FF:11916-125G8: Difference between revisions

Latest revision as of 18:29, 4 June 2020

Name:	CD4+CD25+CD45RA- memory regulatory T cells expanded, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs13811
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	male
age	23
cell type	T cell
cell line	NA
company	NA
collaboration	Michael Rehli (University of Regensberg)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	59-60
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005387

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13811		CAGE		DRX008182		DRR009054

Accession ID Hg19

Library id		BAM		CTSS
CNhs13811		DRZ000479		DRZ001864

Accession ID Hg38

Library id		BAM		CTSS
CNhs13811		DRZ011829		DRZ013214

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0.306
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0299
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0.0151
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.189
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.141
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.121
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.0523
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0.739
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.141
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.0801
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.307
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.129
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.661
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.0646
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0991
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0361
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.0523
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.0991
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0865
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0232
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0.0991
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.951
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.653
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.442
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.5
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0991
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.404
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.464
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.404
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0523
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.19
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.187
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.0523
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.246
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.231
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.0523
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.616
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.849
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.0523
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.0523
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13811

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	2.77628e-5
MA0003.1	MA0003.1	0.897
MA0004.1	MA0004.1	0.848
MA0006.1	MA0006.1	0.737
MA0007.1	MA0007.1	0.839
MA0009.1	MA0009.1	0.349
MA0014.1	MA0014.1	0.944
MA0017.1	MA0017.1	0.0838
MA0018.2	MA0018.2	0.999
MA0019.1	MA0019.1	0.103
MA0024.1	MA0024.1	0.479
MA0025.1	MA0025.1	0.188
MA0027.1	MA0027.1	0.764
MA0028.1	MA0028.1	0.0016
MA0029.1	MA0029.1	0.381
MA0030.1	MA0030.1	0.307
MA0031.1	MA0031.1	0.833
MA0035.2	MA0035.2	0.167
MA0038.1	MA0038.1	0.0278
MA0039.2	MA0039.2	0.941
MA0040.1	MA0040.1	0.339
MA0041.1	MA0041.1	0.237
MA0042.1	MA0042.1	0.47
MA0043.1	MA0043.1	0.131
MA0046.1	MA0046.1	0.071
MA0047.2	MA0047.2	0.899
MA0048.1	MA0048.1	0.89
MA0050.1	MA0050.1	1.8144e-7
MA0051.1	MA0051.1	0.0206
MA0052.1	MA0052.1	0.0095
MA0055.1	MA0055.1	0.865
MA0057.1	MA0057.1	0.866
MA0058.1	MA0058.1	0.756
MA0059.1	MA0059.1	0.373
MA0060.1	MA0060.1	0.24
MA0061.1	MA0061.1	0.00829
MA0062.2	MA0062.2	4.39736e-10
MA0065.2	MA0065.2	0.0296
MA0066.1	MA0066.1	0.295
MA0067.1	MA0067.1	0.578
MA0068.1	MA0068.1	0.385
MA0069.1	MA0069.1	0.683
MA0070.1	MA0070.1	0.46
MA0071.1	MA0071.1	0.464
MA0072.1	MA0072.1	0.691
MA0073.1	MA0073.1	0.832
MA0074.1	MA0074.1	0.864
MA0076.1	MA0076.1	1.83922e-4
MA0077.1	MA0077.1	0.0659
MA0078.1	MA0078.1	0.704
MA0079.2	MA0079.2	0.419
MA0080.2	MA0080.2	5.21874e-10
MA0081.1	MA0081.1	0.0795
MA0083.1	MA0083.1	0.132
MA0084.1	MA0084.1	0.803
MA0087.1	MA0087.1	0.379
MA0088.1	MA0088.1	0.164
MA0090.1	MA0090.1	2.48428e-4
MA0091.1	MA0091.1	0.868
MA0092.1	MA0092.1	0.709
MA0093.1	MA0093.1	0.945
MA0099.2	MA0099.2	7.87188e-4
MA0100.1	MA0100.1	0.854
MA0101.1	MA0101.1	0.544
MA0102.2	MA0102.2	0.255
MA0103.1	MA0103.1	0.0271
MA0104.2	MA0104.2	0.286
MA0105.1	MA0105.1	4.59636e-7
MA0106.1	MA0106.1	0.636
MA0107.1	MA0107.1	0.961
MA0108.2	MA0108.2	2.99292e-11
MA0111.1	MA0111.1	0.0489
MA0112.2	MA0112.2	0.0785
MA0113.1	MA0113.1	0.703
MA0114.1	MA0114.1	0.148
MA0115.1	MA0115.1	0.463
MA0116.1	MA0116.1	1.96678e-6
MA0117.1	MA0117.1	0.801
MA0119.1	MA0119.1	0.903
MA0122.1	MA0122.1	0.94
MA0124.1	MA0124.1	0.37
MA0125.1	MA0125.1	0.364
MA0131.1	MA0131.1	0.457
MA0135.1	MA0135.1	0.0872
MA0136.1	MA0136.1	6.81159e-17
MA0137.2	MA0137.2	0.391
MA0138.2	MA0138.2	0.213
MA0139.1	MA0139.1	0.0246
MA0140.1	MA0140.1	0.386
MA0141.1	MA0141.1	0.443
MA0142.1	MA0142.1	0.629
MA0143.1	MA0143.1	0.168
MA0144.1	MA0144.1	0.383
MA0145.1	MA0145.1	0.861
MA0146.1	MA0146.1	0.0714
MA0147.1	MA0147.1	0.255
MA0148.1	MA0148.1	0.479
MA0149.1	MA0149.1	0.0341
MA0150.1	MA0150.1	0.892
MA0152.1	MA0152.1	0.0386
MA0153.1	MA0153.1	0.0702
MA0154.1	MA0154.1	0.0132
MA0155.1	MA0155.1	0.856
MA0156.1	MA0156.1	1.10357e-11
MA0157.1	MA0157.1	0.413
MA0159.1	MA0159.1	0.227
MA0160.1	MA0160.1	0.419
MA0162.1	MA0162.1	0.518
MA0163.1	MA0163.1	1.36512e-11
MA0164.1	MA0164.1	0.821
MA0258.1	MA0258.1	0.0253
MA0259.1	MA0259.1	0.45

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13811

Novel motif	Logo	P-value
1	1	0.0806
10	10	0.00715
100	100	0.414
101	101	0.0875
102	102	0.455
103	103	0.53
104	104	0.807
105	105	0.333
106	106	0.223
107	107	0.936
108	108	0.864
109	109	0.0359
11	11	0.0183
110	110	0.37
111	111	0.147
112	112	0.111
113	113	0.43
114	114	0.113
115	115	0.616
116	116	0.316
117	117	0.0023
118	118	0.438
119	119	0.316
12	12	0.601
120	120	0.258
121	121	0.563
122	122	0.778
123	123	1.69696e-6
124	124	0.183
125	125	0.954
126	126	0.633
127	127	0.411
128	128	0.564
129	129	0.331
13	13	0.308
130	130	0.649
131	131	0.811
132	132	0.774
133	133	0.131
134	134	0.69
135	135	0.651
136	136	0.692
137	137	0.0832
138	138	0.218
139	139	0.125
14	14	0.274
140	140	0.127
141	141	0.451
142	142	0.7
143	143	0.0109
144	144	0.417
145	145	0.121
146	146	0.771
147	147	0.105
148	148	0.0262
149	149	0.888
15	15	0.233
150	150	0.506
151	151	0.486
152	152	0.716
153	153	0.808
154	154	0.473
155	155	0.0361
156	156	0.616
157	157	0.186
158	158	0.192
159	159	0.77
16	16	0.506
160	160	0.359
161	161	0.0763
162	162	0.327
163	163	0.337
164	164	0.0694
165	165	0.312
166	166	0.84
167	167	0.228
168	168	0.98
169	169	0.108
17	17	0.692
18	18	0.554
19	19	0.751
2	2	0.992
20	20	0.594
21	21	0.166
22	22	0.866
23	23	0.955
24	24	0.857
25	25	0.183
26	26	0.0349
27	27	0.317
28	28	0.561
29	29	0.026
3	3	0.0267
30	30	0.0913
31	31	0.983
32	32	0.704
33	33	0.561
34	34	0.944
35	35	0.28
36	36	0.0141
37	37	0.139
38	38	0.526
39	39	0.759
4	4	0.917
40	40	0.217
41	41	0.692
42	42	0.0865
43	43	0.276
44	44	0.23
45	45	0.481
46	46	0.0588
47	47	0.00938
48	48	0.0324
49	49	0.0871
5	5	0.85
50	50	0.795
51	51	0.667
52	52	0.56
53	53	0.168
54	54	0.705
55	55	0.781
56	56	0.441
57	57	0.136
58	58	0.17
59	59	0.372
6	6	0.419
60	60	0.356
61	61	0.122
62	62	0.0844
63	63	0.36
64	64	0.14
65	65	0.547
66	66	0.779
67	67	0.949
68	68	0.958
69	69	0.798
7	7	0.327
70	70	0.0312
71	71	0.0347
72	72	0.0742
73	73	0.321
74	74	0.555
75	75	0.0258
76	76	0.279
77	77	0.964
78	78	0.044
79	79	0.939
8	8	0.342
80	80	0.304
81	81	0.245
82	82	0.05
83	83	0.56
84	84	0.0484
85	85	0.91
86	86	0.129
87	87	0.513
88	88	0.849
89	89	0.501
9	9	0.957
90	90	0.0601
91	91	0.36
92	92	0.363
93	93	0.459
94	94	0.17
95	95	0.013
96	96	0.0508
97	97	0.232
98	98	0.134
99	99	0.17

