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(Created page with "{{f5samples |id=FF:11792-124C1 |name=CD4+CD25-CD45RA- naive conventional T cells expanded, donor1 |sample_id=11792 |rna_tube_id=124C1 |rna_box=124 |rna_position=C1 |sam...")
 
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{{f5samples
{{f5samples
|id=FF:11792-124C1
|DRA_sample_Accession=CAGE@SAMD00004924
|name=CD4+CD25-CD45RA- naive conventional T cells expanded, donor1
|accession_numbers=CAGE;DRX008193;DRR009065;DRZ000490;DRZ001875;DRZ011840;DRZ013225
|sample_id=11792
|ancestors_in_anatomy_facet=
|rna_tube_id=124C1
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
|rna_box=124
|rna_position=C1
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=13.00000
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=25
|sample_ethnicity=
|rna_rin=
|rna_od260/230=1.89000
|rna_od260/280=2.01000
|sample_cell_type=T cell
|sample_cell_line=
|sample_collaboration=Michael Rehli (University of Regensberg)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=3.21900
|rna_concentration=0.32190
|sample_note=
|profile_hcage=CNhs13215,LSID1005,release012,MAPPING
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000624,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000805,CL:0000806,CL:0000807,CL:0000808,CL:0000809,CL:0000810,CL:0000827,CL:0000837,CL:0000838,CL:0000893,CL:0000894,CL:0000895,CL:0000898,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420,CL:0002425,CL:0002427,CL:0002428,CL:0002429,CL:0002431,CL:0002432,CL:0002433,CL:0002436,CL:0002489
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000065,UBERON:0000072,UBERON:0000077,UBERON:0000078,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000490,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000925,UBERON:0000926,UBERON:0000949,UBERON:0000974,UBERON:0001004,UBERON:0001007,UBERON:0001041,UBERON:0001042,UBERON:0001048,UBERON:0001062,UBERON:0001555,UBERON:0001557,UBERON:0002050,UBERON:0002193,UBERON:0002342,UBERON:0002346,UBERON:0002368,UBERON:0002370,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002530,UBERON:0002532,UBERON:0003075,UBERON:0003104,UBERON:0003295,UBERON:0003351,UBERON:0003408,UBERON:0003929,UBERON:0004119,UBERON:0004120,UBERON:0004121,UBERON:0004177,UBERON:0004185,UBERON:0004807,UBERON:0004921,UBERON:0005057,UBERON:0005058,UBERON:0005291,UBERON:0005423,UBERON:0005428,UBERON:0005434,UBERON:0005562,UBERON:0005911,UBERON:0006562,UBERON:0006598,UBERON:0007026,UBERON:0007284,UBERON:0007690,UBERON:0009113,UBERON:0009142,UBERON:0009145
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001
 
|comment=Previously: CD4-positiveCD25-CD45RA- naive conventional T cells expanded, donor1. TODO: full classification
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:231090433..231090469,+!p1@SP140!1.88!74.56!SP140;;chr7:50343634..50343717,+!p2@IKZF1!1.80!61.64!IKZF1;;chr2:192015701..192015743,-!p1@STAT4!1.68!63.11!STAT4;;chr2:192015750..192015793,-!p2@STAT4!1.61!52.46!STAT4;;chr4:57522598..57522664,-!p3@HOPX!1.59!37.62!HOPX;;chr4:57522674..57522699,-!p5@HOPX!1.57!36.49!HOPX;;chr2:231090471..231090504,+!p2@SP140!1.57!35.92!SP140;;chr20:50159198..50159299,-!p1@NFATC2!1.54!48.27!NFATC2;;chr7:50344251..50344288,+!p3@IKZF1!1.53!32.63!IKZF1;;chr9:117150254..117150271,-!p1@AKNA!1.50!81.47!AKNA;;chr10:8096631..8096660,+!p1@GATA3!1.50!36.49!GATA3;;chr10:8096772..8096787,+!p2@GATA3!1.50!35.69!GATA3;;chr14:75988771..75988826,+!p1@BATF!1.47!37.62!BATF;;chr3:18486354..18486377,-!p2@SATB1!1.47!35.24!SATB1;;chr7:50344289..50344323,+!p1@IKZF1!1.46!27.87!IKZF1;;chr7:50348268..50348366,+!p4@IKZF1!1.45!27.31!IKZF1;;chrY:21906594..21906622,-!p1@KDM5D!1.43!26.06!KDM5D;;chr4:109087445..109087463,-!p1@LEF1!1.40!24.25!LEF1;;chr6:391743..391759,+!p1@IRF4!1.39!23.46!IRF4;;chr7:50343895..50343936,+!p5@IKZF1!1.38!23.12!IKZF1;;chr16:68119324..68119364,+!p1@NFATC3!1.37!96.88!NFATC3;;chr3:63953435..63953499,+!p1@ATXN7!1.37!22.66!ATXN7;;chr3:18480217..18480239,-!p3@SATB1!1.36!21.87!SATB1;;chr4:57522166..57522260,-!p2@HOPX!1.35!24.59!HOPX;;chr1:23857698..23857733,-!p1@E2F2!1.31!35.35!E2F2;;chr17:45810594..45810608,+!p1@TBX21!1.28!18.13!TBX21;;chr17:37934365..37934387,-!p2@IKZF3!1.24!16.54!IKZF3;;chr19:16435625..16435682,+!p1@KLF2!1.22!488.59!KLF2;;chr1:25291475..25291511,-!p2@RUNX3!1.22!15.64!RUNX3;;chr13:41593425..41593480,-!p1@ELF1!1.20!93.93!ELF1;;chr19:19779619..19779670,+!p1@ZNF101!1.17!38.87!ZNF101;;chr1:25256756..25256774,-!p1@RUNX3!1.17!25.95!RUNX3;;chr20:56195474..56195506,-!p1@ZBP1!1.14!12.80!ZBP1;;chr11:128563948..128564003,+!p1@FLI1!1.13!149.57!FLI1;;chr16:79634624..79634642,-!p1@MAF!1.13!49.29!MAF;;chr16:79634595..79634620,-!p2@MAF!1.13!22.66!MAF;;chr4:57522513..57522548,-!p4@HOPX!1.13!12.58!HOPX;;chr16:88752889..88752921,-!p1@SNAI3!1.11!14.05!SNAI3;;chr7:77428066..77428132,+!p2@PHTF2!1.10!75.12!PHTF2;;chr19:19729477..19729542,-!p1@PBX4!1.10!24.93!PBX4;;chr1:92951607..92951661,-!p1@GFI1!1.09!11.44!GFI1;;chr17:38020392..38020477,-!p1@IKZF3!1.06!10.42!IKZF3;;chr15:60884706..60884743,-!p1@RORA!1.04!52.80!RORA;;chr6:15249128..15249177,+!p4@JARID2!1.03!17.68!JARID2;;chr7:137620650..137620677,-!p3@CREB3L2!1.03!9.74!CREB3L2;;chr11:47236584..47236679,+!p1@DDB2!1.00!99.37!DDB2;;chr12:56415246..56415286,+!p2@IKZF4!1.00!9.06!IKZF4;;chr2:231090344..231090361,-!p3@SP110!1.00!8.95!SP110;;chr6:45390269..45390298,+!p5@RUNX2!0.99!14.84!RUNX2;;chr6:106546808..106546833,+!p3@PRDM1!0.98!10.76!PRDM1;;chr14:75988831..75988847,+!p2@BATF!0.98!8.61!BATF;;chr3:27763807..27763822,-!p1@EOMES!0.98!8.50!EOMES;;chr1:158978768..158978800,+!p8@IFI16!0.97!8.27!IFI16;;chrY:2803415..2803468,+!p1@ZFY!0.97!8.27!ZFY;;chr21:36421535..36421610,-!p2@RUNX1!0.96!30.03!RUNX1;;chr17:38020516..38020544,-!p5@IKZF3!0.96!8.04!IKZF3;;chr11:128392085..128392232,-!p1@ETS1!0.94!265.60!ETS1;;chr10:35484053..35484076,+!p1@CREM!0.93!19.38!CREM;;chr17:37934204..37934241,-!p3@IKZF3!0.93!7.59!IKZF3;;chr6:45390300..45390335,+!p4@RUNX2!0.92!11.67!RUNX2;;chr20:52226313..52226350,-!p3@ZNF217!0.92!7.25!ZNF217;;chr7:64838786..64838809,+!p2@ZNF92!0.91!42.15!ZNF92;;chr1:158979686..158979745,+!p1@IFI16!0.90!236.48!IFI16;;chr16:88752861..88752884,-!p2@SNAI3!0.90!7.03!SNAI3;;chr8:60031619..60031676,-!p1@TOX!0.89!15.07!TOX;;chr21:36421147..36421193,-!p10@RUNX1!0.89!6.80!RUNX1;;chr2:70142232..70142251,+!p1@MXD1!0.88!38.87!MXD1;;chr2:238600933..238600985,+!p3@LRRFIP1!0.88!37.96!LRRFIP1;;chr7:21467802..21467840,+!p3@SP4!0.88!14.05!SP4;;chr3:18487057..18487105,-!p4@SATB1!0.88!6.57!SATB1;;chr3:71179699..71179744,-!p2@FOXP1!0.87!51.22!FOXP1;;chr10:8095593..8095625,+!p3@GATA3!0.87!7.59!GATA3;;chr7:137620684..137620711,-!p4@CREB3L2!0.87!6.35!CREB3L2;;chr20:56195525..56195556,-!p2@ZBP1!0.87!6.35!ZBP1;;chr21:36421347..36421380,-!p8@RUNX1!0.86!6.23!RUNX1;;chr4:57522701..57522712,-!p10@HOPX!0.85!6.01!HOPX;;chr4:185395633..185395651,-!p2@IRF2!0.83!9.52!IRF2;;chrX:49121165..49121179,-!p1@FOXP3!0.81!5.44!FOXP3;;chr16:68118689..68118733,+!p3@NFATC3!0.80!14.28!NFATC3;;chr17:1959369..1959388,+!p2@HIC1!0.79!14.62!HIC1;;chr4:109088940..109089037,-!p4@LEF1!0.79!5.10!LEF1;;chr6:106546731..106546755,+!p5@PRDM1!0.79!5.10!PRDM1;;chr7:50343864..50343888,+!p7@IKZF1!0.78!4.99!IKZF1;;chr17:38020557..38020572,-!p4@IKZF3!0.78!4.99!IKZF3;;chr2:231084659..231084721,-!p1@SP110!0.77!126.91!SP110;;chr11:128392273..128392308,-!p2@ETS1!0.77!22.55!ETS1;;chr13:41593493..41593506,-!p8@ELF1!0.77!4.87!ELF1;;chrY:21906623..21906637,-!p3@KDM5D!0.77!4.87!KDM5D;;chrX:56258844..56258882,+!p1@KLF8!0.76!6.80!KLF8;;chr4:109089901..109089930,-!p3@LEF1!0.75!4.65!LEF1;;chr5:133450365..133450444,+!p1@TCF7!0.74!22.89!TCF7;;chr5:321810..321877,+!p1@AHRR!0.74!15.64!AHRR;;chr13:74708246..74708264,-!p8@KLF12!0.74!5.10!KLF12;;chr5:176738887..176738934,-!p1@MXD3!0.73!32.18!MXD3;;chr16:6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Line 67: Line 40:
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|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA-%2520memory%2520conventional%2520T%2520cells%2520expanded%252c%2520donor1.CNhs13215.11792-124C1.hg38.nobarcode.ctss.bed.gz
|id=FF:11792-124C1
|is_a=EFO:0002091;;FF:0000002;;FF:0000210
|is_obsolete=
|library_id=CNhs13215
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11792
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11792
|name=CD4+CD25-CD45RA- memory conventional T cells expanded, donor1
|namespace=
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|profile_hcage=CNhs13215,LSID1005,release012,COMPLETED
