FF:12171-128I2: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005774 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008068;DRR008940;DRZ000365;DRZ001750;DRZ011715;DRZ013100 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation2.CNhs12199.12171-128I2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation2.CNhs12199.12171-128I2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation2.CNhs12199.12171-128I2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation2.CNhs12199.12171-128I2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation2.CNhs12199.12171-128I2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12171-128I2 | |id=FF:12171-128I2 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000030;;FF:0000210 | ||
|is_obsolete= | |||
|library_id=CNhs12199 | |||
|library_id_phase_based=2:CNhs12199 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12171 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12171 | |||
|name=CD8+ T Cells (pluriselect), donor090325, donation2 | |name=CD8+ T Cells (pluriselect), donor090325, donation2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12199,LSID976,release010,COMPLETED | |profile_hcage=CNhs12199,LSID976,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.0261519723696438,0,0,0,0,-0.108014085347098,0.332817948322882,-0.277362132193514,-0.282403560576942,0,0,0,0.0523039447392876,0,0,0,0,0,0.0523039447392876,0.0523039447392876,0,0,-0.153323010348428,0,0,0,0,0.0523039447392876,-0.0979578962680575,0,0,0.0081668960366727,0,0,0,0,0,0,0,0,0,0,0,0,-0.268463870754523,0,0,0,0,0,0,0,0,0.0252751689987892,0,0,0,0.0523039447392876,0,-0.0391814462815772,0.0989803802232471,-0.0969923612426051,0,0,0.00163675301015019,0,0.0261519723696438,0,0,0,0,0,0,0,0,0.247462527077978,0,0,0.0523039447392876,0,0,0,0,0,0,0.0128393904340358,0,0,-0.0657851549288572,-0.169210947771539,0,0,0,-0.0707595753026402,-0.140635659788101,0,0,0.0494901901116235,0,0.0815010568461677,-0.112325228431252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0258118510146935,0,0,0,-0.229533065350686,-1.36020093611606,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.0815010568461677,0,0,0,0.0989803802232471,0,0,0,0.0523039447392876,0,0,0,-0.194874930546277,0,-0.259260098815394,-0.0912111977841843,0,0,0.241664319992613,0,0,0,0,0,0,0,0.0523039447392876,0,-0.128119866952565,0,-0.0504125515893149,0,0.483984438226087,0,0,0,0.63936480335177,0,-0.0844898571075725,-0.0683442610773682,0,0,0,0,-0.154320492922743,0,-0.068575539054453,-0.0827201683234173,0,-0.568594211358253,0.0432678834420652,0,0,0,-0.019227869164372,-0.614257179416422,0,0,0.309027492235788,0.216501812708991,0.0261519723696438,0,-0.391044581551635,0,-0.265119764126864,-0.199377860270629,0,-0.201429439909784,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,-0.0491717319882716,-0.0304099808375785,0,0,0,0.385171945250501,0,0,-0.373286155956567,-0.209612527481324,0.0198868746402307,-0.422345812040382,0,-0.0245728623192159,-0.195430804759079,-0.0898420862840815,-0.0913598928407382,-0.095097904631851,-0.189981719549847,-0.037135501304193,-0.0267422097637995,-0.20469778728951,-0.0678430093544398,-0.169210947771539,-0.000221955087137959,-1.2314085082871,0.055838699536745,0,0,-0.0775089264793031,0.777886319094736,0,-0.054209926166145,-0.132205371303032,-0.120650544716379,-0.644835464106066,-0.400136271859938,-0.501738027195605,-0.452545816041857,-0.0395325284566706,-0.0758065332989267,-0.060935177330953,-0.4215723249037,-0.15836840156239,0,-0.0356652622114173,-0.123433355406027,-0.733608162368035,0.607990325746688,-0.0324288317702115,-0.431673517071693,-0.0683442610773682,0,-0.955604017673977,-0.112302776807464,0,-0.100060289396979,-0.0769278622649945,0.0523039447392876,0,0.0884442993760126,0,0,0.0512000531186649,0.620032766726553,0.192650282969621,0,0.0487167797025413,-0.0286956600564745,0.319545858172428,0,0.323212131616057,-0.103190381387558,0.00407766621407002,-0.349034669378124,0,-0.261094110960668,-0.363843920625232,-0.164990696339003,-0.281271319576202,-0.00614288207253759,0.444184963381538,0.104761436302739,-0.0707595753026402,0.116276404947886,-0.165363325229787,-0.0881268324752877,-0.119828577519976,0.0917545129753272,0.43547099612771,-0.1154368971778,-0.229933451853845,0,0.24797379688797,0,0.0738002684798902,0,0.226386898766675,-0.207615803150359,0.917839449542659,0.0824224152834563,0,-0.0146816912096244,-0.689150557550727,0,-0.186437712244981,-0.0091469576307884,0.0989803802232471,-0.150367083334639,-0.697695966512583,-0.162160237752966,-0.138989456679195,0,-0.737776213650369,0,0,-0.190267056930612,0.122433305409353,0,-0.405883106248818,-0.609202914213396,-0.551912096456007,-0.0636671286956464,0,0,-0.645700337992725,0,0.0523039447392876,-0.60592806381803,0,-0.341966459267936,0.15079539248971,-0.0443293950749435,-0.108622809454255,0,0,0.204102153632492,0.861614687975322,-0.188195179130872,0,0,-0.160113092556886,-0.0176477327668856,0,0.426352950905693,0,-0.0288567163963235,0,0.0287525886999203,0,0,0.0261519723696438,0,0,-0.0740247586051155,-0.0486458056677315,0,-0.135242410402044,0,0,0,0,0,0.0523039447392876,0,0,-0.235202014696331,-0.0067637654456006,-0.12301741567642,0,0.0261519723696438,0,0,0.0904641219952418,0.200885171881742,0.179536408083874,-0.131862706497632,0,0,0,0,0.0128393904340358,0,0,0,0,-0.057730457053664,-0.496931820087307,0,0,0,-0.224650456862503,0,0,0,0,0.335951435646211,0,0,-0.466138210087375,0,-0.145051563560293,0.25123606877604,0,0.405745259344828,0.0581229554593881,-1.16849685483293,0,0,-0.261347131789888,0,0,0.263824792106847,-0.0300662782263787,0,0,0,0,0,0,0,0,0.534456164053237,0,0,0,0,0,0,0,0,0,0,0,0.182408849189239,-0.0922240566585104,-0.0640596705171081,0,0,0,0,0,0,-0.0241060230789031,-0.297297896588454,0,0.748770676452993,0,0,0,0,0,0,-0.291889531579368,0,0,0.0523039447392876,0,0,-0.0969923612426051,0,0.0523039447392876,0,0.0523039447392876,-0.564807121153884,0,0,-0.277362132193514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182868438513269,-1.32872456046873,0,0,0,0,0,0.332817948322882,0,-0.222529353466803,0,0,0,0,1.8159798766828,0,0,0,-0.104796384789156,0,-0.108014085347098,0,0,0,0,0,0,0,0,0,0,0.0523039447392876,0,0,0,0,0,0,0.0261519723696438,0,0,0,-0.229937090614025,0,0,0.0536021337072714,0,0,-0.206476380263398,0,0,0,0,0,0,0.0181497660830965,0,0,0,0,0,0,0,0,0.0261519723696438,0,0,0,0,0,0,0,0,0.0323967472827075,0,0,0,0,0,0,0,-0.00870607143544455,0,0,0,0,0.0523039447392876,0,0,-0.0979578962680575,0,0.0261519723696438,0.264374943927415,0,0,0,0,0,0,-0.134883078382351,-0.283220399823148,-0.140181079642928,0,0,0,-0.054385572482455,0.0523039447392876,0,-0.0820564584332857,0.0989803802232471,-0.0667773874189013,0.0523039447392876,0,0,0,0,0,0,0,0,0,0,0.0261519723696438,0.247462527077978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0.768156279461733,0,0,0,0,0,0,0,0.0494901901116235,0,0,0,0,0,0.194293006446757,0,0,0,0,0,0,0.247462527077978,0,0.0523039447392876,0,0,0,0,0,0,0,-0.0078593909057727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,-0.213086229657044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0523039447392876,0,0,0,0,0,0,0,0,0,0,0,0.05230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| |||
