FF:13230-141I8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004843 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004843 | ||
|accession_numbers=CAGE;DRX008606;DRR009478;DRZ000903;DRZ002288;DRZ012253;DRZ013638 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX036541;DRR040595;DRZ006960 | |||
|ancestors_in_anatomy_facet=UBERON:0001013,UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034,CL:0002570 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000350,FF:0000344,FF:0000329,FF:0000096,FF:0000690 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|donor= biol_rep2 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 45: | ||
|fonse_treatment_closure=EFO:0000369,FF:0000329,FF:0000690,FF:13230-141I8 | |fonse_treatment_closure=EFO:0000369,FF:0000329,FF:0000690,FF:13230-141I8 | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep2.CNhs13420.13230-141I8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep2.CNhs13420.13230-141I8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep2.CNhs13420.13230-141I8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep2.CNhs13420.13230-141I8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep2.CNhs13420.13230-141I8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:13230-141I8 | |id=FF:13230-141I8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000690 | ||
|name=mesenchymal stem cells (adipose derived), adipogenic induction | |is_obsolete= | ||
|library_id=CNhs13420 | |||
|library_id_phase_based=2:CNhs13420 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;13230 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10064.GAGTGG.13230 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;13230 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10064.GAGTGG.13230 | |||
|name=mesenchymal stem cells (adipose derived), adipogenic induction | |||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13420,LSID1023,release014,COMPLETED | |profile_hcage=CNhs13420,LSID1023,release014,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.147218037139706,0,0.14516601992939,0.136365138813858,0,0,0,0,0,0,0,0,0,0,0,0.128203955531532,0,-0.0251190548168951,0,0.064101977765766,0,0,0,0.209578170958034,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.00786831664703295,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0,0,0.278412028786497,0,0,-0.097343627213097,0.128203955531532,0,0,0,0,0,0,0,0,0,0,0,0,0.128203955531532,0,0,0,0,0,0,0,0,0,0,-0.00270524897814761,0,0,0,-0.274381939011788,-0.147095424930102,0,0.531960198069164,0,0.128203955531532,-0.0980353512377064,-0.0249465104038259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.032271616156695,0,0,0,0.0671676254263215,-0.021419427360447,0,0,0,0,0,0 | |||
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| |||
|rna_box=141 | |rna_box=141 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 55: | Line 82: | ||
|rna_sample_type= | |rna_sample_type= | ||
|rna_tube_id=141I8 | |rna_tube_id=141I8 | ||
|rna_weight_ug=5. | |rna_weight_ug=5 | ||
|rnaseq_library_id=SRhi10064.GAGTGG | |||
|sample_age=16 | |sample_age=16 | ||
|sample_category=time courses | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 98: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.65014978878048e-217!GO:0005737;cytoplasm;1.42968301383719e-182!GO:0043226;organelle;7.07184285977823e-170!GO:0043229;intracellular organelle;1.46383368123988e-169!GO:0043231;intracellular membrane-bound organelle;3.20989395981202e-166!GO:0043227;membrane-bound organelle;6.41754233329062e-166!GO:0044444;cytoplasmic part;1.40510019896436e-137!GO:0044422;organelle part;1.57902153254118e-125!GO:0044446;intracellular organelle part;4.06903417144724e-124!GO:0032991;macromolecular complex;1.46208891684311e-91!GO:0030529;ribonucleoprotein complex;7.41492587408312e-85!GO:0044237;cellular metabolic process;7.28480219225279e-77!GO:0044238;primary metabolic process;1.23384344945407e-76!GO:0005515;protein binding;3.67658980899046e-71!GO:0043170;macromolecule metabolic process;1.735504501175e-69!GO:0043233;organelle lumen;2.95105266040247e-65!GO:0031974;membrane-enclosed lumen;2.95105266040247e-65!GO:0005739;mitochondrion;3.17287736161418e-65!GO:0003723;RNA binding;2.89787304630636e-61!GO:0044428;nuclear part;1.45498182900765e-58!GO:0005634;nucleus;3.03088739336586e-57!GO:0005840;ribosome;1.01604875243863e-54!GO:0006412;translation;8.42910273381807e-51!GO:0003735;structural constituent of ribosome;5.09708197156609e-49!GO:0031090;organelle membrane;9.23845445666209e-48!GO:0043234;protein complex;4.55304721229743e-45!GO:0019538;protein metabolic process;6.86138228622164e-45!GO:0016043;cellular component organization and biogenesis;3.62899758416995e-43!GO:0033279;ribosomal subunit;1.28731681847935e-42!GO:0044429;mitochondrial part;1.66912549256123e-42!GO:0009058;biosynthetic process;3.84699830192953e-42!GO:0015031;protein transport;1.43718624890877e-41!GO:0005829;cytosol;4.24742035962189e-41!GO:0006396;RNA processing;1.50586563201049e-40!GO:0044249;cellular biosynthetic process;2.7373091318845e-40!GO:0033036;macromolecule localization;3.14885601637454e-40!GO:0044260;cellular macromolecule metabolic process;1.93262881834502e-39!GO:0009059;macromolecule biosynthetic process;3.21597148701958e-39!GO:0045184;establishment of protein localization;1.58664011670833e-38!GO:0044267;cellular protein metabolic process;2.09955831930539e-38!GO:0008104;protein localization;9.11857796149893e-38!GO:0010467;gene expression;1.08211286272564e-36!GO:0031981;nuclear lumen;3.86809758731079e-36!GO:0031967;organelle envelope;6.87235824000289e-35!GO:0031975;envelope;1.58268517179317e-34!GO:0016071;mRNA metabolic process;4.66523056586142e-33!GO:0043283;biopolymer metabolic process;7.23515159443234e-32!GO:0046907;intracellular transport;9.97411520778335e-32!GO:0008380;RNA splicing;2.95483830754769e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.94127522144529e-31!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.26402220076869e-30!GO:0065003;macromolecular complex assembly;3.25472850170653e-29!GO:0006397;mRNA processing;6.18400618427841e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.32425266824542e-28!GO:0006886;intracellular protein transport;3.09287904216567e-27!GO:0022607;cellular component assembly;1.12536405704482e-26!GO:0005740;mitochondrial envelope;1.13707044617854e-26!GO:0043228;non-membrane-bound organelle;5.61691244381121e-26!GO:0043232;intracellular non-membrane-bound organelle;5.61691244381121e-26!GO:0031966;mitochondrial membrane;3.20953128162317e-25!GO:0006996;organelle organization and biogenesis;4.37197797830694e-25!GO:0019866;organelle inner membrane;2.13241667699436e-24!GO:0044445;cytosolic part;2.13241667699436e-24!GO:0005743;mitochondrial inner membrane;2.16257448997891e-23!GO:0005681;spliceosome;1.01638754786455e-22!GO:0006119;oxidative phosphorylation;2.29206868735467e-22!GO:0015935;small ribosomal subunit;3.12265064927264e-22!GO:0005654;nucleoplasm;6.56399134711781e-22!GO:0005783;endoplasmic reticulum;1.18174299810278e-21!GO:0015934;large ribosomal subunit;1.7738834090039e-21!GO:0044455;mitochondrial membrane