;0.0210862560415442!GO:0016311;dephosphorylation;0.0212127356259191!GO:0043621;protein self-association;0.0212349562120015!GO:0030258;lipid modification;0.0212349562120015!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0212349562120015!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0212349562120015!GO:0051540;metal cluster binding;0.021454991995672!GO:0051536;iron-sulfur cluster binding;0.021454991995672!GO:0019079;viral genome replication;0.022026363759568!GO:0006144;purine base metabolic process;0.02220794094302!GO:0051059;NF-kappaB binding;0.0222655358123071!GO:0000738;DNA catabolic process, exonucleolytic;0.0226365438501801!GO:0006904;vesicle docking during exocytosis;0.0226432005897632!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0227842737518937!GO:0030880;RNA polymerase complex;0.0229823806017453!GO:0030119;AP-type membrane coat adaptor complex;0.0230340672157544!GO:0030125;clathrin vesicle coat;0.0232344002556321!GO:0030665;clathrin coated vesicle membrane;0.0232344002556321!GO:0006378;mRNA polyadenylation;0.0233357356428894!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0233357356428894!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0233357356428894!GO:0009126;purine nucleoside monophosphate metabolic process;0.0233357356428894!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0233357356428894!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0233618408818081!GO:0000059;protein import into nucleus, docking;0.0234089807236732!GO:0016408;C-acyltransferase activity;0.0234299668814592!GO:0045792;negative regulation of cell size;0.0235471443332937!GO:0000018;regulation of DNA recombination;0.0235471443332937!GO:0043022;ribosome binding;0.0237647086805977!GO:0000781;chromosome, telomeric region;0.0237647086805977!GO:0022411;cellular component disassembly;0.0240996177362571!GO:0051881;regulation of mitochondrial membrane potential;0.0241790738989893!GO:0008180;signalosome;0.0247080000938394!GO:0030131;clathrin adaptor complex;0.0250186898110802!GO:0030176;integral to endoplasmic reticulum membrane;0.0250186898110802!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0255498344168224!GO:0042608;T cell receptor binding;0.0266603271596176!GO:0016023;cytoplasmic membrane-bound vesicle;0.0266603271596176!GO:0050852;T cell receptor signaling pathway;0.026684727699563!GO:0007259;JAK-STAT cascade;0.026687314292509!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0268827482648702!GO:0030867;rough endoplasmic reticulum membrane;0.0269089435254294!GO:0046426;negative regulation of JAK-STAT cascade;0.026934464318674!GO:0000726;non-recombinational repair;0.0273281369650036!GO:0006007;glucose catabolic process;0.0274890395180543!GO:0044450;microtubule organizing center part;0.0274890395180543!GO:0000792;heterochromatin;0.0276813145968239!GO:0017134;fibroblast growth factor binding;0.0276813145968239!GO:0006839;mitochondrial transport;0.0276813145968239!GO:0005876;spindle microtubule;0.0279495037549391!GO:0008320;protein transmembrane transporter activity;0.0279842516788383!GO:0051098;regulation of binding;0.0280414628672997!GO:0008629;induction of apoptosis by intracellular signals;0.0280960542740226!GO:0004576;oligosaccharyl transferase activity;0.0281154504372063!GO:0004659;prenyltransferase activity;0.0284968272778836!GO:0046483;heterocycle metabolic process;0.029055097673075!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.029065202812914!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.029065202812914!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.029065202812914!GO:0030308;negative regulation of cell growth;0.0291251554984907!GO:0050870;positive regulation of T cell activation;0.0292786493907203!GO:0008097;5S rRNA binding;0.0297510291916713!GO:0003725;double-stranded RNA binding;0.0298106522885372!GO:0000178;exosome (RNase complex);0.0301118834538716!GO:0051338;regulation of transferase activity;0.0309902957953902!GO:0006595;polyamine metabolic process;0.0311101118733456!GO:0033116;ER-Golgi intermediate compartment membrane;0.0318906877130767!GO:0008250;oligosaccharyl transferase complex;0.0320745883761504!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0320781859563055!GO:0051452;cellular pH reduction;0.0322259107407992!GO:0051453;regulation of cellular pH;0.0322259107407992!GO:0045851;pH reduction;0.0322259107407992!