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|rna_box=124
|rna_catalog_number=
|rna_concentration=0.3219
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=13
|rna_od260/230=1.89
|rna_od260/280=2.01
|rna_position=C1
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=124C1
|rna_weight_ug=3.219
|sample_age=25
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=T cell
|sample_collaboration=Michael Rehli (University of Regensberg)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.02775274822625e-245!GO:0043227;membrane-bound organelle;1.8502937860217e-212!GO:0043231;intracellular membrane-bound organelle;5.48544702931722e-212!GO:0043226;organelle;1.33472744921946e-201!GO:0043229;intracellular organelle;8.01711380778146e-201!GO:0005737;cytoplasm;2.96123272406666e-152!GO:0044422;organelle part;2.87636267964446e-141!GO:0044446;intracellular organelle part;1.82336894040187e-139!GO:0005634;nucleus;3.43599803127041e-111!GO:0032991;macromolecular complex;7.32590792164206e-109!GO:0044444;cytoplasmic part;9.56504279842041e-105!GO:0044237;cellular metabolic process;2.84356671083952e-103!GO:0043170;macromolecule metabolic process;1.45886467666815e-102!GO:0044238;primary metabolic process;1.26918145708046e-100!GO:0030529;ribonucleoprotein complex;2.24104492303335e-87!GO:0044428;nuclear part;3.78077092006459e-85!GO:0003723;RNA binding;4.23515908422726e-79!GO:0043233;organelle lumen;7.0412263249297e-70!GO:0031974;membrane-enclosed lumen;7.0412263249297e-70!GO:0043283;biopolymer metabolic process;6.84841371403531e-69!GO:0005515;protein binding;2.8963744797257e-59!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.69135028683305e-58!GO:0043234;protein complex;1.02731014673226e-56!GO:0005739;mitochondrion;1.49157391595285e-56!GO:0010467;gene expression;2.23023755494338e-53!GO:0006396;RNA processing;2.23023755494338e-53!GO:0006412;translation;1.448501578015e-52!GO:0019538;protein metabolic process;4.33415415892572e-52!GO:0033036;macromolecule localization;1.62658510179483e-49!GO:0044267;cellular protein metabolic process;4.77143222597142e-49!GO:0031981;nuclear lumen;7.47225586485304e-49!GO:0005840;ribosome;8.90480077484786e-49!GO:0044260;cellular macromolecule metabolic process;3.6221175862357e-48!GO:0015031;protein transport;1.12631013758044e-47!GO:0006259;DNA metabolic process;1.26111788759412e-47!GO:0016071;mRNA metabolic process;9.19971666507038e-47!GO:0045184;establishment of protein localization;1.36057972496606e-45!GO:0008104;protein localization;1.36057972496606e-45!GO:0003735;structural constituent of ribosome;5.48071578907797e-43!GO:0031090;organelle membrane;1.16026201909021e-41!GO:0031967;organelle envelope;5.39951703801967e-41!GO:0031975;envelope;1.28477383604996e-40!GO:0006397;mRNA processing;1.6423570814135e-40!GO:0044429;mitochondrial part;1.65212565098391e-40!GO:0009059;macromolecule biosynthetic process;2.37829465480893e-40!GO:0008380;RNA splicing;3.75309101886257e-40!GO:0003676;nucleic acid binding;6.23016530932497e-40!GO:0033279;ribosomal subunit;5.20078647657309e-38!GO:0016043;cellular component organization and biogenesis;3.97927377468351e-37!GO:0046907;intracellular transport;4.31904368044627e-36!GO:0005829;cytosol;1.47801774076451e-35!GO:0007049;cell cycle;6.25857960966654e-34!GO:0065003;macromolecular complex assembly;8.04478865271527e-34!GO:0006886;intracellular protein transport;3.11677193333555e-33!GO:0009058;biosynthetic process;5.78175615592091e-33!GO:0044249;cellular biosynthetic process;9.32751462826587e-33!GO:0005654;nucleoplasm;2.90771973059873e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.42189155639455e-32!GO:0006996;organelle organization and biogenesis;7.58790044887276e-32!GO:0043228;non-membrane-bound organelle;8.85517306151066e-32!GO:0043232;intracellular non-membrane-bound organelle;8.85517306151066e-32!GO:0000166;nucleotide binding;2.59872319701156e-31!GO:0005681;spliceosome;4.52239998222429e-30!GO:0022607;cellular component assembly;1.31464895086381e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.34107610823338e-29!GO:0005694;chromosome;1.94409794991823e-28!GO:0006974;response to DNA damage stimulus;3.55477456916009e-28!GO:0016070;RNA metabolic process;7.50796182975952e-27!GO:0022402;cell cycle process;8.44164887719853e-27!GO:0051641;cellular localization;1.2642726697435e-26!GO:0044427;chromosomal part;1.43124621283014e-26!GO:0051649;establishment of cellular localization;1.65827480015169e-26!GO:0005740;mitochondrial envelope;3.12296304912455e-26!GO:0044445;cytosolic part;6.3898274424165e-26!GO:0019866;organelle inner membrane;2.33649287998558e-25!GO:0031966;mitochondrial membrane;5.09949026127426e-25!GO:0051276;chromosome organization and biogenesis;6.20504330380448e-24!GO:0006281;DNA repair;7.72489043808491e-24!GO:0032553;ribonucleotide binding;8.21040392246936e-24!GO:0032555;purine ribonucleotide binding;8.21040392246936e-24!GO:0006512;ubiquitin cycle;8.6111818058495e-24!GO:0044451;nucleoplasm part;9.77062570489515e-24!GO:0000278;mitotic cell cycle;3.7450055971109e-23!GO:0017076;purine nucleotide binding;4.91739240597913e-23!GO:0005743;mitochondrial inner membrane;1.12217238458528e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.62223828667744e-22!GO:0016462;pyrophosphatase activity;4.32986022382644e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;4.63460841334639e-22!GO:0006915;apoptosis;5.74337297896093e-22!GO:0012501;programmed cell death;6.18359255534599e-22!GO:0017111;nucleoside-triphosphatase activity;6.99952109181557e-22!GO:0022618;protein-RNA complex assembly;2.2699934825587e-21!GO:0005524;ATP binding;2.92754860672818e-21!GO:0008219;cell death;4.58359111351326e-21!GO:0016265;death;4.58359111351326e-21!GO:0006119;oxidative phosphorylation;8.44492047432709e-21!GO:0032559;adenyl ribonucleotide binding;1.7525810608285e-20!GO:0044265;cellular macromolecule catabolic process;2.58017577430045e-20!GO:0016874;ligase activity;6.38374687805261e-20!GO:0015935;small ribosomal subunit;8.55382929546086e-20!GO:0043412;biopolymer modification;1.11775429690777e-19!GO:0030554;adenyl nucleotide binding;1.65030190396703e-19!GO:0022403;cell cycle phase;1.90044305245524e-19!GO:0000087;M phase of mitotic cell cycle;3.18499796748699e-19!GO:0015934;large ribosomal subunit;3.37624793684313e-19!GO:0007067;mitosis;6.69365351871823e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;6.91806199752113e-19!GO:0044455;mitochondrial membrane part;1.31454851913527e-18!GO:0006323;DNA packaging;3.83155548311364e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;5.25855239202548e-18!GO:0019941;modification-dependent protein catabolic process;6.09853427026509e-18!GO:0043632;modification-dependent macromolecule catabolic process;6.09853427026509e-18!GO:0009719;response to endogenous stimulus;1.02871640348623e-17!GO:0006511;ubiquitin-dependent protein catabolic process;1.27343198509489e-17!GO:0051301;cell division;1.54295441108565e-17!GO:0044257;cellular protein catabolic process;1.60752141163178e-17!GO:0031980;mitochondrial lumen;1.77997686799586e-17!GO:0005759;mitochondrial matrix;1.77997686799586e-17!GO:0006464;protein modification process;1.92776131467472e-17!GO:0005730;nucleolus;2.79218812659544e-17!GO:0012505;endomembrane system;3.35924185272879e-17!GO:0008135;translation factor activity, nucleic acid binding;5.39875687453792e-17!GO:0043285;biopolymer catabolic process;8.88326560560233e-17!GO:0000279;M phase;1.0210901238333e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.84698601818237e-16!GO:0016604;nuclear body;1.96323588096897e-16!GO:0016887;ATPase activity;1.98956167262206e-16!GO:0042623;ATPase activity, coupled;2.13389851438014e-16!GO:0006605;protein targeting;2.32345927052893e-16!GO:0009057;macromolecule catabolic process;4.63183167002405e-16!GO:0000785;chromatin;5.22774771894678e-16!GO:0005635;nuclear envelope;7.79752920052911e-16!GO:0006457;protein folding;9.62587805339858e-16!GO:0006913;nucleocytoplasmic transport;1.09734996897739e-15!GO:0043687;post-translational protein modification;1.22135548140094e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.22513396044127e-15!GO:0051169;nuclear transport;2.37209621486153e-15!GO:0005746;mitochondrial respiratory chain;2.47170391796518e-15!GO:0051726;regulation of cell cycle;2.59503067556428e-15!GO:0048770;pigment granule;2.64656107916338e-15!GO:0042470;melanosome;2.64656107916338e-15!GO:0006333;chromatin assembly or disassembly;2.87161923863031e-15!GO:0042981;regulation of