|rna_box=128 | |rna_box=128 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=4.957 | |rna_weight_ug=4.957 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.5346727563421e-223!GO:0043227;membrane-bound organelle;6.2824662246223e-196!GO:0043231;intracellular membrane-bound organelle;1.35457458998747e-195!GO:0043226;organelle;1.62356623995159e-182!GO:0043229;intracellular organelle;6.70426652158337e-182!GO:0005737;cytoplasm;2.72855433932898e-132!GO:0044422;organelle part;8.49566322567401e-110!GO:0044446;intracellular organelle part;2.61187723759954e-108!GO:0005634;nucleus;2.69140098163107e-106!GO:0043170;macromolecule metabolic process;1.55430029198473e-99!GO:0044237;cellular metabolic process;5.02343036223646e-95!GO:0044238;primary metabolic process;3.7962766083622e-92!GO:0044444;cytoplasmic part;3.7962766083622e-92!GO:0032991;macromolecular complex;3.0888933953463e-90!GO:0003723;RNA binding;1.89403940936873e-85!GO:0030529;ribonucleoprotein complex;2.76613320705904e-85!GO:0044428;nuclear part;1.83021167340445e-80!GO:0043283;biopolymer metabolic process;4.13724870612563e-69!GO:0043233;organelle lumen;3.74392522537089e-67!GO:0031974;membrane-enclosed lumen;3.74392522537089e-67!GO:0010467;gene expression;5.99728992951279e-67!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.60597341607178e-58!GO:0006396;RNA processing;5.04500405388584e-57!GO:0005515;protein binding;7.73317282854557e-54!GO:0006412;translation;1.51934565451169e-52!GO:0033036;macromolecule localization;1.44733927391967e-50!GO:0031981;nuclear lumen;4.90799334211549e-49!GO:0005739;mitochondrion;9.23874740945145e-49!GO:0015031;protein transport;4.14321495374157e-48!GO:0019538;protein metabolic process;8.24375733150265e-48!GO:0016071;mRNA metabolic process;2.42350068410386e-47!GO:0045184;establishment of protein localization;1.53180699161792e-46!GO:0008104;protein localization;2.15372244888359e-46!GO:0003676;nucleic acid binding;4.9052733995091e-46!GO:0044267;cellular protein metabolic process;1.85664844818455e-45!GO:0005840;ribosome;3.04025460480476e-45!GO:0044260;cellular macromolecule metabolic process;1.51664203222893e-44!GO:0043234;protein complex;6.72186274995903e-43!GO:0008380;RNA splicing;7.00260097414324e-42!GO:0006397;mRNA processing;2.28603927837382e-41!GO:0003735;structural constituent of ribosome;1.86760198758634e-39!GO:0009059;macromolecule biosynthetic process;3.73782332936374e-39!GO:0031090;organelle membrane;1.71915129100267e-37!GO:0016070;RNA metabolic process;6.1482905174602e-37!GO:0031967;organelle envelope;1.34097135150161e-35!GO:0044429;mitochondrial part;1.49513659770687e-35!GO:0031975;envelope;3.00058327264977e-35!GO:0005829;cytosol;4.30201964585265e-35!GO:0033279;ribosomal subunit;5.03190900279355e-35!GO:0046907;intracellular transport;9.71906692249229e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.90963802381265e-32!GO:0005654;nucleoplasm;1.65019919766542e-31!GO:0006886;intracellular protein transport;1.65019919766542e-31!GO:0005681;spliceosome;1.39567897425559e-30!GO:0016043;cellular component organization and biogenesis;1.42507161547571e-29!GO:0006259;DNA metabolic process;1.71683894947692e-28!GO:0044249;cellular biosynthetic process;2.53916078348041e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.7589916110738e-28!GO:0009058;biosynthetic process;7.11673818667386e-28!GO:0065003;macromolecular complex assembly;7.09894117006101e-27!GO:0044445;cytosolic part;1.29350721159611e-25!GO:0000166;nucleotide binding;2.41006136743718e-25!GO:0044451;nucleoplasm part;6.12632829837054e-25!GO:0022607;cellular component assembly;7.98638160588357e-24!GO:0006512;ubiquitin cycle;9.24501248206241e-24!GO:0051641;cellular localization;1.7757230572421e-23!GO:0051649;establishment of cellular localization;2.11145117590895e-23!GO:0005740;mitochondrial envelope;1.63315204611106e-22!GO:0031966;mitochondrial membrane;1.1380995335467e-21!GO:0019866;organelle inner membrane;2.70493427167214e-21!GO:0006996;organelle organization and biogenesis;4.008585955752e-21!GO:0022618;protein-RNA complex assembly;1.07246648199378e-20!GO:0016874;ligase activity;8.53252284596426e-20!GO:0005743;mitochondrial inner membrane;1.37698043790559e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.19586300784381e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;5.26643267163447e-19!GO:0016462;pyrophosphatase activity;5.26643267163447e-19!GO:0006915;apoptosis;6.28153702316768e-19!GO:0012501;programmed cell death;6.3003745267653e-19!GO:0006119;oxidative phosphorylation;6.31174745426413e-19!GO:0005730;nucleolus;7.50325567331181e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;1.11185331263668e-18!GO:0017111;nucleoside-triphosphatase activity;1.16197067197323e-18!GO:0043412;biopolymer modification;1.48080020929785e-18!GO:0015935;small ribosomal subunit;1.9103261090113e-18!GO:0019941;modification-dependent protein catabolic process;1.9103261090113e-18!GO:0043632;modification-dependent macromolecule catabolic process;1.9103261090113e-18!GO:0044265;cellular macromolecule catabolic process;2.17856478598505e-18!GO:0006511;ubiquitin-dependent protein catabolic process;2.53525724926031e-18!GO:0044257;cellular protein catabolic process;3.17890871178185e-18!GO:0008219;cell death;3.75075798907373e-18!GO:0016265;death;3.75075798907373e-18!GO:0016604;nuclear body;4.17220167473248e-18!GO:0032553;ribonucleotide binding;1.75702082205227e-17!GO:0032555;purine ribonucleotide binding;1.75702082205227e-17!GO:0015934;large ribosomal subunit;1.8104535715882e-17!GO:0006605;protein targeting;4.25525235241851e-17!GO:0017076;purine nucleotide binding;4.57451692620403e-17!GO:0044455;mitochondrial membrane part;1.06246683236081e-16!GO:0050794;regulation of cellular process;1.4737125657396e-16!GO:0008135;translation factor activity, nucleic acid binding;3.61781334455178e-16!GO:0006464;protein modification process;4.17354705317699e-16!GO:0043285;biopolymer catabolic process;4.63829673284054e-16!GO:0043228;non-membrane-bound organelle;4.6410161235488e-16!GO:0043232;intracellular non-membrane-bound organelle;4.6410161235488e-16!GO:0006974;response to DNA damage stimulus;6.01671847549843e-16!GO:0031980;mitochondrial lumen;1.11285804122812e-15!GO:0005759;mitochondrial matrix;1.11285804122812e-15!GO:0008134;transcription factor binding;1.47517846710211e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;1.51580155273668e-15!GO:0000375;RNA splicing, via transesterification reactions;1.51580155273668e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.51580155273668e-15!GO:0006457;protein folding;1.9866870767625e-15!GO:0006913;nucleocytoplasmic transport;2.98053315381788e-15!GO:0016607;nuclear speck;4.47051696712484e-15!GO:0051169;nuclear transport;5.45065350426961e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.93357551491804e-15!GO:0043687;post-translational protein modification;9.29929933265832e-15!GO:0012505;endomembrane system;9.92390481087757e-15!GO:0005524;ATP binding;1.12389831575054e-14!GO:0006281;DNA repair;1.60941926832251e-14!GO:0032559;adenyl ribonucleotide binding;3.53167264606959e-14!GO:0000502;proteasome complex (sensu Eukaryota);3.76133430865366e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.42398919934863e-14!GO:0009057;macromolecule catabolic process;4.81381038663363e-14!GO:0005635;nuclear envelope;5.89394628869396e-14!GO:0042623;ATPase activity, coupled;7.19515835990313e-14!GO:0016887;ATPase activity;7.31985298940034e-14!GO:0030554;adenyl nucleotide binding;1.2001290297956e-13!GO:0019222;regulation of metabolic process;1.41294663136528e-13!GO:0005746;mitochondrial respiratory chain;1.52814509245409e-13!GO:0004386;helicase activity;1.71947259426902e-13!GO:0051276;chromosome organization and biogenesis;2.91249903878163e-13!GO:0030163;protein catabolic process;3.54120469070775e-13!GO:0006413;translational initiation;4.55479091497813e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;4.69588499607393e-13!GO:0042981;regulation of apoptosis;6.85753337542231e-13!GO:0043067;regulation of programmed cell death;9.95748864233247e-13!GO:0003743;translation initiation factor activity;1.12149570725224e-12!GO:0031965;nuclear membrane;1.12326461604944e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.34268272675103e-12!GO:0003954;NADH dehydrogenase activity;1.34268272675103e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.34268272675103e-12!GO:0048193;Golgi vesicle transport;1.66103240985368e-12!GO:0006323;DNA packaging;1.84604830509225e-12!GO:0042254;ribosome biogenesis and assembly;2.0927278006084e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.4268866457713e-12!GO:0048770;pigment granule;2.94376909546883e-12!GO:0042470;melanosome;2.94376909546883e-12!GO:0008026;ATP-dependent