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13811

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
+|DRA_sample_Accession=CAGE@SAMD00005387
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000624,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000792,CL:0000815,CL:0000827,CL:0000837,CL:0000838,CL:0000898,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420,CL:0002677
+|accession_numbers=CAGE;DRX008182;DRR009054;DRZ000479;DRZ001864;DRZ011829;DRZ013214
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001
 |comment=Changed from previous label. TODO: full classification
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
+|expression_enrichment_score=chrX:49121165..49121179,-!p1@FOXP3!2.57!373.39!FOXP3;;chr17:37934204..37934241,-!p3@IKZF3!1.83!67.38!IKZF3;;chr17:37934365..37934387,-!p2@IKZF3!1.83!67.38!IKZF3;;chr16:79634624..79634642,-!p1@MAF!1.81!237.61!MAF;;chr16:79634595..79634620,-!p2@MAF!1.77!103.50!MAF;;chr7:50343634..50343717,+!p2@IKZF1!1.77!57.90!IKZF1;;chr10:8096631..8096660,+!p1@GATA3!1.76!68.40!GATA3;;chr10:8096772..8096787,+!p2@GATA3!1.71!59.18!GATA3;;chr2:231090433..231090469,+!p1@SP140!1.71!50.85!SP140;;chr14:75988771..75988826,+!p1@BATF!1.68!61.61!BATF;;chr14:75988831..75988847,+!p2@BATF!1.62!40.99!BATF;;chr3:18486354..18486377,-!p2@SATB1!1.60!47.91!SATB1;;chr20:50159198..50159299,-!p1@NFATC2!1.50!43.94!NFATC2;;chr19:19779619..19779670,+!p1@ZNF101!1.45!73.91!ZNF101;;chr9:117150254..117150271,-!p1@AKNA!1.45!71.99!AKNA;;chrY:21906594..21906622,-!p1@KDM5D!1.43!26.13!KDM5D;;chr1:25256756..25256774,-!p1@RUNX3!1.42!46.63!RUNX3;;chr20:56195474..56195506,-!p1@ZBP1!1.39!23.57!ZBP1;;chr7:50344251..50344288,+!p3@IKZF1!1.38!23.18!IKZF1;;chr2:231090471..231090504,+!p2@SP140!1.38!22.80!SP140;;chr19:16435625..16435682,+!p1@KLF2!1.37!689.39!KLF2;;chr15:60884706..60884743,-!p1@RORA!1.37!113.75!RORA;;chr17:38020392..38020477,-!p1@IKZF3!1.37!22.54!IKZF3;;chr17:37934280..37934299,-!p6@IKZF3!1.35!21.52!IKZF3;;chr6:391743..391759,+!p1@IRF4!1.35!21.39!IRF4;;chr12:56415246..56415286,+!p2@IKZF4!1.35!21.14!IKZF4;;chr7:50348268..50348366,+!p4@IKZF1!1.32!19.85!IKZF1;;chr3:18480217..18480239,-!p3@SATB1!1.31!19.60!SATB1;;chr7:50343895..50343936,+!p5@IKZF1!1.29!18.57!IKZF1;;chr2:192015750..192015793,-!p2@STAT4!1.28!24.34!STAT4;;chr10:35484053..35484076,+!p1@CREM!1.26!42.27!CREM;;chr16:68119324..68119364,+!p1@NFATC3!1.23!69.81!NFATC3;;chr19:19729477..19729542,-!p1@PBX4!1.23!33.82!PBX4;;chr6:106546808..106546833,+!p3@PRDM1!1.23!20.24!PRDM1;;chr16:88752861..88752884,-!p2@SNAI3!1.23!16.01!SNAI3;;chr16:88752889..88752921,-!p1@SNAI3!1.22!18.19!SNAI3;;chr14:99738138..99738163,-!p1@BCL11B!1.22!15.63!BCL11B;;chr17:38020557..38020572,-!p4@IKZF3!1.21!15.24!IKZF3;;chr1:23857698..23857733,-!p1@E2F2!1.20!26.90!E2F2;;chr20:56195525..56195556,-!p2@ZBP1!1.20!14.86!ZBP1;;chr17:37934188..37934202,-!p8@IKZF3!1.19!14.60!IKZF3;;chr16:79634581..79634592,-!p4@MAF!1.19!14.35!MAF;;chr19:36204309..36204335,+!p1@ZBTB32!1.19!14.35!ZBTB32;;chr2:192015701..192015743,-!p1@STAT4!1.18!19.60!STAT4;;chr1:92951607..92951661,-!p1@GFI1!1.18!14.22!GFI1;;chr17:38020516..38020544,-!p5@IKZF3!1.18!14.09!IKZF3;;chr3:63953435..63953499,+!p1@ATXN7!1.18!14.09!ATXN7;;chr16:79633894..79633954,-!p3@MAF!1.16!25.75!MAF;;chr7:137620650..137620677,-!p3@CREB3L2!1.16!13.32!CREB3L2;;chr19:19779686..19779697,+!p3@ZNF101!1.15!15.37!ZNF101;;chr3:12330560..12330579,+!p1@PPARG!1.15!15.11!PPARG;;chr7:50344289..50344323,+!p1@IKZF1!1.13!12.42!IKZF1;;chr3:141105705..141105770,+!p4@ZBTB38!1.12!14.99!ZBTB38;;chr17:45810594..45810608,+!p1@TBX21!1.12!12.04!TBX21;;chr13:41593425..41593480,-!p1@ELF1!1.10!73.91!ELF1;;chr11:47236584..47236679,+!p1@DDB2!1.05!112.98!DDB2;;chr7:77428066..77428132,+!p2@PHTF2!1.03!63.92!PHTF2;;chr10:8095593..8095625,+!p3@GATA3!1.03!11.53!GATA3;;chr12:56415287..56415300,+!p5@IKZF4!1.03!9.73!IKZF4;;chr6:106546731..106546755,+!p5@PRDM1!1.03!9.61!PRDM1;;chr21:36421535..36421610,-!p2@RUNX1!1.01!33.69!RUNX1;;chr4:81104895..81104920,+!p2@PRDM8!0.99!13.19!PRDM8;;chr14:99738059..99738086,-!p2@BCL11B!0.98!8.58!BCL11B;;chr6:106547079..106547114,+!p9@PRDM1!0.97!8.33!PRDM1;;chr3:71355163..71355209,-!p5@FOXP1!0.95!11.02!FOXP1;;chr2:97202991..97203043,+!p3@ARID5A!0.95!7.81!ARID5A;;chr8:60031619..60031676,-!p1@TOX!0.94!17.29!TOX;;chr2:242556880..242556899,-!p5@THAP4!0.94!7.69!THAP4;;chr6:106546834..106546850,+!p4@PRDM1!0.93!7.56!PRDM1;;chr7:137620684..137620711,-!p4@CREB3L2!0.91!7.05!CREB3L2;;chr19:42636586..42636607,-!p1@POU2F2!0.90!19.98!POU2F2;;chr3:48282587..48282603,+!p1@ZNF589!0.89!31.77!ZNF589;;chr17:56565257..56565283,-!p2@HSF5!0.89!6.79!HSF5;;chr7:50343864..50343888,+!p7@IKZF1!0.89!6.79!IKZF1;;chr11:128563948..128564003,+!p1@FLI1!0.88!83.77!FLI1;;chr17:1959369..1959388,+!p2@HIC1!0.88!18.06!HIC1;;chr4:185395633..185395651,-!p2@IRF2!0.88!10.76!IRF2;;chrY:2803415..2803468,+!p1@ZFY!0.87!6.40!ZFY;;chr11:128392085..128392232,-!p1@ETS1!0.86!221.85!ETS1;;chr10:35484804..35484902,+!p2@CREM!0.86!25.23!CREM;;chr6:15249128..15249177,+!p4@JARID2!0.86!11.53!JARID2;;chr6:106546786..106546802,+!p6@PRDM1!0.86!6.28!PRDM1;;chr7:50344144..50344157,+!p6@IKZF1!0.86!6.28!IKZF1;;chr9:20621927..20621996,-!p3@MLLT3!0.85!10.50!MLLT3;;chr14:99737850..99737852,-!p3@BCL11B!0.84!5.89!BCL11B;;chr5:131826457..131826514,-!p1@IRF1!0.83!244.14!IRF1;;chr3:18480173..18480189,-!p6@SATB1!0.83!5.76!SATB1;;chr19:16435735..16435773,+!p4@KLF2!0.83!5.76!KLF2;;chr10:104154246..104154347,+!p3@NFKB2!0.81!35.87!NFKB2;;chr10:8097321..8097348,+!p4@GATA3!0.81!5.51!GATA3;;chr1:151798546..151798590,-!p2@RORC!0.80!5.38!RORC;;chr4:57522674..57522699,-!p5@HOPX!0.80!5.25!HOPX;;chr2:238600933..238600985,+!p3@LRRFIP1!0.79!30.61!LRRFIP1;;chr9:20622444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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000624;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 34: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%2520expanded%252c%2520donor2.CNhs13811.11916-125G8.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%2520expanded%252c%2520donor2.CNhs13811.11916-125G8.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%2520expanded%252c%2520donor2.CNhs13811.11916-125G8.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%2520expanded%252c%2520donor2.CNhs13811.11916-125G8.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%2520expanded%252c%2520donor2.CNhs13811.11916-125G8.hg38.nobarcode.ctss.bed.gz
 |id=FF:11916-125G8
 |is_a=EFO:0002091;;FF:0000002;;FF:0000210
+|is_obsolete=
+|library_id=CNhs13811
+|library_id_phase_based=2:CNhs13811
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11916
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11916
 |name=CD4+CD25+CD45RA- memory regulatory T cells expanded, donor2
 |namespace=
@@ Line 43: / Line 62: @@
 |profile_rnaseq=
 |profile_srnaseq=
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 |rna_box=125
 |rna_catalog_number=
@@ Line 56: / Line 78: @@
 |rna_weight_ug=6.3956
 |sample_age=23
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 68: / Line 91: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.72616876404556e-232!GO:0043227;membrane-bound organelle;7.64613075627999e-201!GO:0043231;intracellular membrane-bound organelle;1.59481811719884e-200!GO:0043226;organelle;1.38641791367283e-188!GO:0043229;intracellular organelle;5.60517233019098e-188!GO:0005737;cytoplasm;8.1340561383435e-159!GO:0044422;organelle part;4.35673551339393e-135!GO:0044446;intracellular organelle part;2.21261728439804e-133!GO:0044444;cytoplasmic part;8.79703294544519e-112!GO:0032991;macromolecular complex;2.88161666572645e-103!GO:0044237;cellular metabolic process;4.95440380371253e-96!GO:0043170;macromolecule metabolic process;1.16578334701566e-94!GO:0005634;nucleus;1.16578334701566e-94!GO:0044238;primary metabolic process;8.48602318048166e-93!GO:0030529;ribonucleoprotein complex;5.32943959702085e-86!GO:0044428;nuclear part;3.28096183162264e-77!GO:0003723;RNA binding;1.41577025573098e-74!GO:0043233;organelle lumen;3.47196397974467e-67!GO:0031974;membrane-enclosed lumen;3.47196397974467e-67!GO:0005515;protein binding;1.54897684340278e-63!GO:0005739;mitochondrion;1.60471403780324e-63!GO:0043283;biopolymer metabolic process;4.42812511684248e-61!GO:0006412;translation;7.03178407915302e-56!GO:0019538;protein metabolic process;8.03282704640672e-54!GO:0043234;protein complex;3.11525201708195e-53!GO:0044267;cellular protein metabolic process;8.54250751377306e-51!GO:0044260;cellular macromolecule metabolic process;1.47152187120936e-49!GO:0005840;ribosome;1.80946651024876e-49!GO:0006396;RNA processing;2.22074673435923e-49!