apoptosis;2.87161923863031e-15!GO:0000074;regulation of progression through cell cycle;4.27067180558663e-15!GO:0043067;regulation of programmed cell death;5.20622390776577e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.64823362864841e-15!GO:0008134;transcription factor binding;1.09804922486034e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.53346475299057e-14!GO:0031965;nuclear membrane;1.78259712943722e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;2.05593337367974e-14!GO:0000375;RNA splicing, via transesterification reactions;2.05593337367974e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.05593337367974e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.44900773791257e-14!GO:0003954;NADH dehydrogenase activity;2.44900773791257e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.44900773791257e-14!GO:0006260;DNA replication;4.27662368088884e-14!GO:0044248;cellular catabolic process;5.85646550176066e-14!GO:0003743;translation initiation factor activity;6.71188233411907e-14!GO:0065004;protein-DNA complex assembly;7.19982022680555e-14!GO:0006413;translational initiation;7.67820652024366e-14!GO:0030163;protein catabolic process;2.19312962802631e-13!GO:0004386;helicase activity;2.69921334556858e-13!GO:0050794;regulation of cellular process;7.07223278427455e-13!GO:0016607;nuclear speck;7.54004297239883e-13!GO:0005761;mitochondrial ribosome;7.5500362848285e-13!GO:0000313;organellar ribosome;7.5500362848285e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.15018656028109e-12!GO:0042773;ATP synthesis coupled electron transport;1.15018656028109e-12!GO:0044453;nuclear membrane part;1.32244496197033e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.238470052693e-12!GO:0045271;respiratory chain complex I;2.238470052693e-12!GO:0005747;mitochondrial respiratory chain complex I;2.238470052693e-12!GO:0006334;nucleosome assembly;6.59857882084165e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.97587079413912e-12!GO:0042254;ribosome biogenesis and assembly;1.03551852181457e-11!GO:0048193;Golgi vesicle transport;1.22307279223667e-11!GO:0006446;regulation of translational initiation;1.60548579970977e-11!GO:0031497;chromatin assembly;1.85264020102457e-11!GO:0008026;ATP-dependent helicase activity;3.22768387827912e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.11337715760098e-11!GO:0008639;small protein conjugating enzyme activity;4.16140446697428e-11!GO:0016568;chromatin modification;4.74649863572367e-11!GO:0051082;unfolded protein binding;5.58973903886071e-11!GO:0019787;small conjugating protein ligase activity;7.66327247438374e-11!GO:0004842;ubiquitin-protein ligase activity;9.13386720707749e-11!GO:0017038;protein import;1.03039469228147e-10!GO:0044432;endoplasmic reticulum part;1.21693086819893e-10!GO:0051186;cofactor metabolic process;1.30996439796303e-10!GO:0005794;Golgi apparatus;1.47763120757701e-10!GO:0006793;phosphorus metabolic process;1.51675415935909e-10!GO:0006796;phosphate metabolic process;1.51675415935909e-10!GO:0043566;structure-specific DNA binding;1.82942737221526e-10!GO:0005643;nuclear pore;1.85985259104333e-10!GO:0050657;nucleic acid transport;2.34471289109923e-10!GO:0051236;establishment of RNA localization;2.34471289109923e-10!GO:0050658;RNA transport;2.34471289109923e-10!GO:0006403;RNA localization;2.86272365278963e-10!GO:0016787;hydrolase activity;2.90621728201958e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.02438728121746e-10!GO:0005783;endoplasmic reticulum;6.55873856811864e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.7517778788106e-10!GO:0003697;single-stranded DNA binding;9.47369112880475e-10!GO:0009259;ribonucleotide metabolic process;1.20672591557917e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.51980184869509e-09!GO:0008565;protein transporter activity;1.70516880183993e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.0403539816981e-09!GO:0019829;cation-transporting ATPase activity;2.70235898831935e-09!GO:0065002;intracellular protein transport across a membrane;3.50586333041309e-09!GO:0009260;ribonucleotide biosynthetic process;4.32822364023347e-09!GO:0016881;acid-amino acid ligase activity;4.34617099491287e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.65255537217859e-09!GO:0006164;purine nucleotide biosynthetic process;4.76493749197457e-09!GO:0006163;purine nucleotide metabolic process;5.38221468805439e-09!GO:0016310;phosphorylation;6.12171293567819e-09!GO:0005789;endoplasmic reticulum membrane;6.20663999516889e-09!GO:0046930;pore complex;6.47922926645311e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.57281199768654e-09!GO:0019222;regulation of metabolic process;9.6325587112616e-09!GO:0000775;chromosome, pericentric region;9.81131613836763e-09!GO:0051246;regulation of protein metabolic process;1.21605054610464e-08!GO:0003712;transcription cofactor activity;1.24239169555656e-08!GO:0006732;coenzyme metabolic process;1.28630658697084e-08!GO:0051028;mRNA transport;1.38089510626808e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.41298349930829e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.58488120584369e-08!GO:0009150;purine ribonucleotide metabolic process;1.66157913249307e-08!GO:0005819;spindle;1.73294407054603e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.24963587821638e-08!GO:0016192;vesicle-mediated transport;2.3363619409674e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.53368299165475e-08!GO:0000786;nucleosome;2.56171000994087e-08!GO:0007243;protein kinase cascade;2.83281891887709e-08!GO:0006399;tRNA metabolic process;3.12970568460473e-08!GO:0050789;regulation of biological process;3.21362190756835e-08!GO:0051170;nuclear import;3.93064364968286e-08!GO:0006916;anti-apoptosis;5.27489181273262e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.51143822049964e-08!GO:0016779;nucleotidyltransferase activity;5.74099477888508e-08!GO:0005813;centrosome;6.08744323936256e-08!GO:0004298;threonine endopeptidase activity;6.59784177650983e-08!GO:0016740;transferase activity;6.87824393846665e-08!GO:0006606;protein import into nucleus;6.88130764465599e-08!GO:0032446;protein modification by small protein conjugation;6.96747391620563e-08!GO:0015630;microtubule cytoskeleton;7.0574474866129e-08!GO:0016072;rRNA metabolic process;8.2682679731848e-08!GO:0006310;DNA recombination;8.90191783672378e-08!GO:0006364;rRNA processing;9.33411100480245e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.03839649571635e-07!GO:0043069;negative regulation of programmed cell death;1.04984286503889e-07!GO:0005815;microtubule organizing center;1.05999487248793e-07!GO:0006917;induction of apoptosis;1.13597161820782e-07!GO:0005768;endosome;1.16065469013937e-07!GO:0015986;ATP synthesis coupled proton transport;1.20003463911135e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.20003463911135e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.46419574365722e-07!GO:0043066;negative regulation of apoptosis;1.46769064732301e-07!GO:0016567;protein ubiquitination;1.83642888877135e-07!GO:0012502;induction of programmed cell death;1.92211525459513e-07!GO:0006888;ER to Golgi vesicle-mediated transport;2.04895487204541e-07!GO:0009056;catabolic process;2.36910201386845e-07!GO:0006261;DNA-dependent DNA replication;2.49326511864501e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.71247460965626e-07!GO:0043065;positive regulation of apoptosis;2.75831936251613e-07!GO:0009055;electron carrier activity;2.75831936251613e-07!GO:0065009;regulation of a molecular function;2.89176839569285e-07!GO:0019899;enzyme binding;3.36489089928208e-07!GO:0048523;negative regulation of cellular process;3.53560066978903e-07!GO:0009060;aerobic respiration;3.9207600043327e-07!GO:0043068;positive regulation of programmed cell death;4.42248982516021e-07!GO:0000245;spliceosome assembly;4.71306154144891e-07!GO:0000075;cell cycle checkpoint;5.23818737411819e-07!GO:0031323;regulation of cellular metabolic process;5.6214657399987e-07!GO:0045786;negative regulation of progression through cell cycle;6.21173660674252e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.43974032910836e-07!GO:0004812;aminoacyl-tRNA ligase activity;7.43974032910836e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.43974032910836e-07!GO:0030120;vesicle coat;8.00371779973945e-07!GO:0030662;coated vesicle membrane;8.00371779973945e-07!GO:0009142;nucleoside triphosphate biosynthetic process;8.35214356273924e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.35214356273924e-07!GO:0006754;ATP