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0324305828718705!GO:0050865;regulation of cell activation;0.0327452845832851!GO:0005832;chaperonin-containing T-complex;0.0329179754515831!GO:0051249;regulation of lymphocyte activation;0.0332700625416923!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0337828708286198!GO:0050681;androgen receptor binding;0.033839950614296!GO:0000096;sulfur amino acid metabolic process;0.0339124933561985!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0343143215179426!GO:0050811;GABA receptor binding;0.0343816897762393!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.034852500135804!GO:0005874;microtubule;0.035058800452645!GO:0006406;mRNA export from nucleus;0.0351880504705755!GO:0043549;regulation of kinase activity;0.0352891641118405!GO:0033673;negative regulation of kinase activity;0.0359658703228187!GO:0006469;negative regulation of protein kinase activity;0.0359658703228187!GO:0007034;vacuolar transport;0.0363585161486157!GO:0022884;macromolecule transmembrane transporter activity;0.0363585161486157!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0363585161486157!GO:0006984;ER-nuclear signaling pathway;0.0379865151599476!GO:0000152;nuclear ubiquitin ligase complex;0.0380201087131836!GO:0045045;secretory pathway;0.0380956504795514!GO:0002378;immunoglobulin biosynthetic process;0.0380956504795514!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0380956504795514!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0380956504795514!GO:0048524;positive regulation of viral reproduction;0.0381368461100053!GO:0005083;small GTPase regulator activity;0.0381701764387641!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0381767534129431!GO:0000428;DNA-directed RNA polymerase complex;0.0381767534129431!GO:0005784;translocon complex;0.0381767534129431!GO:0031570;DNA integrity checkpoint;0.0385440348680674!GO:0032940;secretion by cell;0.0385790776442224!GO:0030833;regulation of actin filament polymerization;0.0386969108954205!GO:0016407;acetyltransferase activity;0.039545625771571!GO:0031577;spindle checkpoint;0.03990419824501!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0399438645717498!GO:0006266;DNA ligation;0.0399651035831695!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0402894237892993!GO:0000819;sister chromatid segregation;0.040755594262099!GO:0030132;clathrin coat of coated pit;0.0407704028873064!GO:0007004;telomere maintenance via telomerase;0.0411632107545371!GO:0005095;GTPase inhibitor activity;0.0411632107545371!GO:0006518;peptide metabolic process;0.0423190874543689!GO:0030332;cyclin binding;0.0425171369106581!GO:0007021;tubulin folding;0.0425275238630434!GO:0006275;regulation of DNA replication;0.0426315080469052!GO:0009966;regulation of signal transduction;0.0430897003586997!GO:0019976;interleukin-2 binding;0.0432570491737287!GO:0004911;interleukin-2 receptor activity;0.0432570491737287!GO:0003887;DNA-directed DNA polymerase activity;0.0439425092780387!GO:0008276;protein methyltransferase activity;0.044417736265134!GO:0007030;Golgi organization and biogenesis;0.0452664998654208!GO:0001784;phosphotyrosine binding;0.0452664998654208!GO:0000725;recombinational repair;0.0457186058854299!GO:0000724;double-strand break repair via homologous recombination;0.0457186058854299!GO:0051348;negative regulation of transferase activity;0.0458128769650021!GO:0016791;phosphoric monoester hydrolase activity;0.0460660887957286!GO:0019058;viral infectious cycle;0.0466596503317782!GO:0004540;ribonuclease activity;0.0468052532503188!GO:0043280;positive regulation of caspase activity;0.0468052532503188!GO:0000070;mitotic sister chromatid segregation;0.0469665166098365!GO:0016126;sterol biosynthetic process;0.0479067446981733!GO:0000175;3'-5'-exoribonuclease activity;0.0481028716781875!GO:0000123;histone acetyltransferase complex;0.0482052220220845!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0482052220220845!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0482052220220845!GO:0045892;negative regulation of transcription, DNA-dependent;0.0482052220220845!GO:0008625;induction of apoptosis via death domain receptors;0.0498221280043852!GO:0051219;phosphoprotein binding;0.0499595997623018!GO:0016860;intramolecular oxidoreductase activity;0.0499595997623018!GO:0045185;maintenance of protein localization;0.0499595997623018
|sample_id=11791
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
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|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11791-124B9;search_select_hide=table117:FF:11791-124B9
}}
}}