part;3.63217116442861e-21!GO:0006457;protein folding;4.66366099501868e-21!GO:0012505;endomembrane system;1.9698472289415e-19!GO:0022618;protein-RNA complex assembly;3.46400381321689e-19!GO:0031980;mitochondrial lumen;4.51811935280385e-19!GO:0005759;mitochondrial matrix;4.51811935280385e-19!GO:0051649;establishment of cellular localization;9.52217949502964e-19!GO:0051641;cellular localization;1.04263970181373e-18!GO:0048770;pigment granule;1.07295721126707e-18!GO:0042470;melanosome;1.07295721126707e-18!GO:0003676;nucleic acid binding;1.89628957474705e-18!GO:0044451;nucleoplasm part;9.48727527595172e-18!GO:0005746;mitochondrial respiratory chain;1.02960482126121e-17!GO:0044432;endoplasmic reticulum part;1.04790357245263e-17!GO:0016462;pyrophosphatase activity;1.13298591264217e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.25116278066961e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;1.81257289680346e-17!GO:0006259;DNA metabolic process;4.80074199448773e-17!GO:0017111;nucleoside-triphosphatase activity;5.33503243630418e-17!GO:0008134;transcription factor binding;1.20229423760555e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.58637611502798e-16!GO:0008135;translation factor activity, nucleic acid binding;1.62667729450521e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.61705215728738e-16!GO:0051186;cofactor metabolic process;2.744019971328e-16!GO:0000502;proteasome complex (sensu Eukaryota);4.01615621669859e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.19183729834949e-15!GO:0003954;NADH dehydrogenase activity;1.19183729834949e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.19183729834949e-15!GO:0005761;mitochondrial ribosome;1.24894096731379e-15!GO:0000313;organellar ribosome;1.24894096731379e-15!GO:0005730;nucleolus;2.70212020870741e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.12566907085215e-15!GO:0005794;Golgi apparatus;7.79338901200076e-15!GO:0016874;ligase activity;1.45188358940105e-14!GO:0048193;Golgi vesicle transport;1.68152885750481e-14!GO:0000166;nucleotide binding;1.68777154734488e-14!GO:0016070;RNA metabolic process;2.17399916963721e-14!GO:0051082;unfolded protein binding;2.89860952689176e-14!GO:0043285;biopolymer catabolic process;3.32574604631493e-14!GO:0006605;protein targeting;3.77461903730014e-14!GO:0030964;NADH dehydrogenase complex (quinone);9.70570071491736e-14!GO:0045271;respiratory chain complex I;9.70570071491736e-14!GO:0005747;mitochondrial respiratory chain complex I;9.70570071491736e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.28293931121424e-13!GO:0042773;ATP synthesis coupled electron transport;1.28293931121424e-13!GO:0044265;cellular macromolecule catabolic process;1.47137412504595e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.87179002439512e-13!GO:0006512;ubiquitin cycle;2.22814850838957e-13!GO:0003743;translation initiation factor activity;2.40944410386402e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.01585526224975e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;3.31686203963018e-13!GO:0009057;macromolecule catabolic process;6.11314406953205e-13!GO:0019941;modification-dependent protein catabolic process;6.46570093374606e-13!GO:0043632;modification-dependent macromolecule catabolic process;6.46570093374606e-13!GO:0006413;translational initiation;7.277965943269e-13!GO:0044257;cellular protein catabolic process;8.27945447378165e-13!GO:0006511;ubiquitin-dependent protein catabolic process;9.59236763442792e-13!GO:0006732;coenzyme metabolic process;1.01625497289375e-12!GO:0030163;protein catabolic process;1.30571830533393e-12!GO:0007049;cell cycle;2.41976780061182e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;2.5919791563412e-12!GO:0000375;RNA splicing, via transesterification reactions;2.5919791563412e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.5919791563412e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.86159295927461e-12!GO:0016192;vesicle-mediated transport;3.08359922361352e-12!GO:0044248;cellular catabolic process;6.18541614834293e-12!GO:0005789;endoplasmic reticulum membrane;7.92232556071432e-12!GO:0005793;ER-Golgi intermediate compartment;9.27461903030004e-12!GO:0009055;electron carrier activity;3.75226225905825e-11!GO:0003712;transcription cofactor activity;1.27204054735077e-10!GO:0006446;regulation of translational initiation;1.46222497161391e-10!GO:0042254;ribosome biogenesis and assembly;2.15992390110049e-10!GO:0009259;ribonucleotide metabolic process;1.15382057237357e-09!GO:0032553;ribonucleotide binding;1.17549731283996e-09!GO:0032555;purine ribonucleotide binding;1.17549731283996e-09!GO:0016491;oxidoreductase activity;1.22458722210404e-09!GO:0017076;purine nucleotide binding;1.26813307301463e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.73481620177535e-09!GO:0006974;response to DNA damage stimulus;1.85023779182655e-09!GO:0006163;purine nucleotide metabolic process;2.30279682866899e-09!GO:0016604;nuclear body;3.07191222181892e-09!GO:0009150;purine ribonucleotide metabolic process;3.68212567058044e-09!GO:0005635;nuclear envelope;4.40591380113797e-09!GO:0022402;cell cycle process;5.9703277553205e-09!GO:0048523;negative regulation of cellular process;8.71814402218498e-09!GO:0009260;ribonucleotide biosynthetic process;9.97264231585531e-09!GO:0006164;purine nucleotide biosynthetic process;1.02466065361066e-08!GO:0006366;transcription from RNA polymerase II promoter;1.19872795737049e-08!GO:0006913;nucleocytoplasmic transport;1.19872795737049e-08!GO:0009060;aerobic respiration;1.27596886429734e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.36233874610966e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.5943981173728e-08!GO:0045333;cellular respiration;1.75948905270848e-08!GO:0008565;protein transporter activity;1.83246116992342e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.96072594461567e-08!GO:0005788;endoplasmic reticulum lumen;2.01419057816216e-08!GO:0016887;ATPase activity;2.16452271588967e-08!GO:0031965;nuclear membrane;2.21110395154309e-08!GO:0051169;nuclear transport;2.31803784872861e-08!GO:0009199;ribonucleoside triphosphate metabolic process;2.60108813468414e-08!GO:0009141;nucleoside triphosphate metabolic process;2.73517661726954e-08!GO:0042623;ATPase activity, coupled;2.76735504082074e-08!GO:0030120;vesicle coat;2.9372868459854e-08!GO:0030662;coated vesicle membrane;2.9372868459854e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.1239067061153e-08!GO:0009144;purine nucleoside triphosphate metabolic process;3.1239067061153e-08!GO:0006399;tRNA metabolic process;4.06425967646315e-08!GO:0015986;ATP synthesis coupled proton transport;4.45974655952117e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.45974655952117e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.49894718342355e-08!GO:0006461;protein complex assembly;5.96880597329812e-08!GO:0019787;small conjugating protein ligase activity;6.26387641383738e-08!GO:0000278;mitotic cell cycle;7.32184747548212e-08!GO:0003924;GTPase activity;7.88219258859868e-08!GO:0008639;small protein conjugating enzyme activity;7.96841753690277e-08!GO:0012501;programmed cell