biosynthetic process;9.0929143253069e-07!GO:0006753;nucleoside phosphate metabolic process;9.0929143253069e-07!GO:0051188;cofactor biosynthetic process;1.07190433921589e-06!GO:0043038;amino acid activation;1.10512058939637e-06!GO:0006418;tRNA aminoacylation for protein translation;1.10512058939637e-06!GO:0043039;tRNA aminoacylation;1.10512058939637e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.138809096782e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.33617134214055e-06!GO:0009141;nucleoside triphosphate metabolic process;1.37737184865509e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.44579257940193e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.44579257940193e-06!GO:0048475;coated membrane;1.46340092789802e-06!GO:0030117;membrane coat;1.46340092789802e-06!GO:0051168;nuclear export;1.60964950118523e-06!GO:0006461;protein complex assembly;2.15403036050116e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.27098125175833e-06!GO:0009144;purine nucleoside triphosphate metabolic process;2.27098125175833e-06!GO:0046034;ATP metabolic process;2.30054128206034e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.8738424721041e-06!GO:0006366;transcription from RNA polymerase II promoter;2.91928201580291e-06!GO:0007242;intracellular signaling cascade;3.00826678152718e-06!GO:0045259;proton-transporting ATP synthase complex;3.1091488339331e-06!GO:0005793;ER-Golgi intermediate compartment;3.1091488339331e-06!GO:0045333;cellular respiration;3.22326808558435e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.22326808558435e-06!GO:0006613;cotranslational protein targeting to membrane;3.27578845464636e-06!GO:0000151;ubiquitin ligase complex;3.62381177222918e-06!GO:0008632;apoptotic program;3.88120956188109e-06!GO:0051325;interphase;4.44277946690789e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.51485033981247e-06!GO:0015399;primary active transmembrane transporter activity;4.51485033981247e-06!GO:0003713;transcription coactivator activity;4.90445072074325e-06!GO:0003690;double-stranded DNA binding;5.25568455609285e-06!GO:0051329;interphase of mitotic cell cycle;5.49813502221002e-06!GO:0048519;negative regulation of biological process;5.81513763990294e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.8803092063677e-06!GO:0003724;RNA helicase activity;6.53178181908607e-06!GO:0006350;transcription;7.03030763126166e-06!GO:0016563;transcription activator activity;7.6145868539405e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.16851061654104e-06!GO:0005657;replication fork;8.99319334404257e-06!GO:0004674;protein serine/threonine kinase activity;9.03276241588629e-06!GO:0031324;negative regulation of cellular metabolic process;1.21370518355003e-05!GO:0007088;regulation of mitosis;1.22555229267118e-05!GO:0006099;tricarboxylic acid cycle;1.34809121545996e-05!GO:0046356;acetyl-CoA catabolic process;1.34809121545996e-05!GO:0007005;mitochondrion organization and biogenesis;1.38910311583311e-05!GO:0005525;GTP binding;1.64423682503286e-05!GO:0048522;positive regulation of cellular process;1.85223493649208e-05!GO:0006401;RNA catabolic process;1.88701342553488e-05!GO:0007059;chromosome segregation;2.01914644634406e-05!GO:0016363;nuclear matrix;2.18099679146003e-05!GO:0005773;vacuole;2.53237929561882e-05!GO:0009108;coenzyme biosynthetic process;2.59359562529275e-05!GO:0006752;group transfer coenzyme metabolic process;2.81544197470234e-05!GO:0006084;acetyl-CoA metabolic process;2.98800739944802e-05!GO:0007051;spindle organization and biogenesis;3.18543414193882e-05!GO:0008094;DNA-dependent ATPase activity;3.23770918971568e-05!GO:0006302;double-strand break repair;3.41319586596457e-05!GO:0006612;protein targeting to membrane;3.45082430600426e-05!GO:0043623;cellular protein complex assembly;3.66344205886693e-05!GO:0009117;nucleotide metabolic process;4.84341521201958e-05!GO:0010468;regulation of gene expression;4.84423739250118e-05!GO:0016564;transcription repressor activity;6.0361283630878e-05!GO:0009892;negative regulation of metabolic process;6.15443256776008e-05!GO:0000323;lytic vacuole;6.15952147895341e-05!GO:0005764;lysosome;6.15952147895341e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;6.61174193073784e-05!GO:0003924;GTPase activity;6.6624558808726e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.74716409217391e-05!GO:0008234;cysteine-type peptidase activity;6.94265184320808e-05!GO:0000776;kinetochore;7.13443602249714e-05!GO:0065007;biological regulation;7.28136022538209e-05!GO:0005762;mitochondrial large ribosomal subunit;7.62523166824847e-05!GO:0000315;organellar large ribosomal subunit;7.62523166824847e-05!GO:0005798;Golgi-associated vesicle;8.59947729717584e-05!GO:0043492;ATPase activity, coupled to movement of substances;8.92684833334824e-05!GO:0006402;mRNA catabolic process;9.13745358197034e-05!GO:0051427;hormone receptor binding;9.83566995309805e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000100458552854843!GO:0009109;coenzyme catabolic process;0.00011508075993648!GO:0044431;Golgi apparatus part;0.000124197974145057!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000127429837321997!GO:0005770;late endosome;0.000128026253865104!GO:0050790;regulation of catalytic activity;0.000128026253865104!GO:0007093;mitotic cell cycle checkpoint;0.000130365714332571!GO:0009967;positive regulation of signal transduction;0.000131599721553948!GO:0003899;DNA-directed RNA polymerase activity;0.00013286333181906!GO:0003684;damaged DNA binding;0.000138211902339033!GO:0008186;RNA-dependent ATPase activity;0.000140261003632852!GO:0005885;Arp2/3 protein complex;0.000141713322295085!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000143881663603441!GO:0003677;DNA binding;0.000146855926316123!GO:0006417;regulation of translation;0.000158327266159955!GO:0051187;cofactor catabolic process;0.000158610358612623!GO:0035257;nuclear hormone receptor binding;0.000200600222983557!GO:0044440;endosomal part;0.000201763953765984!GO:0010008;endosome membrane;0.000201763953765984!GO:0005667;transcription factor complex;0.000207340598947775!GO:0003678;DNA helicase activity;0.000209535673304905!GO:0032561;guanyl ribonucleotide binding;0.000211349022111837!GO:0019001;guanyl nucleotide binding;0.000211349022111837!GO:0043021;ribonucleoprotein binding;0.000213405486085408!GO:0030384;phosphoinositide metabolic process;0.000261404220514134!GO:0051052;regulation of DNA metabolic process;0.000287246971940279!GO:0015992;proton transport;0.000293057404169228!GO:0006818;hydrogen transport;0.000300395242433609!GO:0003729;mRNA binding;0.000305256447379498!GO:0004518;nuclease activity;0.000323574127787607!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000325610388152897!GO:0008654;phospholipid biosynthetic process;0.000332027333242798!GO:0008270;zinc ion binding;0.000389414743324699!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000391796837118577!GO:0004004;ATP-dependent RNA helicase activity;0.000425709902900768!GO:0006891;intra-Golgi vesicle-mediated transport;0.000435979548954407!GO:0009615;response to virus;0.000435979548954407!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000437351229631329!GO:0003682;chromatin binding;0.000491512443197294!GO:0031982;vesicle;0.00054897954107946!GO:0005637;nuclear inner membrane;0.000632136897970594!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000646045475272391!GO:0004527;exonuclease activity;0.000663587140040555!GO:0031326;regulation of cellular biosynthetic process;0.000663587140040555!GO:0006650;glycerophospholipid metabolic process;0.000672582015727063!