FF:11838-124H2: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005617 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008562;DRR009434;DRZ000859;DRZ002244;DRZ012209;DRZ013594 | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000274 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor4.CNhs13097.11838-124H2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor4.CNhs13097.11838-124H2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor4.CNhs13097.11838-124H2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor4.CNhs13097.11838-124H2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor4.CNhs13097.11838-124H2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11838-124H2 | |id=FF:11838-124H2 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000274 | ||
|is_obsolete= | |||
|library_id=CNhs13097 | |||
|library_id_phase_based=2:CNhs13097 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11838 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11838 | |||
|name=mesenchymal precursor cell - ovarian cancer metastasis, donor4 | |name=mesenchymal precursor cell - ovarian cancer metastasis, donor4 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13097,LSID1001,release013,COMPLETED | |profile_hcage=CNhs13097,LSID1001,release013,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=124 | |rna_box=124 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=21.3486 | |rna_weight_ug=21.3486 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.93863826010996e-226!GO:0005737;cytoplasm;2.24027940169224e-193!GO:0044444;cytoplasmic part;1.13261660948426e-145!GO:0043226;organelle;1.62247805436259e-138!GO:0043229;intracellular organelle;3.25630652637527e-138!GO:0043231;intracellular membrane-bound organelle;1.95600445036815e-133!GO:0043227;membrane-bound organelle;3.39148818849528e-133!GO:0044422;organelle part;2.44115787391247e-114!GO:0044446;intracellular organelle part;5.01870794193556e-113!GO:0005515;protein binding;1.76853521917998e-79!GO:0032991;macromolecular complex;6.12058687826572e-76!GO:0030529;ribonucleoprotein complex;1.86130195776481e-65!GO:0044238;primary metabolic process;1.25245834345817e-60!GO:0044237;cellular metabolic process;3.86789417955111e-59!GO:0031090;organelle membrane;2.01265467249007e-57!GO:0043170;macromolecule metabolic process;7.6176735066382e-55!GO:0005739;mitochondrion;1.81252328632361e-53!GO:0043233;organelle lumen;2.11060198480688e-53!GO:0031974;membrane-enclosed lumen;2.11060198480688e-53!GO:0019538;protein metabolic process;7.06879156344352e-52!GO:0003723;RNA binding;1.11036983981248e-48!GO:0044428;nuclear part;1.32523430412468e-47!GO:0044260;cellular macromolecule metabolic process;2.5020143791847e-46!GO:0033036;macromolecule localization;4.14214153225095e-46!GO:0044267;cellular protein metabolic process;4.80898199668195e-45!GO:0015031;protein transport;6.17708243354932e-45!GO:0045184;establishment of protein localization;3.40915444533298e-43!GO:0016043;cellular component organization and biogenesis;3.87185737822459e-43!GO:0008104;protein localization;4.07654930274978e-43!GO:0006412;translation;2.92030266793707e-42!GO:0005840;ribosome;4.09593536221192e-42!GO:0005829;cytosol;2.98268654498885e-40!GO:0009058;biosynthetic process;3.09580645894833e-39!GO:0043234;protein complex;6.71805354545698e-39!GO:0003735;structural constituent of ribosome;9.8655746687912e-38!GO:0009059;macromolecule biosynthetic process;2.00545500932476e-37!GO:0044429;mitochondrial part;2.07622848084448e-37!GO:0046907;intracellular transport;1.29547051542117e-35!GO:0031967;organelle envelope;9.76619064048687e-35!GO:0031975;envelope;2.20253125900883e-34!GO:0033279;ribosomal subunit;2.93894467289844e-33!GO:0044249;cellular biosynthetic process;2.49285335311526e-32!GO:0006396;RNA processing;4.43530407776114e-32!GO:0005634;nucleus;4.56239587438818e-31!GO:0006886;intracellular protein transport;4.7201358809582e-29!GO:0031981;nuclear lumen;5.55545768208212e-29!GO:0005783;endoplasmic reticulum;8.96081026245707e-28!GO:0012505;endomembrane system;4.05394249475489e-27!GO:0016071;mRNA metabolic process;4.84837306381332e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.15783499039411e-26!GO:0005740;mitochondrial envelope;3.53354100875641e-26!GO:0008380;RNA splicing;9.02538909940236e-26!GO:0031966;mitochondrial membrane;5.73567483581244e-25!GO:0065003;macromolecular complex assembly;7.15218363511638e-24!GO:0051649;establishment of cellular localization;1.01365662130065e-23!GO:0051641;cellular localization;1.35613983422354e-23!GO:0006397;mRNA processing;2.37132214447569e-23!GO:0005794;Golgi apparatus;3.88825896173862e-23!GO:0019866;organelle inner membrane;7.12377757605201e-23!GO:0043283;biopolymer metabolic process;1.47100039452845e-22!GO:0044445;cytosolic part;1.75533558826892e-22!GO:0005743;mitochondrial inner membrane;7.12567807978822e-22!GO:0006119;oxidative phosphorylation;8.14069210833758e-22!GO:0022607;cellular component assembly;1.10003885429313e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.74958640999045e-21!GO:0044432;endoplasmic reticulum part;6.33278752180925e-21!GO:0006996;organelle organization and biogenesis;3.23369099572688e-20!GO:0006457;protein folding;9.03849994989978e-20!GO:0016462;pyrophosphatase activity;9.05804579984289e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.39632793566734e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;1.30474327492132e-19!GO:0043228;non-membrane-bound organelle;2.09476364999688e-19!GO:0043232;intracellular non-membrane-bound organelle;2.09476364999688e-19!GO:0010467;gene expression;2.29497582668044e-19!GO:0048770;pigment granule;4.27541338711788e-19!GO:0042470;melanosome;4.27541338711788e-19!GO:0017111;nucleoside-triphosphatase activity;7.29688818034867e-19!GO:0044455;mitochondrial membrane part;1.3258686246717e-18!GO:0005681;spliceosome;3.86916115032151e-18!GO:0000166;nucleotide binding;4.20626821835539e-18!GO:0015934;large ribosomal subunit;1.05885170414331e-17!GO:0005654;nucleoplasm;1.29506061280452e-17!GO:0016192;vesicle-mediated transport;4.15818576490238e-17!GO:0015935;small ribosomal subunit;1.7677697578365e-16!GO:0048193;Golgi vesicle transport;1.12182352537051e-15!GO:0005746;mitochondrial respiratory chain;1.64286794718221e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.64286794718221e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.10075576373784e-15!GO:0044265;cellular macromolecule catabolic process;2.76616057462499e-15!GO:0022618;protein-RNA complex assembly;4.70947831191661e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;6.80883856042753e-15!GO:0043285;biopolymer catabolic process;6.95180357242397e-15!