Latest revision as of 18:20, 4 June 2020

Name:CD4+CD25-CD45RA+ naive conventional T cells expanded, donor1
Species:Human (Homo sapiens)
Library ID:CNhs13202
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age25
cell typeT cell
cell lineNA
companyNA
collaborationMichael Rehli (University of Regensberg)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number11
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005479
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13202 CAGE DRX008187 DRR009059
Accession ID Hg19

Library idBAMCTSS
CNhs13202 DRZ000484 DRZ001869
Accession ID Hg38

Library idBAMCTSS
CNhs13202 DRZ011834 DRZ013219
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.111
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.137
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.325
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0.0553
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.111
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.334
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.237
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.832
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.123
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0691
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.0826
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0859
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.111
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.728
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.497
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.513
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.555
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.199
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.629
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.438
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.111
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.215
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.111
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.199
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.976
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.89
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13202

Jaspar motifP-value
MA0002.22.13302e-9
MA0003.10.705
MA0004.10.822
MA0006.10.445
MA0007.10.678
MA0009.10.283
MA0014.10.939
MA0017.10.0534
MA0018.20.341
MA0019.10.729
MA0024.10.253
MA0025.10.192
MA0027.10.663
MA0028.13.63396e-4
MA0029.10.375
MA0030.10.593
MA0031.10.296
MA0035.20.044
MA0038.10.15
MA0039.20.54
MA0040.10.155
MA0041.10.135
MA0042.10.487
MA0043.10.0218
MA0046.10.194
MA0047.20.373
MA0048.10.706
MA0050.11.90419e-6
MA0051.10.0131
MA0052.10.0032
MA0055.10.936
MA0057.10.842
MA0058.10.935
MA0059.10.367
MA0060.10.847
MA0061.10.0141
MA0062.23.05954e-12
MA0065.20.0209
MA0066.10.116
MA0067.10.767
MA0068.10.11
MA0069.10.511
MA0070.10.647
MA0071.10.444
MA0072.10.839
MA0073.10.797
MA0074.10.726
MA0076.16.13786e-6
MA0077.10.0636
MA0078.10.578
MA0079.20.34
MA0080.21.04803e-13
MA0081.10.0235
MA0083.10.00923
MA0084.10.805
MA0087.10.236
MA0088.10.0457
MA0090.17.31704e-4
MA0091.10.649
MA0092.10.576
MA0093.10.767
MA0099.21.41911e-4
MA0100.10.135
MA0101.10.773
MA0102.20.367
MA0103.10.0666
MA0104.20.185
MA0105.11.61814e-6
MA0106.10.979
MA0107.10.953
MA0108.27.41042e-15
MA0111.10.088
MA0112.20.0383
MA0113.10.833
MA0114.10.159
MA0115.10.447
MA0116.11.73536e-5
MA0117.10.835
MA0119.10.722
MA0122.10.9
MA0124.10.63
MA0125.10.363
MA0131.10.462
MA0135.10.0966
MA0136.11.08459e-24
MA0137.20.193
MA0138.20.635
MA0139.10.0184
MA0140.10.0702
MA0141.10.597
MA0142.10.461
MA0143.10.204
MA0144.10.291
MA0145.10.748
MA0146.10.302
MA0147.10.151
MA0148.10.847
MA0149.10.0909
MA0150.10.122
MA0152.10.0154
MA0153.10.552
MA0154.10.00541
MA0155.10.793
MA0156.13.14632e-21
MA0157.10.066
MA0159.10.209
MA0160.10.305
MA0162.10.725
MA0163.11.27238e-14
MA0164.10.794
MA0258.10.0207
MA0259.10.444



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13202

Novel motifP-value
10.117
100.0102
1000.838
1010.141
1020.64
1030.131
1040.582
1050.114
1060.382
1070.552
1080.674
1090.0662
110.0401
1100.348
1110.259
1120.163
1130.532
1140.165
1150.0757
1160.982
1170.0112
1180.472
1190.494
120.648
1200.511
1210.859
1220.366
1230.00547
1240.0771
1250.886
1260.47
1270.344
1280.538
1290.115
130.458
1300.951
1310.517
1320.743
1330.244
1340.594
1350.613
1360.772
1370.0878
1380.201
1390.279
140.59
1400.0309
1410.547
1420.683
1438.27297e-4
1440.622
1450.222
1460.383
1470.091
1480.0356
1490.96
150.108
1500.646
1510.512
1520.319
1530.788
1540.778
1550.0196
1560.565
1570.196
1580.0732
1590.73
160.545
1600.249
1610.145
1620.126
1630.907
1640.147
1650.13
1660.659
1670.138
1680.223
1690.368
170.79
180.569
190.767
20.791
200.963
210.271
220.877
230.732
240.712
250.0673
260.149
270.0832
280.577
290.0178
30.0343
300.299
310.897
320.552
330.334
340.903
350.104
360.0174
370.212
380.597
390.274
40.607
400.32
410.402
420.0618
430.314
440.311
450.66
460.0483
470.0106
480.056
490.118
50.417
500.866
510.479
520.397
530.29
540.699
550.537
560.408
570.264
580.0827
590.264
60.795
600.38
610.14
620.0263
630.512
640.112
650.733
660.943
670.743
680.75
690.815
70.161
700.0559
710.0198
720.0963
730.69
740.689
750.0156
760.543
770.648
780.026
790.239
80.383
800.0261
810.436
820.0597
830.505
840.278
850.829
860.267
870.897
880.898
890.73
90.68
900.0148
910.398
920.289
930.267
940.0538
950.0621
960.0771
970.341
980.316
990.27



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13202


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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