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FFCP PHASE1:Mm9::chr17:78907476..78907504,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74199
|EntrezGene=74199
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8VHI5
|UniProt=Q8VHI5
|association_with_transcript=0bp_to_ENSMUST00000024880_5end
|association_with_transcript=0bp_to_ENSMUST00000024880_5end
|cluster_id=chr17:78907476..78907504,+
|description=CAGE_peak_1_at_Vit_5end
|description=CAGE_peak_1_at_Vit_5end
|id=chr17:78907476..78907504,+
|id=chr17:78907476..78907504,+
|ontology_enrichment_celltype=CL:0000117!1.79e-09!23;CL:0000337!1.79e-09!23;CL:0000055!2.41e-07!50
|ontology_enrichment_celltype=CL:0000117!1.79e-09!23;CL:0000337!1.79e-09!23;CL:0000055!2.41e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.03e-11,23;CL:0000337,2.03e-11,23;CL:0000221,1.62e-08,44;CL:0000133,1.62e-08,44;CL:0002319,5.80e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.05e-13!102;UBERON:0000924!1.05e-13!102;UBERON:0006601!1.05e-13!102;UBERON:0000033!3.05e-13!63;UBERON:0002346!1.70e-12!71;UBERON:0003075!1.70e-12!71;UBERON:0007284!1.70e-12!71;UBERON:0003056!8.95e-11!49;UBERON:0001049!4.94e-09!52;UBERON:0005068!4.94e-09!52;UBERON:0006241!4.94e-09!52;UBERON:0007135!4.94e-09!52;UBERON:0000020!1.73e-08!12;UBERON:0001032!1.73e-08!12;UBERON:0004456!1.73e-08!12;UBERON:0007811!2.72e-08!86;UBERON:0001444!9.64e-08!11;UBERON:0001017!1.04e-07!73;UBERON:0005743!1.04e-07!73;UBERON:0000153!1.04e-07!94;UBERON:0000970!1.35e-07!9;UBERON:0000019!1.35e-07!9;UBERON:0000047!1.35e-07!9;UBERON:0004088!1.35e-07!9;UBERON:0002104!1.35e-07!9;UBERON:0001456!1.35e-07!9;UBERON:0003072!1.35e-07!9;UBERON:0003071!1.35e-07!9;UBERON:0004128!1.35e-07!9;UBERON:0000073!1.54e-07!75;UBERON:0001016!1.54e-07!75;UBERON:0002616!2.11e-07!49;UBERON:0000955!2.24e-07!50;UBERON:0006238!2.24e-07!50;UBERON:0000468!7.02e-07!333
|ontology_enrichment_uberon=UBERON:0004121!1.05e-13!102;UBERON:0000924!1.05e-13!102;UBERON:0006601!1.05e-13!102;UBERON:0000033!3.05e-13!63;UBERON:0002346!1.70e-12!71;UBERON:0003075!1.70e-12!71;UBERON:0007284!1.70e-12!71;UBERON:0003056!8.95e-11!49;UBERON:0001049!4.94e-09!52;UBERON:0005068!4.94e-09!52;UBERON:0006241!4.94e-09!52;UBERON:0007135!4.94e-09!52;UBERON:0000020!1.73e-08!12;UBERON:0001032!1.73e-08!12;UBERON:0004456!1.73e-08!12;UBERON:0007811!2.72e-08!86;UBERON:0001444!9.64e-08!11;UBERON:0001017!1.04e-07!73;UBERON:0005743!1.04e-07!73;UBERON:0000153!1.04e-07!94;UBERON:0000970!1.35e-07!9;UBERON:0000019!1.35e-07!9;UBERON:0000047!1.35e-07!9;UBERON:0004088!1.35e-07!9;UBERON:0002104!1.35e-07!9;UBERON:0001456!1.35e-07!9;UBERON:0003072!1.35e-07!9;UBERON:0003071!1.35e-07!9;UBERON:0004128!1.35e-07!9;UBERON:0000073!1.54e-07!75;UBERON:0001016!1.54e-07!75;UBERON:0002616!2.11e-07!49;UBERON:0000955!2.24e-07!50;UBERON:0006238!2.24e-07!50;UBERON:0000468!7.02e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.92e-12,95;UBERON:0000924,2.92e-12,95;UBERON:0006601,2.92e-12,95;UBERON:0002346,5.41e-12,64;UBERON:0003075,5.41e-12,64;UBERON:0007284,5.41e-12,64;UBERON:0010371,5.64e-12,73;UBERON:0010314,1.53e-10,92;UBERON:0003056,5.83e-10,49;UBERON:0000020,2.95e-09,12;UBERON:0001032,2.95e-09,12;UBERON:0004456,2.95e-09,12;UBERON:0000970,4.40e-09,9;UBERON:0000019,4.40e-09,9;UBERON:0000047,4.40e-09,9;UBERON:0010312,4.40e-09,9;UBERON:0004088,4.40e-09,9;UBERON:0002104,4.40e-09,9;UBERON:0001456,4.40e-09,9;UBERON:0003072,4.40e-09,9;UBERON:0004128,4.40e-09,9;UBERON:0003071,4.40e-09,9;UBERON:0001444,1.58e-08,11;UBERON:0000033,3.62e-08,13;UBERON:0000073,8.92e-08,54;UBERON:0001049,9.98e-08,52;UBERON:0005068,9.98e-08,52;UBERON:0006241,9.98e-08,52;UBERON:0007135,9.98e-08,52;UBERON:0001017,1.84e-07,73;UBERON:0001016,6.57e-07,75