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.95888979321512e-15!GO:0016874;ligase activity;1.31139989758136e-14!GO:0019941;modification-dependent protein catabolic process;1.42862594119385e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.42862594119385e-14!GO:0044257;cellular protein catabolic process;1.51943168318748e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.231659777528e-14!GO:0003954;NADH dehydrogenase activity;2.231659777528e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.231659777528e-14!GO:0005789;endoplasmic reticulum membrane;2.29837148733733e-14!GO:0044451;nucleoplasm part;2.44273629610818e-14!GO:0006512;ubiquitin cycle;2.72900866884821e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.80277940028906e-14!GO:0009057;macromolecule catabolic process;3.32535687408283e-14!GO:0008134;transcription factor binding;4.19364978077361e-14!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.96294791120033e-14!GO:0031980;mitochondrial lumen;7.96294791120033e-14!GO:0005759;mitochondrial matrix;7.96294791120033e-14!GO:0030163;protein catabolic process;8.38997480932205e-14!GO:0051186;cofactor metabolic process;1.02062256317442e-13!GO:0051082;unfolded protein binding;1.29765425506408e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.49805646097934e-13!GO:0017076;purine nucleotide binding;1.75912160043226e-13!GO:0006605;protein targeting;1.77365672160472e-13!GO:0044248;cellular catabolic process;1.95225663398518e-13!GO:0032553;ribonucleotide binding;2.34457259574249e-13!GO:0032555;purine ribonucleotide binding;2.34457259574249e-13!GO:0008135;translation factor activity, nucleic acid binding;2.55911336565756e-13!GO:0043412;biopolymer modification;3.15184557568258e-13!GO:0012501;programmed cell death;5.58495528986031e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.234351133122e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.29573981862615e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.17907740746414e-12!GO:0045271;respiratory chain complex I;1.17907740746414e-12!GO:0005747;mitochondrial respiratory chain complex I;1.17907740746414e-12!GO:0006915;apoptosis;1.60830028974083e-12!GO:0006464;protein modification process;1.65916536162672e-12!GO:0005730;nucleolus;1.70293190579282e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.66411653076009e-12!GO:0042773;ATP synthesis coupled electron transport;2.66411653076009e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.73557119732965e-12!GO:0008219;cell death;9.55484322446904e-12!GO:0016265;death;9.55484322446904e-12!GO:0005793;ER-Golgi intermediate compartment;2.61487587770928e-11!GO:0009055;electron carrier activity;2.7376542967128e-11!GO:0005768;endosome;4.29422891206143e-11!GO:0044431;Golgi apparatus part;7.96133022665463e-11!GO:0009259;ribonucleotide metabolic process;9.06872526527803e-11!GO:0048523;negative regulation of cellular process;9.12137642936085e-11!GO:0006732;coenzyme metabolic process;1.18958545179516e-10!GO:0005761;mitochondrial ribosome;1.79537716506507e-10!GO:0000313;organellar ribosome;1.79537716506507e-10!GO:0009150;purine ribonucleotide metabolic process;2.42831123241906e-10!GO:0006413;translational initiation;2.53119373462352e-10!GO:0003743;translation initiation factor activity;2.69510937536959e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.23089374075558e-10!GO:0006163;purine nucleotide metabolic process;3.3447093815306e-10!GO:0003924;GTPase activity;3.7857901628102e-10!GO:0008565;protein transporter activity;5.8002090571167e-10!GO:0007049;cell cycle;6.49589180429748e-10!GO:0009152;purine ribonucleotide biosynthetic process;7.93610343633465e-10!GO:0009260;ribonucleotide biosynthetic process;8.24760126458104e-10!GO:0008639;small protein conjugating enzyme activity;9.51187493934136e-10!GO:0006164;purine nucleotide biosynthetic process;1.17810750869648e-09!GO:0019787;small conjugating protein ligase activity;1.23612093010864e-09!GO:0005524;ATP binding;1.33582598044201e-09!GO:0030554;adenyl nucleotide binding;1.50987309573849e-09!GO:0043687;post-translational protein modification;1.5649203051985e-09!GO:0032559;adenyl ribonucleotide binding;1.57945299572243e-09!GO:0004842;ubiquitin-protein ligase activity;1.60723559568916e-09!GO:0005635;nuclear envelope;1.82664607719919e-09!GO:0006259;DNA metabolic process;1.94390607344535e-09!GO:0030120;vesicle coat;1.96022483073984e-09!GO:0030662;coated vesicle membrane;1.96022483073984e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.24466302051143e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.24635273957748e-09!GO:0048519;negative regulation of biological process;2.56646023095735e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;2.99733318358421e-09!GO:0000375;RNA splicing, via transesterification reactions;2.99733318358421e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.99733318358421e-09!GO:0043067;regulation of programmed cell death;3.03166823149372e-09!GO:0016023;cytoplasmic membrane-bound vesicle;3.42454005233695e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.62463106885488e-09!GO:0009199;ribonucleoside triphosphate metabolic process;3.65324937979987e-09!GO:0006446;regulation of translational initiation;3.73314654161373e-09!GO:0031988;membrane-bound vesicle;3.79453065860241e-09!GO:0042981;regulation of apoptosis;4.12659737032628e-09!GO:0006461;protein complex assembly;4.8427827486591e-09!GO:0005788;endoplasmic reticulum lumen;5.20416813978633e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.55269617320597e-09!GO:0009144;purine nucleoside triphosphate metabolic process;5.55269617320597e-09!GO:0009141;nucleoside triphosphate metabolic process;6.3219022098509e-09!GO:0015986;ATP synthesis coupled proton transport;6.84022252642058e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.84022252642058e-09!GO:0009142;nucleoside triphosphate biosynthetic process;6.93478687665986e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.93478687665986e-09!GO:0000139;Golgi membrane;7.06412512350043e-09!GO:0048475;coated membrane;7.43774906819232e-09!GO:0030117;membrane coat;7.43774906819232e-09!GO:0006913;nucleocytoplasmic transport;7.82911639926273e-09!GO:0003712;transcription cofactor activity;8.90944853881659e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.02524543090502e-08!GO:0016881;acid-amino acid ligase activity;1.02720298245917e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.06379065864566e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.06379065864566e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.12196422349962e-08!GO:0009056;catabolic process;1.27355652651121e-08!GO:0051169;nuclear transport;1.42020168858214e-08!GO:0031965;nuclear membrane;1.57991539668135e-08!GO:0043069;negative regulation of programmed cell death;2.13764822662672e-08!GO:0016604;nuclear body;3.0962264788333e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.13140077994313e-08!GO:0019829;cation-transporting ATPase activity;3.36214806062014e-08!GO:0016887;ATPase activity;4.56182643456918e-08!GO:0043066;negative regulation of apoptosis;5.86161157393921e-08!GO:0016491;oxidoreductase activity;7.11987978580547e-08!GO:0046034;ATP