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00067538090290811!GO:0032774;RNA biosynthetic process;0.000689282756794585!GO:0000314;organellar small ribosomal subunit;0.000693699129962958!GO:0005763;mitochondrial small ribosomal subunit;0.000693699129962958!GO:0006289;nucleotide-excision repair;0.000743272814950589!GO:0006611;protein export from nucleus;0.000757179172247908!GO:0016853;isomerase activity;0.00079037097103825!GO:0051252;regulation of RNA metabolic process;0.000800012822821315!GO:0007264;small GTPase mediated signal transduction;0.000839570824641245!GO:0000082;G1/S transition of mitotic cell cycle;0.000859385619775549!GO:0006351;transcription, DNA-dependent;0.000875162773316485!GO:0030658;transport vesicle membrane;0.000890236217476636!GO:0015631;tubulin binding;0.00102615543188125!GO:0006383;transcription from RNA polymerase III promoter;0.00105891541297944!GO:0016481;negative regulation of transcription;0.00106499696651363!GO:0048500;signal recognition particle;0.00108866590434967!GO:0045449;regulation of transcription;0.00112334383438663!GO:0046489;phosphoinositide biosynthetic process;0.0011705865673754!GO:0043681;protein import into mitochondrion;0.00117490197697013!GO:0005769;early endosome;0.00122065974108951!GO:0048518;positive regulation of biological process;0.00125056930711264!GO:0007006;mitochondrial membrane organization and biogenesis;0.00126630194741604!GO:0019867;outer membrane;0.0013266247806218!GO:0042802;identical protein binding;0.00136966133847454!GO:0031988;membrane-bound vesicle;0.0014058008292133!GO:0005741;mitochondrial outer membrane;0.00142793475552784!GO:0047485;protein N-terminus binding;0.00143991738797768!GO:0060090;molecular adaptor activity;0.00153625848234833!GO:0000139;Golgi membrane;0.00154501722700197!GO:0031968;organelle outer membrane;0.00160423810474812!GO:0006352;transcription initiation;0.00160607443221635!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00166066491752998!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00166066491752998!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00166066491752998!GO:0000287;magnesium ion binding;0.00168159247503633!GO:0007052;mitotic spindle organization and biogenesis;0.00171059985745059!GO:0022415;viral reproductive process;0.00179642472736563!GO:0008168;methyltransferase activity;0.00182392911295795!GO:0032259;methylation;0.00182392911295795!GO:0031410;cytoplasmic vesicle;0.00183460841352983!GO:0031072;heat shock protein binding;0.00189561338341059!GO:0019843;rRNA binding;0.00191471221537367!GO:0006414;translational elongation;0.00192423398436098!GO:0008312;7S RNA binding;0.00193010455224216!GO:0016741;transferase activity, transferring one-carbon groups;0.001996592119332!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00216498629674427!GO:0045047;protein targeting to ER;0.00216498629674427!GO:0000209;protein polyubiquitination;0.00235887295572816!GO:0016251;general RNA polymerase II transcription factor activity;0.00236094334025974!GO:0030660;Golgi-associated vesicle membrane;0.00258249032549473!GO:0016197;endosome transport;0.00263677108299211!GO:0005048;signal sequence binding;0.00270185249568629!GO:0000922;spindle pole;0.00270353266402415!GO:0006405;RNA export from nucleus;0.00274987305826855!GO:0046474;glycerophospholipid biosynthetic process;0.00274987305826855!GO:0005684;U2-dependent spliceosome;0.00291494000310518!GO:0007265;Ras protein signal transduction;0.00293581949905898!GO:0006607;NLS-bearing substrate import into nucleus;0.00301544095187289!GO:0001772;immunological synapse;0.00301544095187289!GO:0006338;chromatin remodeling;0.00309435508185638!GO:0042110;T cell activation;0.00309679829582855!GO:0003711;transcription elongation regulator activity;0.00311583329034976!GO:0007050;cell cycle arrest;0.00316503288278191!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00327563636236734!GO:0000228;nuclear chromosome;0.00327563636236734!GO:0051092;activation of NF-kappaB transcription factor;0.00332026539860246!GO:0051087;chaperone binding;0.00332356018611776!GO:0006497;protein amino acid lipidation;0.00338136214792774!GO:0006284;base-excision repair;0.00348278871828247!GO:0032508;DNA duplex unwinding;0.00351090343869775!GO:0032392;DNA geometric change;0.00351090343869775!GO:0048471;perinuclear region of cytoplasm;0.00359293425097933!GO:0016023;cytoplasmic membrane-bound vesicle;0.00367766975838883!GO:0043414;biopolymer methylation;0.00380277904200743!GO:0004177;aminopeptidase activity;0.00384284107019536!GO:0051920;peroxiredoxin activity;0.00388086119937603!GO:0031124;mRNA 3'-end processing;0.00388086119937603!GO:0030118;clathrin coat;0.00388582734173106!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00391597005020005!GO:0009165;nucleotide biosynthetic process;0.00391685102778842!GO:0042770;DNA damage response, signal transduction;0.00410016727072274!GO:0003714;transcription corepressor activity;0.00414628332241208!GO:0016859;cis-trans isomerase activity;0.00417938706098686!GO:0008022;protein C-terminus binding;0.00453940435335693!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00465379221730758!GO:0045454;cell redox homeostasis;0.00471264033122908!GO:0022890;inorganic cation transmembrane transporter activity;0.00477610674116232!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00483683893396335!GO:0043596;nuclear replication fork;0.00492244443358105!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00494800464869143!GO:0044452;nucleolar part;0.00504599022370064!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00509851696422191!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00509851696422191!GO:0000910;cytokinesis;0.00534954539876438!GO:0019783;small conjugating protein-specific protease activity;0.00542824011333196!GO:0031252;leading edge;0.0056133932481885!GO:0009889;regulation of biosynthetic process;0.00573988118802914!GO:0048468;cell development;0.00573988118802914!GO:0008033;tRNA processing;0.00580165427641288!GO:0004843;ubiquitin-specific protease activity;0.00602260783813208!GO:0006268;DNA unwinding during replication;0.00602260783813208!GO:0046822;regulation of nucleocytoplasmic transport;0.00612664704801297!GO:0004003;ATP-dependent DNA helicase activity;0.00631856344844108!GO:0051090;regulation of transcription factor activity;0.00653375287858529!GO:0008624;induction of apoptosis by extracellular signals;0.00656159273791444!GO:0009124;nucleoside monophosphate biosynthetic process;0.00659132159095165!GO:0009123;nucleoside monophosphate metabolic process;0.00659132159095165!GO:0000049;tRNA binding;0.00667658164506763!GO:0042393;histone binding;0.00671001759968542!GO:0043488;regulation of mRNA stability;0.00671001759968542!GO:0043487;regulation of RNA stability;0.00671001759968542!GO:0030518;steroid hormone receptor signaling pathway;0.00699334250739557!GO:0051251;positive regulation of lymphocyte activation;0.00700682603530367!GO:0016788;hydrolase activity, acting on ester bonds;0.00704672478924601!GO:0048487;beta-tubulin binding;0.00724314272398309!GO:0051789;response to protein stimulus;0.00732073485020031!GO:0006986;response to unfolded protein;0.00732073485020031!GO:0031123;RNA 3'-end processing;0.0073849922424257!GO:0030127;COPII vesicle coat;0.00741145636512671!GO:0012507;ER to Golgi transport vesicle membrane;0.00741145636512671!GO:0032200;telomere organization and biogenesis;0.00755400545025216!GO:0000723;telomere maintenance;0.00755400545025216!GO:0016584;nucleosome positioning;0.0076216224906103!GO:0030521;androgen receptor signaling pathway;0.00771204567263251!GO:0043621;protein self-association;0.00780995606088704!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00800759133301236!GO:0030663;COPI coated vesicle membrane;0.00810794762738398!GO:0030126;COPI vesicle coat;0.00810794762738398!GO:0016301;kinase activity;0.00828666414302383!GO:0030695;GTPase regulator activity;0.0085074814280325!GO:0046966;thyroid hormone receptor binding;0.0085074814280325!GO:0003746;translation elongation factor activity;0.00852385002818734!GO:0030134;ER to Golgi transport vesicle;0.00852385002818734!GO:0016605;PML body;0.00857329495144263!GO:0004221;ubiquitin thiolesterase activity;0.00872190696908789!GO:0051223;regulation of protein transport;0.00884990983210855!GO:0008047;enzyme activator activity;0.00889994843795223!GO:0006950;response to stress;0.00937098135308428!GO:0004722;protein serine/threonine phosphatase activity;0.00964188711109185!GO:0046914;transition metal ion binding;0.00989084164037699!GO:0000819;sister chromatid segregation;0.00991723016437215!GO:0030137;COPI-coated vesicle;0.00996116027773712!GO:0005774;vacuolar membrane;0.0103647101818947!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0105849717238597!GO:0043281;regulation of caspase activity;0.0106879286634046!GO:0005521;lamin binding;0.0106879286634046!GO:0035258;steroid hormone receptor binding;0.0107376187205908!GO:0000339;RNA cap binding;0.0107676266318048!GO:0009112;nucleobase metabolic process;0.0109066873985106!GO:0008637;apoptotic mitochondrial changes;0.0109120479359136!