death;8.53033983172735e-08!GO:0017038;protein import;8.59834027638967e-08!GO:0046034;ATP metabolic process;8.93298555541574e-08!GO:0016607;nuclear speck;8.93298555541574e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.08695338749389e-07!GO:0004842;ubiquitin-protein ligase activity;1.29059254814249e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.36862978660878e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.45685688003856e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.45685688003856e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.45685688003856e-07!GO:0006915;apoptosis;1.46712174231445e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;1.47566645680364e-07!GO:0019829;cation-transporting ATPase activity;1.66495374469413e-07!GO:0009056;catabolic process;1.72132462292105e-07!GO:0051188;cofactor biosynthetic process;1.83996788967158e-07!GO:0043038;amino acid activation;1.85066873966046e-07!GO:0006418;tRNA aminoacylation for protein translation;1.85066873966046e-07!GO:0043039;tRNA aminoacylation;1.85066873966046e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.90289578617495e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.00727006433892e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.00727006433892e-07!GO:0044453;nuclear membrane part;2.06711729780924e-07!GO:0005524;ATP binding;2.14080026340472e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.3863456751594e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.3863456751594e-07!GO:0048475;coated membrane;2.3863456751594e-07!GO:0030117;membrane coat;2.3863456751594e-07!GO:0043412;biopolymer modification;2.41471872887495e-07!GO:0051187;cofactor catabolic process;3.02309871511678e-07!GO:0006281;DNA repair;3.16716870435908e-07!GO:0006099;tricarboxylic acid cycle;3.63793872159617e-07!GO:0046356;acetyl-CoA catabolic process;3.63793872159617e-07!GO:0008219;cell death;3.78968017437371e-07!GO:0016265;death;3.78968017437371e-07!GO:0006323;DNA packaging;3.9336348430607e-07!GO:0048519;negative regulation of biological process;3.9824720202305e-07!GO:0051276;chromosome organization and biogenesis;3.99364421509166e-07!GO:0032559;adenyl ribonucleotide binding;4.35074461554578e-07!GO:0009719;response to endogenous stimulus;4.65769770921208e-07!GO:0005839;proteasome core complex (sensu Eukaryota);4.8014422880117e-07!GO:0030554;adenyl nucleotide binding;5.50748749044184e-07!GO:0006754;ATP biosynthetic process;5.82197232512365e-07!GO:0006753;nucleoside phosphate metabolic process;5.82197232512365e-07!GO:0065004;protein-DNA complex assembly;5.84959238496248e-07!GO:0051246;regulation of protein metabolic process;5.97849323317122e-07!GO:0008026;ATP-dependent helicase activity;6.10339884286194e-07!GO:0005768;endosome;6.30413867392003e-07!GO:0016881;acid-amino acid ligase activity;6.67227421492768e-07!GO:0009109;coenzyme catabolic process;6.69963973895894e-07!GO:0051726;regulation of cell cycle;6.81594474358742e-07!GO:0000074;regulation of progression through cell cycle;6.92687718697636e-07!GO:0044431;Golgi apparatus part;9.01442392008554e-07!GO:0016564;transcription repressor activity;9.18617610772787e-07!GO:0004386;helicase activity;9.19905814276871e-07!GO:0009117;nucleotide metabolic process;9.70575292573308e-07!GO:0003714;transcription corepressor activity;1.01825157657598e-06!GO:0006084;acetyl-CoA metabolic process;1.02394131076143e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.24242173094138e-06!GO:0050794;regulation of cellular process;1.44573641786104e-06!GO:0006464;protein modification process;1.85239665754929e-06!GO:0006364;rRNA processing;2.15333303054246e-06!GO:0065002;intracellular protein transport across a membrane;2.39988031244438e-06!GO:0016853;isomerase activity;2.5021516245379e-06!GO:0031324;negative regulation of cellular metabolic process;2.51945328872294e-06!GO:0043566;structure-specific DNA binding;2.90159520470837e-06!GO:0016072;rRNA metabolic process;3.39077945793007e-06!GO:0045259;proton-transporting ATP synthase complex;3.51399725094349e-06!GO:0006091;generation of precursor metabolites and energy;3.60253178865228e-06!GO:0004298;threonine endopeptidase activity;3.75300430753535e-06!GO:0005694;chromosome;3.81431727124632e-06!GO:0003697;single-stranded DNA binding;3.83117560799553e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.31491152733092e-06!GO:0006333;chromatin assembly or disassembly;4.71712505097231e-06!GO:0000245;spliceosome assembly;5.34989641392455e-06!GO:0005798;Golgi-associated vesicle;5.36032317126497e-06!GO:0008361;regulation of cell size;5.36032317126497e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.68546747046858e-06!GO:0016049;cell growth;6.11878105221715e-06!GO:0005762;mitochondrial large ribosomal subunit;6.33198902479101e-06!GO:0000315;organellar large ribosomal subunit;6.33198902479101e-06!GO:0005643;nuclear pore;6.50966625011847e-06!GO:0009108;coenzyme biosynthetic process;6.53018915571873e-06!GO:0006752;group transfer coenzyme metabolic process;8.62905311001018e-06!GO:0051789;response to protein stimulus;9.23976390230932e-06!GO:0006986;response to unfolded protein;9.23976390230932e-06!GO:0007005;mitochondrion organization and biogenesis;9.47871682413199e-06!GO:0031988;membrane-bound vesicle;1.00424825372849e-05!GO:0044440;endosomal part;1.00424825372849e-05!GO:0010008;endosome membrane;1.00424825372849e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.01017087649729e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.06585847046336e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.14422639394512e-05!GO:0016859;cis-trans isomerase activity;1.27065097568642e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.40567915722798e-05!GO:0044427;chromosomal part;1.43907604189873e-05!GO:0006260;DNA replication;1.58098078537717e-05!GO:0006613;cotranslational protein targeting to membrane;1.71827858960557e-05!GO:0031252;leading edge;1.72052367669306e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.7786276542078e-05!GO:0000785;chromatin;1.7786276542078e-05!GO:0032446;protein modification by small protein conjugation;2.14029155067569e-05!GO:0005667;transcription factor complex;2.15773721315485e-05!GO:0006334;nucleosome assembly;2.3119133041719e-05!GO:0009892;negative regulation of metabolic process;2.389215710868e-05!GO:0043687;post-translational protein modification;2.59059600405684e-05!GO:0000151;ubiquitin ligase complex;2.59059600405684e-05!GO:0045786;negative regulation of progression through cell cycle;2.73780207713403e-05!GO:0005525;GTP binding;2.74229808210813e-05!GO:0005770;late endosome;2.76335137733417e-05!GO:0019843;rRNA binding;2.85590507583595e-05!GO:0001558;regulation of cell growth;2.86472884766141e-05!GO:0051170;nuclear import;3.03439034399405e-05!GO:0016567;protein ubiquitination;3.52251187920666e-05!GO:0042981;regulation of apoptosis;3.63057064595309e-05!GO:0043067;regulation of programmed cell death;3.7212118610756e-05!GO:0000087;M phase of mitotic cell cycle;3.81676354111928e-05!GO:0046930;pore complex;3.84993205805133e-05!GO:0000139;Golgi membrane;4.2519454471444e-05!GO:0000314;organellar small ribosomal