metabolic process;8.32743320479738e-08!GO:0031982;vesicle;8.56827665198792e-08!GO:0042623;ATPase activity, coupled;9.27960150562286e-08!GO:0031410;cytoplasmic vesicle;9.76015066247892e-08!GO:0005773;vacuole;1.07956789168315e-07!GO:0006916;anti-apoptosis;1.16720758201084e-07!GO:0044453;nuclear membrane part;1.21329586654629e-07!GO:0006754;ATP biosynthetic process;1.36125015984044e-07!GO:0006753;nucleoside phosphate metabolic process;1.36125015984044e-07!GO:0051246;regulation of protein metabolic process;1.39404753979299e-07!GO:0044440;endosomal part;1.42542815800411e-07!GO:0010008;endosome membrane;1.42542815800411e-07!GO:0042254;ribosome biogenesis and assembly;1.46467188191024e-07!GO:0009060;aerobic respiration;1.7424777120533e-07!GO:0017038;protein import;2.20905973443606e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.59847047822074e-07!GO:0000074;regulation of progression through cell cycle;3.27807823129614e-07!GO:0051726;regulation of cell cycle;3.30821498043596e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.60166866474226e-07!GO:0031252;leading edge;4.14299153868441e-07!GO:0051188;cofactor biosynthetic process;4.60628051998514e-07!GO:0003714;transcription corepressor activity;6.62165124666211e-07!GO:0022402;cell cycle process;7.05087928557272e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.85712290450051e-07!GO:0016607;nuclear speck;8.94574650718308e-07!GO:0016787;hydrolase activity;9.06529887506523e-07!GO:0005770;late endosome;1.01208783174137e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.06133641647183e-06!GO:0005798;Golgi-associated vesicle;1.11220812241534e-06!GO:0045333;cellular respiration;1.31417763923366e-06!GO:0004386;helicase activity;1.42751635512817e-06!GO:0007243;protein kinase cascade;2.08510018585927e-06!GO:0006099;tricarboxylic acid cycle;2.24636488160412e-06!GO:0046356;acetyl-CoA catabolic process;2.24636488160412e-06!GO:0006399;tRNA metabolic process;2.28336343429234e-06!GO:0000323;lytic vacuole;2.29562042241843e-06!GO:0005764;lysosome;2.29562042241843e-06!GO:0005525;GTP binding;2.89431248295996e-06!GO:0007005;mitochondrion organization and biogenesis;3.02190822618472e-06!GO:0006091;generation of precursor metabolites and energy;3.45202110942474e-06!GO:0005905;coated pit;3.55208426368103e-06!GO:0051187;cofactor catabolic process;3.72868439427198e-06!GO:0008026;ATP-dependent helicase activity;3.7952780459137e-06!GO:0009117;nucleotide metabolic process;3.99802468498886e-06!GO:0051789;response to protein stimulus;4.4368339332496e-06!GO:0006986;response to unfolded protein;4.4368339332496e-06!GO:0006793;phosphorus metabolic process;4.48797832880949e-06!GO:0006796;phosphate metabolic process;4.48797832880949e-06!GO:0005769;early endosome;5.19642360890306e-06!GO:0045786;negative regulation of progression through cell cycle;5.65996596323522e-06!GO:0065002;intracellular protein transport across a membrane;5.8708832057974e-06!GO:0004298;threonine endopeptidase activity;6.56205754476121e-06!GO:0016740;transferase activity;6.67721151974611e-06!GO:0005643;nuclear pore;7.04832907597621e-06!GO:0045454;cell redox homeostasis;7.81083557802735e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.96287232347159e-06!GO:0004812;aminoacyl-tRNA ligase activity;7.96287232347159e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.96287232347159e-06!GO:0043038;amino acid activation;8.09648040081562e-06!GO:0006418;tRNA aminoacylation for protein translation;8.09648040081562e-06!GO:0043039;tRNA aminoacylation;8.09648040081562e-06!GO:0006084;acetyl-CoA metabolic process;8.524180580862e-06!GO:0045259;proton-transporting ATP synthase complex;1.04851181653397e-05!GO:0016310;phosphorylation;1.2451587945954e-05!GO:0009109;coenzyme catabolic process;1.34650121677853e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.51674218927164e-05!GO:0048522;positive regulation of cellular process;1.53948667859747e-05!GO:0008654;phospholipid biosynthetic process;1.6838795750924e-05!GO:0009108;coenzyme biosynthetic process;1.83217479479976e-05!GO:0006613;cotranslational protein targeting to membrane;2.02445609166301e-05!GO:0003676;nucleic acid binding;2.04102433631854e-05!GO:0032561;guanyl ribonucleotide binding;2.06075041199032e-05!GO:0019001;guanyl nucleotide binding;2.06075041199032e-05!GO:0016564;transcription repressor activity;2.0896311077412e-05!GO:0044262;cellular carbohydrate metabolic process;2.0896311077412e-05!GO:0008361;regulation of cell size;2.12581425787966e-05!GO:0006752;group transfer coenzyme metabolic process;2.50306781245034e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.71679729444201e-05!GO:0015980;energy derivation by oxidation of organic compounds;2.78017322545515e-05!GO:0006974;response to DNA damage stimulus;2.80684813893858e-05!GO:0032446;protein modification by small protein conjugation;2.84191388492245e-05!GO:0051170;nuclear import;3.14608756028002e-05!GO:0016567;protein ubiquitination;3.18257502138048e-05!GO:0030867;rough endoplasmic reticulum membrane;3.25141500037881e-05!GO:0031968;organelle outer membrane;3.34791476115466e-05!GO:0016049;cell growth;3.48931440046688e-05!GO:0050794;regulation of cellular process;3.83395216805017e-05!GO:0043623;cellular protein complex assembly;4.03006151354844e-05!GO:0030036;actin cytoskeleton organization and biogenesis;4.11762309478311e-05!GO:0030133;transport vesicle;4.11762309478311e-05!GO:0006403;RNA localization;4.17811159249274e-05!GO:0016853;isomerase activity;4.51786964202364e-05!GO:0016044;membrane organization and biogenesis;4.60425577746446e-05!GO:0046930;pore complex;4.81296008752213e-05!GO:0008092;cytoskeletal protein binding;4.94600389657902e-05!GO:0006606;protein import into nucleus;4.95917214137884e-05!GO:0019867;outer membrane;5.30167790061902e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.37117788715216e-05!GO:0016070;RNA metabolic process;5.43688936048316e-05!GO:0050657;nucleic acid transport;5.57287426664995e-05!GO:0051236;establishment of RNA localization;5.57287426664995e-05!GO:0050658;RNA transport;5.57287426664995e-05!GO:0030659;cytoplasmic vesicle membrane;6.39057536306924e-05!GO:0006366;transcription from RNA polymerase II promoter;8.36039423366702e-05!GO:0000151;ubiquitin ligase complex;8.90913240223973e-05!GO:0003724;RNA helicase activity;0.000115018606253581!GO:0005048;signal sequence binding;0.000121390477151321!GO:0033116;ER-Golgi intermediate compartment membrane;0.00012709544160707!GO:0044433;cytoplasmic vesicle part;0.000139119828149666!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000142105832900618!GO:0005667;transcription factor complex;0.000144511981813547!GO:0006612;protein targeting to membrane;0.000144565665644518!GO:0001558;regulation of cell growth;0.000154092797571902!GO:0006364;rRNA processing;0.000159078347060552!