helicase activity;3.73778412586779e-12!GO:0044248;cellular catabolic process;8.01078272795453e-12!GO:0016568;chromatin modification;1.71653248277868e-11!GO:0031323;regulation of cellular metabolic process;1.89423352181062e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.086711776403e-11!GO:0042773;ATP synthesis coupled electron transport;2.086711776403e-11!GO:0005794;Golgi apparatus;3.5699095795797e-11!GO:0007049;cell cycle;3.5699095795797e-11!GO:0008639;small protein conjugating enzyme activity;3.60347152437233e-11!GO:0006446;regulation of translational initiation;4.60499485203288e-11!GO:0016192;vesicle-mediated transport;6.53455344909763e-11!GO:0030964;NADH dehydrogenase complex (quinone);6.56173824843259e-11!GO:0045271;respiratory chain complex I;6.56173824843259e-11!GO:0005747;mitochondrial respiratory chain complex I;6.56173824843259e-11!GO:0004842;ubiquitin-protein ligase activity;6.66362539056236e-11!GO:0050789;regulation of biological process;7.05495591752693e-11!GO:0017038;protein import;8.99796743289723e-11!GO:0019787;small conjugating protein ligase activity;1.24083328119312e-10!GO:0005761;mitochondrial ribosome;1.27545441780534e-10!GO:0000313;organellar ribosome;1.27545441780534e-10!GO:0044453;nuclear membrane part;1.48864163722743e-10!GO:0006350;transcription;1.49065508094162e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.49645288179247e-10!GO:0008270;zinc ion binding;2.41875512028977e-10!GO:0051082;unfolded protein binding;2.82366149314159e-10!GO:0050657;nucleic acid transport;4.19438626052284e-10!GO:0051236;establishment of RNA localization;4.19438626052284e-10!GO:0050658;RNA transport;4.19438626052284e-10!GO:0006403;RNA localization;5.49796827981844e-10!GO:0010468;regulation of gene expression;6.96237448844949e-10!GO:0003712;transcription cofactor activity;9.06378587014838e-10!GO:0005694;chromosome;1.0409314653863e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.4592204908017e-09!GO:0043566;structure-specific DNA binding;2.0639439203955e-09!GO:0005643;nuclear pore;2.12970986788703e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.0841872863739e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.10632081255923e-09!GO:0008565;protein transporter activity;3.54226082390639e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.66802858577785e-09!GO:0006399;tRNA metabolic process;4.26364782314581e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.58605005838591e-09!GO:0009719;response to endogenous stimulus;5.22676507826925e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.78416440994971e-09!GO:0051186;cofactor metabolic process;6.19711730920611e-09!GO:0006364;rRNA processing;9.74590834255816e-09!GO:0016072;rRNA metabolic process;9.80069388311625e-09!GO:0007243;protein kinase cascade;1.03195381887001e-08!GO:0005768;endosome;1.06583183477832e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.08016902893327e-08!GO:0016881;acid-amino acid ligase activity;1.34529877140259e-08!GO:0051028;mRNA transport;1.49378210980036e-08!GO:0019829;cation-transporting ATPase activity;1.52484222829917e-08!GO:0051246;regulation of protein metabolic process;1.7949457297947e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.28119748025381e-08!GO:0065002;intracellular protein transport across a membrane;3.46867059208984e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.69512932645167e-08!GO:0003697;single-stranded DNA binding;3.97237019869306e-08!GO:0006793;phosphorus metabolic process;4.40027692756264e-08!GO:0006796;phosphate metabolic process;4.40027692756264e-08!GO:0044427;chromosomal part;4.42542184204295e-08!GO:0051170;nuclear import;5.87224803948897e-08!GO:0032774;RNA biosynthetic process;7.2400909925012e-08!GO:0022402;cell cycle process;8.69395113645331e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.5819295985894e-08!GO:0006606;protein import into nucleus;1.01840643449637e-07!GO:0006351;transcription, DNA-dependent;1.02552128664976e-07!GO:0032446;protein modification by small protein conjugation;1.18894546742075e-07!GO:0009259;ribonucleotide metabolic process;1.3859195390954e-07!GO:0016779;nucleotidyltransferase activity;1.5368635127401e-07!GO:0000245;spliceosome assembly;1.73564227051005e-07!GO:0044432;endoplasmic reticulum part;1.86111086425393e-07!GO:0003713;transcription coactivator activity;2.01269105997273e-07!GO:0016787;hydrolase activity;2.08418448276292e-07!GO:0046930;pore complex;2.1414658067899e-07!GO:0045449;regulation of transcription;2.14705547313857e-07!GO:0006333;chromatin assembly or disassembly;2.22668449872192e-07!GO:0005783;endoplasmic reticulum;2.74104802224519e-07!GO:0051726;regulation of cell cycle;2.74104802224519e-07!GO:0046914;transition metal ion binding;2.79844972335215e-07!GO:0006164;purine nucleotide biosynthetic process;2.82255423735872e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.00230078376647e-07!GO:0009260;ribonucleotide biosynthetic process;3.00230078376647e-07!GO:0005839;proteasome core complex (sensu Eukaryota);3.00434925890536e-07!GO:0000074;regulation of progression through cell cycle;3.41476927872645e-07!GO:0016310;phosphorylation;3.62435076081786e-07!GO:0016567;protein ubiquitination;3.78436482011658e-07!GO:0006163;purine nucleotide metabolic process;3.78650752294955e-07!GO:0009060;aerobic respiration;3.80866255099097e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.80866255099097e-07!GO:0015986;ATP synthesis coupled proton transport;4.46204349063933e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.46204349063933e-07!GO:0065004;protein-DNA complex assembly;5.24762336956262e-07!GO:0000151;ubiquitin ligase complex;5.57408717500568e-07!GO:0009152;purine ribonucleotide biosynthetic process;5.67201491949592e-07!GO:0006732;coenzyme metabolic process;5.90711206354653e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;5.95975859921397e-07!GO:0065007;biological regulation;7.37351985379898e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.88316935374126e-07!GO:0004812;aminoacyl-tRNA ligase activity;7.88316935374126e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.88316935374126e-07!GO:0009150;purine ribonucleotide metabolic process;7.98048531052671e-07!GO:0006916;anti-apoptosis;8.85640265439015e-07!GO:0004298;threonine endopeptidase activity;9.28350521209956e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.06318328115264e-06!GO:0006366;transcription from RNA polymerase II promoter;1.09005043864843e-06!GO:0006260;DNA replication;1.12871325847569e-06!GO:0065009;regulation of a molecular function;1.37316933041654e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.4596609733711e-06!GO:0043038;amino acid activation;1.53663155549497e-06!GO:0006418;tRNA aminoacylation for protein translation;1.53663155549497e-06!GO:0043039;tRNA aminoacylation;1.53663155549497e-06!GO:0006917;induction of apoptosis;1.68821179390936e-06!GO:0048523;negative regulation of cellular process;1.79148738839684e-06!GO:0003724;RNA helicase activity;2.10800054400436e-06!GO:0043069;negative regulation of programmed cell death;2.21969168643682e-06!GO:0005789;endoplasmic reticulum membrane;2.35935509671129e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.45416860818105e-06!GO:0051168;nuclear export;2.63789898426379e-06!GO:0012502;induction of programmed cell death;2.7488000401725e-06!GO:0045333;cellular respiration;2.75467379685433e-06!GO:0016563;transcription activator activity;2.861316952119e-06!GO:0009615;response to virus;2.89937672318082e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.0914489952931e-06!GO:0016740;transferase activity;3.44962459798078e-06!GO:0006613;cotranslational protein targeting to membrane;3.58409617071966e-06!GO:0043066;negative regulation of apoptosis;3.73526499795247e-06!GO:0006754;ATP biosynthetic process;4.40202079862834e-06!GO:0006753;nucleoside phosphate metabolic process;4.40202079862834e-06!GO:0006355;regulation of