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.75822152924944e-48!GO:0033036;macromolecule localization;9.01295182934909e-48!GO:0010467;gene expression;1.84139333419425e-47!GO:0015031;protein transport;5.85014171997067e-47!GO:0045184;establishment of protein localization;3.02512926507296e-45!GO:0008104;protein localization;1.32038887960062e-44!GO:0031981;nuclear lumen;1.70701746725728e-44!GO:0044429;mitochondrial part;2.77061624261498e-44!GO:0031090;organelle membrane;3.83434795769458e-44!GO:0003735;structural constituent of ribosome;3.9030816439697e-44!GO:0016071;mRNA metabolic process;3.28272605361339e-43!GO:0009059;macromolecule biosynthetic process;9.50001801652655e-43!GO:0031967;organelle envelope;2.27659607520105e-42!GO:0031975;envelope;5.49024454329336e-42!GO:0006259;DNA metabolic process;9.56950519371076e-40!GO:0033279;ribosomal subunit;7.25974241343794e-39!GO:0006397;mRNA processing;9.11088618400046e-37!GO:0008380;RNA splicing;1.26374540859845e-36!GO:0005829;cytosol;3.98897322440214e-36!GO:0046907;intracellular transport;4.35623856005855e-36!GO:0016043;cellular component organization and biogenesis;1.61373200408172e-35!GO:0044249;cellular biosynthetic process;3.91900715561242e-35!GO:0009058;biosynthetic process;4.39274277687283e-35!GO:0006886;intracellular protein transport;3.35013759696351e-33!GO:0065003;macromolecular complex assembly;4.56675026062285e-33!GO:0003676;nucleic acid binding;3.09962389648716e-31!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.60750203476319e-29!GO:0006996;organelle organization and biogenesis;1.89022565222349e-29!GO:0022607;cellular component assembly;3.33458536794897e-29!GO:0005740;mitochondrial envelope;5.33081390994642e-29!GO:0000166;nucleotide binding;9.93708340661302e-29!GO:0005654;nucleoplasm;1.00693816054275e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.26295751869681e-28!GO:0031966;mitochondrial membrane;9.0854253979265e-28!GO:0005681;spliceosome;9.96441556642625e-28!GO:0019866;organelle inner membrane;2.02296987530625e-27!GO:0043228;non-membrane-bound organelle;7.52503786204726e-27!GO:0043232;intracellular non-membrane-bound organelle;7.52503786204726e-27!GO:0006915;apoptosis;7.78792044481715e-27!GO:0012501;programmed cell death;8.04942057314868e-27!GO:0051641;cellular localization;2.0205042544184e-26!GO:0007049;cell cycle;2.49605294720592e-26!GO:0051649;establishment of cellular localization;2.89239823879693e-26!GO:0044445;cytosolic part;1.47130161328829e-25!GO:0008219;cell death;1.63187948771785e-25!GO:0016265;death;1.63187948771785e-25!GO:0005743;mitochondrial inner membrane;1.09719072984772e-24!GO:0005694;chromosome;7.80995681194692e-23!GO:0006512;ubiquitin cycle;8.12791756104064e-23!GO:0006974;response to DNA damage stimulus;1.45718366317806e-22!GO:0006119;oxidative phosphorylation;1.86332649252566e-22!GO:0016070;RNA metabolic process;6.71627313768938e-22!GO:0044451;nucleoplasm part;7.97937354554747e-22!GO:0032553;ribonucleotide binding;8.1251578728362e-22!GO:0032555;purine ribonucleotide binding;8.1251578728362e-22!GO:0017076;purine nucleotide binding;2.36923568428548e-21!GO:0044427;chromosomal part;2.39356312914e-21!GO:0043412;biopolymer modification;4.7181108249354e-21!GO:0022402;cell cycle process;4.93644267644045e-21!GO:0015935;small ribosomal subunit;2.22676449285139e-20!GO:0051276;chromosome organization and biogenesis;2.24403089986914e-20!GO:0005524;ATP binding;2.96084470163169e-20!GO:0044455;mitochondrial membrane part;3.34298644223238e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.96033102655115e-20!GO:0016462;pyrophosphatase activity;5.14934424720023e-20!GO:0022618;protein-RNA complex assembly;6.25986641290814e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;6.69547625297224e-20!GO:0044265;cellular macromolecule catabolic process;8.44015641184567e-20!GO:0017111;nucleoside-triphosphatase activity;9.65153143775395e-20!GO:0015934;large ribosomal subunit;1.18559344680559e-19!GO:0032559;adenyl ribonucleotide binding;2.70103180012916e-19!GO:0042981;regulation of apoptosis;8.92687246193854e-19!GO:0006464;protein modification process;9.81529861206709e-19!GO:0031980;mitochondrial lumen;9.81529861206709e-19!GO:0005759;mitochondrial matrix;9.81529861206709e-19!GO:0016874;ligase activity;1.11839661296035e-18!GO:0030554;adenyl nucleotide binding;1.20217579510248e-18!GO:0006281;DNA repair;1.36283338852153e-18!GO:0043067;regulation of programmed cell death;1.64168435705724e-18!GO:0043687;post-translational protein modification;3.00154457227226e-17!GO:0006325;establishment and/or maintenance of chromatin architecture;3.54660335363884e-17!GO:0000278;mitotic cell cycle;4.33517108999487e-17!GO:0006605;protein targeting;4.68341019560878e-17!GO:0012505;endomembrane system;4.90793928432295e-17!GO:0005746;mitochondrial respiratory chain;6.54600816542436e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;6.54600816542436e-17!GO:0019941;modification-dependent protein catabolic process;6.54940189824935e-17!GO:0043632;modification-dependent macromolecule catabolic process;6.54940189824935e-17!GO:0006511;ubiquitin-dependent protein catabolic process;1.39365816305893e-16!GO:0044257;cellular protein catabolic process;1.80107284679056e-16!GO:0006323;DNA packaging;2.03421189673718e-16!GO:0043285;biopolymer catabolic process;2.0677321853587e-16!GO:0005730;nucleolus;2.2137754769755e-16!GO:0008135;translation factor activity, nucleic acid binding;2.43448329074879e-16!GO:0000502;proteasome complex (sensu Eukaryota);2.6231782566652e-16!GO:0008134;transcription factor binding;5.45729433795306e-16!GO:0009057;macromolecule catabolic process;7.37236326099973e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.18837981031313e-15!GO:0003954;NADH dehydrogenase activity;1.18837981031313e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.18837981031313e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.38740817042986e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.41835277893884e-15!GO:0006457;protein folding;2.20561736215451e-15!GO:0006913;nucleocytoplasmic transport;2.25025950560909e-15!GO:0016887;ATPase activity;3.99648822393127e-15!GO:0042623;ATPase activity, coupled;4.34485647058379e-15!GO:0051169;nuclear transport;4.89064112124369e-15!GO:0009719;response to endogenous stimulus;2.18837494604995e-14!GO:0022403;cell cycle phase;2.7059973135983e-14!GO:0016604;nuclear body;3.65843059863181e-14!GO:0005635;nuclear envelope;3.74898687237829e-14!GO:0000785;chromatin;3.90832987967272e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.60341984675891e-14!GO:0042775;organelle ATP synthesis coupled electron transport;7.31333224675752e-14!GO:0042773;ATP synthesis coupled electron transport;7.31333224675752e-14!GO:0065004;protein-DNA complex assembly;7.78486695801863e-14!GO:0000087;M phase of mitotic cell cycle;7.92763905387678e-14!GO:0044248;cellular catabolic process;8.55938914348752e-14!GO:0030964;NADH dehydrogenase complex (quinone);1.26519836143891e-13!GO:0045271;respiratory chain complex I;1.26519836143891e-13!GO:0005747;mitochondrial respiratory chain complex I;1.26519836143891e-13!GO:0005761;mitochondrial ribosome;1.41386325348405e-13!GO:0000313;organellar ribosome;1.41386325348405e-13!GO:0007067;mitosis;1.52579704195348e-13!GO:0006333;chromatin assembly or disassembly;1.64256728829398e-13!GO:0048770;pigment granule;1.84679386352721e-13!GO:0042470;melanosome;1.84679386352721e-13!GO:0051726;regulation of cell cycle;2.13033578546755e-13!GO:0003743;translation initiation factor activity;2.37509008567433e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;2.49935382130239e-13!GO:0000375;RNA splicing, via transesterification reactions;2.49935382130239e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.49935382130239e-13!GO:0000074;regulation of progression through cell cycle;3.65765842421086e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.16637594893878e-13!GO:0006413;translational initiation;5.70896607122686e-13!GO:0031965;nuclear membrane;5.81597271243677e-13!GO:0006793;phosphorus metabolic process;6.38971999448687e-13!GO:0006796;phosphate metabolic process;6.38971999448687e-13!GO:0030163;protein catabolic process;8.28050991971508e-13!GO:0000279;M phase;7.61546954696484e-12!GO:0051186;cofactor metabolic process;9.07399591453e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.48379768700931e-12!GO:0051301;cell division;1.06280345101715e-11!GO:0044453;nuclear membrane part;1.2586219325191e-11!GO:0050794;regulation of cellular process;1.2586219325191e-11!GO:0005794;Golgi apparatus;1.29015798852521e-11!GO:0048193;Golgi vesicle transport;2.00646153036253e-11!GO:0006260;DNA replication;3.43394451111507e-11!GO:0017038;protein import;3.70968870734724e-11!