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000186111336406619!GO:0005741;mitochondrial outer membrane;0.000188544528878183!GO:0016859;cis-trans isomerase activity;0.000196260042364364!GO:0016072;rRNA metabolic process;0.000201372002610149!GO:0030658;transport vesicle membrane;0.000217016852457879!GO:0000245;spliceosome assembly;0.000226738840393574!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000226923637031384!GO:0016779;nucleotidyltransferase activity;0.000235051583378875!GO:0005791;rough endoplasmic reticulum;0.000265472248241244!GO:0009967;positive regulation of signal transduction;0.000278407943028533!GO:0030029;actin filament-based process;0.000285343802999948!GO:0005762;mitochondrial large ribosomal subunit;0.000314006493254784!GO:0000315;organellar large ribosomal subunit;0.000314006493254784!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000341926293050263!GO:0015399;primary active transmembrane transporter activity;0.000341926293050263!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000344704227593455!GO:0048518;positive regulation of biological process;0.00034933895171592!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.000355651118873648!GO:0030118;clathrin coat;0.000355651118873648!GO:0005885;Arp2/3 protein complex;0.000355651118873648!GO:0051427;hormone receptor binding;0.000355713529732276!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000356903913857279!GO:0000278;mitotic cell cycle;0.000357429162896854!GO:0012506;vesicle membrane;0.000378894524777501!GO:0016563;transcription activator activity;0.000385511791605199!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000404611270300506!GO:0001726;ruffle;0.000407895469107942!GO:0008250;oligosaccharyl transferase complex;0.000415211880657727!GO:0006281;DNA repair;0.000422127015918676!GO:0043566;structure-specific DNA binding;0.000430680004744571!GO:0007264;small GTPase mediated signal transduction;0.000483354421520085!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000485617658827526!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000556555125671522!GO:0050789;regulation of biological process;0.00058338353046548!GO:0016126;sterol biosynthetic process;0.000585688863720076!GO:0031324;negative regulation of cellular metabolic process;0.000610541166593368!GO:0004576;oligosaccharyl transferase activity;0.000613378187213662!GO:0043284;biopolymer biosynthetic process;0.000613488541747846!GO:0018196;peptidyl-asparagine modification;0.000617975347917975!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000617975347917975!GO:0035257;nuclear hormone receptor binding;0.000670408165735788!GO:0009719;response to endogenous stimulus;0.000693297762244877!GO:0006323;DNA packaging;0.000693297762244877!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000706007016114417!GO:0051028;mRNA transport;0.000710832801506578!GO:0019899;enzyme binding;0.000714161452356466!GO:0030660;Golgi-associated vesicle membrane;0.000823898958513195!GO:0051920;peroxiredoxin activity;0.000843997757306506!GO:0030663;COPI coated vesicle membrane;0.000854690744589864!GO:0030126;COPI vesicle coat;0.000854690744589864!GO:0009165;nucleotide biosynthetic process;0.00085740082102408!GO:0048471;perinuclear region of cytoplasm;0.000897223616988541!GO:0007010;cytoskeleton organization and biogenesis;0.000897227959968375!GO:0048468;cell development;0.000929225296775111!GO:0046474;glycerophospholipid biosynthetic process;0.000960173172123401!GO:0003697;single-stranded DNA binding;0.000971425248707706!GO:0003713;transcription coactivator activity;0.00100706288164159!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0010260207018011!GO:0043021;ribonucleoprotein binding;0.001034396546561!GO:0030132;clathrin coat of coated pit;0.001034396546561!GO:0016197;endosome transport;0.00112936522589617!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00115210853185143!GO:0016568;chromatin modification;0.0012393124477669!GO:0006891;intra-Golgi vesicle-mediated transport;0.00124395545372716!GO:0015630;microtubule cytoskeleton;0.00126310929434531!GO:0006414;translational elongation;0.00126772009777625!GO:0030176;integral to endoplasmic reticulum membrane;0.0014367890212482!GO:0046489;phosphoinositide biosynthetic process;0.00144090798528388!GO:0007040;lysosome organization and biogenesis;0.00144827923183983!GO:0030119;AP-type membrane coat adaptor complex;0.0014782587617758!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00149880477785195!GO:0008186;RNA-dependent ATPase activity;0.00159168094699358!GO:0030125;clathrin vesicle coat;0.00167439418860331!GO:0030665;clathrin coated vesicle membrane;0.00167439418860331!GO:0019843;rRNA binding;0.00168838889024603!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00172250784153345!GO:0008610;lipid biosynthetic process;0.00175773776008217!GO:0007033;vacuole organization and biogenesis;0.00178128064242564!GO:0051276;chromosome organization and biogenesis;0.0018922422046726!GO:0045045;secretory pathway;0.00192420216351295!GO:0006509;membrane protein ectodomain proteolysis;0.00193816722254777!GO:0033619;membrane protein proteolysis;0.00193816722254777!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00193816722254777!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00193816722254777!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00193816722254777!GO:0065009;regulation of a molecular function;0.00194481173394863!GO:0051168;nuclear export;0.00204049988373144!GO:0009892;negative regulation of metabolic process;0.00204597363088431!GO:0042802;identical protein binding;0.00212090447653905!GO:0030137;COPI-coated vesicle;0.00223177703925313!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00237709370443379!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00237709370443379!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00237709370443379!GO:0006839;mitochondrial transport;0.0024427512366891!GO:0031418;L-ascorbic acid binding;0.00254912140459956!GO:0030131;clathrin adaptor complex;0.00260455490855607!GO:0006897;endocytosis;0.00262773748796115!GO:0010324;membrane invagination;0.00262773748796115!GO:0005813;centrosome;0.00272392579189523!GO:0046467;membrane lipid biosynthetic process;0.00283135919011066!GO:0007050;cell cycle arrest;0.00287021801332266!GO:0031543;peptidyl-proline dioxygenase activity;0.00292115932097557!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0030067870976096!GO:0015992;proton transport;0.00307633940998405!GO:0030027;lamellipodium;0.00315593119161996!GO:0006818;hydrogen transport;0.00318356297028666!GO:0065004;protein-DNA complex assembly;0.00320451366752462!GO:0000314;organellar small ribosomal subunit;0.00324050772682246!GO:0005763;mitochondrial small ribosomal subunit;0.00324050772682246!GO:0031902;late endosome membrane;0.00328285884396538!GO:0030134;ER to Golgi transport vesicle;0.00344153965235003!GO:0031901;early endosome membrane;0.00344271987227886!GO:0046519;sphingoid metabolic process;0.00350457310684691!GO:0003899;DNA-directed RNA polymerase activity;0.00361875116176364!GO:0043681;protein import into mitochondrion;0.00361875116176364!GO:0043492;ATPase activity, coupled to movement of substances;0.00363522149004765!GO:0032940;secretion by cell;0.00378549595326418!GO:0030127;COPII vesicle coat;0.00379665989853762!GO:0012507;ER to Golgi transport vesicle membrane;0.00379665989853762!