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0109733328568916!GO:0044438;microbody part;0.0110652852379521!GO:0044439;peroxisomal part;0.0110652852379521!GO:0016311;dephosphorylation;0.0110689768677811!GO:0042158;lipoprotein biosynthetic process;0.0112273259539111!GO:0051336;regulation of hydrolase activity;0.0112756396221252!GO:0005876;spindle microtubule;0.0114135161399123!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0114135161399123!GO:0031902;late endosome membrane;0.0114375324221536!GO:0006007;glucose catabolic process;0.0118287409329213!GO:0006355;regulation of transcription, DNA-dependent;0.0119163959079447!GO:0009116;nucleoside metabolic process;0.0121431913206174!GO:0004532;exoribonuclease activity;0.0121825797798503!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0121825797798503!GO:0006626;protein targeting to mitochondrion;0.0122523694356705!GO:0006506;GPI anchor biosynthetic process;0.012424633826303!GO:0042101;T cell receptor complex;0.0126065519958268!GO:0006376;mRNA splice site selection;0.0126065519958268!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0126065519958268!GO:0006505;GPI anchor metabolic process;0.0126330959603022!GO:0030880;RNA polymerase complex;0.0127033866485127!GO:0000070;mitotic sister chromatid segregation;0.0127688389950438!GO:0016272;prefoldin complex;0.0128056640763881!GO:0006839;mitochondrial transport;0.0131047128011995!GO:0008139;nuclear localization sequence binding;0.0131725897233395!GO:0005874;microtubule;0.0131960459486399!GO:0008287;protein serine/threonine phosphatase complex;0.0132034819856635!GO:0032940;secretion by cell;0.0133400910513311!GO:0009161;ribonucleoside monophosphate metabolic process;0.0136244535885645!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0136244535885645!GO:0016790;thiolester hydrolase activity;0.0136244535885645!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0138471900360947!GO:0045045;secretory pathway;0.0140323759186731!GO:0044454;nuclear chromosome part;0.0140782235625183!GO:0019901;protein kinase binding;0.014086018766609!GO:0000059;protein import into nucleus, docking;0.0141269146700318!GO:0006144;purine base metabolic process;0.0145810092593207!GO:0004197;cysteine-type endopeptidase activity;0.0145821402604984!GO:0016791;phosphoric monoester hydrolase activity;0.0146352044787592!GO:0031570;DNA integrity checkpoint;0.0147669645276166!GO:0005669;transcription factor TFIID complex;0.0147887251725278!GO:0000781;chromosome, telomeric region;0.0147974077594883!GO:0005070;SH3/SH2 adaptor activity;0.0148337365330116!GO:0000792;heterochromatin;0.0149364770020191!GO:0008408;3'-5' exonuclease activity;0.015139322326109!GO:0030867;rough endoplasmic reticulum membrane;0.0151435018521028!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0151545790343311!GO:0031903;microbody membrane;0.0153013187660722!GO:0005778;peroxisomal membrane;0.0153013187660722!GO:0019079;viral genome replication;0.0153129778805138!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0154890114116431!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0156538288858333!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0160444352423475!GO:0030522;intracellular receptor-mediated signaling pathway;0.0163644567224994!GO:0005788;endoplasmic reticulum lumen;0.016549235770777!GO:0046649;lymphocyte activation;0.0168286341293277!GO:0008017;microtubule binding;0.0168336674284918!GO:0043601;nuclear replisome;0.01694216540454!GO:0030894;replisome;0.01694216540454!GO:0051249;regulation of lymphocyte activation;0.01694216540454!GO:0033116;ER-Golgi intermediate compartment membrane;0.01694216540454!GO:0050865;regulation of cell activation;0.0171889140667906!GO:0040029;regulation of gene expression, epigenetic;0.0172408091445793!GO:0005765;lysosomal membrane;0.0175314634900297!GO:0005869;dynactin complex;0.0176031988104223!GO:0000152;nuclear ubiquitin ligase complex;0.0177031760965557!GO:0051539;4 iron, 4 sulfur cluster binding;0.017900574441906!GO:0051881;regulation of mitochondrial membrane potential;0.018328546636741!GO:0006378;mRNA polyadenylation;0.0183617582340008!GO:0030125;clathrin vesicle coat;0.0184385441238569!GO:0030665;clathrin coated vesicle membrane;0.0184385441238569!GO:0044450;microtubule organizing center part;0.0185773285135285!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0186619511890404!GO:0015002;heme-copper terminal oxidase activity;0.0186619511890404!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0186619511890404!GO:0004129;cytochrome-c oxidase activity;0.0186619511890404!GO:0019900;kinase binding;0.0186986748256079!GO:0007034;vacuolar transport;0.0187146288256009!GO:0000725;recombinational repair;0.018720714834126!GO:0000724;double-strand break repair via homologous recombination;0.018720714834126!GO:0018193;peptidyl-amino acid modification;0.0194378564188354!GO:0022406;membrane docking;0.0194384512385537!GO:0048278;vesicle docking;0.0194384512385537!GO:0000738;DNA catabolic process, exonucleolytic;0.0197108995817458!GO:0008276;protein methyltransferase activity;0.0197764867948677!GO:0046467;membrane lipid biosynthetic process;0.0200410446501071!GO:0005083;small GTPase regulator activity;0.020414141901262!GO:0000018;regulation of DNA recombination;0.020428943866851!GO:0051338;regulation of transferase activity;0.0208494923700243!GO:0044437;vacuolar part;0.0209359844768838!GO:0006914;autophagy;0.0211003134574692!GO:0019210;kinase inhibitor activity;0.0211117959447896!GO:0004576;oligosaccharyl transferase activity;0.0212919616116265!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0212919616116265!GO:0015980;energy derivation by oxidation of organic compounds;0.0213305020864226!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0215273957078881!GO:0000428;DNA-directed RNA polymerase complex;0.0215273957078881!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0216128673540181!GO:0043022;ribosome binding;0.0217113230637002!GO:0005832;chaperonin-containing T-complex;0.0221841299449928!GO:0051053;negative regulation of DNA metabolic process;0.0224875664232369!GO:0016569;covalent chromatin modification;0.0226131561575641!GO:0032981;mitochondrial respiratory chain complex I assembly;0.022781752016602!GO:0010257;NADH dehydrogenase complex assembly;0.022781752016602!GO:0033108;mitochondrial respiratory chain complex assembly;0.022781752016602!GO:0016763;transferase activity, transferring pentosyl groups;0.0231385917789741!GO:0045936;negative regulation of phosphate metabolic process;0.0233416362872436!GO:0009966;regulation of signal transduction;0.0236747162767365!GO:0051235;maintenance of localization;0.0237681974083446!GO:0006275;regulation of DNA replication;0.023857164983269!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0239637779676139!GO:0006904;vesicle docking during exocytosis;0.0240057701208318!GO:0007259;JAK-STAT cascade;0.0242291349465102!GO:0019058;viral infectious cycle;0.0244299058435738!GO:0031625;ubiquitin protein ligase binding;0.0245516381861603!GO:0006091;generation of precursor metabolites and energy;0.0248504821907055!GO:0004721;phosphoprotein phosphatase activity;0.0248504821907055!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0248504821907055!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0248504821907055!GO:0009126;purine nucleoside monophosphate metabolic process;0.0248504821907055!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0248504821907055!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0248504821907055!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0248504821907055!GO:0051098;regulation of binding;0.0249841113273495!GO:0000726;non-recombinational repair;0.0253055978445456!GO:0008250;oligosaccharyl transferase complex;0.0254072543215691!GO:0006595;polyamine metabolic process;0.0254424978643338!GO:0004860;protein kinase inhibitor activity;0.0254424978643338!GO:0048524;positive regulation of viral reproduction;0.0256534387847912!GO:0016860;intramolecular oxidoreductase activity;0.0257700646386666!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0263096463220935!GO:0046365;monosaccharide catabolic process;0.0264821105968092!GO:0008629;induction of apoptosis by intracellular signals;0.026657278987906!GO:0042608;T cell receptor binding;0.0270058519684134!GO:0008097;5S rRNA binding;0.0274691739913249!GO:0030119;AP-type membrane coat adaptor complex;0.028146670899012!GO:0003725;double-stranded RNA binding;0.0281577341065557!GO:0030133;transport vesicle;0.0285740830950809!GO:0046982;protein heterodimerization activity;0.0286990582540701!GO:0017134;fibroblast growth factor binding;0.0293862873473804!GO:0019904;protein domain specific binding;0.0296008134214793!GO:0006919;caspase activation;0.0296553156210596!