transcription, DNA-dependent;4.67877076514464e-06!GO:0030120;vesicle coat;4.71121304417297e-06!GO:0030662;coated vesicle membrane;4.71121304417297e-06!GO:0007242;intracellular signaling cascade;4.77599547757563e-06!GO:0000785;chromatin;5.04348915942315e-06!GO:0048475;coated membrane;5.30702083388889e-06!GO:0030117;membrane coat;5.30702083388889e-06!GO:0006461;protein complex assembly;5.67495451415665e-06!GO:0006417;regulation of translation;6.17392561768671e-06!GO:0043065;positive regulation of apoptosis;6.22492011365996e-06!GO:0009056;catabolic process;6.25597299807968e-06!GO:0045259;proton-transporting ATP synthase complex;7.7123419607678e-06!GO:0009055;electron carrier activity;8.6958582146124e-06!GO:0009142;nucleoside triphosphate biosynthetic process;9.04146412673891e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.04146412673891e-06!GO:0046034;ATP metabolic process;9.1983695316301e-06!GO:0005793;ER-Golgi intermediate compartment;9.22275060340939e-06!GO:0003677;DNA binding;9.72211540161601e-06!GO:0043068;positive regulation of programmed cell death;9.77948569164104e-06!GO:0006099;tricarboxylic acid cycle;1.03978678588368e-05!GO:0046356;acetyl-CoA catabolic process;1.03978678588368e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.08889530176772e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.08889530176772e-05!GO:0005770;late endosome;1.13786345774677e-05!GO:0009199;ribonucleoside triphosphate metabolic process;1.15816155613837e-05!GO:0005813;centrosome;1.21748934328216e-05!GO:0019899;enzyme binding;1.29799962488575e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.41672231679669e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.41672231679669e-05!GO:0001772;immunological synapse;1.58147845205583e-05!GO:0009141;nucleoside triphosphate metabolic process;1.78048024974778e-05!GO:0006612;protein targeting to membrane;1.844042170531e-05!GO:0008234;cysteine-type peptidase activity;2.00973162016559e-05!GO:0044440;endosomal part;2.24414853678381e-05!GO:0010008;endosome membrane;2.24414853678381e-05!GO:0051188;cofactor biosynthetic process;2.53904470148408e-05!GO:0006084;acetyl-CoA metabolic process;2.73394665104511e-05!GO:0005525;GTP binding;2.80958470128474e-05!GO:0003690;double-stranded DNA binding;3.226669600617e-05!GO:0044431;Golgi apparatus part;3.2772921882151e-05!GO:0031324;negative regulation of cellular metabolic process;3.39223367613795e-05!GO:0006310;DNA recombination;3.40988142566122e-05!GO:0005773;vacuole;3.4636025077752e-05!GO:0043623;cellular protein complex assembly;3.70666421880798e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.8691545381612e-05!GO:0016564;transcription repressor activity;3.89181292734333e-05!GO:0031326;regulation of cellular biosynthetic process;3.98344150146955e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.07739693216034e-05!GO:0015399;primary active transmembrane transporter activity;4.07739693216034e-05!GO:0048519;negative regulation of biological process;4.09812073516368e-05!GO:0007005;mitochondrion organization and biogenesis;4.84933907936734e-05!GO:0045786;negative regulation of progression through cell cycle;5.06684762936837e-05!GO:0005815;microtubule organizing center;5.14491126882539e-05!GO:0003899;DNA-directed RNA polymerase activity;5.40248546347743e-05!GO:0000323;lytic vacuole;6.18354277414867e-05!GO:0005764;lysosome;6.18354277414867e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.3224625659148e-05!GO:0006401;RNA catabolic process;7.91120571514016e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;7.9691626014374e-05!GO:0008186;RNA-dependent ATPase activity;8.18414504255129e-05!GO:0016363;nuclear matrix;8.72947178798435e-05!GO:0007264;small GTPase mediated signal transduction;8.86941860294321e-05!GO:0042101;T cell receptor complex;9.70600741929073e-05!GO:0009109;coenzyme catabolic process;9.93435711636009e-05!GO:0008632;apoptotic program;0.000105579272964055!GO:0042110;T cell activation;0.00012154256242753!GO:0003924;GTPase activity;0.000123651071467807!GO:0016481;negative regulation of transcription;0.000135308388237628!GO:0051187;cofactor catabolic process;0.000161955092100727!GO:0009108;coenzyme biosynthetic process;0.000180586000512115!GO:0006402;mRNA catabolic process;0.000180940536772929!GO:0007265;Ras protein signal transduction;0.000191750862368823!GO:0005798;Golgi-associated vesicle;0.0002048977332679!GO:0009967;positive regulation of signal transduction;0.000210345738029684!GO:0000278;mitotic cell cycle;0.000211131754620752!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000213974363045308!GO:0046649;lymphocyte activation;0.000221341861798489!GO:0005885;Arp2/3 protein complex;0.000228496111512564!GO:0051427;hormone receptor binding;0.000228496111512564!GO:0009892;negative regulation of metabolic process;0.000238747202267883!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000240905744337311!GO:0004004;ATP-dependent RNA helicase activity;0.000261784283040099!GO:0030384;phosphoinositide metabolic process;0.000264988195284357!GO:0009889;regulation of biosynthetic process;0.000268002693741223!GO:0006891;intra-Golgi vesicle-mediated transport;0.000269150859722706!GO:0008654;phospholipid biosynthetic process;0.000334959665103674!GO:0030695;GTPase regulator activity;0.000345464194696521!GO:0048522;positive regulation of cellular process;0.000350010699892689!GO:0032561;guanyl ribonucleotide binding;0.000351317390487886!GO:0019001;guanyl nucleotide binding;0.000351317390487886!GO:0003729;mRNA binding;0.000402089736673269!GO:0006752;group transfer coenzyme metabolic process;0.000402089736673269!GO:0043021;ribonucleoprotein binding;0.000412843902499607!GO:0016197;endosome transport;0.000443589477649672!GO:0035257;nuclear hormone receptor binding;0.000455455295227503!GO:0005667;transcription factor complex;0.000475602403061256!GO:0004674;protein serine/threonine kinase activity;0.000487718501238385!GO:0006261;DNA-dependent DNA replication;0.000487959246459802!GO:0006383;transcription from RNA polymerase III promoter;0.000487959246459802!GO:0008047;enzyme activator activity;0.000495726081148565!GO:0050790;regulation of catalytic activity;0.000507182796528934!GO:0043492;ATPase activity, coupled to movement of substances;0.000507807738172175!GO:0060090;molecular adaptor activity;0.000513444160489291!GO:0000139;Golgi membrane;0.000552498367774488!GO:0019783;small conjugating protein-specific protease activity;0.000563640842807272!GO:0031072;heat shock protein binding;0.00058551163430914!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000604058618184914!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000622660488997301!GO:0004843;ubiquitin-specific protease activity;0.000629318699538873!GO:0006352;transcription initiation;0.000634441411372431!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000681406274526451!GO:0005762;mitochondrial large ribosomal subunit;0.000744044949545335!GO:0000315;organellar large ribosomal subunit;0.000744044949545335!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000765896392082394!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00077177718921631!GO:0046489;phosphoinositide biosynthetic process;0.000784635334854073!GO:0044452;nucleolar part;0.000798618000061988!GO:0045321;leukocyte activation;0.000829960419206478!GO:0016251;general RNA polymerase II transcription factor activity;0.000841172510360037!GO:0005083;small GTPase regulator activity;0.000857907267104707!GO:0048500;signal recognition particle;0.000924730211161855!GO:0008033;tRNA processing;0.00102597848795106!GO:0005769;early endosome;0.00107610773312995!GO:0004221;ubiquitin thiolesterase activity;0.0012248916724996!GO:0019843;rRNA binding;0.00125666620974578!GO:0006611;protein export from nucleus;0.00127026767125709!GO:0031497;chromatin assembly;0.00131178649997765!GO:0031252;leading edge;0.00132235291265549!GO:0006334;nucleosome assembly;0.00136480745633062!GO:0005774;vacuolar membrane;0.00137575415309078!GO:0006650;glycerophospholipid metabolic process;0.00141201729266129!GO:0043681;protein import into mitochondrion;0.00144978890768494!