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.63288909097266e-11!GO:0051082;unfolded protein binding;4.64283979948933e-11!GO:0004386;helicase activity;5.33951249757224e-11!GO:0016310;phosphorylation;6.73252331817535e-11!GO:0006446;regulation of translational initiation;7.15457460411786e-11!GO:0006334;nucleosome assembly;8.11443579419355e-11!GO:0042254;ribosome biogenesis and assembly;8.73581828688813e-11!GO:0016607;nuclear speck;9.33608018835992e-11!GO:0008639;small protein conjugating enzyme activity;1.02554805895278e-10!GO:0005783;endoplasmic reticulum;1.13378164046349e-10!GO:0031497;chromatin assembly;2.31294774074312e-10!GO:0004842;ubiquitin-protein ligase activity;2.47398733991768e-10!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.54089326527227e-10!GO:0019787;small conjugating protein ligase activity;2.96457962562647e-10!GO:0051246;regulation of protein metabolic process;3.02391894766351e-10!GO:0016568;chromatin modification;3.58855247839137e-10!GO:0044432;endoplasmic reticulum part;4.51296569481754e-10!GO:0043069;negative regulation of programmed cell death;5.00532408259799e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.05048016441224e-10!GO:0007243;protein kinase cascade;6.03048132223871e-10!GO:0043066;negative regulation of apoptosis;7.20420556442451e-10!GO:0006916;anti-apoptosis;9.55001776950245e-10!GO:0005643;nuclear pore;9.84423570333641e-10!GO:0008026;ATP-dependent helicase activity;1.42611187321293e-09!GO:0019829;cation-transporting ATPase activity;1.8605309593064e-09!GO:0016787;hydrolase activity;1.99147618214881e-09!GO:0043566;structure-specific DNA binding;2.29305429507897e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.36308130816901e-09!GO:0003712;transcription cofactor activity;2.9103705357255e-09!GO:0006732;coenzyme metabolic process;3.36723294787513e-09!GO:0008565;protein transporter activity;4.08079491728256e-09!GO:0009259;ribonucleotide metabolic process;4.74324367964552e-09!GO:0016740;transferase activity;4.88940814351912e-09!GO:0016192;vesicle-mediated transport;6.1989880469053e-09!GO:0005768;endosome;7.32014632249676e-09!GO:0006917;induction of apoptosis;8.0985019988898e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.16420702540135e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.25335845540476e-09!GO:0043065;positive regulation of apoptosis;1.00966863420232e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.24296224772057e-08!GO:0050657;nucleic acid transport;1.24296224772057e-08!GO:0051236;establishment of RNA localization;1.24296224772057e-08!GO:0050658;RNA transport;1.24296224772057e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.24817542217653e-08!GO:0006399;tRNA metabolic process;1.331107964367e-08!GO:0006164;purine nucleotide biosynthetic process;1.37769768107408e-08!GO:0048523;negative regulation of cellular process;1.38634840374279e-08!GO:0051170;nuclear import;1.39318969228163e-08!GO:0012502;induction of programmed cell death;1.39318969228163e-08!GO:0006163;purine nucleotide metabolic process;1.45198187970729e-08!GO:0006403;RNA localization;1.54775890761633e-08!GO:0043068;positive regulation of programmed cell death;1.58985902829059e-08!GO:0009260;ribonucleotide biosynthetic process;1.68751094448883e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.06880217446477e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.10713894954855e-08!GO:0009055;electron carrier activity;2.17648505230238e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.2149673637058e-08!GO:0006606;protein import into nucleus;2.41825608888956e-08!GO:0003697;single-stranded DNA binding;2.49641727310654e-08!GO:0005789;endoplasmic reticulum membrane;2.50509589650715e-08!GO:0065002;intracellular protein transport across a membrane;2.68417208945747e-08!GO:0016881;acid-amino acid ligase activity;2.72349273034571e-08!GO:0046930;pore complex;2.91520583005444e-08!GO:0065009;regulation of a molecular function;3.14805600167519e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.30698657608231e-08!GO:0009150;purine ribonucleotide metabolic process;3.6896647994883e-08!GO:0015986;ATP synthesis coupled proton transport;4.27171482661424e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.27171482661424e-08!GO:0030532;small nuclear ribonucleoprotein complex;5.79418944993845e-08!GO:0000786;nucleosome;7.96884616824125e-08!GO:0004298;threonine endopeptidase activity;8.09755419890148e-08!GO:0051188;cofactor biosynthetic process;1.6768643443278e-07!GO:0048519;negative regulation of biological process;2.0996991094184e-07!GO:0032446;protein modification by small protein conjugation;3.16259676880025e-07!GO:0016779;nucleotidyltransferase activity;3.16532260103822e-07!GO:0016072;rRNA metabolic process;3.18011398722688e-07!GO:0009056;catabolic process;3.18939053572522e-07!GO:0007242;intracellular signaling cascade;3.30870501096471e-07!GO:0051028;mRNA transport;3.3988936707152e-07!GO:0009060;aerobic respiration;3.46539847195668e-07!GO:0006754;ATP biosynthetic process;3.5859771717703e-07!GO:0006753;nucleoside phosphate metabolic process;3.5859771717703e-07!GO:0006364;rRNA processing;3.69711829138237e-07!GO:0050789;regulation of biological process;3.70559699728801e-07!GO:0006366;transcription from RNA polymerase II promoter;4.14602400024419e-07!GO:0005773;vacuole;4.68626196221532e-07!GO:0009142;nucleoside triphosphate biosynthetic process;4.84670953032088e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.84670953032088e-07!GO:0008632;apoptotic program;4.87209255930958e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.90588386251863e-07!GO:0048522;positive regulation of cellular process;5.34536066982762e-07!GO:0007005;mitochondrion organization and biogenesis;6.41048884751891e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.43061389933985e-07!GO:0004812;aminoacyl-tRNA ligase activity;6.43061389933985e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.43061389933985e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.63257983568342e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.63257983568342e-07!GO:0016567;protein ubiquitination;7.30247579041027e-07!GO:0019222;regulation of metabolic process;8.23414773587967e-07!GO:0048475;coated membrane;9.14235316853503e-07!GO:0030117;membrane coat;9.14235316853503e-07!GO:0009199;ribonucleoside triphosphate metabolic process;9.86940138978595e-07!GO:0009141;nucleoside triphosphate metabolic process;1.05389555708095e-06!GO:0000323;lytic vacuole;1.17167674947752e-06!GO:0005764;lysosome;1.17167674947752e-06!GO:0046034;ATP metabolic process;1.26813112718586e-06!GO:0030120;vesicle coat;1.31482502182277e-06!GO:0030662;coated vesicle membrane;1.31482502182277e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.32354089287759e-06!GO:0043038;amino acid activation;1.33876761973817e-06!GO:0006418;tRNA aminoacylation for protein translation;1.33876761973817e-06!GO:0043039;tRNA aminoacylation;1.33876761973817e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.34574086333374e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.34574086333374e-06!GO:0000245;spliceosome assembly;1.59497455623698e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.6263832901507e-06!GO:0015399;primary active transmembrane transporter activity;1.6263832901507e-06!GO:0019899;enzyme binding;1.70084964991217e-06!GO:0006461;protein complex assembly;1.74110328971203e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.80342316561357e-06!GO:0045259;proton-transporting ATP synthase complex;1.8684097995573e-06!GO:0005793;ER-Golgi intermediate compartment;2.21229150455993e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.59348319306745e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.75336913206549e-06!GO:0045786;negative regulation of progression through cell cycle;2.97425293082227e-06!GO:0004674;protein serine/threonine kinase activity;3.04394594516e-06!GO:0045333;cellular respiration;3.13065745652982e-06!GO:0003713;transcription coactivator activity;3.19344091395664e-06!GO:0005813;centrosome;4.30164899232928e-06!GO:0016563;transcription activator activity;4.5417391190313e-06!GO:0031324;negative regulation of cellular metabolic process;5.81270334373589e-06!GO:0000151;ubiquitin ligase complex;7.77434952322298e-06!GO:0005815;microtubule organizing center;7.94236876803069e-06!GO:0009108;coenzyme biosynthetic process;8.6967088138324e-06!GO:0006261;DNA-dependent DNA replication;8.6967088138324e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.38768927629274e-06!GO:0006613;cotranslational protein targeting to membrane;9.59100366382437e-06!GO:0015630;microtubule cytoskeleton;1.03328385591261e-05!GO:0006752;group transfer coenzyme metabolic process;1.19289570164719e-05!GO:0016564;transcription repressor activity;1.30527634570115e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.3200786394997e-05!GO:0005819;spindle;1.33124587704228e-05!GO:0005762;mitochondrial