subunit;4.33737025908864e-05!GO:0005763;mitochondrial small ribosomal subunit;4.33737025908864e-05!GO:0007067;mitosis;4.38219416353625e-05!GO:0031982;vesicle;4.77514430252269e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.87430426903373e-05!GO:0015980;energy derivation by oxidation of organic compounds;4.89797108237835e-05!GO:0016787;hydrolase activity;5.10948288841837e-05!GO:0006606;protein import into nucleus;5.14530294680364e-05!GO:0005773;vacuole;5.32065777638786e-05!GO:0031497;chromatin assembly;5.58430581149764e-05!GO:0031410;cytoplasmic vesicle;5.67542135656912e-05!GO:0045454;cell redox homeostasis;5.68937113624052e-05!GO:0030133;transport vesicle;5.9189229008318e-05!GO:0043069;negative regulation of programmed cell death;5.93273056182054e-05!GO:0050657;nucleic acid transport;6.50448952581392e-05!GO:0051236;establishment of RNA localization;6.50448952581392e-05!GO:0050658;RNA transport;6.50448952581392e-05!GO:0008654;phospholipid biosynthetic process;6.87776342933891e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;6.96305263414432e-05!GO:0005905;coated pit;7.30826542804858e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.8755024322066e-05!GO:0006403;RNA localization;8.2097345136137e-05!GO:0043066;negative regulation of apoptosis;8.29546077809205e-05!GO:0022403;cell cycle phase;8.33519607611776e-05!GO:0006916;anti-apoptosis;8.40035030375204e-05!GO:0016481;negative regulation of transcription;8.55186758097411e-05!GO:0043021;ribonucleoprotein binding;8.65497568932354e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;8.89763431718794e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;9.94138317786897e-05!GO:0016563;transcription activator activity;0.000100756801253365!GO:0003713;transcription coactivator activity;0.000102412648976993!GO:0003724;RNA helicase activity;0.000118348036934874!GO:0015630;microtubule cytoskeleton;0.000126011194101275!GO:0030029;actin filament-based process;0.000135419009435614!GO:0030867;rough endoplasmic reticulum membrane;0.000138675132953773!GO:0051301;cell division;0.000187639869030831!GO:0033116;ER-Golgi intermediate compartment membrane;0.000205872754834813!GO:0005769;early endosome;0.000223606893052166!GO:0032561;guanyl ribonucleotide binding;0.000223606893052166!GO:0019001;guanyl nucleotide binding;0.000223606893052166!GO:0006612;protein targeting to membrane;0.000243153028656567!GO:0051427;hormone receptor binding;0.000244117815252538!GO:0005048;signal sequence binding;0.000250031812316909!GO:0050789;regulation of biological process;0.000250834073125548!GO:0030663;COPI coated vesicle membrane;0.000251563187732019!GO:0030126;COPI vesicle coat;0.000251563187732019!GO:0000323;lytic vacuole;0.000257065089747139!GO:0005764;lysosome;0.000257065089747139!GO:0005813;centrosome;0.000260762970794667!GO:0005885;Arp2/3 protein complex;0.000267986315495697!GO:0008092;cytoskeletal protein binding;0.000329425621271076!GO:0016779;nucleotidyltransferase activity;0.000339067469706287!GO:0007010;cytoskeleton organization and biogenesis;0.000349492431343028!GO:0008250;oligosaccharyl transferase complex;0.0003869883224668!GO:0016568;chromatin modification;0.000393756151634331!GO:0019867;outer membrane;0.000473735472154461!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000483055908612321!GO:0035257;nuclear hormone receptor binding;0.000487879264892718!GO:0004576;oligosaccharyl transferase activity;0.000531231404062328!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000532180565047675!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000621041408841396!GO:0030137;COPI-coated vesicle;0.000630535636830348!GO:0031968;organelle outer membrane;0.000656275482265361!GO:0009165;nucleotide biosynthetic process;0.000656275482265361!GO:0043623;cellular protein complex assembly;0.000662426707495875!GO:0005815;microtubule organizing center;0.00069098253226185!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000695694896216434!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000716893554870258!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00071944658451308!GO:0005791;rough endoplasmic reticulum;0.000768281653837434!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000805161954447433!GO:0007050;cell cycle arrest;0.000855099499673833!GO:0044262;cellular carbohydrate metabolic process;0.000862978747235412!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000868508044246187!GO:0006891;intra-Golgi vesicle-mediated transport;0.000910690655101306!GO:0051920;peroxiredoxin activity;0.000919169529094064!GO:0051028;mRNA transport;0.000967202305949981!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00105428726251352!GO:0018196;peptidyl-asparagine modification;0.00106226614664767!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00106226614664767!GO:0043681;protein import into mitochondrion;0.00107452073229766!GO:0004177;aminopeptidase activity;0.00124287526559447!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00128820684762249!GO:0015399;primary active transmembrane transporter activity;0.00128820684762249!GO:0019222;regulation of metabolic process;0.00129782618155327!GO:0008186;RNA-dependent ATPase activity;0.00130383630058759!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00137375396696869!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00137375396696869!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00137375396696869!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0013964783517269!GO:0040008;regulation of growth;0.00151900721652832!GO:0003899;DNA-directed RNA polymerase activity;0.00162777361009286!GO:0043284;biopolymer biosynthetic process;0.00169628047800796!GO:0016363;nuclear matrix;0.00171521111482453!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00186952770017929!GO:0003690;double-stranded DNA binding;0.00192496690022045!GO:0016126;sterol biosynthetic process;0.00197596350776066!GO:0051329;interphase of mitotic cell cycle;0.0020316137543153!GO:0046474;glycerophospholipid biosynthetic process;0.00204941994256045!GO:0005741;mitochondrial outer membrane;0.00207446497579371!GO:0019752;carboxylic acid metabolic process;0.0022379071545596!GO:0019899;enzyme binding;0.00235819382798222!GO:0006414;translational elongation;0.00238384221268894!GO:0048522;positive regulation of cellular process;0.00246643519174693!GO:0006082;organic acid metabolic process;0.00249740651716594!GO:0030658;transport vesicle membrane;0.0027585139873873!GO:0031072;heat shock protein binding;0.00278802531534713!GO:0048500;signal recognition particle;0.00278802531534713!GO:0008180;signalosome;0.00279010600455245!GO:0048471;perinuclear region of cytoplasm;0.00279010600455245!GO:0006626;protein targeting to mitochondrion;0.00291135349945328!GO:0051325;interphase;0.00306425428850552!GO:0030132;clathrin coat of coated pit;0.00316776291794694!GO:0016740;transferase activity;0.00341835043877141!GO:0006793;phosphorus metabolic process;0.00342459390492692!GO:0006796;phosphate metabolic process;0.00342459390492692!GO:0004004;ATP-dependent RNA helicase activity;0.00342716829085734!GO:0003729;mRNA binding;0.00351296961037409!GO:0051252;regulation of RNA metabolic process;0.00372823283415389!GO:0043433;negative regulation of transcription factor activity;0.00393978535916401!GO:0008610;lipid biosynthetic process;0.00396001741503036!GO:0000279;M phase;0.00401213239972645!GO:0022890;inorganic cation transmembrane transporter activity;0.00409539121232073!GO:0046483;heterocycle metabolic process;0.00410935272735993!GO:0016310;phosphorylation;0.00433253261125023!GO:0000786;nucleosome;0.00434227846129943!GO:0016197;endosome transport;0.00434227846129943!GO:0007006;mitochondrial membrane organization and biogenesis;0.00445373264330384!GO:0051168;nuclear export;0.0045623819698177!GO:0043488;regulation of mRNA stability;0.00463715225768922!GO:0043487;regulation of RNA stability;0.00463715225768922!GO:0051087;chaperone binding;0.00472632043906466!GO:0006979;response to oxidative stress;0.0048020533867519!GO:0030134;ER to Golgi transport vesicle;0.00506276907594867!GO:0016044;membrane organization and biogenesis;0.00513686786024577!