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00380218254420925!GO:0048487;beta-tubulin binding;0.00383805905296661!GO:0004004;ATP-dependent RNA helicase activity;0.00389404030223132!GO:0003729;mRNA binding;0.00391246177701911!GO:0008243;plasminogen activator activity;0.00401861494754583!GO:0008047;enzyme activator activity;0.00403982293655951!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00405891059257909!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00435248556644581!GO:0017166;vinculin binding;0.00452232447322525!GO:0008632;apoptotic program;0.00455711033297641!GO:0048500;signal recognition particle;0.00479642231310165!GO:0022890;inorganic cation transmembrane transporter activity;0.00483172685677486!GO:0031072;heat shock protein binding;0.0050554319481433!GO:0006979;response to oxidative stress;0.00505977909395172!GO:0007006;mitochondrial membrane organization and biogenesis;0.00555163578892979!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00556916691725287!GO:0006626;protein targeting to mitochondrion;0.0056304054688532!GO:0035258;steroid hormone receptor binding;0.00574432613660253!GO:0019798;procollagen-proline dioxygenase activity;0.00575310946151153!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00592460895236962!GO:0005815;microtubule organizing center;0.00601799487276635!GO:0040008;regulation of growth;0.00629878124664401!GO:0003746;translation elongation factor activity;0.00637842277265422!GO:0008139;nuclear localization sequence binding;0.00637842277265422!GO:0006672;ceramide metabolic process;0.00641057927406726!GO:0006695;cholesterol biosynthetic process;0.0067665957195788!GO:0006650;glycerophospholipid metabolic process;0.00676792456892993!GO:0022406;membrane docking;0.00725493536891693!GO:0048278;vesicle docking;0.00725493536891693!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00725496945923777!GO:0045047;protein targeting to ER;0.00725496945923777!GO:0007030;Golgi organization and biogenesis;0.00735271271581811!GO:0006260;DNA replication;0.00740519418354472!GO:0004177;aminopeptidase activity;0.00789661110668304!GO:0030384;phosphoinositide metabolic process;0.00802523867896103!GO:0006904;vesicle docking during exocytosis;0.00802523867896103!GO:0045792;negative regulation of cell size;0.00828311768837205!GO:0003779;actin binding;0.00831045271742299!GO:0001666;response to hypoxia;0.00918027061567051!GO:0016363;nuclear matrix;0.00925425951294789!GO:0006497;protein amino acid lipidation;0.0093323548721187!GO:0005869;dynactin complex;0.00941625516368362!GO:0006383;transcription from RNA polymerase III promoter;0.00941881884720482!GO:0005975;carbohydrate metabolic process;0.00943707234791726!GO:0030308;negative regulation of cell growth;0.0095058754757751!GO:0051087;chaperone binding;0.00984905516837696!GO:0003711;transcription elongation regulator activity;0.00984905516837696!GO:0006892;post-Golgi vesicle-mediated transport;0.0101019092712466!GO:0043065;positive regulation of apoptosis;0.0105391815488453!GO:0030521;androgen receptor signaling pathway;0.0105904629382394!GO:0016481;negative regulation of transcription;0.0105904629382394!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0106517048295745!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0106517048295745!GO:0000059;protein import into nucleus, docking;0.0109038690864902!GO:0015631;tubulin binding;0.0111296412486964!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0112964445024086!GO:0008312;7S RNA binding;0.0114744579307283!GO:0006333;chromatin assembly or disassembly;0.0117314308897798!GO:0030031;cell projection biogenesis;0.0118618182076046!GO:0043068;positive regulation of programmed cell death;0.0124051811055483!GO:0005862;muscle thin filament tropomyosin;0.0127316749397707!GO:0008180;signalosome;0.0127616050152282!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0129229658544693!GO:0006778;porphyrin metabolic process;0.0131746387110707!GO:0033013;tetrapyrrole metabolic process;0.0131746387110707!GO:0006007;glucose catabolic process;0.0132370727992617!GO:0016860;intramolecular oxidoreductase activity;0.0135101656395242!GO:0003690;double-stranded DNA binding;0.0135101656395242!GO:0005586;collagen type III;0.0135101656395242!GO:0006354;RNA elongation;0.014149852250017!GO:0007242;intracellular signaling cascade;0.0144029314870513!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0146364045787155!GO:0003756;protein disulfide isomerase activity;0.0148977727996628!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0148977727996628!GO:0005774;vacuolar membrane;0.0148977727996628!GO:0051252;regulation of RNA metabolic process;0.0148977727996628!GO:0016408;C-acyltransferase activity;0.0148977727996628!GO:0030032;lamellipodium biogenesis;0.0148977727996628!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0148977727996628!GO:0042158;lipoprotein biosynthetic process;0.0150428571080172!GO:0006595;polyamine metabolic process;0.0152192233073636!GO:0006417;regulation of translation;0.0154488599675629!GO:0042168;heme metabolic process;0.0154488599675629!GO:0016272;prefoldin complex;0.0159436442254543!GO:0050681;androgen receptor binding;0.0163700112607999!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.016393722279577!GO:0015002;heme-copper terminal oxidase activity;0.016393722279577!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.016393722279577!GO:0004129;cytochrome-c oxidase activity;0.016393722279577!GO:0007034;vacuolar transport;0.0164318128305692!GO:0051540;metal cluster binding;0.0181638000393191!GO:0051536;iron-sulfur cluster binding;0.0181638000393191!GO:0030149;sphingolipid catabolic process;0.0183617360108251!GO:0031529;ruffle organization and biogenesis;0.0185349435449186!GO:0048144;fibroblast proliferation;0.0185399241884762!GO:0048145;regulation of fibroblast proliferation;0.0185399241884762!GO:0006402;mRNA catabolic process;0.0192040876818158!GO:0008234;cysteine-type peptidase activity;0.0196547942515558!GO:0051301;cell division;0.0200051615533263!GO:0006506;GPI anchor biosynthetic process;0.0201210869907514!GO:0006740;NADPH regeneration;0.0201806472177106!GO:0006098;pentose-phosphate shunt;0.0201806472177106!GO:0051287;NAD binding;0.0215676083295863!GO:0043433;negative regulation of transcription factor activity;0.0217989460979872!GO:0050662;coenzyme binding;0.0219131650427449!GO:0008320;protein transmembrane transporter activity;0.0223725794027962!GO:0000209;protein polyubiquitination;0.022394542957166!GO:0051329;interphase of mitotic cell cycle;0.0226188734975371!GO:0007021;tubulin folding;0.0226662677609104!