large ribosomal subunit;1.43995011229386e-05!GO:0000315;organellar large ribosomal subunit;1.43995011229386e-05!GO:0051168;nuclear export;1.50237833765309e-05!GO:0006099;tricarboxylic acid cycle;1.50237833765309e-05!GO:0046356;acetyl-CoA catabolic process;1.50237833765309e-05!GO:0006401;RNA catabolic process;1.50629648705767e-05!GO:0044431;Golgi apparatus part;1.55123211876687e-05!GO:0006310;DNA recombination;1.66866050535705e-05!GO:0006417;regulation of translation;1.88672825794184e-05!GO:0042110;T cell activation;2.26696642621175e-05!GO:0003724;RNA helicase activity;2.33121951706873e-05!GO:0000775;chromosome, pericentric region;2.59221240148231e-05!GO:0043492;ATPase activity, coupled to movement of substances;3.03888787434475e-05!GO:0044440;endosomal part;3.49133224671929e-05!GO:0010008;endosome membrane;3.49133224671929e-05!GO:0006084;acetyl-CoA metabolic process;3.52232031517823e-05!GO:0031323;regulation of cellular metabolic process;3.60066368107618e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;3.73102447578e-05!GO:0009892;negative regulation of metabolic process;3.73102447578e-05!GO:0000075;cell cycle checkpoint;3.73106997366176e-05!GO:0003690;double-stranded DNA binding;4.23499236046311e-05!GO:0005798;Golgi-associated vesicle;4.99197016053131e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;5.28327739519819e-05!GO:0006402;mRNA catabolic process;5.33529822364146e-05!GO:0005770;late endosome;5.44057375257189e-05!GO:0051329;interphase of mitotic cell cycle;5.67290342023207e-05!GO:0043623;cellular protein complex assembly;6.28740707236195e-05!GO:0050790;regulation of catalytic activity;6.55581228998321e-05!GO:0006612;protein targeting to membrane;7.01635723699528e-05!GO:0048518;positive regulation of biological process;7.56141973553872e-05!GO:0051325;interphase;7.75398608816655e-05!GO:0005657;replication fork;8.60130780574217e-05!GO:0009117;nucleotide metabolic process;8.60130780574217e-05!GO:0015992;proton transport;9.74777781461312e-05!GO:0009967;positive regulation of signal transduction;9.98949546600635e-05!GO:0005525;GTP binding;0.00010218289065378!GO:0006818;hydrogen transport;0.000104210167412781!GO:0051187;cofactor catabolic process;0.000106162342950442!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000121781707206072!GO:0009109;coenzyme catabolic process;0.000123016487919946!GO:0009615;response to virus;0.00013042312905753!GO:0007088;regulation of mitosis;0.000135933737415319!GO:0005885;Arp2/3 protein complex;0.000158780883289343!GO:0065007;biological regulation;0.000167559288667517!GO:0031326;regulation of cellular biosynthetic process;0.000168359847763095!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000185035379743069!GO:0016363;nuclear matrix;0.000224823512336681!GO:0003899;DNA-directed RNA polymerase activity;0.000237471311429018!GO:0008654;phospholipid biosynthetic process;0.000247636364343625!GO:0051427;hormone receptor binding;0.000263463462615234!GO:0005667;transcription factor complex;0.000265494597309339!GO:0030384;phosphoinositide metabolic process;0.000314001903097308!GO:0006352;transcription initiation;0.000332762563772005!GO:0008234;cysteine-type peptidase activity;0.00033824510615351!GO:0048468;cell development;0.000352270073762069!GO:0000314;organellar small ribosomal subunit;0.000358019435256665!GO:0005763;mitochondrial small ribosomal subunit;0.000358019435256665!GO:0008186;RNA-dependent ATPase activity;0.000385552026363653!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000428062626144112!GO:0003684;damaged DNA binding;0.000436032089146328!GO:0003924;GTPase activity;0.000441347896246042!GO:0043021;ribonucleoprotein binding;0.000454306925606088!GO:0008094;DNA-dependent ATPase activity;0.000457221086132134!GO:0006350;transcription;0.000478826610195777!GO:0000139;Golgi membrane;0.000503235876044607!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000503491422022111!GO:0008637;apoptotic mitochondrial changes;0.000505500442647154!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000528726373977314!GO:0035257;nuclear hormone receptor binding;0.000528901976825362!GO:0003729;mRNA binding;0.000536799709988221!GO:0005637;nuclear inner membrane;0.000586161725280106!GO:0006302;double-strand break repair;0.000598044083226425!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000622770208123138!GO:0005741;mitochondrial outer membrane;0.000626267835691214!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000658296939015565!GO:0016853;isomerase activity;0.000671147142406421!GO:0060090;molecular adaptor activity;0.000694288000300892!GO:0007006;mitochondrial membrane organization and biogenesis;0.000697245705919376!GO:0045454;cell redox homeostasis;0.000697462764885756!GO:0005769;early endosome;0.000714236137843493!GO:0016481;negative regulation of transcription;0.000818554868133155!GO:0015631;tubulin binding;0.000823667578117108!GO:0019867;outer membrane;0.000842278045094405!GO:0003678;DNA helicase activity;0.000870725760041218!GO:0051252;regulation of RNA metabolic process;0.00088391402252971!GO:0006891;intra-Golgi vesicle-mediated transport;0.000948155435228091!GO:0007051;spindle organization and biogenesis;0.0009689915509171!GO:0006414;translational elongation;0.000970966036767966!GO:0006289;nucleotide-excision repair;0.000970966036767966!GO:0006650;glycerophospholipid metabolic process;0.00100665011366604!GO:0016301;kinase activity;0.00101282831972714!GO:0000287;magnesium ion binding;0.00101970388487665!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00104062496540507!GO:0007264;small GTPase mediated signal transduction;0.00105709164784934!GO:0046489;phosphoinositide biosynthetic process;0.0010619105840971!GO:0004518;nuclease activity;0.00107410232799085!GO:0030658;transport vesicle membrane;0.00107581515212093!GO:0051090;regulation of transcription factor activity;0.00109925643633415!GO:0004004;ATP-dependent RNA helicase activity;0.0011037552567207!GO:0032561;guanyl ribonucleotide binding;0.00111105762848898!GO:0019001;guanyl nucleotide binding;0.00111105762848898!GO:0031968;organelle outer membrane;0.00112766586356063!GO:0019843;rRNA binding;0.00115469204095608!GO:0022890;inorganic cation transmembrane transporter activity;0.00116444176281801!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0012244445331163!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0012244445331163!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0012244445331163!GO:0006611;protein export from nucleus;0.00128709280729923!GO:0010468;regulation of gene expression;0.00132447145010326!GO:0043681;protein import into mitochondrion;0.00135109246052038!GO:0005774;vacuolar membrane;0.00156148607933346!GO:0030118;clathrin coat;0.0015814103409758!GO:0003714;transcription corepressor activity;0.00165184608278712!GO:0051092;activation of NF-kappaB transcription factor;0.00177013373970117!GO:0046649;lymphocyte activation;0.0017727058598551!GO:0009889;regulation of biosynthetic process;0.00178908539055369!GO:0048500;signal recognition particle;0.0018931939609153!GO:0000776;kinetochore;0.0019438110381015!GO:0008624;induction of apoptosis by extracellular signals;0.00209814833600541!GO:0051251;positive regulation of lymphocyte activation;0.00215512003911207!GO:0042802;identical protein binding;0.00220496435551576!GO:0019210;kinase inhibitor activity;0.00222278258859678!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00237104927498912!GO:0007093;mitotic cell cycle checkpoint;0.00251418713756923!GO:0046474;glycerophospholipid biosynthetic process;0.00251923318044702!GO:0031072;heat shock protein binding;0.00258436050074372!GO:0048471;perinuclear region of cytoplasm;0.00258981769313071!GO:0000082;G1/S transition of mitotic cell cycle;0.00260695409021258!GO:0051249;regulation of lymphocyte activation;0.00264208639551223!GO:0004860;protein kinase inhibitor activity;0.00270489469316655!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00270489469316655!GO:0005048;signal sequence binding;0.0027147376121865!GO:0005765;lysosomal membrane;0.0027147376121865!GO:0006383;transcription from RNA polymerase III promoter;0.00274224059369882!GO:0050865;regulation of cell activation;0.00274382618632138!GO:0019955;cytokine binding;0.00274382618632138!GO:0032259;methylation;0.00275044722269446!GO:0001836;release of cytochrome c from mitochondria;0.00277065894602753!GO:0008033;tRNA processing;0.0028129227650303!GO:0031982;vesicle;0.00284652175400558!GO:0051223;regulation of protein transport;0.00298180899391395!GO:0030660;Golgi-associated vesicle membrane;0.00306350554551086!