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00147173786274945!GO:0051252;regulation of RNA metabolic process;0.00154822187601061!GO:0019867;outer membrane;0.00154822187601061!GO:0005741;mitochondrial outer membrane;0.00167671200444504!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00172455703437375!GO:0031968;organelle outer membrane;0.00176294872227193!GO:0007034;vacuolar transport;0.00176618094022772!GO:0000314;organellar small ribosomal subunit;0.00176618094022772!GO:0005763;mitochondrial small ribosomal subunit;0.00176618094022772!GO:0031902;late endosome membrane;0.00181320841301589!GO:0009117;nucleotide metabolic process;0.00182853746398167!GO:0005765;lysosomal membrane;0.00194425729091224!GO:0003725;double-stranded RNA binding;0.00204686508843818!GO:0004518;nuclease activity;0.00204986305005381!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00205428232099084!GO:0045047;protein targeting to ER;0.00205428232099084!GO:0008312;7S RNA binding;0.00210444833801291!GO:0032940;secretion by cell;0.00216881738336818!GO:0048471;perinuclear region of cytoplasm;0.00226967608821055!GO:0051251;positive regulation of lymphocyte activation;0.00245582028605377!GO:0043087;regulation of GTPase activity;0.00246796639608684!GO:0006818;hydrogen transport;0.00247037000133038!GO:0015992;proton transport;0.00248716024660928!GO:0015631;tubulin binding;0.0025298218563116!GO:0030658;transport vesicle membrane;0.00253592508085614!GO:0003678;DNA helicase activity;0.00254414077928806!GO:0032200;telomere organization and biogenesis;0.00255900145961398!GO:0000723;telomere maintenance;0.00255900145961398!GO:0004527;exonuclease activity;0.00255900145961398!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00260765739053058!GO:0005684;U2-dependent spliceosome;0.00260945116506539!GO:0000087;M phase of mitotic cell cycle;0.00271758285783188!GO:0003714;transcription corepressor activity;0.00274674907579075!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0027475051706109!GO:0051301;cell division;0.00296227050913411!GO:0046474;glycerophospholipid biosynthetic process;0.00300630313124232!GO:0006302;double-strand break repair;0.00302139795626055!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00309895954235307!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00309895954235307!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00309895954235307!GO:0008168;methyltransferase activity;0.00312561932367624!GO:0030118;clathrin coat;0.00316024325215913!GO:0006414;translational elongation;0.00316459255012001!GO:0032259;methylation;0.0033078715603266!GO:0048518;positive regulation of biological process;0.00346365203323789!GO:0051336;regulation of hydrolase activity;0.00350939955208328!GO:0016741;transferase activity, transferring one-carbon groups;0.00356478332432952!GO:0044437;vacuolar part;0.00358085503439675!GO:0006405;RNA export from nucleus;0.00364825867016082!GO:0003711;transcription elongation regulator activity;0.0037341573538515!GO:0006497;protein amino acid lipidation;0.00373928079828777!GO:0006289;nucleotide-excision repair;0.00375156768216528!GO:0006338;chromatin remodeling;0.00376621228990498!GO:0005096;GTPase activator activity;0.00391875400501895!GO:0045045;secretory pathway;0.00393117081827946!GO:0009966;regulation of signal transduction;0.00395636425216542!GO:0003746;translation elongation factor activity;0.00404414409311685!GO:0007067;mitosis;0.00411570433911841!GO:0045892;negative regulation of transcription, DNA-dependent;0.00432135513937057!GO:0005070;SH3/SH2 adaptor activity;0.00436989162615295!GO:0006607;NLS-bearing substrate import into nucleus;0.0044283940085322!GO:0043488;regulation of mRNA stability;0.00451349875783681!GO:0043487;regulation of RNA stability;0.00451349875783681!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00455512570655377!GO:0007006;mitochondrial membrane organization and biogenesis;0.00455792532539261!GO:0051092;activation of NF-kappaB transcription factor;0.00458364609973554!GO:0022415;viral reproductive process;0.00459023409715537!GO:0047485;protein N-terminus binding;0.0046311145849434!GO:0046966;thyroid hormone receptor binding;0.00480291417312258!GO:0003684;damaged DNA binding;0.00482356805008074!GO:0015630;microtubule cytoskeleton;0.00489333043992409!GO:0043414;biopolymer methylation;0.00495406608888945!GO:0046822;regulation of nucleocytoplasmic transport;0.00527854575564408!GO:0051087;chaperone binding;0.00529667685426908!GO:0016859;cis-trans isomerase activity;0.005796153990635!GO:0000049;tRNA binding;0.00604574330014814!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00620740394139868!GO:0016790;thiolester hydrolase activity;0.00634884635151762!GO:0006626;protein targeting to mitochondrion;0.0066811223802767!GO:0030660;Golgi-associated vesicle membrane;0.00678676440990654!GO:0008624;induction of apoptosis by extracellular signals;0.00705693614768418!GO:0002757;immune response-activating signal transduction;0.00709595574812384!GO:0022411;cellular component disassembly;0.00722703333794321!GO:0008017;microtubule binding;0.00733155852678953!GO:0005669;transcription factor TFIID complex;0.00733760123859804!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00796328240815296!GO:0000209;protein polyubiquitination;0.00821504597818429!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00846280735617294!GO:0051539;4 iron, 4 sulfur cluster binding;0.00858144586521286!GO:0022403;cell cycle phase;0.00895947900475344!GO:0003682;chromatin binding;0.00895947900475344!GO:0031625;ubiquitin protein ligase binding;0.00896233857761057!GO:0042287;MHC protein binding;0.00910479529458957!GO:0051090;regulation of transcription factor activity;0.00954406432864602!GO:0051920;peroxiredoxin activity;0.00955053184712126!GO:0042802;identical protein binding;0.00958656227652065!GO:0004532;exoribonuclease activity;0.00969382011370601!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00969382011370601!GO:0031124;mRNA 3'-end processing;0.00981962026912176!GO:0006506;GPI anchor biosynthetic process;0.00999023279656315!GO:0006376;mRNA splice site selection;0.00999272272123636!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00999272272123636!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0101924426553682!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0101924426553682!GO:0030518;steroid hormone receptor signaling pathway;0.0102594654215334!GO:0000781;chromosome, telomeric region;0.0103146707852068!GO:0022406;membrane docking;0.0104459355779948!GO:0048278;vesicle docking;0.0104459355779948!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0105357446349426!GO:0050870;positive regulation of T cell activation;0.0107758826508007!GO:0030521;androgen receptor signaling pathway;0.0109116762801997!GO:0005657;replication fork;0.0109116762801997!GO:0051098;regulation of binding;0.0111096115984875!GO:0006839;mitochondrial transport;0.0111096115984875!GO:0031982;vesicle;0.011296416019347!GO:0005637;nuclear inner membrane;0.01138463022661!GO:0030663;COPI coated vesicle membrane;0.0116526876318389!GO:0030126;COPI vesicle coat;0.0116526876318389!GO:0002764;immune response-regulating signal transduction;0.011724141004575!GO:0031123;RNA 3'-end processing;0.0119357108520343!GO:0051249;regulation of lymphocyte activation;0.0119759537668382!GO:0002376;immune system process;0.0121308370721906!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0122710115021369!GO:0018193;peptidyl-amino acid modification;0.0123326785104425!GO:0016584;nucleosome positioning;0.0126557722459362!GO:0050865;regulation of cell activation;0.0127014040684979!GO:0008408;3'-5' exonuclease activity;0.0127811122559573!GO:0016853;isomerase activity;0.0128724406383422!GO:0042158;lipoprotein biosynthetic process;0.0129149758749216!