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00553498676288575!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00553498676288575!GO:0051128;regulation of cellular component organization and biogenesis;0.00558537067828974!GO:0045892;negative regulation of transcription, DNA-dependent;0.00558923454481609!GO:0030027;lamellipodium;0.00582265561331996!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00591949177585278!GO:0045047;protein targeting to ER;0.00591949177585278!GO:0003746;translation elongation factor activity;0.00606085645013651!GO:0005869;dynactin complex;0.00606085645013651!GO:0046489;phosphoinositide biosynthetic process;0.00608177954407652!GO:0008154;actin polymerization and/or depolymerization;0.00622333678265381!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0063905721907895!GO:0030659;cytoplasmic vesicle membrane;0.00664761773593608!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00664761773593608!GO:0015002;heme-copper terminal oxidase activity;0.00664761773593608!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00664761773593608!GO:0004129;cytochrome-c oxidase activity;0.00664761773593608!GO:0015992;proton transport;0.00667580903859431!GO:0005684;U2-dependent spliceosome;0.00667621155311451!GO:0008652;amino acid biosynthetic process;0.00673379796537543!GO:0006839;mitochondrial transport;0.00675067192999389!GO:0017166;vinculin binding;0.00677829428805816!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00685877668360033!GO:0030521;androgen receptor signaling pathway;0.00711385011617238!GO:0031418;L-ascorbic acid binding;0.00724737273585275!GO:0030127;COPII vesicle coat;0.00724737273585275!GO:0012507;ER to Golgi transport vesicle membrane;0.00724737273585275!GO:0000049;tRNA binding;0.00724913656585711!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00735934084322443!GO:0007243;protein kinase cascade;0.00749241421682379!GO:0030176;integral to endoplasmic reticulum membrane;0.00749241421682379!GO:0035258;steroid hormone receptor binding;0.0076442712547671!GO:0030660;Golgi-associated vesicle membrane;0.00764462837245564!GO:0006818;hydrogen transport;0.00764791168017224!GO:0016272;prefoldin complex;0.00799185760736826!GO:0008312;7S RNA binding;0.0080026502309763!GO:0030118;clathrin coat;0.00802576732488897!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00812802390586235!GO:0031543;peptidyl-proline dioxygenase activity;0.00840745179567896!GO:0005583;fibrillar collagen;0.00855299228037332!GO:0003711;transcription elongation regulator activity;0.00882900429277773!GO:0019798;procollagen-proline dioxygenase activity;0.00923901222581685!GO:0030041;actin filament polymerization;0.00971961754507752!GO:0030880;RNA polymerase complex;0.0100798333453164!GO:0006740;NADPH regeneration;0.0106907911213774!GO:0006098;pentose-phosphate shunt;0.0106907911213774!GO:0048487;beta-tubulin binding;0.0106907911213774!GO:0016408;C-acyltransferase activity;0.0108668667261959!GO:0006402;mRNA catabolic process;0.0109872853445517!GO:0044420;extracellular matrix part;0.0110619439620756!GO:0001527;microfibril;0.0112846273729407!GO:0009112;nucleobase metabolic process;0.0116726201389344!GO:0051287;NAD binding;0.0119244709087656!GO:0008139;nuclear localization sequence binding;0.0119280697271892!GO:0043022;ribosome binding;0.0119491945129031!GO:0006383;transcription from RNA polymerase III promoter;0.0123297635146989!GO:0043492;ATPase activity, coupled to movement of substances;0.0126341341615091!GO:0001726;ruffle;0.0126396990682459!GO:0005581;collagen;0.0127886720950589!GO:0051539;4 iron, 4 sulfur cluster binding;0.0130428343010984!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0132681791384231!GO:0008047;enzyme activator activity;0.0133651344433024!GO:0031902;late endosome membrane;0.0139783786307227!GO:0006650;glycerophospholipid metabolic process;0.0142062746373653!GO:0015631;tubulin binding;0.0142155070470299!GO:0005819;spindle;0.014731299619889!GO:0006118;electron transport;0.0148728046722497!GO:0007040;lysosome organization and biogenesis;0.0151695365377845!GO:0000059;protein import into nucleus, docking;0.0151907280764218!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.015449511002196!GO:0003779;actin binding;0.015449511002196!GO:0044452;nucleolar part;0.0155902213710924!GO:0051101;regulation of DNA binding;0.015648500539753!GO:0005862;muscle thin filament tropomyosin;0.0157291382063137!GO:0005586;collagen type III;0.0157408160410655!GO:0030518;steroid hormone receptor signaling pathway;0.0159218765619784!GO:0031901;early endosome membrane;0.0159418488143331!GO:0007264;small GTPase mediated signal transduction;0.0159473911544838!GO:0031529;ruffle organization and biogenesis;0.0164135366654165!GO:0006509;membrane protein ectodomain proteolysis;0.0167341661944948!GO:0033619;membrane protein proteolysis;0.0167341661944948!GO:0030125;clathrin vesicle coat;0.0168696423856347!GO:0030665;clathrin coated vesicle membrane;0.0168696423856347!GO:0006790;sulfur metabolic process;0.017319689047342!GO:0008033;tRNA processing;0.0175435622193324!GO:0006778;porphyrin metabolic process;0.0180778606627499!GO:0033013;tetrapyrrole metabolic process;0.0180778606627499!GO:0006354;RNA elongation;0.0181174891048148!GO:0000096;sulfur amino acid metabolic process;0.0182148731509947!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0194569204311608!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0197834183708777!GO:0000428;DNA-directed RNA polymerase complex;0.0197834183708777!GO:0006289;nucleotide-excision repair;0.0199528981996033!GO:0065009;regulation of a molecular function;0.0199980813532594!GO:0046467;membrane lipid biosynthetic process;0.0200371917794778!GO:0016251;general RNA polymerase II transcription factor activity;0.0206969672181361!GO:0065007;biological regulation;0.0206969672181361!GO:0044433;cytoplasmic vesicle part;0.0209941251813054!GO:0050681;androgen receptor binding;0.0209941251813054!GO:0022408;negative regulation of cell-cell adhesion;0.0214205347072965!GO:0006401;RNA catabolic process;0.0215568612646365!GO:0050662;coenzyme binding;0.0215581361244129!GO:0003756;protein disulfide isomerase activity;0.0217966683301483!