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.4017744530586,48.7623039165865,22.5762505158868,2.34717403304412,14.6076854774899,3.07560655828261,4.08302788055995,4.75953833526233,1.43752564364972,0,0,0,0.257259436035947,1.14613375975503,0.515672092277442,8.29497489524351,5.28990979272033,5.70448263155561,0,0,0,0,0,3.29560121570245,3.45796474789399,5.18448061542388,3.37514845829227,3.36519938162211,3.71346279724945,2.42955395046775,6.61450315760752,8.62609239164127,7.35375029288017,1.10115880999389,1.14918604276669,1.99688493233117,5.27545150920775,4.11694396210843,2.08365348222704,1.11673199600552,1.68828783009504,1.68078072554491,2.06240009831567,3.84403538157578,2.98239113320481,0.605809546665472,0.226714680320357,0.289864488701678,0.860423876981386,0,0,0,0,1.26399978118577,0.681721290312231,0.259786004602869,0.35333957451034,7.60554466794075,23.0987659345772,22.9324715735981,7.11066703153331,0,0,0,0.34255163915718,0.517875767294343,1.7813056687779,0.346970653532272,0,0.922461989024234,2.11011696773672,2.23418543557839,1.25666591329675,0.494389935468748,12.2909453381925,3.5384422077995,2.58826959915855,3.75430581382669,7.75800405016355,3.72783522436244,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,3.14560342750128,1.83000241127451,4.39790232395025,0.173824320192276,1.02286182932132,2.70124457927428,1.1356888414743,0.916554274652847,6.59356944233493,3.79084137650512,11.7847439296425,17.3060189140396,17.9323641458109,24.3083875237221,26.5240479390859,29.459804132525,24.4697205744063,20.4269759540209,29.2334808935088,0,0,0,0.43839146485515,1.11218899690239,1.39300866608867,5.76189981942242,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,1.5179494507732,0.822799249567402,1.47750717671186,2.02672023864639,1.75439984910399,1.53685080703735,4.02619256281115,1.26173969138476,3.70456604565424,0,0,0.426576501070468,0,0,0,0,0,0.949058123089023,0.658795818896044,0.754005626400808,0.795825888164603,1.16978452271472,0,0.648414149624083,0.995706366271836,0.189667900953082,0.342745537829186,1.1270773567308,0.407302655690628,0.581857461502877,0.140271639780637,0,0.147610147979602,0,0,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0.369506380333209,0.189491411770485,0.325929952884052,0.169745085775188,0,0.335012514883631,0.476087281772027,0.780534591431195,0,0.221464689648775,0.159454768657487,0.655453258862952,1.72684981865896,0.433947175744535,0,0,0,0.827810238914197,2.24770825982909,1.99259867206745,0.163934945376675,4.79694761688309,0,0,0,0,0,0,0,0,0,0.642642632843614,3.26462195979018,0.35613120733451,0.162886959353576,6.59880491890142,2.65490276679926,0,0,0.565815239267694,0,1.22974059177571,1.03371317267288,0.727067458955011,0.712994756769443,2.84433082142234,0,0,1.36175842301515,4.86164953884538,0.776152102696527,0.214337035031592,0.532020700926821,2.31879462882692,1.97458824722545,2.13125464380219,0.23467170806371,0,5.07215315526412,3.2977250588296,0.322928853391811,1.38719727334758,1.43246812803764,1.64140899745061,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0,0,0.209088296014469,0,0.674321731924103,0.495920734352016,0.26175594198403,1.68499465279331,0.621339313086926,0,0,0,0,0.258319646955462,0.168956125490778,0.352071715937262,2.73429208172295,1.57289016638566,1.20792060413003,1.44015003128933,0.632022241256357,0.202725215290164,0,0,0.358053391334963,0.39736270956253,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.504130925684203,0.0974578807397524,0.192423683280659,0.350630706544707,8.61575457737803,0,0,0,4.82973985080476,4.31669693537719,3.11357761254351,1