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0130523153250883!GO:0016272;prefoldin complex;0.0131038824482505!GO:0022890;inorganic cation transmembrane transporter activity;0.0131875277093051!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0131993110179695!GO:0008094;DNA-dependent ATPase activity;0.01349172301125!GO:0008097;5S rRNA binding;0.0135011408127777!GO:0051540;metal cluster binding;0.0135710450994607!GO:0051536;iron-sulfur cluster binding;0.0135710450994607!GO:0030880;RNA polymerase complex;0.0136877878126586!GO:0006505;GPI anchor metabolic process;0.0137678153540186!GO:0006904;vesicle docking during exocytosis;0.0143848816052902!GO:0030137;COPI-coated vesicle;0.0147183736380178!GO:0050852;T cell receptor signaling pathway;0.0147183736380178!GO:0004197;cysteine-type endopeptidase activity;0.0147679683938377!GO:0000059;protein import into nucleus, docking;0.0156298967880817!GO:0007004;telomere maintenance via telomerase;0.0156447259037278!GO:0005869;dynactin complex;0.0160815763883537!GO:0030258;lipid modification;0.0161367261217351!GO:0009112;nucleobase metabolic process;0.0161367261217351!GO:0050863;regulation of T cell activation;0.0163747946470685!GO:0044438;microbody part;0.0169691999314831!GO:0044439;peroxisomal part;0.0169691999314831!GO:0004003;ATP-dependent DNA helicase activity;0.0174261300490263!GO:0030119;AP-type membrane coat adaptor complex;0.017459179864183!GO:0008287;protein serine/threonine phosphatase complex;0.0177709715194525!GO:0005048;signal sequence binding;0.0179729357253486!GO:0046467;membrane lipid biosynthetic process;0.0183784502316627!GO:0000738;DNA catabolic process, exonucleolytic;0.0187713326020624!GO:0033116;ER-Golgi intermediate compartment membrane;0.0194555578046577!GO:0051223;regulation of protein transport;0.0198315416030927!GO:0007041;lysosomal transport;0.0202409467551655!GO:0006378;mRNA polyadenylation;0.0211553411938033!GO:0030867;rough endoplasmic reticulum membrane;0.0213734018479306!GO:0005832;chaperonin-containing T-complex;0.0213759373241201!GO:0015980;energy derivation by oxidation of organic compounds;0.021418860823321!GO:0005521;lamin binding;0.0215253806983063!GO:0000118;histone deacetylase complex;0.0218999764154058!GO:0032318;regulation of Ras GTPase activity;0.0220600855693559!GO:0030131;clathrin adaptor complex;0.0220981251922112!GO:0001775;cell activation;0.0224432878198409!GO:0016605;PML body;0.022955221591663!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0236774755902381!GO:0015002;heme-copper terminal oxidase activity;0.0236774755902381!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0236774755902381!GO:0004129;cytochrome-c oxidase activity;0.0236774755902381!GO:0043621;protein self-association;0.0242554008347237!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0245714651156596!GO:0000428;DNA-directed RNA polymerase complex;0.0245714651156596!GO:0016788;hydrolase activity, acting on ester bonds;0.0245714651156596!GO:0004722;protein serine/threonine phosphatase activity;0.0249976160108023!GO:0031988;membrane-bound vesicle;0.0250776276439383!GO:0030125;clathrin vesicle coat;0.0252752185538327!GO:0030665;clathrin coated vesicle membrane;0.0252752185538327!GO:0030522;intracellular receptor-mediated signaling pathway;0.0254432052390882!GO:0045058;T cell selection;0.0262538125467158!GO:0015923;mannosidase activity;0.0263985061512354!GO:0009116;nucleoside metabolic process;0.0263985061512354!GO:0005099;Ras GTPase activator activity;0.026613385331502!GO:0016585;chromatin remodeling complex;0.026613385331502!GO:0031410;cytoplasmic vesicle;0.0266158509796734!GO:0031903;microbody membrane;0.0266158509796734!GO:0005778;peroxisomal membrane;0.0266158509796734!GO:0040029;regulation of gene expression, epigenetic;0.0270024219730972!GO:0004576;oligosaccharyl transferase activity;0.0273017669339296!GO:0051052;regulation of DNA metabolic process;0.0273017669339296!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0273681901797968!GO:0016301;kinase activity;0.0273696839573248!GO:0032984;macromolecular complex disassembly;0.0274506917756164!GO:0006950;response to stress;0.0278684274391944!GO:0042608;T cell receptor binding;0.0278684274391944!GO:0030127;COPII vesicle coat;0.0279175744159775!GO:0012507;ER to Golgi transport vesicle membrane;0.0279175744159775!GO:0000339;RNA cap binding;0.0280008991379662!GO:0030134;ER to Golgi transport vesicle;0.0280008991379662!GO:0051789;response to protein stimulus;0.0283493198837525!GO:0006986;response to unfolded protein;0.0283493198837525!GO:0004402;histone acetyltransferase activity;0.0283836660985356!GO:0004468;lysine N-acetyltransferase activity;0.0283836660985356!GO:0048487;beta-tubulin binding;0.0284322830701253!GO:0008276;protein methyltransferase activity;0.0284970198550694!GO:0004177;aminopeptidase activity;0.0290300785692432!GO:0001784;phosphotyrosine binding;0.0290825521503246!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0293746798631362!GO:0000726;non-recombinational repair;0.0297670860308979!GO:0008022;protein C-terminus binding;0.0298922348898468!GO:0002378;immunoglobulin biosynthetic process;0.0306494640680376!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0306494640680376!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0306494640680376!GO:0045454;cell redox homeostasis;0.030671478462789!GO:0016044;membrane organization and biogenesis;0.0308237078630416!GO:0007030;Golgi organization and biogenesis;0.0315212320364045!GO:0009165;nucleotide biosynthetic process;0.0323356021188934!GO:0005095;GTPase inhibitor activity;0.0323356021188934!GO:0030833;regulation of actin filament polymerization;0.0324674649126143!GO:0050851;antigen receptor-mediated signaling pathway;0.0327786564510367!GO:0005791;rough endoplasmic reticulum;0.0334786624841217!GO:0008250;oligosaccharyl transferase complex;0.0341866608652117!GO:0048002;antigen processing and presentation of peptide antigen;0.0344525745317169!GO:0005777;peroxisome;0.0352847963703134!GO:0042579;microbody;0.0352847963703134!GO:0008180;signalosome;0.0359963332339864!GO:0016505;apoptotic protease activator activity;0.0361638486607528!GO:0006278;RNA-dependent DNA replication;0.0363935792928821!GO:0000178;exosome (RNase complex);0.0368579073435494!GO:0008139;nuclear localization sequence binding;0.0368655948951916!GO:0007050;cell cycle arrest;0.0368781539440509!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0369305347779849!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0372131453453888!GO:0001819;positive regulation of cytokine production;0.0374360346412499!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0374563318099102!GO:0006144;purine base metabolic process;0.037797504961307!GO:0045603;positive regulation of endothelial cell differentiation;0.037799918542166!GO:0006914;autophagy;0.0380238073892875!GO:0043596;nuclear replication fork;0.0380508028424812!GO:0016569;covalent chromatin modification;0.0383681275433933!GO:0035258;steroid hormone receptor binding;0.0384287124939876!GO:0000123;histone acetyltransferase complex;0.0384287124939876!GO:0042393;histone binding;0.0385737721116545!GO:0051091;positive regulation of transcription factor activity;0.0393581435821477!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0394830127671733!GO:0010257;NADH dehydrogenase complex assembly;0.0394830127671733!GO:0033108;mitochondrial respiratory chain complex assembly;0.0394830127671733!GO:0000090;mitotic anaphase;0.0396675469160928!GO:0051322;anaphase;0.0396675469160928!GO:0031461;cullin-RING ubiquitin ligase complex;0.0402628912747718!GO:0045309;protein phosphorylated amino acid binding;0.0403036558329289!GO:0043624;cellular protein complex disassembly;0.0406052989736479!GO:0008320;protein transmembrane transporter activity;0.041495008976637!GO:0000287;magnesium ion binding;0.0417793648252952!GO:0000119;mediator complex;0.04201747622222!GO:0050811;GABA receptor binding;0.0428212108670345!GO:0019079;viral genome replication;0.04339011268928!GO:0043022;ribosome binding;0.04339011268928!GO:0000279;M phase;0.0435341240251662!