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0217966683301483!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0220126429212139!GO:0006497;protein amino acid lipidation;0.0222185259955963!GO:0007021;tubulin folding;0.0223384719351322!GO:0032984;macromolecular complex disassembly;0.0223404242749177!GO:0005832;chaperonin-containing T-complex;0.0223991348369153!GO:0006595;polyamine metabolic process;0.0224429367997868!GO:0045792;negative regulation of cell size;0.0224919283536368!GO:0000339;RNA cap binding;0.0225962470348495!GO:0045893;positive regulation of transcription, DNA-dependent;0.0228624088665765!GO:0006892;post-Golgi vesicle-mediated transport;0.0228624088665765!GO:0035035;histone acetyltransferase binding;0.0231163751873494!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.023356557546296!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.023356557546296!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0239007235884051!GO:0000209;protein polyubiquitination;0.0240593302352729!GO:0030833;regulation of actin filament polymerization;0.024500139488914!GO:0008022;protein C-terminus binding;0.0248656045123369!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0250209541200724!GO:0003702;RNA polymerase II transcription factor activity;0.0251472198916031!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0253445881892932!GO:0030308;negative regulation of cell growth;0.0255357639925979!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0255409166960458!GO:0003684;damaged DNA binding;0.0256403098213113!GO:0016860;intramolecular oxidoreductase activity;0.0256653394896384!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.02579059917233!GO:0033043;regulation of organelle organization and biogenesis;0.02579059917233!GO:0006695;cholesterol biosynthetic process;0.0264930141946684!GO:0007034;vacuolar transport;0.0264930141946684!GO:0045941;positive regulation of transcription;0.0266929382174538!GO:0012506;vesicle membrane;0.0268001804360294!GO:0003678;DNA helicase activity;0.027204719431492!GO:0051540;metal cluster binding;0.0278106406720822!GO:0051536;iron-sulfur cluster binding;0.0278106406720822!GO:0042168;heme metabolic process;0.0287658229242532!GO:0042802;identical protein binding;0.0293652936074516!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0301962265929156!GO:0000082;G1/S transition of mitotic cell cycle;0.0307676020812469!GO:0006520;amino acid metabolic process;0.0309247480397938!GO:0031272;regulation of pseudopodium formation;0.0309247480397938!GO:0031269;pseudopodium formation;0.0309247480397938!GO:0031344;regulation of cell projection organization and biogenesis;0.0309247480397938!GO:0031268;pseudopodium organization and biogenesis;0.0309247480397938!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0309247480397938!GO:0031274;positive regulation of pseudopodium formation;0.0309247480397938!GO:0006352;transcription initiation;0.0310113861217582!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0311217010723746!GO:0007033;vacuole organization and biogenesis;0.0311944740945257!GO:0006693;prostaglandin metabolic process;0.0313416518486092!GO:0006692;prostanoid metabolic process;0.0313416518486092!GO:0008320;protein transmembrane transporter activity;0.031556056216869!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0317546091949717!GO:0010257;NADH dehydrogenase complex assembly;0.0317546091949717!GO:0033108;mitochondrial respiratory chain complex assembly;0.0317546091949717!GO:0045936;negative regulation of phosphate metabolic process;0.0322138586698185!GO:0045045;secretory pathway;0.0325187474653533!GO:0009116;nucleoside metabolic process;0.0326187736366136!GO:0001953;negative regulation of cell-matrix adhesion;0.0326581093889101!GO:0030119;AP-type membrane coat adaptor complex;0.0333780817061985!GO:0030508;thiol-disulfide exchange intermediate activity;0.0341197472819514!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0341918798522895!GO:0004228;gelatinase A activity;0.0342222821337722!GO:0001955;blood vessel maturation;0.0342222821337722!GO:0050811;GABA receptor binding;0.0352655993327736!GO:0022884;macromolecule transmembrane transporter activity;0.0358802021576664!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0358802021576664!GO:0006739;NADP metabolic process;0.0358925007148029!GO:0033673;negative regulation of kinase activity;0.0359068118459366!GO:0006469;negative regulation of protein kinase activity;0.0359068118459366!GO:0006506;GPI anchor biosynthetic process;0.035926915413275!GO:0006376;mRNA splice site selection;0.0360766724799222!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0360766724799222!GO:0006144;purine base metabolic process;0.0363347453907426!GO:0043624;cellular protein complex disassembly;0.0370382400351076!GO:0005801;cis-Golgi network;0.0375537920949793!GO:0043241;protein complex disassembly;0.0378128511778859!GO:0031124;mRNA 3'-end processing;0.0382217012392869!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0386065335427413!GO:0031371;ubiquitin conjugating enzyme complex;0.0395298678444773!GO:0048518;positive regulation of biological process;0.040737622810664!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.041195815557279!GO:0048144;fibroblast proliferation;0.0412483419067264!GO:0048145;regulation of fibroblast proliferation;0.0412483419067264!GO:0030384;phosphoinositide metabolic process;0.0413078895368312!GO:0006417;regulation of translation;0.0417125729453322!GO:0006261;DNA-dependent DNA replication;0.0421675100878431!GO:0031323;regulation of cellular metabolic process;0.0421675100878431!GO:0006302;double-strand break repair;0.0421675100878431!GO:0006505;GPI anchor metabolic process;0.043200786122747!GO:0016584;nucleosome positioning;0.0436635700180604!GO:0030503;regulation of cell redox homeostasis;0.0445910602589132!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0445910602589132!GO:0044438;microbody part;0.0446350095940348!GO:0044439;peroxisomal part;0.0446350095940348!GO:0031625;ubiquitin protein ligase binding;0.0446419950705307!GO:0051098;regulation of binding;0.0446419950705307!GO:0030032;lamellipodium biogenesis;0.0449173526553962!GO:0008538;proteasome activator activity;0.0452436293279303!GO:0042158;lipoprotein biosynthetic process;0.0455292711481258!GO:0030145;manganese ion binding;0.0455426415212101!GO:0007030;Golgi organization and biogenesis;0.045616256873166!GO:0005669;transcription factor TFIID complex;0.0458332042424113!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0460539469935775!GO:0030911;TPR domain binding;0.0462416998481655!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0462641016537961!GO:0006779;porphyrin biosynthetic process;0.0462641016537961!GO:0033014;tetrapyrrole biosynthetic process;0.0462641016537961!GO:0042585;germinal vesicle;0.0463658736267238!GO:0006007;glucose catabolic process;0.0465321928095712!GO:0019206;nucleoside kinase activity;0.0465321928095712!GO:0048037;cofactor binding;0.0487618224963898!GO:0051348;negative regulation of transferase activity;0.049116059077326!GO:0051271;negative regulation of cell motility;0.0494459468136946!GO:0004656;procollagen-proline 4-dioxygenase activity;0.049845413035112!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.049845413035112 | |||