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00307771914074664!GO:0050863;regulation of T cell activation;0.00314882523092534!GO:0043414;biopolymer methylation;0.00315359440060707!GO:0005684;U2-dependent spliceosome;0.00325766103724864!GO:0016741;transferase activity, transferring one-carbon groups;0.00326758817963586!GO:0008168;methyltransferase activity;0.00329154509287199!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00340052573808434!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00340052573808434!GO:0051052;regulation of DNA metabolic process;0.00340052573808434!GO:0022415;viral reproductive process;0.00340052573808434!GO:0043488;regulation of mRNA stability;0.00340639994921582!GO:0043487;regulation of RNA stability;0.00340639994921582!GO:0046822;regulation of nucleocytoplasmic transport;0.00345466972316859!GO:0001772;immunological synapse;0.00346375823579082!GO:0006338;chromatin remodeling;0.00350114024980982!GO:0016251;general RNA polymerase II transcription factor activity;0.00352428063155706!GO:0006839;mitochondrial transport;0.00355628354988204!GO:0007059;chromosome segregation;0.0035823943073775!GO:0051920;peroxiredoxin activity;0.00361747225142195!GO:0051087;chaperone binding;0.00369538368138788!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00369799343479207!GO:0045047;protein targeting to ER;0.00369799343479207!GO:0016791;phosphoric monoester hydrolase activity;0.00373727630017415!GO:0016311;dephosphorylation;0.00374724110481397!GO:0044437;vacuolar part;0.00381027518618078!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00395976444824349!GO:0004527;exonuclease activity;0.00412621547728298!GO:0007265;Ras protein signal transduction;0.00423191434164809!GO:0006607;NLS-bearing substrate import into nucleus;0.00431871675796201!GO:0016197;endosome transport;0.00447836698498099!GO:0008312;7S RNA binding;0.00460599133340134!GO:0005070;SH3/SH2 adaptor activity;0.00487649082258629!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00527269034958483!GO:0051336;regulation of hydrolase activity;0.00532042628474357!GO:0047485;protein N-terminus binding;0.00538987750286881!GO:0030518;steroid hormone receptor signaling pathway;0.00541015137391229!GO:0009165;nucleotide biosynthetic process;0.00547785536931613!GO:0008022;protein C-terminus binding;0.00560316406294235!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00569478163133792!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00578337753247074!GO:0008270;zinc ion binding;0.00590057497622175!GO:0019901;protein kinase binding;0.00592230004759567!GO:0003682;chromatin binding;0.00592230004759567!GO:0016788;hydrolase activity, acting on ester bonds;0.00622264269451495!GO:0051789;response to protein stimulus;0.00624786555834848!GO:0006986;response to unfolded protein;0.00624786555834848!GO:0043281;regulation of caspase activity;0.00633613597091791!GO:0008047;enzyme activator activity;0.00655826983257433!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00658216721220063!GO:0015002;heme-copper terminal oxidase activity;0.00658216721220063!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00658216721220063!GO:0004129;cytochrome-c oxidase activity;0.00658216721220063!GO:0006091;generation of precursor metabolites and energy;0.00661486540746538!GO:0051059;NF-kappaB binding;0.00661486540746538!GO:0048487;beta-tubulin binding;0.0069798598159248!GO:0006284;base-excision repair;0.00703806878906167!GO:0046966;thyroid hormone receptor binding;0.00705741145300523!GO:0031410;cytoplasmic vesicle;0.00709963044205018!GO:0008139;nuclear localization sequence binding;0.00721355374747256!GO:0007050;cell cycle arrest;0.00758890126349937!GO:0031988;membrane-bound vesicle;0.00759203772082744!GO:0050870;positive regulation of T cell activation;0.00796655230853282!GO:0003746;translation elongation factor activity;0.0080570343950444!GO:0000228;nuclear chromosome;0.00808225515489903!GO:0031902;late endosome membrane;0.00811175080891873!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.00812415099781709!GO:0031124;mRNA 3'-end processing;0.00815201049422699!GO:0032508;DNA duplex unwinding;0.00820911307827485!GO:0032392;DNA geometric change;0.00820911307827485!GO:0006497;protein amino acid lipidation;0.00825272895205359!GO:0000049;tRNA binding;0.00826675287506568!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00842817430300542!GO:0018193;peptidyl-amino acid modification;0.00848674308387583!GO:0030880;RNA polymerase complex;0.00861646332067598!GO:0003711;transcription elongation regulator activity;0.00868048723407402!GO:0000209;protein polyubiquitination;0.00868048723407402!GO:0004177;aminopeptidase activity;0.00870710329426046!GO:0016584;nucleosome positioning;0.00873738809446873!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00873738809446873!GO:0006007;glucose catabolic process;0.00885674319757193!GO:0044452;nucleolar part;0.00892080370671474!GO:0019904;protein domain specific binding;0.00896318800766143!GO:0016605;PML body;0.0090686332985223!GO:0051098;regulation of binding;0.00928574327670051!GO:0006626;protein targeting to mitochondrion;0.00929411589563724!GO:0006405;RNA export from nucleus;0.00949843620267028!GO:0008017;microtubule binding;0.00955038933400942!GO:0046467;membrane lipid biosynthetic process;0.0097490584431747!GO:0045936;negative regulation of phosphate metabolic process;0.00997033923648992!GO:0016859;cis-trans isomerase activity;0.0101167132847771!GO:0045321;leukocyte activation;0.0101265997801064!GO:0042393;histone binding;0.0103350657154369!GO:0030119;AP-type membrane coat adaptor complex;0.0105581583947673!GO:0031252;leading edge;0.0106979745336111!GO:0007259;JAK-STAT cascade;0.0107501440948565!GO:0019900;kinase binding;0.010950403339075!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.010950403339075!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0109624419206695!GO:0019318;hexose metabolic process;0.0109874074863701!GO:0016272;prefoldin complex;0.0110140233056023!GO:0051235;maintenance of localization;0.0112111605422392!GO:0042770;DNA damage response, signal transduction;0.0113374072401175!GO:0043621;protein self-association;0.0114760377494339!GO:0006013;mannose metabolic process;0.0114774710749594!GO:0005996;monosaccharide metabolic process;0.0114774710749594!GO:0051881;regulation of mitochondrial membrane potential;0.0115721450680957!GO:0008629;induction of apoptosis by intracellular signals;0.0116819135900078!GO:0022411;cellular component disassembly;0.0117828963462911!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0119362718691455!GO:0051540;metal cluster binding;0.0121188963740643!GO:0051536;iron-sulfur cluster binding;0.0121188963740643!GO:0007040;lysosome organization and biogenesis;0.0121353047245953!GO:0005788;endoplasmic reticulum lumen;0.0121364121904896!GO:0030125;clathrin vesicle coat;0.0123607468225775!GO:0030665;clathrin coated vesicle membrane;0.0123607468225775!GO:0030663;COPI coated vesicle membrane;0.0127016150788711!GO:0030126;COPI vesicle coat;0.0127016150788711!GO:0009966;regulation of signal transduction;0.0127331631428136!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0128603821555716!GO:0033116;ER-Golgi intermediate compartment membrane;0.0128603821555716!GO:0003725;double-stranded RNA binding;0.0130132417551349!GO:0030131;clathrin adaptor complex;0.0130664705132248!GO:0016569;covalent chromatin modification;0.0135996044312419!GO:0030137;COPI-coated vesicle;0.0137065242684278!GO:0030522;intracellular receptor-mediated signaling pathway;0.0137966997192283!GO:0045076;regulation of interleukin-2 biosynthetic process;0.0138568297680928!GO:0006268;DNA unwinding during replication;0.0138568297680928!GO:0046426;negative regulation of JAK-STAT cascade;0.0142279487220129!GO:0043596;nuclear replication fork;0.0142279487220129!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0143218970073114!GO:0010257;NADH dehydrogenase complex assembly;0.0143218970073114!GO:0033108;mitochondrial respiratory chain complex assembly;0.0143218970073114!GO:0032940;secretion by cell;0.0144386838198375!GO:0006506;GPI anchor biosynthetic process;0.0145738106112028!GO:0016023;cytoplasmic membrane-bound vesicle;0.0148368836922067!GO:0032200;telomere organization and biogenesis;0.0149809065743883!GO:0000723;telomere maintenance;0.0149809065743883!GO:0032774;RNA biosynthetic process;0.0151873802399656!GO:0031625;ubiquitin protein ligase binding;0.0152551555413236!GO:0030217;T cell differentiation;0.0154481864594181!