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0435485093895453!GO:0005784;translocon complex;0.0436715763453819!GO:0016570;histone modification;0.0436860075748676!GO:0001726;ruffle;0.0436860075748676!GO:0019904;protein domain specific binding;0.0437965279090144!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0437965279090144!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0441155719353098!GO:0030041;actin filament polymerization;0.0443076360157012!GO:0016791;phosphoric monoester hydrolase activity;0.0445024841906133!GO:0006919;caspase activation;0.0445759414642161!GO:0051235;maintenance of localization;0.0449708718844582!GO:0019883;antigen processing and presentation of endogenous antigen;0.045053429816512!GO:0006406;mRNA export from nucleus;0.0452105801814392!GO:0000776;kinetochore;0.0452966106443101!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.045585853799699!GO:0016023;cytoplasmic membrane-bound vesicle;0.0471320200491381!GO:0046854;phosphoinositide phosphorylation;0.0477114012814942!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0483644913580695!GO:0030132;clathrin coat of coated pit;0.0485191457950034!GO:0022884;macromolecule transmembrane transporter activity;0.0489561144679139!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0489561144679139!GO:0008213;protein amino acid alkylation;0.0491647349233919!GO:0006479;protein amino acid methylation;0.0491647349233919!GO:0000175;3'-5'-exoribonuclease activity;0.0491647349233919!GO:0046979;TAP2 binding;0.0491647349233919!GO:0046977;TAP binding;0.0491647349233919!GO:0046978;TAP1 binding;0.0491647349233919!GO:0033673;negative regulation of kinase activity;0.0492093105457536!GO:0006469;negative regulation of protein kinase activity;0.0492093105457536!GO:0032508;DNA duplex unwinding;0.0495147774290742!GO:0032392;DNA geometric change;0.0495147774290742!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0497542666002885!GO:0019058;viral infectious cycle;0.0497548521878901!GO:0043281;regulation of caspase activity;0.0497564039586292!GO:0043631;RNA polyadenylation;0.0498157324876835!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0498157324876835!GO:0003709;RNA polymerase III transcription factor activity;0.0498432236678452!GO:0046578;regulation of Ras protein signal transduction;0.0498966213929007!GO:0031901;early endosome membrane;0.0499059550653721 | |||
|sample_id=12171 | |sample_id=12171 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=ELF1,2,4:2.61595404674;RUNX1..3:2.20383771847;ETS1,2:1.99256934958;STAT1,3:1.97188228322;T:1.93866628508;RORA:1.92807866454;CDX1,2,4:1.91840967589;PAX3,7:1.81911290482;PDX1:1.81881265147;TLX2:1.74336880131;ELK1,4_GABP{A,B1}:1.70201551508;SPI1:1.53924658127;DMAP1_NCOR{1,2}_SMARC:1.46520850853;IRF1,2:1.43321843564;FOXO1,3,4:1.42082289105;FOX{D1,D2}:1.36370701289;BPTF:1.25642561142;FOX{F1,F2,J1}:1.19580346863;SPIB:1.16831211837;CRX:1.08960657501;SPZ1:1.02874485838;HMX1:1.00249159964;PAX6:0.970053676888;LEF1_TCF7_TCF7L1,2:0.959896143581;TGIF1:0.933906158903;GATA6:0.926640611615;IRF7:0.900089982234;FOXA2:0.883317902581;YY1:0.869695142044;BREu{core}:0.812060524592;IKZF2:0.783543293911;NANOG{mouse}:0.761291397099;NRF1:0.751200434955;RFX2..5_RFXANK_RFXAP:0.725299080734;ALX1:0.719608734482;NKX2-2,8:0.690274009405;PBX1:0.688285325758;RBPJ:0.649835068283;CREB1:0.642143114153;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.616605135001;FOXN1:0.515223231256;NKX6-1,2:0.497870289124;ZEB1:0.491138538896;SNAI1..3:0.434391146484;FOX{I1,J2}:0.427270761395;NKX2-1,4:0.426173313849;NFATC1..3:0.377668892244;ATF5_CREB3:0.354079493764;SREBF1,2:0.311112263413;ZNF143:0.308233819144;AR:0.308133024653;EP300:0.307518238281;VSX1,2:0.29081493884;POU1F1:0.27965378629;NFKB1_REL_RELA:0.270455856133;ADNP_IRX_SIX_ZHX:0.258359609954;MYB:0.236118256076;RXRA_VDR{dimer}:0.224227285237;CUX2:0.215851372354;MYOD1:0.198276668513;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.191427033972;PAX2:0.184313670147;AHR_ARNT_ARNT2:0.181510168171;NFIL3:0.150298897942;NR1H4:0.136135338804;SOX5:0.131035639147;ZBTB16:0.130990429159;LMO2:0.117311711012;ZNF148:0.0773151422608;GCM1,2:0.0768550632636;TAL1_TCF{3,4,12}:0.0652245653919;HBP1_HMGB_SSRP1_UBTF:0.0517315000125;PAX4:0.0361329631503;FOXQ1:0.00900339984877;PRRX1,2:-0.00380280149228;NFIX:-0.00920989100898;ATF2:-0.0404825372644;HAND1,2:-0.0406158741187;HES1:-0.056481117238;SOX2:-0.0692505990819;NR5A1,2:-0.0743522122891;OCT4_SOX2{dimer}:-0.0998630988954;TBX4,5:-0.143583115704;HOX{A6,A7,B6,B7}:-0.154193233827;HNF4A_NR2F1,2:-0.162309816894;ARID5B:-0.164285878277;HMGA1,2:-0.172422523704;NANOG:-0.214355270912;E2F1..5:-0.222350132655;FOXD3:-0.237067163987;NFE2L1:-0.252462605949;HNF1A:-0.254556792416;PAX5:-0.288856992209;NFY{A,B,C}:-0.308402777869;MYFfamily:-0.316477551412;FOXP3:-0.327884819202;STAT5{A,B}:-0.343454584308;STAT2,4,6:-0.349728489886;CEBPA,B_DDIT3:-0.365322949114;RREB1:-0.374492081794;TFAP4:-0.374693788312;EVI1:-0.384685079825;HOXA9_MEIS1:-0.395238778519;GLI1..3:-0.403398896117;SMAD1..7,9:-0.409035191697;FOSL2:-0.42860906341;NKX3-1:-0.433834295381;POU5F1:-0.435375032477;ATF4:-0.438293169336;DBP:-0.441251552661;HIF1A:-0.485854338735;GFI1:-0.491833122872;MZF1:-0.504413491182;FOXM1:-0.509188649064;FOXP1:-0.51038695666;NHLH1,2:-0.524861380156;POU2F1..3:-0.528541869526;ZNF423:-0.529379244968;FOS_FOS{B,L1}_JUN{B,D}:-0.537104719817;HLF:-0.541138527133;JUN:-0.541851320852;BACH2:-0.548371595661;ALX4:-0.562408248298;ZFP161:-0.577157966712;MAFB:-0.582701987885;RFX1:-0.584058651471;ZNF238:-0.597968412861;MTF1:-0.603697564493;ESR1:-0.604235236495;NKX2-3_NKX2-5:-0.637223330785;NR3C1:-0.637580726232;TFCP2:-0.648515190099;PAX8:-0.652787406099;EGR1..3:-0.65960508611;NFE2L2:-0.664609715675;PRDM1:-0.668568057738;MEF2{A,B,C,D}:-0.690967114811;ZNF384:-0.724534678768;REST:-0.733268633713;SRF:-0.736377805491;NFE2:-0.744578401827;AIRE:-0.759163819487;ZBTB6:-0.766259578544;MTE{core}:-0.771774438986;MAZ:-0.7923641955;PATZ1:-0.856339673064;ATF6:-0.877351696008;NKX3-2:-0.900438115443;MED-1{core}:-0.910721336324;SOX{8,9,10}:-0.927479081976;HOX{A4,D4}:-0.939924227789;KLF4:-0.940548587767;PPARG:-0.955539491772;EN1,2:-0.958594728334;GATA4:-0.974750354042;XCPE1{core}:-0.986577061945;GTF2I:-1.04401768251;GFI1B:-1.06849828988;LHX3,4:-1.07734138537;ONECUT1,2:-1.08079205182;TP53:-1.08102406996;CDC5L:-1.08688695639;SOX17:-1.10296537764;GZF1:-1.13932501365;bHLH_family:-1.14518621118;PITX1..3:-1.18814103128;XBP1:-1.2047496147;HSF1,2:-1.21848185337;TFDP1:-1.23930491077;UFEwm:-1.23958843421;MYBL2:-1.25764798431;TLX1..3_NFIC{dimer}:-1.26659151933;EBF1:-1.28156450924;POU6F1:-1.32536120879;TFAP2B:-1.35182397219;SP1:-1.37969574305;HOX{A5,B5}:-1.399650367;HIC1:-1.44018493595;RXR{A,B,G}:-1.45187709223;ESRRA:-1.53024285943;TEF:-1.5402165509;NR6A1:-1.56383186647;ZIC1..3:-1.57306779153;TEAD1:-1.60036263658;GTF2A1,2:-1.62634493817;TOPORS:-1.65507496294;TFAP2{A,C}:-1.6941455341;POU3F1..4:-1.75264425293;TBP:-1.87527690629;FOXL1:-1.8894564291;PAX1,9:-2.00030589119;IKZF1:-2.18033907288 | |top_motifs=ELF1,2,4:2.61595404674;RUNX1..3:2.20383771847;ETS1,2:1.99256934958;STAT1,3:1.97188228322;T:1.93866628508;RORA:1.92807866454;CDX1,2,4:1.91840967589;PAX3,7:1.81911290482;PDX1:1.81881265147;TLX2:1.74336880131;ELK1,4_GABP{A,B1}:1.70201551508;SPI1:1.53924658127;DMAP1_NCOR{1,2}_SMARC:1.46520850853;IRF1,2:1.43321843564;FOXO1,3,4:1.42082289105;FOX{D1,D2}:1.36370701289;BPTF:1.25642561142;FOX{F1,F2,J1}:1.19580346863;SPIB:1.16831211837;CRX:1.08960657501;SPZ1:1.02874485838;HMX1:1.00249159964;PAX6:0.970053676888;LEF1_TCF7_TCF7L1,2:0.959896143581;TGIF1:0.933906158903;GATA6:0.926640611615;IRF7:0.900089982234;FOXA2:0.883317902581;YY1:0.869695142044;BREu{core}:0.812060524592;IKZF2:0.783543293911;NANOG{mouse}:0.761291397099;NRF1:0.751200434955;RFX2..5_RFXANK_RFXAP:0.725299080734;ALX1:0.719608734482;NKX2-2,8:0.690274009405;PBX1:0.688285325758;RBPJ:0.649835068283;CREB1:0.642143114153;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.616605135001;FOXN1:0.515223231256;NKX6-1,2:0.497870289124;ZEB1:0.491138538896;SNAI1..3:0.434391146484;FOX{I1,J2}:0.427270761395;NKX2-1,4:0.426173313849;NFATC1..3:0.377668892244;ATF5_CREB3:0.354079493764;SREBF1,2:0.311112263413;ZNF143:0.308233819144;AR:0.308133024653;EP300:0.307518238281;VSX1,2:0.29081493884;POU1F1:0.27965378629;NFKB1_REL_RELA:0.270455856133;ADNP_IRX_SIX_ZHX:0.258359609954;MYB:0.236118256076;RXRA_VDR{dimer}:0.224227285237;CUX2:0.215851372354;MYOD1:0.198276668513;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.191427033972;PAX2:0.184313670147;AHR_ARNT_ARNT2:0.181510168171;NFIL3:0.150298897942;NR1H4:0.136135338804;SOX5:0.131035639147;ZBTB16:0.130990429159;LMO2:0.117311711012;ZNF148:0.0773151422608;GCM1,2:0.0768550632636;TAL1_TCF{3,4,12}:0.0652245653919;HBP1_HMGB_SSRP1_UBTF:0.0517315000125;PAX4:0.0361329631503;FOXQ1:0.00900339984877;PRRX1,2:-0.00380280149228;NFIX:-0.00920989100898;ATF2:-0.0404825372644;HAND1,2:-0.0406158741187;HES1:-0.056481117238;SOX2:-0.0692505990819;NR5A1,2:-0.0743522122891;OCT4_SOX2{dimer}:-0.0998630988954;TBX4,5:-0.143583115704;HOX{A6,A7,B6,B7}:-0.154193233827;HNF4A_NR2F1,2:-0.162309816894;ARID5B:-0.164285878277;HMGA1,2:-0.172422523704;NANOG:-0.214355270912;E2F1..5:-0.222350132655;FOXD3:-0.237067163987;NFE2L1:-0.252462605949;HNF1A:-0.254556792416;PAX5:-0.288856992209;NFY{A,B,C}:-0.308402777869;MYFfamily:-0.316477551412;FOXP3:-0.327884819202;STAT5{A,B}:-0.343454584308;STAT2,4,6:-0.349728489886;CEBPA,B_DDIT3:-0.365322949114;RREB1:-0.374492081794;TFAP4:-0.374693788312;EVI1:-0.384685079825;HOXA9_MEIS1:-0.395238778519;GLI1..3:-0.403398896117;SMAD1..7,9:-0.409035191697;FOSL2:-0.42860906341;NKX3-1:-0.433834295381;POU5F1:-0.435375032477;ATF4:-0.438293169336;DBP:-0.441251552661;HIF1A:-0.485854338735;GFI1:-0.491833122872;MZF1:-0.504413491182;FOXM1:-0.509188649064;FOXP1:-0.51038695666;NHLH1,2:-0.524861380156;POU2F1..3:-0.528541869526;ZNF423:-0.529379244968;FOS_FOS{B,L1}_JUN{B,D}:-0.537104719817;HLF:-0.541138527133;JUN:-0.541851320852;BACH2:-0.548371595661;ALX4:-0.562408248298;ZFP161:-0.577157966712;MAFB:-0.582701987885;RFX1:-0.584058651471;ZNF238:-0.597968412861;MTF1:-0.603697564493;ESR1:-0.604235236495;NKX2-3_NKX2-5:-0.637223330785;NR3C1:-0.637580726232;TFCP2:-0.648515190099;PAX8:-0.652787406099;EGR1..3:-0.65960508611;NFE2L2:-0.664609715675;PRDM1:-0.668568057738;MEF2{A,B,C,D}:-0.690967114811;ZNF384:-0.724534678768;REST:-0.733268633713;SRF:-0.736377805491;NFE2:-0.744578401827;AIRE:-0.759163819487;ZBTB6:-0.766259578544;MTE{core}:-0.771774438986;MAZ:-0.7923641955;PATZ1:-0.856339673064;ATF6:-0.877351696008;NKX3-2:-0.900438115443;MED-1{core}:-0.910721336324;SOX{8,9,10}:-0.927479081976;HOX{A4,D4}:-0.939924227789;KLF4:-0.940548587767;PPARG:-0.955539491772;EN1,2:-0.958594728334;GATA4:-0.974750354042;XCPE1{core}:-0.986577061945;GTF2I:-1.04401768251;GFI1B:-1.06849828988;LHX3,4:-1.07734138537;ONECUT1,2:-1.08079205182;TP53:-1.08102406996;CDC5L:-1.08688695639;SOX17:-1.10296537764;GZF1:-1.13932501365;bHLH_family:-1.14518621118;PITX1..3:-1.18814103128;XBP1:-1.2047496147;HSF1,2:-1.21848185337;TFDP1:-1.23930491077;UFEwm:-1.23958843421;MYBL2:-1.25764798431;TLX1..3_NFIC{dimer}:-1.26659151933;EBF1:-1.28156450924;POU6F1:-1.32536120879;TFAP2B:-1.35182397219;SP1:-1.37969574305;HOX{A5,B5}:-1.399650367;HIC1:-1.44018493595;RXR{A,B,G}:-1.45187709223;ESRRA:-1.53024285943;TEF:-1.5402165509;NR6A1:-1.56383186647;ZIC1..3:-1.57306779153;TEAD1:-1.60036263658;GTF2A1,2:-1.62634493817;TOPORS:-1.65507496294;TFAP2{A,C}:-1.6941455341;POU3F1..4:-1.75264425293;TBP:-1.87527690629;FOXL1:-1.8894564291;PAX1,9:-2.00030589119;IKZF1:-2.18033907288 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12171-128I2;search_select_hide=table117:FF:12171-128I2 | |||
}} | }} | ||
Latest revision as of 18:32, 4 June 2020
| Name: | CD8+ T Cells (pluriselect), donor090325, donation2 |
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| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12199 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12199
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12199
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.327 |
| 10 | 10 | 0.0249 |
| 100 | 100 | 0.563 |
| 101 | 101 | 0.364 |
| 102 | 102 | 0.632 |
| 103 | 103 | 0.0609 |
| 104 | 104 | 0.616 |
| 105 | 105 | 0.0941 |
| 106 | 106 | 0.574 |
| 107 | 107 | 0.0407 |
| 108 | 108 | 0.6 |
| 109 | 109 | 0.0863 |
| 11 | 11 | 0.124 |
| 110 | 110 | 0.519 |
| 111 | 111 | 0.308 |
| 112 | 112 | 0.422 |
| 113 | 113 | 0.254 |
| 114 | 114 | 0.333 |
| 115 | 115 | 0.214 |
| 116 | 116 | 0.483 |
| 117 | 117 | 0.00594 |
| 118 | 118 | 0.524 |
| 119 | 119 | 0.798 |
| 12 | 12 | 0.612 |
| 120 | 120 | 0.287 |
| 121 | 121 | 0.883 |
| 122 | 122 | 0.338 |
| 123 | 123 | 0.463 |
| 124 | 124 | 0.114 |
| 125 | 125 | 0.817 |
| 126 | 126 | 0.179 |
| 127 | 127 | 0.309 |
| 128 | 128 | 0.65 |
| 129 | 129 | 0.176 |
| 13 | 13 | 0.714 |
| 130 | 130 | 0.703 |
| 131 | 131 | 0.591 |
| 132 | 132 | 0.705 |
| 133 | 133 | 0.688 |
| 134 | 134 | 0.654 |
| 135 | 135 | 0.352 |
| 136 | 136 | 0.937 |
| 137 | 137 | 0.0884 |
| 138 | 138 | 0.223 |
| 139 | 139 | 0.0594 |
| 14 | 14 | 0.4 |
| 140 | 140 | 0.321 |
| 141 | 141 | 0.987 |
| 142 | 142 | 0.5 |
| 143 | 143 | 2.34936e-4 |
| 144 | 144 | 0.748 |
| 145 | 145 | 0.572 |
| 146 | 146 | 0.193 |
| 147 | 147 | 0.0113 |
| 148 | 148 | 0.182 |
| 149 | 149 | 0.888 |
| 15 | 15 | 0.0945 |
| 150 | 150 | 0.905 |
| 151 | 151 | 0.486 |
| 152 | 152 | 0.2 |
| 153 | 153 | 0.688 |
| 154 | 154 | 0.8 |
| 155 | 155 | 0.0599 |
| 156 | 156 | 0.739 |
| 157 | 157 | 0.373 |
| 158 | 158 | 0.245 |
| 159 | 159 | 0.13 |
| 16 | 16 | 0.949 |
| 160 | 160 | 0.906 |
| 161 | 161 | 0.255 |
| 162 | 162 | 0.119 |
| 163 | 163 | 0.758 |
| 164 | 164 | 0.429 |
| 165 | 165 | 0.456 |
| 166 | 166 | 0.638 |
| 167 | 167 | 0.515 |
| 168 | 168 | 0.0489 |
| 169 | 169 | 0.981 |
| 17 | 17 | 0.828 |
| 18 | 18 | 0.734 |
| 19 | 19 | 0.29 |
| 2 | 2 | 0.535 |
| 20 | 20 | 0.879 |
| 21 | 21 | 0.599 |
| 22 | 22 | 0.876 |
| 23 | 23 | 0.577 |
| 24 | 24 | 0.682 |
| 25 | 25 | 0.0315 |
| 26 | 26 | 0.914 |
| 27 | 27 | 0.0143 |
| 28 | 28 | 0.34 |
| 29 | 29 | 0.103 |
| 3 | 3 | 0.0533 |
| 30 | 30 | 0.726 |
| 31 | 31 | 0.838 |
| 32 | 32 | 0.0856 |
| 33 | 33 | 0.445 |
| 34 | 34 | 0.718 |
| 35 | 35 | 0.116 |
| 36 | 36 | 0.0727 |
| 37 | 37 | 0.239 |
| 38 | 38 | 0.574 |
| 39 | 39 | 0.366 |
| 4 | 4 | 0.684 |
| 40 | 40 | 0.746 |
| 41 | 41 | 0.103 |
| 42 | 42 | 0.0586 |
| 43 | 43 | 0.304 |
| 44 | 44 | 0.541 |
| 45 | 45 | 0.91 |
| 46 | 46 | 0.208 |
| 47 | 47 | 0.0996 |
| 48 | 48 | 0.19 |
| 49 | 49 | 0.207 |
| 5 | 5 | 0.142 |
| 50 | 50 | 0.465 |
| 51 | 51 | 0.569 |
| 52 | 52 | 0.186 |
| 53 | 53 | 0.31 |
| 54 | 54 | 0.629 |
| 55 | 55 | 0.298 |
| 56 | 56 | 0.598 |
| 57 | 57 | 0.84 |
| 58 | 58 | 0.0404 |
| 59 | 59 | 0.245 |
| 6 | 6 | 0.692 |
| 60 | 60 | 0.453 |
| 61 | 61 | 0.0948 |
| 62 | 62 | 0.0266 |
| 63 | 63 | 0.943 |
| 64 | 64 | 0.264 |
| 65 | 65 | 0.932 |
| 66 | 66 | 0.852 |
| 67 | 67 | 0.845 |
| 68 | 68 | 0.596 |
| 69 | 69 | 0.649 |
| 7 | 7 | 0.192 |
| 70 | 70 | 0.0402 |
| 71 | 71 | 0.17 |
| 72 | 72 | 0.0427 |
| 73 | 73 | 0.919 |
| 74 | 74 | 0.321 |
| 75 | 75 | 0.0307 |
| 76 | 76 | 0.248 |
| 77 | 77 | 0.557 |
| 78 | 78 | 0.133 |
| 79 | 79 | 0.24 |
| 8 | 8 | 0.706 |
| 80 | 80 | 0.00121 |
| 81 | 81 | 0.418 |
| 82 | 82 | 0.0663 |
| 83 | 83 | 0.731 |
| 84 | 84 | 0.661 |
| 85 | 85 | 0.592 |
| 86 | 86 | 0.182 |
| 87 | 87 | 0.728 |
| 88 | 88 | 0.625 |
| 89 | 89 | 0.889 |
| 9 | 9 | 0.392 |
| 90 | 90 | 0.0409 |
| 91 | 91 | 0.966 |
| 92 | 92 | 0.449 |
| 93 | 93 | 0.189 |
| 94 | 94 | 0.108 |
| 95 | 95 | 0.0178 |
| 96 | 96 | 0.123 |
| 97 | 97 | 0.438 |
| 98 | 98 | 0.207 |
| 99 | 99 | 0.051 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12199
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)