|sample_id=13230 | |sample_id=13230 | ||
|sample_note= | |sample_note= | ||
| Line 75: | Line 105: | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue= | |sample_tissue= | ||
|time= 00hr00min | |||
|timecourse=MSC_to_adipocyte_(human) | |||
|top_motifs=ESR1:2.02573727315;HES1:1.72611809568;ALX4:1.58826309069;UFEwm:1.52737903139;ZNF238:1.48459998148;NR3C1:1.40247414543;GFI1B:1.38883834376;PAX1,9:1.28178335846;TAL1_TCF{3,4,12}:1.27930546984;MYBL2:1.26125566922;SRF:1.24775995881;RXR{A,B,G}:1.19514043528;GATA4:1.18609425721;TFAP4:1.18212138109;HOX{A4,D4}:1.16364871144;MAFB:1.13618683504;HOX{A6,A7,B6,B7}:1.12806031888;GLI1..3:1.12780594672;KLF4:1.11267330234;NANOG{mouse}:1.1074199555;NKX3-2:1.07594330604;HOX{A5,B5}:1.05650253213;TEAD1:1.03574467639;GCM1,2:1.03485825424;NKX2-2,8:1.02887143729;EVI1:1.02759469568;GZF1:0.996448140873;IKZF1:0.969391829643;EN1,2:0.942247090375;XBP1:0.940547584437;RXRA_VDR{dimer}:0.929304934803;ATF6:0.925074786391;TLX1..3_NFIC{dimer}:0.874896788483;SPZ1:0.824073146202;HAND1,2:0.782542287394;GTF2I:0.781492824129;HMGA1,2:0.776974301656;EBF1:0.770318981822;NFE2L1:0.768722791504;LHX3,4:0.752071646138;PAX4:0.743023302123;PRDM1:0.738042813272;NKX6-1,2:0.710383606852;DBP:0.664522644802;HBP1_HMGB_SSRP1_UBTF:0.661881418946;ZIC1..3:0.661114159665;TP53:0.659558852188;GTF2A1,2:0.651537193458;NFIX:0.6436692307;MZF1:0.641669006018;NKX3-1:0.640269947792;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.609657542381;ZNF384:0.585437091333;YY1:0.585104896934;NFATC1..3:0.557530519891;TFCP2:0.540271748967;FOXL1:0.508471809618;STAT2,4,6:0.503759744636;SOX17:0.475203151261;ZNF148:0.419613831545;TBP:0.411777007489;HIF1A:0.395657229102;ALX1:0.394056874709;PAX8:0.38211896051;POU5F1:0.36030730856;PPARG:0.34895808789;RREB1:0.334072766632;NFE2L2:0.320893435621;GFI1:0.315894831;HLF:0.311396997603;MAZ:0.305369845411;PATZ1:0.305147922703;MYFfamily:0.293708703895;NR6A1:0.293359758781;HSF1,2:0.292112400677;SMAD1..7,9:0.264091693501;TEF:0.258509210012;ZNF423:0.253652281682;TFAP2B:0.249572228988;NR1H4:0.232825671433;HMX1:0.217521777802;TBX4,5:0.168226579092;AHR_ARNT_ARNT2:0.158299817794;POU1F1:0.107182690411;NKX2-3_NKX2-5:0.103723689692;AIRE:0.0845031792157;TFAP2{A,C}:0.0840446792928;VSX1,2:0.0618441303031;ZBTB6:0.0561730068672;BACH2:0.0551161452149;FOXO1,3,4:0.0407720895725;MTE{core}:0.0242621208989;CEBPA,B_DDIT3:0.00416335465475;MEF2{A,B,C,D}:-0.00502002550395;PAX6:-0.0151324797137;TOPORS:-0.0194093080728;bHLH_family:-0.0260121311945;ADNP_IRX_SIX_ZHX:-0.0521375451829;PAX5:-0.0581843349508;ELK1,4_GABP{A,B1}:-0.0602888551488;XCPE1{core}:-0.0610142076564;IRF1,2:-0.068635672702;ONECUT1,2:-0.0885755174856;DMAP1_NCOR{1,2}_SMARC:-0.0887895078524;HNF1A:-0.100069920043;RUNX1..3:-0.107417303474;MTF1:-0.1110969928;TLX2:-0.132831983335;FOXP3:-0.133571347502;FOS_FOS{B,L1}_JUN{B,D}:-0.133939609873;HIC1:-0.148796354168;STAT1,3:-0.149434027631;ZBTB16:-0.16246303988;NHLH1,2:-0.172517704186;LEF1_TCF7_TCF7L1,2:-0.175718746974;ZNF143:-0.193024995234;AR:-0.201646559946;FOXD3:-0.202670697612;CDC5L:-0.222968528826;REST:-0.229656494368;SOX5:-0.24295110594;ATF4:-0.252146952936;STAT5{A,B}:-0.259059913989;NRF1:-0.265202462334;MED-1{core}:-0.269682479064;PRRX1,2:-0.270077667118;NFE2:-0.273468252278;RFX1:-0.321176284632;EGR1..3:-0.321489762957;CDX1,2,4:-0.326087357029;TFDP1:-0.329625811638;FOSL2:-0.330055708866;HNF4A_NR2F1,2:-0.333190608298;NKX2-1,4:-0.365951823615;MYB:-0.380504383958;SREBF1,2:-0.382067010497;BPTF:-0.382792625446;PDX1:-0.387161748167;EP300:-0.392497178019;POU3F1..4:-0.401666587656;FOXM1:-0.403279714483;FOXA2:-0.408524220649;E2F1..5:-0.416270108799;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.433626503843;SOX{8,9,10}:-0.444579316764;SPI1:-0.46651429727;PAX2:-0.471510714275;IKZF2:-0.474686420843;NR5A1,2:-0.479470127436;NFKB1_REL_RELA:-0.498625245566;CREB1:-0.508156582083;NFIL3:-0.51417564994;CUX2:-0.537504555931;ATF5_CREB3:-0.547143321253;FOXP1:-0.552696181973;IRF7:-0.553786090484;SPIB:-0.557598980792;ELF1,2,4:-0.581188022251;TGIF1:-0.586952659438;HOXA9_MEIS1:-0.603889220093;PAX3,7:-0.628220577684;ETS1,2:-0.640970113296;CRX:-0.643930257075;LMO2:-0.646615109751;SOX2:-0.651095746513;ARID5B:-0.656516056637;OCT4_SOX2{dimer}:-0.698785475453;FOX{D1,D2}:-0.70334440892;JUN:-0.708598518524;FOXN1:-0.763838611391;ZFP161:-0.772399033402;NFY{A,B,C}:-0.807176650948;POU6F1:-0.817576675392;BREu{core}:-0.818311301855;NANOG:-0.823328885585;ESRRA:-0.841810593728;SNAI1..3:-0.845515059057;SP1:-0.848058487945;GATA6:-0.857535540435;POU2F1..3:-0.880325747309;PITX1..3:-0.901149356357;FOX{I1,J2}:-0.90697440864;T:-0.982234827638;PBX1:-1.01572185245;ZEB1:-1.02484062124;RFX2..5_RFXANK_RFXAP:-1.08465048081;ATF2:-1.11982592843;FOXQ1:-1.17358302191;RBPJ:-1.29157262461;FOX{F1,F2,J1}:-1.31455972076;RORA:-1.40617198388;MYOD1:-2.05628708741 | |top_motifs=ESR1:2.02573727315;HES1:1.72611809568;ALX4:1.58826309069;UFEwm:1.52737903139;ZNF238:1.48459998148;NR3C1:1.40247414543;GFI1B:1.38883834376;PAX1,9:1.28178335846;TAL1_TCF{3,4,12}:1.27930546984;MYBL2:1.26125566922;SRF:1.24775995881;RXR{A,B,G}:1.19514043528;GATA4:1.18609425721;TFAP4:1.18212138109;HOX{A4,D4}:1.16364871144;MAFB:1.13618683504;HOX{A6,A7,B6,B7}:1.12806031888;GLI1..3:1.12780594672;KLF4:1.11267330234;NANOG{mouse}:1.1074199555;NKX3-2:1.07594330604;HOX{A5,B5}:1.05650253213;TEAD1:1.03574467639;GCM1,2:1.03485825424;NKX2-2,8:1.02887143729;EVI1:1.02759469568;GZF1:0.996448140873;IKZF1:0.969391829643;EN1,2:0.942247090375;XBP1:0.940547584437;RXRA_VDR{dimer}:0.929304934803;ATF6:0.925074786391;TLX1..3_NFIC{dimer}:0.874896788483;SPZ1:0.824073146202;HAND1,2:0.782542287394;GTF2I:0.781492824129;HMGA1,2:0.776974301656;EBF1:0.770318981822;NFE2L1:0.768722791504;LHX3,4:0.752071646138;PAX4:0.743023302123;PRDM1:0.738042813272;NKX6-1,2:0.710383606852;DBP:0.664522644802;HBP1_HMGB_SSRP1_UBTF:0.661881418946;ZIC1..3:0.661114159665;TP53:0.659558852188;GTF2A1,2:0.651537193458;NFIX:0.6436692307;MZF1:0.641669006018;NKX3-1:0.640269947792;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.609657542381;ZNF384:0.585437091333;YY1:0.585104896934;NFATC1..3:0.557530519891;TFCP2:0.540271748967;FOXL1:0.508471809618;STAT2,4,6:0.503759744636;SOX17:0.475203151261;ZNF148:0.419613831545;TBP:0.411777007489;HIF1A:0.395657229102;ALX1:0.394056874709;PAX8:0.38211896051;POU5F1:0.36030730856;PPARG:0.34895808789;RREB1:0.334072766632;NFE2L2:0.320893435621;GFI1:0.315894831;HLF:0.311396997603;MAZ:0.305369845411;PATZ1:0.305147922703;MYFfamily:0.293708703895;NR6A1:0.293359758781;HSF1,2:0.292112400677;SMAD1..7,9:0.264091693501;TEF:0.258509210012;ZNF423:0.253652281682;TFAP2B:0.249572228988;NR1H4:0.232825671433;HMX1:0.217521777802;TBX4,5:0.168226579092;AHR_ARNT_ARNT2:0.158299817794;POU1F1:0.107182690411;NKX2-3_NKX2-5:0.103723689692;AIRE:0.0845031792157;TFAP2{A,C}:0.0840446792928;VSX1,2:0.0618441303031;ZBTB6:0.0561730068672;BACH2:0.0551161452149;FOXO1,3,4:0.0407720895725;MTE{core}:0.0242621208989;CEBPA,B_DDIT3:0.00416335465475;MEF2