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0296553156210596!GO:0033673;negative regulation of kinase activity;0.0296553156210596!GO:0006469;negative regulation of protein kinase activity;0.0296553156210596!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0297245436355075!GO:0043549;regulation of kinase activity;0.0297245436355075!GO:0008320;protein transmembrane transporter activity;0.0298513367240488!GO:0000077;DNA damage checkpoint;0.0301160539683573!GO:0022411;cellular component disassembly;0.0311659223228787!GO:0030833;regulation of actin filament polymerization;0.0314462314817366!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0314462314817366!GO:0005665;DNA-directed RNA polymerase II, core complex;0.031833493260702!GO:0051540;metal cluster binding;0.031833493260702!GO:0051536;iron-sulfur cluster binding;0.031833493260702!GO:0050852;T cell receptor signaling pathway;0.0319767050097437!GO:0005784;translocon complex;0.0322892729750909!GO:0005791;rough endoplasmic reticulum;0.0323295460994392!GO:0005095;GTPase inhibitor activity;0.0323295460994392!GO:0006270;DNA replication initiation;0.0325924646151957!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0328757767213709!GO:0008213;protein amino acid alkylation;0.0330044386510031!GO:0006479;protein amino acid methylation;0.0330044386510031!GO:0004659;prenyltransferase activity;0.0333425954136614!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0333425954136614!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0333425954136614!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0333425954136614!GO:0046426;negative regulation of JAK-STAT cascade;0.0338771005735993!GO:0000793;condensed chromosome;0.0342896402559273!GO:0030131;clathrin adaptor complex;0.0343014756905977!GO:0030176;integral to endoplasmic reticulum membrane;0.0345470673066403!GO:0000178;exosome (RNase complex);0.0346183722130779!GO:0031577;spindle checkpoint;0.0346369020938584!GO:0046164;alcohol catabolic process;0.0347042047916112!GO:0051348;negative regulation of transferase activity;0.0347124823569517!GO:0030132;clathrin coat of coated pit;0.0347733152328724!GO:0003887;DNA-directed DNA polymerase activity;0.0350690873001232!GO:0006266;DNA ligation;0.0351379626130876!GO:0046483;heterocycle metabolic process;0.0352522834104139!GO:0022884;macromolecule transmembrane transporter activity;0.0356752317268121!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0356752317268121!GO:0045792;negative regulation of cell size;0.036112771403669!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0361374859858299!GO:0045892;negative regulation of transcription, DNA-dependent;0.0361623495602573!GO:0050681;androgen receptor binding;0.0371761711184886!GO:0050870;positive regulation of T cell activation;0.0374094737261004!GO:0008538;proteasome activator activity;0.0374268547910616!GO:0008180;signalosome;0.0382303769325608!GO:0051452;cellular pH reduction;0.0382534992546908!GO:0051453;regulation of cellular pH;0.0382534992546908!GO:0045851;pH reduction;0.0382534992546908!GO:0030041;actin filament polymerization;0.0388827769553524!GO:0005092;GDP-dissociation inhibitor activity;0.0388929652328172!GO:0050811;GABA receptor binding;0.0393852323230308!GO:0005096;GTPase activator activity;0.0405270555693131!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0405582410170796!GO:0019320;hexose catabolic process;0.0407530653801699!GO:0007021;tubulin folding;0.0410475381833448!GO:0002378;immunoglobulin biosynthetic process;0.0411553936454933!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0411553936454933!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0411553936454933!GO:0006406;mRNA export from nucleus;0.0416478883454848!GO:0016570;histone modification;0.0421743150806551!GO:0005777;peroxisome;0.0422736777229644!GO:0042579;microbody;0.0422736777229644!GO:0030258;lipid modification;0.0423301039305599!GO:0000123;histone acetyltransferase complex;0.0428099189801253!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0429711488697483!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0429711488697483!GO:0046979;TAP2 binding;0.0433423815562458!GO:0046977;TAP binding;0.0433423815562458!GO:0046978;TAP1 binding;0.0433423815562458!GO:0050863;regulation of T cell activation;0.0436671954547347!GO:0030308;negative regulation of cell growth;0.0436671954547347!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0446251466616942!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0446251466616942!GO:0051059;NF-kappaB binding;0.0446619459287054!GO:0006516;glycoprotein catabolic process;0.0447861342780708!GO:0001836;release of cytochrome c from mitochondria;0.0453263051180246!GO:0042326;negative regulation of phosphorylation;0.0453346013654336!GO:0051091;positive regulation of transcription factor activity;0.0454432001605753!GO:0030332;cyclin binding;0.0465915282026773!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0468014807537974!GO:0031371;ubiquitin conjugating enzyme complex;0.0470022734761387!GO:0019976;interleukin-2 binding;0.0473272847614655!GO:0004911;interleukin-2 receptor activity;0.0473272847614655!GO:0045815;positive regulation of gene expression, epigenetic;0.0475660377719679!GO:0006470;protein amino acid dephosphorylation;0.0476348143716271!GO:0000096;sulfur amino acid metabolic process;0.0476348143716271!GO:0007017;microtubule-based process;0.0476348143716271!GO:0045859;regulation of protein kinase activity;0.0476348143716271!GO:0019318;hexose metabolic process;0.0478778981595671!GO:0046983;protein dimerization activity;0.0478778981595671!GO:0005996;monosaccharide metabolic process;0.0480590537221135!GO:0043284;biopolymer biosynthetic process;0.048124673121809!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.048581529988135!GO:0008625;induction of apoptosis via death domain receptors;0.0485936565088789!GO:0006984;ER-nuclear signaling pathway;0.0491418227826723!GO:0043631;RNA polyadenylation;0.0493383290444089!GO:0006096;glycolysis;0.0498124958843946!GO:0015923;mannosidase activity;0.0498124958843946
|sample_id=11792
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=ELF1,2,4:2.4225797992;CDX1,2,4:2.36152109406;PAX3,7:2.02955706361;TLX2:1.97495991439;RUNX1..3:1.80823656688;RORA:1.71028300915;PAX4:1.44400919428;ETS1,2:1.38177498649;POU1F1:1.32997559008;PDX1:1.26214604126;SPI1:1.2572236128;STAT1,3:1.25025715905;GATA6:1.24581861593;E2F1..5:1.24316591859;ZBTB16:1.14427908245;DMAP1_NCOR{1,2}_SMARC:1.13162252043;IKZF2:0.995564317624;ELK1,4_GABP{A,B1}:0.99351125788;IRF1,2:0.934219235629;T:0.919102345962;SPIB:0.891876347594;YY1:0.870388825265;PBX1:0.810769520764;NFY{A,B,C}:0.77872957115;FOXA2:0.743621136257;PITX1..3:0.723150673655;FOX{F1,F2,J1}:0.718544149635;BREu{core}:0.716569585125;CRX:0.699200147735;POU2F1..3:0.622188965876;LEF1_TCF7_TCF7L1,2:0.616154337024;TGIF1:0.61105031882;FOXP1:0.593509608725;NKX6-1,2:0.592124060955;MYB:0.573887419428;NKX2-2,8:0.55223844389;PAX8:0.547027498561;NANOG{mouse}:0.453961723694;IRF7:0.434031238455;MYOD1:0.429398501394;FOXO1,3,4:0.407153723862;NKX3-1:0.398875009398;NRF1:0.341411297461;SNAI1..3:0.324741621181;FOXM1:0.319624909439;BPTF:0.306981226276;ZEB1:0.299655584488;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.275572082126;OCT4_SOX2{dimer}:0.265882398857;RFX2..5_RFXANK_RFXAP:0.261777491931;ATF5_CREB3:0.246975281701;CREB1:0.243028612516;LMO2:0.218497393815;NR5A1,2:0.208572686042;STAT5{A,B}:0.183060426671;ZNF143:0.162951928202;SREBF1,2:0.156525542056;SPZ1:0.152270212342;FOX{D1,D2}:0.151274635406;AIRE:0.142274490519;CUX2:0.124698292138;HMX1:0.118238225192;HOX{A6,A7,B6,B7}:0.0982188030934;POU3F1..4:0.0978713199498;STAT2,4,6:0.0735893297243;FOX{I1,J2}:0.065328192823;SOX5:0.0312451627311;ALX1:0.00495541391476;FOXN1:-0.0230689976995;NFKB1_REL_RELA:-0.0409055225295;GFI1:-0.0560383240444;NR3C1:-0.0736799319077;PAX2:-0.0903577577763;GCM1,2:-0.0910314572599;HES1:-0.0933115389313;NKX2-1,4:-0.117062127864;JUN:-0.119819618523;AHR_ARNT_ARNT2:-0.141000178831;TFDP1:-0.155468566125;EP300:-0.160507880565;PAX6:-0.164526037412;HNF4A_NR2F1,2:-0.181668219889;TOPORS:-0.194332227294;PRRX1,2:-0.212845912842;NFATC1..3:-0.227735659826;TAL1_TCF{3,4,12}:-0.23318023217;NFIL3:-0.236948116103;FOXD3:-0.245243066725;RXRA_VDR{dimer}:-0.26017118765;SMAD1..7,9:-0.272122435622;GLI1..3:-0.274660697923;AR:-0.288301781438;ZNF148:-0