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0226905792000617!GO:0005938;cell cortex;0.0227901537568915!GO:0000339;RNA cap binding;0.0231754281771415!GO:0051325;interphase;0.0238774136856558!GO:0004197;cysteine-type endopeptidase activity;0.023972344638991!GO:0046483;heterocycle metabolic process;0.0241796177483796!GO:0051101;regulation of DNA binding;0.0244872139706032!GO:0004287;prolyl oligopeptidase activity;0.024607694899936!GO:0035035;histone acetyltransferase binding;0.0248174118640254!GO:0005694;chromosome;0.025097404152811!GO:0005832;chaperonin-containing T-complex;0.025097404152811!GO:0000902;cell morphogenesis;0.0255260504429336!GO:0032989;cellular structure morphogenesis;0.0255260504429336!GO:0008484;sulfuric ester hydrolase activity;0.0255500068115136!GO:0031301;integral to organelle membrane;0.0256443729433484!GO:0051272;positive regulation of cell motility;0.0259614779924546!GO:0040017;positive regulation of locomotion;0.0259614779924546!GO:0006643;membrane lipid metabolic process;0.0260537845175891!GO:0030145;manganese ion binding;0.0260901704857499!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0270840015613988!GO:0006458;'de novo' protein folding;0.0272163854749843!GO:0051084;'de novo' posttranslational protein folding;0.0272163854749843!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0272320214507521!GO:0050811;GABA receptor binding;0.0275148135935608!GO:0043022;ribosome binding;0.027913596774873!GO:0065007;biological regulation;0.0287325366253691!GO:0004674;protein serine/threonine kinase activity;0.028974429018046!GO:0050790;regulation of catalytic activity;0.0290487434701983!GO:0016301;kinase activity;0.029977513938026!GO:0008022;protein C-terminus binding;0.0300373921144962!GO:0000087;M phase of mitotic cell cycle;0.0302276775934188!GO:0030041;actin filament polymerization;0.0304899554501564!GO:0051059;NF-kappaB binding;0.0307430301454745!GO:0006118;electron transport;0.0310784830834643!GO:0030503;regulation of cell redox homeostasis;0.0312797276650507!GO:0006505;GPI anchor metabolic process;0.0313718996869176!GO:0009966;regulation of signal transduction;0.0313718996869176!GO:0051128;regulation of cellular component organization and biogenesis;0.03198674641455!GO:0043488;regulation of mRNA stability;0.03198674641455!GO:0043487;regulation of RNA stability;0.03198674641455!GO:0006611;protein export from nucleus;0.0321719287214283!GO:0007067;mitosis;0.0323775982108261!GO:0030140;trans-Golgi network transport vesicle;0.0323775982108261!GO:0006769;nicotinamide metabolic process;0.0323775982108261!GO:0005096;GTPase activator activity;0.0324199706400647!GO:0044437;vacuolar part;0.0329382213689231!GO:0008154;actin polymerization and/or depolymerization;0.0331450162785155!GO:0007265;Ras protein signal transduction;0.0338125201319127!GO:0032507;maintenance of cellular protein localization;0.0340874623130055!GO:0030100;regulation of endocytosis;0.0351385147634589!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0351385147634589!GO:0000096;sulfur amino acid metabolic process;0.0351594798983304!GO:0005684;U2-dependent spliceosome;0.0351594798983304!GO:0000785;chromatin;0.0352402284001242!GO:0008538;proteasome activator activity;0.0356854993099728!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0364198716942574!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0364198716942574!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0368005431885329!GO:0006739;NADP metabolic process;0.0368059180862147!GO:0031625;ubiquitin protein ligase binding;0.0372644137419527!GO:0051235;maintenance of localization;0.0379366782975884!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0382302467515335!GO:0006790;sulfur metabolic process;0.0384478648145677!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0384478648145677!GO:0033043;regulation of organelle organization and biogenesis;0.0384478648145677!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0384854445621271!GO:0030433;ER-associated protein catabolic process;0.0384859520938778!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0384859520938778!GO:0048146;positive regulation of fibroblast proliferation;0.0387774805073071!GO:0044427;chromosomal part;0.0389328871912235!GO:0022403;cell cycle phase;0.0392532297618744!GO:0030518;steroid hormone receptor signaling pathway;0.0392877995890875!GO:0031124;mRNA 3'-end processing;0.0395311015513916!GO:0030833;regulation of actin filament polymerization;0.0395929573468965!GO:0033673;negative regulation of kinase activity;0.0396479518850619!GO:0006469;negative regulation of protein kinase activity;0.0396479518850619!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0399274891212808!GO:0005581;collagen;0.0401337466652729!GO:0051270;regulation of cell motility;0.0403137172109046!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0404668168438123!GO:0030880;RNA polymerase complex;0.0405711388122015!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0405909836414291!GO:0006950;response to stress;0.0408029814673373!GO:0060166;olfactory pit development;0.0408029814673373!GO:0021768;nucleus accumbens development;0.0408029814673373!GO:0002072;optic cup morphogenesis involved in camera-type eye development;0.0408029814673373!GO:0003678;DNA helicase activity;0.0410334839516851!GO:0045926;negative regulation of growth;0.0413859118776326!GO:0019318;hexose metabolic process;0.0414904185447639!GO:0006779;porphyrin biosynthetic process;0.043605922153807!GO:0033014;tetrapyrrole biosynthetic process;0.043605922153807!GO:0045334;clathrin-coated endocytic vesicle;0.0441988962178381!GO:0005801;cis-Golgi network;0.0453569406333447!GO:0006378;mRNA polyadenylation;0.0460928752386446!GO:0005765;lysosomal membrane;0.0460928752386446!GO:0006665;sphingolipid metabolic process;0.0463366458330676!GO:0051098;regulation of binding;0.0465696872392586!GO:0022884;macromolecule transmembrane transporter activity;0.0466151484497164!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0466151484497164!GO:0031371;ubiquitin conjugating enzyme complex;0.0470621368502397!GO:0030984;kininogen binding;0.0472421586366465!GO:0004213;cathepsin B activity;0.0472421586366465!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0472633241643031!GO:0016776;phosphotransferase activity, phosphate group as acceptor;0.0472821281299979!GO:0005996;monosaccharide metabolic process;0.0475030323082929!GO:0007041;lysosomal transport;0.0476166881568397!GO:0022408;negative regulation of cell-cell adhesion;0.0480628497380407!GO:0045185;maintenance of protein localization;0.0485516747251268!GO:0008383;manganese superoxide dismutase activity;0.0489523652357933!GO:0001315;age-dependent response to reactive oxygen species;0.0489523652357933!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0491272006735364!GO:0012510;trans-Golgi network transport vesicle membrane;0.0491272006735364!GO:0016125;sterol metabolic process;0.0492722818912062!GO:0006516;glycoprotein catabolic process;0.0494983707773433 | |||