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.015562360238068!GO:0000428;DNA-directed RNA polymerase complex;0.015562360238068!GO:0045892;negative regulation of transcription, DNA-dependent;0.0155761074145261!GO:0004721;phosphoprotein phosphatase activity;0.0156505869025146!GO:0030127;COPII vesicle coat;0.0156681595425734!GO:0012507;ER to Golgi transport vesicle membrane;0.0156681595425734!GO:0000059;protein import into nucleus, docking;0.0159138338180803!GO:0040029;regulation of gene expression, epigenetic;0.0159580443095623!GO:0006595;polyamine metabolic process;0.0159640841009035!GO:0030132;clathrin coat of coated pit;0.015965470203438!GO:0006505;GPI anchor metabolic process;0.0159996107635169!GO:0030521;androgen receptor signaling pathway;0.0160286085686918!GO:0030867;rough endoplasmic reticulum membrane;0.0160728516375537!GO:0004003;ATP-dependent DNA helicase activity;0.0165008927121686!GO:0051539;4 iron, 4 sulfur cluster binding;0.0165297817930963!GO:0044438;microbody part;0.0169465159763408!GO:0044439;peroxisomal part;0.0169465159763408!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0171162290877136!GO:0007052;mitotic spindle organization and biogenesis;0.0171723633395688!GO:0006351;transcription, DNA-dependent;0.0171723633395688!GO:0030134;ER to Golgi transport vesicle;0.0172466772235!GO:0003677;DNA binding;0.0173166041297424!GO:0045045;secretory pathway;0.0173373315495067!GO:0005791;rough endoplasmic reticulum;0.0175669645774872!GO:0016860;intramolecular oxidoreductase activity;0.017685243459921!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0177700477865232!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.018008381922997!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.018008381922997!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.018008381922997!GO:0030176;integral to endoplasmic reticulum membrane;0.01808192286362!GO:0004722;protein serine/threonine phosphatase activity;0.018536302818811!GO:0006468;protein amino acid phosphorylation;0.0185467657827274!GO:0030133;transport vesicle;0.018598809194001!GO:0004532;exoribonuclease activity;0.018598809194001!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.018598809194001!GO:0030258;lipid modification;0.0188859856401976!GO:0042101;T cell receptor complex;0.0188859856401976!GO:0031123;RNA 3'-end processing;0.0189552225284898!GO:0008213;protein amino acid alkylation;0.0190353166529842!GO:0006479;protein amino acid methylation;0.0190353166529842!GO:0044454;nuclear chromosome part;0.01903552971591!GO:0051091;positive regulation of transcription factor activity;0.0193557657860904!GO:0045086;positive regulation of interleukin-2 biosynthetic process;0.019472953736318!GO:0000339;RNA cap binding;0.0198651887613556!GO:0015923;mannosidase activity;0.020086295128235!GO:0016570;histone modification;0.0205399847641506!GO:0045449;regulation of transcription;0.0205429885729791!GO:0004197;cysteine-type endopeptidase activity;0.0205429885729791!GO:0006376;mRNA splice site selection;0.0205630605633682!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0205630605633682!GO:0008408;3'-5' exonuclease activity;0.0205717118949185!GO:0006778;porphyrin metabolic process;0.0206412548896052!GO:0033013;tetrapyrrole metabolic process;0.0206412548896052!GO:0046483;heterocycle metabolic process;0.021192263831998!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.021203267024826!GO:0042326;negative regulation of phosphorylation;0.0213779669918514!GO:0030695;GTPase regulator activity;0.0214486073789005!GO:0046979;TAP2 binding;0.0215066926331815!GO:0046977;TAP binding;0.0215066926331815!GO:0046978;TAP1 binding;0.0215066926331815!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0219452552921367!GO:0005869;dynactin complex;0.0219810719199693!GO:0043022;ribosome binding;0.022415229076197!GO:0044262;cellular carbohydrate metabolic process;0.0224817804978005!GO:0006672;ceramide metabolic process;0.0224817804978005!GO:0006914;autophagy;0.0226032129720511!GO:0050811;GABA receptor binding;0.0226642920915708!GO:0007034;vacuolar transport;0.0226942692138598!GO:0046519;sphingoid metabolic process;0.0227330486682416!GO:0004576;oligosaccharyl transferase activity;0.0227330486682416!GO:0048002;antigen processing and presentation of peptide antigen;0.0227890452735882!GO:0007033;vacuole organization and biogenesis;0.0229056979082798!GO:0042158;lipoprotein biosynthetic process;0.0232428039119858!GO:0009124;nucleoside monophosphate biosynthetic process;0.0234192656831116!GO:0009123;nucleoside monophosphate metabolic process;0.0234192656831116!GO:0005669;transcription factor TFIID complex;0.0234343706527733!GO:0000792;heterochromatin;0.0236464145418194!GO:0006458;'de novo' protein folding;0.0237376413063355!GO:0051084;'de novo' posttranslational protein folding;0.0237376413063355!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0238317938962986!GO:0031903;microbody membrane;0.0247543265638964!GO:0005778;peroxisomal membrane;0.0247543265638964!GO:0019783;small conjugating protein-specific protease activity;0.0250605098838075!GO:0009116;nucleoside metabolic process;0.0250982976703904!GO:0006919;caspase activation;0.0251434504758183!GO:0019079;viral genome replication;0.0251774919723792!GO:0006950;response to stress;0.0251774919723792!GO:0002440;production of molecular mediator of immune response;0.0257255648935385!GO:0000922;spindle pole;0.0258572315824244!GO:0019976;interleukin-2 binding;0.026162983616846!GO:0004911;interleukin-2 receptor activity;0.026162983616846!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0263045337070706!GO:0046365;monosaccharide catabolic process;0.0268940629365091!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0268940629365091!GO:0004843;ubiquitin-specific protease activity;0.0272572230133567!GO:0043433;negative regulation of transcription factor activity;0.0274639200480138!GO:0042289;MHC class II protein binding;0.0277464731329565!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.028537769405615!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.028537769405615!GO:0006779;porphyrin biosynthetic process;0.028537769405615!GO:0033014;tetrapyrrole biosynthetic process;0.028537769405615!GO:0042094;interleukin-2 biosynthetic process;0.0286986363600729!GO:0051452;cellular pH reduction;0.0290139860981189!GO:0051453;regulation of cellular pH;0.0290139860981189!GO:0045851;pH reduction;0.0290139860981189!GO:0046983;protein dimerization activity;0.0290807312241769!GO:0000738;DNA catabolic process, exonucleolytic;0.0291532901677728!GO:0000910;cytokinesis;0.0291731532831688!GO:0051338;regulation of transferase activity;0.0291979598197414!GO:0008250;oligosaccharyl transferase complex;0.0291979598197414!GO:0008287;protein serine/threonine phosphatase complex;0.0296519008669753!GO:0008625;induction of apoptosis via death domain receptors;0.0296808787260313!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0299589899058014!GO:0030140;trans-Golgi network transport vesicle;0.0300320809810727!GO:0006378;mRNA polyadenylation;0.0300380982588974!GO:0009112;nucleobase metabolic process;0.0301135257374586!GO:0046982;protein heterodimerization activity;0.0302168382780324!GO:0006470;protein amino acid dephosphorylation;0.0302370125675038!GO:0051219;phosphoprotein binding;0.0306065519467021!GO:0035258;steroid hormone receptor binding;0.0306562928389065!GO:0008276;protein methyltransferase activity;0.0306596064872749!GO:0005031;tumor necrosis factor receptor activity;0.0308379640984278!GO:0005832;chaperonin-containing T-complex;0.0308742643392292!GO:0005876;spindle microtubule;0.031451118115046!GO:0005083;small GTPase regulator activity;0.0317414504149716!GO:0008320;protein transmembrane transporter activity;0.0317515197467639!GO:0043284;biopolymer biosynthetic process;0.0318957741507636!GO:0033673;negative regulation of kinase activity;0.0322220567367782!GO:0006469;negative regulation of protein kinase activity;0.0322220567367782!GO:0015980;energy derivation by oxidation of organic compounds;0.0328711468010137!GO:0000781;chromosome, telomeric region;0.0329173389296562!GO:0045185;maintenance of protein localization;0.0329991098926639!GO:0048524;positive regulation of viral reproduction;0.0332982895133146!GO:0042608;T cell receptor binding;0.0336609885077735!GO:0042168;heme metabolic process;0.0338108033361919!GO:0006518;peptide metabolic process;0.0338393501288151!GO:0006144;purine base metabolic process;0.0340045260416905!GO:0043549;regulation of kinase activity;0.0341159944627343!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0344353639989058!GO:0016763;transferase activity, transferring pentosyl groups;0.0345204424312119!GO:0000118;histone deacetylase complex;0.0348014637753455!GO:0005521;lamin binding;0.0352743229332786!GO:0045792;negative regulation of cell size;0.0356948642693633!GO:0002521;leukocyte differentiation;0.0356999213100336!