.296491567897;NFE2L1:-0.309885736413;ATF4:-0.318511990286;HNF1A:-0.349609679472;NR1H4:-0.379115776318;RREB1:-0.388351379183;EVI1:-0.389934137742;HAND1,2:-0.415326012888;ZNF423:-0.426949778269;POU5F1:-0.428440522956;MYFfamily:-0.431128257173;SOX2:-0.433534868007;FOXQ1:-0.438131373726;HMGA1,2:-0.439580113102;ARID5B:-0.440268658138;VSX1,2:-0.464111085295;SOX{8,9,10}:-0.475945155446;ATF2:-0.478694303029;HOXA9_MEIS1:-0.486701938644;ADNP_IRX_SIX_ZHX:-0.489684832136;NKX2-3_NKX2-5:-0.510251975502;ZNF384:-0.524965854372;FOXP3:-0.526428299005;RBPJ:-0.548466043177;PPARG:-0.553919853902;ATF6:-0.566257832951;RFX1:-0.566496712603;BACH2:-0.570455727829;ZNF238:-0.571437266393;SRF:-0.574481660626;NFIX:-0.576535207054;NFE2L2:-0.581957109905;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.589400106455;CEBPA,B_DDIT3:-0.593482304493;FOS_FOS{B,L1}_JUN{B,D}:-0.604473419897;TFCP2:-0.621479883174;NFE2:-0.628712506912;TFAP4:-0.63240555448;ESR1:-0.64814802849;FOSL2:-0.696267014346;HLF:-0.711557056722;NHLH1,2:-0.712677301859;TP53:-0.737054020332;HBP1_HMGB_SSRP1_UBTF:-0.75193336092;NANOG:-0.754396555554;PAX5:-0.784863457083;UFEwm:-0.792441220222;REST:-0.794309858934;ALX4:-0.802971727954;ESRRA:-0.807918499612;DBP:-0.815819468543;ONECUT1,2:-0.827904147989;XCPE1{core}:-0.883599924917;LHX3,4:-0.889661510277;MEF2{A,B,C,D}:-0.896761673748;ZBTB6:-0.90936508934;CDC5L:-0.934340491975;MED-1{core}:-0.939824504668;HOX{A5,B5}:-0.973799782254;MZF1:-0.974574666273;MYBL2:-0.984708508093;TBX4,5:-1.03093035664;GFI1B:-1.04419037794;SOX17:-1.05084037165;MTE{core}:-1.08458474303;ZFP161:-1.11059656206;NR6A1:-1.11110666689;GATA4:-1.11312469188;KLF4:-1.11418270695;MAFB:-1.12147562741;HIF1A:-1.13885659483;EBF1:-1.14250238556;MAZ:-1.1593502465;PRDM1:-1.1900718137;GTF2I:-1.21018412467;HOX{A4,D4}:-1.22547153947;HSF1,2:-1.24396222762;EGR1..3:-1.26478206479;MTF1:-1.2657690984;POU6F1:-1.27340077154;TEF:-1.31277077181;GZF1:-1.32634814926;NKX3-2:-1.32664433237;EN1,2:-1.38652391648;GTF2A1,2:-1.39009122427;TFAP2B:-1.43396329261;bHLH_family:-1.44501274323;PATZ1:-1.44676798902;HIC1:-1.45503082563;TBP:-1.46404935128;ZIC1..3:-1.47356279401;RXR{A,B,G}:-1.58045686094;TFAP2{A,C}:-1.58151443374;TEAD1:-1.58979762693;SP1:-1.64935541454;TLX1..3_NFIC{dimer}:-1.7761799137;XBP1:-1.79941677996;PAX1,9:-1.80675293102;IKZF1:-1.98534804817;FOXL1:-2.03566617497
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11792-124C1;search_select_hide=table117:FF:11792-124C1
}}
}}

Latest revision as of 18:20, 4 June 2020

Name:CD4+CD25-CD45RA- memory conventional T cells expanded, donor1
Species:Human (Homo sapiens)
Library ID:CNhs13215
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age25
cell typeT cell
cell lineNA
companyNA
collaborationMichael Rehli (University of Regensberg)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number13
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004924
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13215 CAGE DRX008193 DRR009065
Accession ID Hg19

Library idBAMCTSS
CNhs13215 DRZ000490 DRZ001875
Accession ID Hg38

Library idBAMCTSS
CNhs13215 DRZ011840 DRZ013225
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.0887
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.139
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.421
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0466
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.0466
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0.162
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0754
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.0275
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.272
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.207
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.74
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.312
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.0466
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0823
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.0466
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.109
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.0466
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.824
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.664
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.47
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.563
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.185
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.627
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.37
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.124
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.337
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.128
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.154
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.0466
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.805
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.873
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.0466
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.127
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13215

Jaspar motifP-value
MA0002.21.76451e-8
MA0003.10.85
MA0004.10.805
MA0006.10.534
MA0007.10.576
MA0009.10.249
MA0014.10.783
MA0017.10.0929
MA0018.20.885
MA0019.10.512
MA0024.10.0307
MA0025.10.0802
MA0027.10.602
MA0028.11.6218e-5
MA0029.10.495
MA0030.10.385
MA0031.10.48
MA0035.20.0416
MA0038.10.157
MA0039.20.772
MA0040.10.207
MA0041.10.317
MA0042.10.697
MA0043.10.0482
MA0046.10.0991
MA0047.20.411
MA0048.10.786
MA0050.16.159e-7
MA0051.10.0095
MA0052.10.00323
MA0055.10.918
MA0057.10.994
MA0058.10.937
MA0059.10.381
MA0060.10.415
MA0061.10.0923
MA0062.21.10158e-15
MA0065.20.029
MA0066.10.271
MA0067.10.976
MA0068.10.124
MA0069.10.807
MA0070.10.582
MA0071.10.427
MA0072.10.707
MA0073.10.786
MA0074.10.522
MA0076.12.67799e-8
MA0077.10.0421
MA0078.10.903
MA0079.20.494
MA0080.21.08937e-12
MA0081.10.0239
MA0083.10.0438
MA0084.10.894
MA0087.10.448
MA0088.10.0316
MA0090.11.98398e-4
MA0091.10.824
MA0092.10.492
MA0093.10.779
MA0099.23.97943e-4
MA0100.10.216
MA0101.10.709
MA0102.20.322
MA0103.10.0643
MA0104.20.179
MA0105.13.65937e-5
MA0106.10.808
MA0107.10.253
MA0108.23.46494e-14
MA0111.10.055
MA0112.20.169
MA0113.10.915
MA0114.10.154
MA0115.10.389
MA0116.11.87927e-5
MA0117.10.781
MA0119.10.489
MA0122.10.817
MA0124.10.828
MA0125.10.723
MA0131.10.259
MA0135.10.0888
MA0136.14.09859e-24
MA0137.20.218
MA0138.20.178
MA0139.10.00516
MA0140.10.0538
MA0141.10.464
MA0142.10.455
MA0143.10.0998
MA0144.10.24
MA0145.10.796
MA0146.10.163
MA0147.10.152
MA0148.10.989
MA0149.10.0749
MA0150.10.305
MA0152.10.0278
MA0153.10.105
MA0154.10.0165
MA0155.10.717
MA0156.12.32561e-22
MA0157.10.138
MA0159.10.222
MA0160.10.364
MA0162.10.665
MA0163.15.84504e-12
MA0164.10.685
MA0258.10.0763
MA0259.10.387



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13215

Novel motifP-value
10.113
100.0103
1000.767
1010.0955
1020.522
1030.16
1040.679
1050.154
1060.596
1070.478
1080.675
1090.0406
110.0402
1100.411
1110.384
1120.122
1130.474
1140.238
1150.116
1160.582
1170.0064
1180.4
1190.539
120.509
1200.482
1210.634
1220.326
1234.42326e-4
1240.0599
1250.978
1260.434
1270.377
1280.663
1290.161
130.415
1300.889
1310.803
1320.959
1330.247
1340.702
1350.748
1360.657
1370.0709
1380.289
1390.268
140.396
1400.0213
1410.655
1420.952
1430.00139
1440.479
1450.248
1460.442
1470.0258
1480.0669
1490.807
150.0998
1500.463
1510.6
1520.329
1530.982
1540.724
1550.0143
1560.585
1570.0644
1580.289
1590.383
160.623
1600.559
1610.175
1620.166
1630.448
1640.118
1650.183
1660.797
1670.269
1680.2
1690.348
170.872
180.611
190.609
20.909
200.758
210.312
220.989
230.54
240.586
250.0645
260.123
270.155
280.56
290.0176
30.0464
300.198
310.932
320.307
330.528
340.958
350.185
360.0248
370.229
380.666
390.318
40.609
400.348
410.485
420.0647
430.444
440.268
450.499
460.0895
470.0115
480.0349
490.161
50.565
500.786
510.609
520.298
530.216
540.806
550.552
560.465
570.206
580.111
590.31
60.673
600.514
610.0812
620.0481
630.514
640.128
650.916
660.819
670.924
680.688
690.864
70.243
700.0586
710.0351
720.0561
730.552
740.379
750.0162
760.434
770.754
780.0296
790.239
80.431
800.0948
810.42
820.139
830.614
840.196
850.705
860.168
870.362
880.749
890.682
90.761
900.0166
910.636
920.395
930.205
940.107
950.0103
960.0541
970.311
980.303
990.247



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13215


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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