|sample_id=11838 | |sample_id=11838 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=ovary | |sample_tissue=ovary | ||
|top_motifs=NKX3-1:2.54098038969;HOX{A5,B5}:2.07915162204;GZF1:2.02774791077;HIF1A:1.92646499503;TEF:1.91433859337;GLI1..3:1.86843569687;PAX4:1.73404115337;NFE2L1:1.57822248132;UFEwm:1.56682155542;AIRE:1.56154300283;SPZ1:1.3785485476;ZBTB6:1.35859672265;XBP1:1.34498253574;TAL1_TCF{3,4,12}:1.32746585066;HSF1,2:1.30803237636;EVI1:1.21253588213;TEAD1:1.16914011667;POU1F1:1.16854493905;PPARG:1.09591123365;ZIC1..3:1.08528500504;NKX3-2:1.05291206523;HMX1:1.04447810195;SRF:1.04291406661;NKX2-1,4:1.03532666885;ESR1:1.02392195445;ZNF384:0.981719177384;ONECUT1,2:0.969766466978;RXR{A,B,G}:0.965445383462;NR3C1:0.963005815186;ZBTB16:0.956109788292;NR6A1:0.915525121355;GCM1,2:0.897690523656;MYBL2:0.866129342582;ATF6:0.801378318758;EN1,2:0.788954126968;RXRA_VDR{dimer}:0.75448797067;EP300:0.711215688636;TBP:0.696097653711;TLX1..3_NFIC{dimer}:0.695319398872;HES1:0.690485094758;NFATC1..3:0.658251497937;HMGA1,2:0.630684252993;TOPORS:0.629303127834;ZNF238:0.614917215826;POU3F1..4:0.609938333402;TFCP2:0.59638130145;GATA4:0.594117546146;FOXD3:0.573645006984;MTE{core}:0.569686300512;GFI1B:0.559734651124;KLF4:0.555186583212;TBX4,5:0.535025789459;ALX4:0.489259435347;TP53:0.472948707767;XCPE1{core}:0.471210012931;IKZF1:0.465599655492;PRDM1:0.454276990059;MAFB:0.452486935177;NFE2L2:0.430368278316;HOX{A4,D4}:0.383502371451;PAX1,9:0.350807779309;MAZ:0.336282850207;HLF:0.331003141205;GTF2I:0.327736959528;PAX6:0.327168484033;SMAD1..7,9:0.320965400836;BACH2:0.318607843761;HOXA9_MEIS1:0.300089442409;GTF2A1,2:0.285556402453;ZNF148:0.282221682572;FOSL2:0.275245359772;NR1H4:0.245024745785;EBF1:0.237630042046;HIC1:0.204390792545;MZF1:0.187367811171;PAX5:0.186911928122;MYFfamily:0.17703574186;FOS_FOS{B,L1}_JUN{B,D}:0.170255705637;TFAP2B:0.155095718081;FOX{I1,J2}:0.148177050582;FOXL1:0.13971480609;IRF1,2:0.124331029839;CDC5L:0.118556358991;NFE2:0.113216599194;SP1:0.0870176603934;CRX:0.0836998864453;ZNF423:0.082478099722;FOXO1,3,4:0.0770369427902;HOX{A6,A7,B6,B7}:0.0549209016104;ARID5B:0.0327969252868;NFIL3:0.020174259483;LMO2:0.01994861089;REST:0.00242822587486;HNF1A:-0.00343333150598;POU6F1:-0.00612958129177;FOXM1:-0.00669071366189;ALX1:-0.012380612526;DMAP1_NCOR{1,2}_SMARC:-0.0155584254225;PAX2:-0.0353488988135;bHLH_family:-0.0367262853783;LHX3,4:-0.0624741084687;STAT2,4,6:-0.0643310764128;NHLH1,2:-0.0949210955772;TFAP2{A,C}:-0.106725051652;SOX17:-0.114584336676;SREBF1,2:-0.117198326206;IRF7:-0.129336152268;RREB1:-0.138640429925;NKX2-2,8:-0.141624397826;ESRRA:-0.191720152386;AR:-0.203661801679;JUN:-0.223260904939;NFKB1_REL_RELA:-0.22416633941;EGR1..3:-0.232642036447;RFX1:-0.245443553936;SOX2:-0.246905965818;PITX1..3:-0.254159600831;ADNP_IRX_SIX_ZHX:-0.276131184134;HBP1_HMGB_SSRP1_UBTF:-0.292456191318;ZFP161:-0.295487648516;SNAI1..3:-0.331307032145;RUNX1..3:-0.338450953906;NANOG{mouse}:-0.340890508317;PRRX1,2:-0.343314942474;PAX3,7:-0.344679210258;TLX2:-0.345100942163;TFAP4:-0.348108871125;OCT4_SOX2{dimer}:-0.350448974957;FOX{D1,D2}:-0.358599895389;DBP:-0.360361787836;MED-1{core}:-0.360969492318;FOXP1:-0.361947600102;PAX8:-0.372244211153;STAT5{A,B}:-0.37798235419;ELK1,4_GABP{A,B1}:-0.41023237164;ATF2:-0.421334845207;AHR_ARNT_ARNT2:-0.426199041318;HAND1,2:-0.426226994743;ZNF143:-0.42810208785;MTF1:-0.440661859852;FOXN1:-0.464497682137;MYOD1:-0.465571554138;HNF4A_NR2F1,2:-0.490828276827;NRF1:-0.491456777983;MEF2{A,B,C,D}:-0.503499704584;CEBPA,B_DDIT3:-0.511641815242;ETS1,2:-0.518070132622;PATZ1:-0.518771254455;FOXP3:-0.543285869403;SOX5:-0.593955988218;POU5F1:-0.618492405784;GATA6:-0.625750977035;CDX1,2,4:-0.63449012827;IKZF2:-0.680874759247;LEF1_TCF7_TCF7L1,2:-0.682877080368;ATF5_CREB3:-0.685605032625;ZEB1:-0.689097301174;SPI1:-0.711073203459;YY1:-0.721581635006;CUX2:-0.736674900134;TFDP1:-0.738064051257;SPIB:-0.754436693392;BPTF:-0.762332455495;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.762722308023;NKX6-1,2:-0.802754488422;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.811832062754;TGIF1:-0.822285227473;NANOG:-0.824519560633;ELF1,2,4:-0.856833553871;PDX1:-0.857550337421;E2F1..5:-0.890976433781;CREB1:-0.900188363703;NFIX:-0.904117386137;STAT1,3:-0.94550628565;RFX2..5_RFXANK_RFXAP:-0.970993439928;MYB:-1.00920154827;ATF4:-1.07378721524;NR5A1,2:-1.08266347932;FOXQ1:-1.10174374349;PBX1:-1.10283286465;SOX{8,9,10}:-1.10468199026;VSX1,2:-1.15689761279;T:-1.16689884668;NKX2-3_NKX2-5:-1.29114944972;NFY{A,B,C}:-1.3076388871;POU2F1..3:-1.32531112199;RBPJ:-1.40096117864;FOXA2:-1.40234440717;GFI1:-1.45011255718;RORA:-1.50678624516;BREu{core}:-1.62467094767;FOX{F1,F2,J1}:-1.68809999554 | |top_motifs=NKX3-1:2.54098038969;HOX{A5,B5}:2.07915162204;GZF1:2.02774791077;HIF1A:1.92646499503;TEF:1.91433859337;GLI1..3:1.86843569687;PAX4:1.73404115337;NFE2L1:1.57822248132;UFEwm:1.56682155542;AIRE:1.56154300283;SPZ1:1.3785485476;ZBTB6:1.35859672265;XBP1:1.34498253574;TAL1_TCF{3,4,12}:1.32746585066;HSF1,2:1.30803237636;EVI1:1.21253588213;TEAD1:1.16914011667;POU1F1:1.16854493905;PPARG:1.09591123365;ZIC1..3:1.08528500504;NKX3-2:1.05291206523;HMX1:1.04447810195;SRF:1.04291406661;NKX2-1,4:1.03532666885;ESR1:1.02392195445;ZNF384:0.981719177384;ONECUT1,2:0.969766466978;RXR{A,B,G}:0.965445383462;NR3C1:0.963005815186;ZBTB16:0.956109788292;NR6A1:0.915525121355;GCM1,2:0.897690523656;MYBL2:0.866129342582;ATF6:0.801378318758;EN1,2:0.788954126968;RXRA_VDR{dimer}:0.75448797067;EP300:0.711215688636;TBP:0.696097653711;TLX1..3_NFIC{dimer}:0.695319398872;HES1:0.690485094758;NFATC1..3:0.658251497937;HMGA1,2:0.630684252993;TOPORS:0.629303127834;ZNF238:0.614917215826;POU3F1..4:0.609938333402;TFCP2:0.59638130145;GATA4:0.594117546146;FOXD3:0.573645006984;MTE{core}:0.569686300512;GFI1B:0.559734651124;KLF4:0.555186583212;TBX4,5:0.535025789459;ALX4:0.489259435347;TP53:0.472948707767;XCPE1{core}:0.471210012931;IKZF1:0.465599655492;PRDM1:0.454276990059;MAFB:0.452486935177;NFE2L2:0.430368278316;HOX{A4,D4}:0.383502371451;PAX1,9:0.350807779309;MAZ:0.336282850207;HLF:0.331003141205;GTF2I:0.327736959528;PAX6:0.327168484033;SMAD1..7,9:0.320965400836;BACH2:0.318607843761;HOXA9_MEIS1:0.300089442409;GTF2A1,2:0.285556402453;ZNF148:0.282221682572;FOSL2:0.275245359772;NR1H4:0.245024745785;EBF1:0.237630042046;HIC1:0.204390792545;MZF1:0.187367811171;PAX5:0.186911928122;MYFfamily:0.17703574186;FOS_FOS{B,L1}_JUN{B,D}:0.170255705637;TFAP2B:0.155095718081;FOX{I1,J2}:0.148177050582;FOXL1:0.13971480609;IRF1,2:0.124331029839;CDC5L:0.118556358991;NFE2:0.113216599194;SP1:0.0870176603934;CRX:0.0836998864453;ZNF423:0.082478099722;FOXO1,3,4:0.0770369427902;HOX{A6,A7,B6,B7}:0.0549209016104;ARID5B:0.0327969252868;NFIL3:0.020174259483;LMO2:0.01994861089;REST:0