{A,B,C,D}:-0.00502002550395;PAX6:-0.0151324797137;TOPORS:-0.0194093080728;bHLH_family:-0.0260121311945;ADNP_IRX_SIX_ZHX:-0.0521375451829;PAX5:-0.0581843349508;ELK1,4_GABP{A,B1}:-0.0602888551488;XCPE1{core}:-0.0610142076564;IRF1,2:-0.068635672702;ONECUT1,2:-0.0885755174856;DMAP1_NCOR{1,2}_SMARC:-0.0887895078524;HNF1A:-0.100069920043;RUNX1..3:-0.107417303474;MTF1:-0.1110969928;TLX2:-0.132831983335;FOXP3:-0.133571347502;FOS_FOS{B,L1}_JUN{B,D}:-0.133939609873;HIC1:-0.148796354168;STAT1,3:-0.149434027631;ZBTB16:-0.16246303988;NHLH1,2:-0.172517704186;LEF1_TCF7_TCF7L1,2:-0.175718746974;ZNF143:-0.193024995234;AR:-0.201646559946;FOXD3:-0.202670697612;CDC5L:-0.222968528826;REST:-0.229656494368;SOX5:-0.24295110594;ATF4:-0.252146952936;STAT5{A,B}:-0.259059913989;NRF1:-0.265202462334;MED-1{core}:-0.269682479064;PRRX1,2:-0.270077667118;NFE2:-0.273468252278;RFX1:-0.321176284632;EGR1..3:-0.321489762957;CDX1,2,4:-0.326087357029;TFDP1:-0.329625811638;FOSL2:-0.330055708866;HNF4A_NR2F1,2:-0.333190608298;NKX2-1,4:-0.365951823615;MYB:-0.380504383958;SREBF1,2:-0.382067010497;BPTF:-0.382792625446;PDX1:-0.387161748167;EP300:-0.392497178019;POU3F1..4:-0.401666587656;FOXM1:-0.403279714483;FOXA2:-0.408524220649;E2F1..5:-0.416270108799;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.433626503843;SOX{8,9,10}:-0.444579316764;SPI1:-0.46651429727;PAX2:-0.471510714275;IKZF2:-0.474686420843;NR5A1,2:-0.479470127436;NFKB1_REL_RELA:-0.498625245566;CREB1:-0.508156582083;NFIL3:-0.51417564994;CUX2:-0.537504555931;ATF5_CREB3:-0.547143321253;FOXP1:-0.552696181973;IRF7:-0.553786090484;SPIB:-0.557598980792;ELF1,2,4:-0.581188022251;TGIF1:-0.586952659438;HOXA9_MEIS1:-0.603889220093;PAX3,7:-0.628220577684;ETS1,2:-0.640970113296;CRX:-0.643930257075;LMO2:-0.646615109751;SOX2:-0.651095746513;ARID5B:-0.656516056637;OCT4_SOX2{dimer}:-0.698785475453;FOX{D1,D2}:-0.70334440892;JUN:-0.708598518524;FOXN1:-0.763838611391;ZFP161:-0.772399033402;NFY{A,B,C}:-0.807176650948;POU6F1:-0.817576675392;BREu{core}:-0.818311301855;NANOG:-0.823328885585;ESRRA:-0.841810593728;SNAI1..3:-0.845515059057;SP1:-0.848058487945;GATA6:-0.857535540435;POU2F1..3:-0.880325747309;PITX1..3:-0.901149356357;FOX{I1,J2}:-0.90697440864;T:-0.982234827638;PBX1:-1.01572185245;ZEB1:-1.02484062124;RFX2..5_RFXANK_RFXAP:-1.08465048081;ATF2:-1.11982592843;FOXQ1:-1.17358302191;RBPJ:-1.29157262461;FOX{F1,F2,J1}:-1.31455972076;RORA:-1.40617198388;MYOD1:-2.05628708741 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:13230-141I8;search_select_hide=table117:FF:13230-141I8 | |||
}} | }} | ||
Latest revision as of 18:54, 4 June 2020
| Name: | mesenchymal stem cells (adipose derived), adipogenic induction |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13420 |
| Sample type: | time courses |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13420
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13420
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.396 |
| 10 | 10 | 0.364 |
| 100 | 100 | 0.691 |
| 101 | 101 | 0.672 |
| 102 | 102 | 0.166 |
| 103 | 103 | 0.363 |
| 104 | 104 | 0.724 |
| 105 | 105 | 0.332 |
| 106 | 106 | 0.456 |
| 107 | 107 | 0.183 |
| 108 | 108 | 0.2 |
| 109 | 109 | 0.766 |
| 11 | 11 | 0.522 |
| 110 | 110 | 0.164 |
| 111 | 111 | 0.94 |
| 112 | 112 | 0.158 |
| 113 | 113 | 0.016 |
| 114 | 114 | 0.231 |
| 115 | 115 | 0.0789 |
| 116 | 116 | 0.0743 |
| 117 | 117 | 0.556 |
| 118 | 118 | 0.536 |
| 119 | 119 | 0.879 |
| 12 | 12 | 0.679 |
| 120 | 120 | 0.621 |
| 121 | 121 | 0.832 |
| 122 | 122 | 0.00746 |
| 123 | 123 | 0.0102 |
| 124 | 124 | 0.357 |
| 125 | 125 | 0.729 |
| 126 | 126 | 0.987 |
| 127 | 127 | 0.827 |
| 128 | 128 | 0.345 |
| 129 | 129 | 0.829 |
| 13 | 13 | 0.615 |
| 130 | 130 | 0.728 |
| 131 | 131 | 0.502 |
| 132 | 132 | 0.282 |
| 133 | 133 | 0.579 |
| 134 | 134 | 0.0569 |
| 135 | 135 | 0.807 |
| 136 | 136 | 0.308 |
| 137 | 137 | 0.289 |
| 138 | 138 | 0.443 |
| 139 | 139 | 0.898 |
| 14 | 14 | 0.248 |
| 140 | 140 | 0.565 |
| 141 | 141 | 0.66 |
| 142 | 142 | 0.812 |
| 143 | 143 | 0.878 |
| 144 | 144 | 0.2 |
| 145 | 145 | 0.512 |
| 146 | 146 | 0.663 |
| 147 | 147 | 0.304 |
| 148 | 148 | 0.558 |
| 149 | 149 | 0.00849 |
| 15 | 15 | 0.559 |
| 150 | 150 | 0.255 |
| 151 | 151 | 0.748 |
| 152 | 152 | 0.219 |
| 153 | 153 | 0.139 |
| 154 | 154 | 0.865 |
| 155 | 155 | 0.00209 |
| 156 | 156 | 0.793 |
| 157 | 157 | 0.463 |
| 158 | 158 | 0.011 |
| 159 | 159 | 0.281 |
| 16 | 16 | 0.0315 |
| 160 | 160 | 0.189 |
| 161 | 161 | 0.885 |
| 162 | 162 | 0.355 |
| 163 | 163 | 0.876 |
| 164 | 164 | 0.135 |
| 165 | 165 | 0.945 |
| 166 | 166 | 0.0642 |
| 167 | 167 | 0.977 |
| 168 | 168 | 0.772 |
| 169 | 169 | 0.0127 |
| 17 | 17 | 0.592 |
| 18 | 18 | 0.0992 |
| 19 | 19 | 0.00312 |
| 2 | 2 | 0.244 |
| 20 | 20 | 0.372 |
| 21 | 21 | 0.0101 |
| 22 | 22 | 0.292 |
| 23 | 23 | 0.643 |
| 24 | 24 | 0.297 |
| 25 | 25 | 0.355 |
| 26 | 26 | 0.154 |
| 27 | 27 | 0.696 |
| 28 | 28 | 0.165 |
| 29 | 29 | 0.515 |
| 3 | 3 | 0.309 |
| 30 | 30 | 0.215 |
| 31 | 31 | 0.5 |
| 32 | 32 | 8.20912e-14 |
| 33 | 33 | 0.94 |
| 34 | 34 | 0.612 |
| 35 | 35 | 0.997 |
| 36 | 36 | 0.0833 |
| 37 | 37 | 0.0574 |
| 38 | 38 | 0.643 |
| 39 | 39 | 0.12 |
| 4 | 4 | 0.277 |
| 40 | 40 | 0.238 |
| 41 | 41 | 0.353 |
| 42 | 42 | 0.846 |
| 43 | 43 | 0.428 |
| 44 | 44 | 0.125 |
| 45 | 45 | 0.928 |
| 46 | 46 | 0.275 |
| 47 | 47 | 0.994 |
| 48 | 48 | 0.743 |
| 49 | 49 | 0.924 |
| 5 | 5 | 0.9 |
| 50 | 50 | 0.78 |
| 51 | 51 | 0.862 |
| 52 | 52 | 0.865 |
| 53 | 53 | 0.126 |
| 54 | 54 | 0.582 |
| 55 | 55 | 0.146 |
| 56 | 56 | 0.878 |
| 57 | 57 | 0.95 |
| 58 | 58 | 0.423 |
| 59 | 59 | 0.0926 |
| 6 | 6 | 0.734 |
| 60 | 60 | 0.833 |
| 61 | 61 | 0.923 |
| 62 | 62 | 0.796 |
| 63 | 63 | 0.432 |
| 64 | 64 | 0.946 |
| 65 | 65 | 0.448 |
| 66 | 66 | 0.211 |
| 67 | 67 | 0.342 |
| 68 | 68 | 0.377 |
| 69 | 69 | 0.672 |
| 7 | 7 | 0.29 |
| 70 | 70 | 0.277 |
| 71 | 71 | 0.172 |
| 72 | 72 | 0.607 |
| 73 | 73 | 0.124 |
| 74 | 74 | 0.115 |
| 75 | 75 | 0.443 |
| 76 | 76 | 0.563 |
| 77 | 77 | 0.0117 |
| 78 | 78 | 0.52 |
| 79 | 79 | 0.00322 |
| 8 | 8 | 0.121 |
| 80 | 80 | 0.844 |
| 81 | 81 | 0.4 |
| 82 | 82 | 0.382 |
| 83 | 83 | 0.699 |
| 84 | 84 | 0.762 |
| 85 | 85 | 0.424 |
| 86 | 86 | 0.397 |
| 87 | 87 | 0.133 |
| 88 | 88 | 0.579 |
| 89 | 89 | 0.047 |
| 9 | 9 | 0.532 |
| 90 | 90 | 0.83 |
| 91 | 91 | 0.771 |
| 92 | 92 | 0.338 |
| 93 | 93 | 0.225 |
| 94 | 94 | 0.566 |
| 95 | 95 | 0.79 |
| 96 | 96 | 0.686 |
| 97 | 97 | 0.832 |
| 98 | 98 | 0.983 |
| 99 | 99 | 0.0352 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13420
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000690 human mesenchymal stem cells adipose derived, 0 minutes after adipogenic induction sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002570 (mesenchymal stem cell of adipose)
UBERON: Anatomy
0001013 (adipose tissue)
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000350 (experimentally modified sample)
0000344 (0 minute sample)
0000329 (adipogenic induction sample)
0000096 (human mesenchymal stem cell of adipose sample)
0000690 (human mesenchymal stem cells adipose derived, 0 minutes after adipogenic induction sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