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0358564128006572!GO:0016790;thiolester hydrolase activity;0.0359382332804816!GO:0005777;peroxisome;0.0362522243704481!GO:0042579;microbody;0.0362522243704481!GO:0001784;phosphotyrosine binding;0.0362527456170782!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0362527456170782!GO:0046164;alcohol catabolic process;0.0363634000410994!GO:0005784;translocon complex;0.0373205393873569!GO:0045309;protein phosphorylated amino acid binding;0.0376446220826909!GO:0008538;proteasome activator activity;0.0376885444313939!GO:0051348;negative regulation of transferase activity;0.037774734788811!GO:0000152;nuclear ubiquitin ligase complex;0.0384637783107875!GO:0004221;ubiquitin thiolesterase activity;0.0395039598732765!GO:0030833;regulation of actin filament polymerization;0.0396193935921069!GO:0005092;GDP-dissociation inhibitor activity;0.0396552823522981!GO:0017134;fibroblast growth factor binding;0.0396621503186551!GO:0022884;macromolecule transmembrane transporter activity;0.0400212212812686!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0400212212812686!GO:0030308;negative regulation of cell growth;0.0400765941893883!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0402402272645566!GO:0030041;actin filament polymerization;0.0402775594234952!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0403705420068002!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0403705420068002!GO:0022406;membrane docking;0.041036454954851!GO:0048278;vesicle docking;0.041036454954851!GO:0051287;NAD binding;0.0413312149387068!GO:0051051;negative regulation of transport;0.0414676222526828!GO:0019320;hexose catabolic process;0.0415914253401203!GO:0019058;viral infectious cycle;0.0423896892813948!GO:0030433;ER-associated protein catabolic process;0.0426866647681127!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0426866647681127!GO:0045603;positive regulation of endothelial cell differentiation;0.0426866647681127!GO:0009161;ribonucleoside monophosphate metabolic process;0.0428764692791605!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0428764692791605!GO:0006096;glycolysis;0.0430163467348091!GO:0002820;negative regulation of adaptive immune response;0.0433214434911031!GO:0002823;negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0433214434911031!GO:0032507;maintenance of cellular protein localization;0.0438880766623761!GO:0005874;microtubule;0.0442145535698118!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0454791126322175!GO:0046914;transition metal ion binding;0.0457331282530286!GO:0019220;regulation of phosphate metabolic process;0.0457475100976539!GO:0051174;regulation of phosphorus metabolic process;0.0457475100976539!GO:0006783;heme biosynthetic process;0.0458180589410704!GO:0005095;GTPase inhibitor activity;0.0458249420994493!GO:0002507;tolerance induction;0.0462748191978961!GO:0006904;vesicle docking during exocytosis;0.0464309312366932!GO:0004907;interleukin receptor activity;0.0468356323426752!GO:0006730;one-carbon compound metabolic process;0.0471260309221289!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.047430336847142!GO:0031647;regulation of protein stability;0.047430336847142!GO:0007021;tubulin folding;0.0475312233774999!GO:0043280;positive regulation of caspase activity;0.0476957461655077!GO:0045061;thymic T cell selection;0.0479368597257143!GO:0005652;nuclear lamina;0.0481123799302738!GO:0006596;polyamine biosynthetic process;0.0482111686609014!GO:0043601;nuclear replisome;0.0482732198183657!GO:0030894;replisome;0.0482732198183657!GO:0043028;caspase regulator activity;0.0485054043212114!GO:0016491;oxidoreductase activity;0.0489887141762177!GO:0005096;GTPase activator activity;0.0489887141762177!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0497457053431964
 |sample_id=11916
 |sample_note=
@@ Line 75: / Line 99: @@
 |sample_tissue=blood
 |top_motifs=ZBTB16:2.74253672649;CDX1,2,4:2.22051977968;PAX3,7:2.1255853689;ELF1,2,4:2.09584340837;PITX1..3:1.76032529528;NKX6-1,2:1.73193930703;IKZF2:1.70261644835;RUNX1..3:1.6882330424;RORA:1.67195658522;FOXP1:1.66803134185;TLX2:1.63789460427;ETS1,2:1.33791969408;POU2F1..3:1.28992079484;PAX4:1.28078695382;TOPORS:1.24362174169;SPI1:1.17657795722;IRF1,2:1.13285088223;PDX1:1.13014663743;FOX{F1,F2,J1}:1.09713376378;AIRE:1.08363732361;DMAP1_NCOR{1,2}_SMARC:1.07666228867;POU1F1:1.06362599435;BPTF:1.01680026976;NKX3-1:0.912313508057;GATA6:0.859011187791;ELK1,4_GABP{A,B1}:0.822874881054;CRX:0.806092021694;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.793216521923;HMX1:0.785317682496;E2F1..5:0.699357199887;STAT1,3:0.671996217385;SPIB:0.638714922653;LMO2:0.61171044295;PBX1:0.596376960567;STAT2,4,6:0.579471386969;BREu{core}:0.576486569948;ZNF384:0.560674220731;STAT5{A,B}:0.551335700489;MYOD1:0.542626540832;YY1:0.536398340103;NANOG{mouse}:0.514414559509;CREB1:0.502547536779;ZEB1:0.481202446686;FOXO1,3,4:0.451607718404;FOX{D1,D2}:0.448567789963;FOXM1:0.376443220198;ATF5_CREB3:0.366308600475;NFKB1_REL_RELA:0.353332607478;SNAI1..3:0.349069945452;IRF7:0.347376776537;EVI1:0.320574580296;HES1:0.301985851359;NFY{A,B,C}:0.294530749866;NKX2-2,8:0.282520990198;OCT4_SOX2{dimer}:0.280710823532;PAX8:0.267024793128;MYB:0.252844944536;TGIF1:0.217336862277;FOXQ1:0.217321164219;RFX2..5_RFXANK_RFXAP:0.209115700127;PAX2:0.173586977572;NR5A1,2:0.167523440578;SMAD1..7,9:0.161314216834;SOX5:0.148912969012;HOX{A6,A7,B6,B7}:0.130625379827;SREBF1,2:0.123382267041;LEF1_TCF7_TCF7L1,2:0.10064701807;FOXP3:0.0679160032101;CUX2:0.0635881419217;DBP:0.0631183331576;FOXD3:0.00228851462359;EP300:-0.0155901597556;NRF1:-0.044075824823;FOX{I1,J2}:-0.0480652352817;TP53:-0.0531291812021;SPZ1:-0.0582354986915;ZNF423:-0.100349970888;GFI1:-0.141152428135;HNF4A_NR2F1,2:-0.141749023658;FOXA2:-0.156165836781;ZNF148:-0.158265091247;ATF4:-0.1583027534;ZNF143:-0.175731568817;HAND1,2:-0.193204842048;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.194321143101;T:-0.198429456496;FOXN1:-0.214372397676;RXRA_VDR{dimer}:-0.218881357198;RREB1:-0.225717670866;ONECUT1,2:-0.230034913802;JUN:-0.23777521131;GCM1,2:-0.243434637205;NFATC1..3:-0.26394209466;CDC5L:-0.265347022267;NFE2L1:-0.265527614334;GLI1..3:-0.28447574189;ATF2:-0.302954802738;NR1H4:-0.378422844854;AHR_ARNT_ARNT2:-0.399732213845;TAL1_TCF{3,4,12}:-0.404640739348;MYFfamily:-0.417284636695;NR3C1:-0.424129106411;UFEwm:-0.434342155126;ALX1:-0.437729280043;PRRX1,2:-0.438865633113;TFDP1:-0.444616559638;SRF:-0.449043827682;TFCP2:-0.459753363888;NFE2:-0.47114238861;CEBPA,B_DDIT3:-0.473487808889;NFIL3:-0.478037099584;NKX2-1,4:-0.489271245831;ARID5B:-0.492253903065;HNF1A:-0.492497154976;FOS_FOS{B,L1}_JUN{B,D}:-0.534630723033;AR:-0.541212852289;PPARG:-0.544637891077;BACH2:-0.547201733339;ALX4:-0.548641093923;HOXA9_MEIS1:-0.563523176045;POU3F1..4:-0.586487978005;ATF6:-0.591361786492;SOX2:-0.622045722607;SOX{8,9,10}:-0.680423424962;XCPE1{core}:-0.685735244169;ESR1:-0.718162018611;NHLH1,2:-0.778572512042;REST:-0.781597269365;NFIX:-0.785701476638;ZNF238:-0.796379908509;NFE2L2:-0.798825632275;NKX2-3_NKX2-5:-0.799038797616;FOSL2:-0.810490648407;TFAP4:-0.813644019279;PRDM1:-0.822095315385;ZBTB6:-0.82977261454;POU5F1:-0.834664209908;HMGA1,2:-0.845664270508;VSX1,2:-0.850378299269;NR6A1:-0.869430876758;RFX1:-0.876773352144;PAX5:-0.899093442912;PAX6:-0.906022994088;GATA4:-0.915756938698;GFI1B:-0.92097781855;TEF:-0.922343243593;MAFB:-0.934499882692;bHLH_family:-0.939792941497;HLF:-0.951861815006;LHX3,4:-0.962368636962;HIF1A:-0.974914256631;MED-1{core}:-0.977080916275;KLF4:-0.984813363896;MYBL2:-0.986226925357;ADNP_IRX_SIX_ZHX:-1.01520877922;HBP1_HMGB_SSRP1_UBTF:-1.0421500589;NANOG:-1.04756113415;EGR1..3:-1.0583453712;MEF2{A,B,C,D}:-1.07147938111;FOXL1:-1.07668307277;HSF1,2:-1.1327111334;EBF1:-1.13990025819;ZFP161:-1.14178291465;MTF1:-1.16590736614;ESRRA:-1.2030229622;MTE{core}:-1.22747999397;MAZ:-1.2374602786;HOX{A5,B5}:-1.23788931042;TFAP2B:-1.27377118999;MZF1:-1.29027774607;GTF2A1,2:-1.32020596911;GZF1:-1.3481618527;POU6F1:-1.3534055973;GTF2I:-1.35903796665;TFAP2{A,C}:-1.37246389803;HIC1:-1.38191115902;TBP:-1.3847862927;HOX{A4,D4}:-1.39847569416;TBX4,5:-1.41197843535;ZIC1..3:-1.44695395132;SOX17:-1.51915420206;EN1,2:-1.55364539189;PATZ1:-1.60271746269;PAX1,9:-1.61194522208;SP1:-1.64687669958;RXR{A,B,G}:-1.64756349558;TEAD1:-1.68029231953;RBPJ:-1.7353839908;TLX1..3_NFIC{dimer}:-1.74253568982;NKX3-2:-1.84798369112;IKZF1:-2.1148263193;XBP1:-2.31219743813
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11916-125G8;search_select_hide=table117:FF:11916-125G8
 }}

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FF:11916-125G8: Difference between revisions

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Latest revision as of 18:29, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0