.00242822587486;HNF1A:-0.00343333150598;POU6F1:-0.00612958129177;FOXM1:-0.00669071366189;ALX1:-0.012380612526;DMAP1_NCOR{1,2}_SMARC:-0.0155584254225;PAX2:-0.0353488988135;bHLH_family:-0.0367262853783;LHX3,4:-0.0624741084687;STAT2,4,6:-0.0643310764128;NHLH1,2:-0.0949210955772;TFAP2{A,C}:-0.106725051652;SOX17:-0.114584336676;SREBF1,2:-0.117198326206;IRF7:-0.129336152268;RREB1:-0.138640429925;NKX2-2,8:-0.141624397826;ESRRA:-0.191720152386;AR:-0.203661801679;JUN:-0.223260904939;NFKB1_REL_RELA:-0.22416633941;EGR1..3:-0.232642036447;RFX1:-0.245443553936;SOX2:-0.246905965818;PITX1..3:-0.254159600831;ADNP_IRX_SIX_ZHX:-0.276131184134;HBP1_HMGB_SSRP1_UBTF:-0.292456191318;ZFP161:-0.295487648516;SNAI1..3:-0.331307032145;RUNX1..3:-0.338450953906;NANOG{mouse}:-0.340890508317;PRRX1,2:-0.343314942474;PAX3,7:-0.344679210258;TLX2:-0.345100942163;TFAP4:-0.348108871125;OCT4_SOX2{dimer}:-0.350448974957;FOX{D1,D2}:-0.358599895389;DBP:-0.360361787836;MED-1{core}:-0.360969492318;FOXP1:-0.361947600102;PAX8:-0.372244211153;STAT5{A,B}:-0.37798235419;ELK1,4_GABP{A,B1}:-0.41023237164;ATF2:-0.421334845207;AHR_ARNT_ARNT2:-0.426199041318;HAND1,2:-0.426226994743;ZNF143:-0.42810208785;MTF1:-0.440661859852;FOXN1:-0.464497682137;MYOD1:-0.465571554138;HNF4A_NR2F1,2:-0.490828276827;NRF1:-0.491456777983;MEF2{A,B,C,D}:-0.503499704584;CEBPA,B_DDIT3:-0.511641815242;ETS1,2:-0.518070132622;PATZ1:-0.518771254455;FOXP3:-0.543285869403;SOX5:-0.593955988218;POU5F1:-0.618492405784;GATA6:-0.625750977035;CDX1,2,4:-0.63449012827;IKZF2:-0.680874759247;LEF1_TCF7_TCF7L1,2:-0.682877080368;ATF5_CREB3:-0.685605032625;ZEB1:-0.689097301174;SPI1:-0.711073203459;YY1:-0.721581635006;CUX2:-0.736674900134;TFDP1:-0.738064051257;SPIB:-0.754436693392;BPTF:-0.762332455495;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.762722308023;NKX6-1,2:-0.802754488422;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.811832062754;TGIF1:-0.822285227473;NANOG:-0.824519560633;ELF1,2,4:-0.856833553871;PDX1:-0.857550337421;E2F1..5:-0.890976433781;CREB1:-0.900188363703;NFIX:-0.904117386137;STAT1,3:-0.94550628565;RFX2..5_RFXANK_RFXAP:-0.970993439928;MYB:-1.00920154827;ATF4:-1.07378721524;NR5A1,2:-1.08266347932;FOXQ1:-1.10174374349;PBX1:-1.10283286465;SOX{8,9,10}:-1.10468199026;VSX1,2:-1.15689761279;T:-1.16689884668;NKX2-3_NKX2-5:-1.29114944972;NFY{A,B,C}:-1.3076388871;POU2F1..3:-1.32531112199;RBPJ:-1.40096117864;FOXA2:-1.40234440717;GFI1:-1.45011255718;RORA:-1.50678624516;BREu{core}:-1.62467094767;FOX{F1,F2,J1}:-1.68809999554 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11838-124H2;search_select_hide=table117:FF:11838-124H2 | |||
}} | }} | ||
Latest revision as of 18:23, 4 June 2020
| Name: | mesenchymal precursor cell - ovarian cancer metastasis, donor4 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13097 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13097
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13097
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.867 |
| 10 | 10 | 0.461 |
| 100 | 100 | 0.73 |
| 101 | 101 | 0.863 |
| 102 | 102 | 0.523 |
| 103 | 103 | 0.598 |
| 104 | 104 | 0.549 |
| 105 | 105 | 0.0785 |
| 106 | 106 | 0.0168 |
| 107 | 107 | 0.0371 |
| 108 | 108 | 0.0854 |
| 109 | 109 | 0.867 |
| 11 | 11 | 0.369 |
| 110 | 110 | 0.364 |
| 111 | 111 | 0.437 |
| 112 | 112 | 0.253 |
| 113 | 113 | 0.043 |
| 114 | 114 | 0.0558 |
| 115 | 115 | 0.0175 |
| 116 | 116 | 0.159 |
| 117 | 117 | 0.38 |
| 118 | 118 | 0.199 |
| 119 | 119 | 0.827 |
| 12 | 12 | 0.383 |
| 120 | 120 | 0.197 |
| 121 | 121 | 0.909 |
| 122 | 122 | 0.455 |
| 123 | 123 | 0.0868 |
| 124 | 124 | 0.337 |
| 125 | 125 | 0.479 |
| 126 | 126 | 0.694 |
| 127 | 127 | 0.949 |
| 128 | 128 | 0.0996 |
| 129 | 129 | 0.991 |
| 13 | 13 | 0.641 |
| 130 | 130 | 0.108 |
| 131 | 131 | 0.0855 |
| 132 | 132 | 0.294 |
| 133 | 133 | 0.944 |
| 134 | 134 | 0.997 |
| 135 | 135 | 0.189 |
| 136 | 136 | 0.761 |
| 137 | 137 | 0.149 |
| 138 | 138 | 0.505 |
| 139 | 139 | 0.259 |
| 14 | 14 | 0.393 |
| 140 | 140 | 0.47 |
| 141 | 141 | 0.613 |
| 142 | 142 | 0.543 |
| 143 | 143 | 0.919 |
| 144 | 144 | 0.205 |
| 145 | 145 | 0.409 |
| 146 | 146 | 0.301 |
| 147 | 147 | 0.0843 |
| 148 | 148 | 0.525 |
| 149 | 149 | 0.0655 |
| 15 | 15 | 0.521 |
| 150 | 150 | 0.207 |
| 151 | 151 | 0.537 |
| 152 | 152 | 0.0142 |
| 153 | 153 | 0.864 |
| 154 | 154 | 0.662 |
| 155 | 155 | 0.187 |
| 156 | 156 | 0.741 |
| 157 | 157 | 0.886 |
| 158 | 158 | 0.134 |
| 159 | 159 | 0.88 |
| 16 | 16 | 0.0181 |
| 160 | 160 | 0.457 |
| 161 | 161 | 0.998 |
| 162 | 162 | 0.367 |
| 163 | 163 | 0.0138 |
| 164 | 164 | 0.0162 |
| 165 | 165 | 0.528 |
| 166 | 166 | 0.315 |
| 167 | 167 | 0.939 |
| 168 | 168 | 0.166 |
| 169 | 169 | 0.0743 |
| 17 | 17 | 0.273 |
| 18 | 18 | 0.533 |
| 19 | 19 | 0.255 |
| 2 | 2 | 0.493 |
| 20 | 20 | 0.642 |
| 21 | 21 | 0.487 |
| 22 | 22 | 0.463 |
| 23 | 23 | 0.0866 |
| 24 | 24 | 0.835 |
| 25 | 25 | 0.0373 |
| 26 | 26 | 0.657 |
| 27 | 27 | 0.593 |
| 28 | 28 | 0.787 |
| 29 | 29 | 0.307 |
| 3 | 3 | 0.287 |
| 30 | 30 | 0.851 |
| 31 | 31 | 0.795 |
| 32 | 32 | 9.04696e-9 |
| 33 | 33 | 0.889 |
| 34 | 34 | 0.856 |
| 35 | 35 | 0.888 |
| 36 | 36 | 0.0261 |
| 37 | 37 | 0.0186 |
| 38 | 38 | 0.585 |
| 39 | 39 | 0.131 |
| 4 | 4 | 0.235 |
| 40 | 40 | 0.737 |
| 41 | 41 | 0.349 |
| 42 | 42 | 0.41 |
| 43 | 43 | 0.443 |
| 44 | 44 | 0.217 |
| 45 | 45 | 0.979 |
| 46 | 46 | 0.512 |
| 47 | 47 | 0.997 |
| 48 | 48 | 0.796 |
| 49 | 49 | 0.801 |
| 5 | 5 | 0.848 |
| 50 | 50 | 0.937 |
| 51 | 51 | 0.777 |
| 52 | 52 | 0.587 |
| 53 | 53 | 0.114 |
| 54 | 54 | 0.453 |
| 55 | 55 | 0.203 |
| 56 | 56 | 0.848 |
| 57 | 57 | 0.424 |
| 58 | 58 | 0.283 |
| 59 | 59 | 0.365 |
| 6 | 6 | 0.953 |
| 60 | 60 | 0.682 |
| 61 | 61 | 0.287 |
| 62 | 62 | 0.512 |
| 63 | 63 | 0.233 |
| 64 | 64 | 0.639 |
| 65 | 65 | 0.813 |
| 66 | 66 | 0.14 |
| 67 | 67 | 0.476 |
| 68 | 68 | 0.949 |
| 69 | 69 | 0.325 |
| 7 | 7 | 0.135 |
| 70 | 70 | 0.0638 |
| 71 | 71 | 0.32 |
| 72 | 72 | 0.835 |
| 73 | 73 | 0.0122 |
| 74 | 74 | 0.13 |
| 75 | 75 | 0.683 |
| 76 | 76 | 0.443 |
| 77 | 77 | 0.0175 |
| 78 | 78 | 0.619 |
| 79 | 79 | 0.0145 |
| 8 | 8 | 0.0508 |
| 80 | 80 | 0.174 |
| 81 | 81 | 0.425 |
| 82 | 82 | 0.607 |
| 83 | 83 | 0.236 |
| 84 | 84 | 0.764 |
| 85 | 85 | 0.0816 |
| 86 | 86 | 0.777 |
| 87 | 87 | 0.188 |
| 88 | 88 | 0.541 |
| 89 | 89 | 0.0286 |
| 9 | 9 | 0.731 |
| 90 | 90 | 0.432 |
| 91 | 91 | 0.475 |
| 92 | 92 | 0.171 |
| 93 | 93 | 0.892 |
| 94 | 94 | 0.904 |
| 95 | 95 | 0.972 |
| 96 | 96 | 0.744 |
| 97 | 97 | 0.457 |
| 98 | 98 | 0.32 |
| 99 | 99 | 0.0727 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13097
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000274 human mesenchymal precursor cell- ovarian cancer-metastasis sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)
UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000274 (human mesenchymal precursor cell- ovarian cancer-metastasis sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