.50057865355346,3.00943262421218,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,1.3492355185943,1.19707462020309,1.02440163452481,0.243106717068294,0.628839487883947,0.367687016900028,1.55572709461131,1.64828045791115,1.28367683836726,1.51618327058278,1.52087579934144,1.69763707247469,1.77918864192777,1.85672941974121,1.83793500657962,3.33405583898152,1.73826488917283,1.35036454324594,0.412085900803307,1.61918812147837,1.02860775715625,1.06485483695602,1.43061713968393,1.30811774969096,2.1645157495526,1.35383372626682,1.09756783723664,1.57841826862706,1.62964936615034,1.68342681497322,1.30498519936592,2.46261205938909,1.63692417267876,2.01417893541756,0.964533054905707,4.74640098082097,3.50897412668113,2.36358159453128,1.72159498861959,6.17655973534643,8.81097775357602
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.4017744530586,48.7623039165865,22.5762505158868,2.34717403304412,14.6076854774899,3.07560655828261,4.08302788055995,4.75953833526233,1.43752564364972,0,0,0,0.257259436035947,1.14613375975503,0.515672092277442,8.29497489524351,5.28990979272033,5.70448263155561,0,0,0,0,0,3.29560121570245,3.45796474789399,5.18448061542388,3.37514845829227,3.36519938162211,3.71346279724945,2.42955395046775,6.61450315760752,8.62609239164127,7.35375029288017,1.10115880999389,1.14918604276669,1.99688493233117,5.27545150920775,4.11694396210843,2.08365348222704,1.11673199600552,1.68828783009504,1.68078072554491,2.06240009831567,3.84403538157578,2.98239113320481,0.605809546665472,0.226714680320357,0.289864488701678,0.860423876981386,0,0,0,0,1.26399978118577,0.681721290312231,0.259786004602869,0.35333957451034,7.60554466794075,23.0987659345772,22.9324715735981,7.11066703153331,0,0,0,0.34255163915718,0.517875767294343,1.7813056687779,0.346970653532272,0,0.922461989024234,2.11011696773672,2.23418543557839,1.25666591329675,0.494389935468748,12.2909453381925,3.5384422077995,2.58826959915855,3.75430581382669,7.75800405016355,3.72783522436244,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,3.14560342750128,1.83000241127451,4.39790232395025,0.173824320192276,1.02286182932132,2.70124457927428,1.1356888414743,0.916554274652847,6.59356944233493,3.79084137650512,11.7847439296425,17.3060189140396,17.9323641458109,24.3083875237221,26.5240479390859,29.459804132525,24.4697205744063,20.4269759540209,29.2334808935088,0,0,0,0.43839146485515,1.11218899690239,1.39300866608867,5.76189981942242,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,1.5179494507732,0.822799249567402,1.47750717671186,2.02672023864639,1.75439984910399,1.53685080703735,4.02619256281115,1.26173969138476,3.70456604565424,0,0,0.426576501070468,0,0,0,0,0,0.949058123089023,0.658795818896044,0.754005626400808,0.795825888164603,1.16978452271472,0,0.648414149624083,0.995706366271836,0.189667900953082,0.342745537829186,1.1270773567308,0.407302655690628,0.581857461502877,0.140271639780637,0,0.147610147979602,0,0,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0.369506380333209,0.189491411770485,0.325929952884052,0.169745085775188,0,0.335012514883631,0.476087281772027,0.780534591431195,0,0.221464689648775,0.159454768657487,0.655453258862952,1.72684981865896,0.433947175744535,0,0,0,0.827810238914197,2.24770825982909,1.99259867206745,0.163934945376675,4.79694761688309,0,0,0,0,0,0,0,0,0,0.642642632843614,3.26462195979018,0.35613120733451,0.162886959353576,6.59880491890142,2.65490276679926,0,0,0.565815239267694,0,1.22974059177571,1.03371317267288,0.727067458955011,0.712994756769443,2.84433082142234,0,0,1.36175842301515,4.86164953884538,0.776152102696527,0.214337035031592,0.532020700926821,2.31879462882692,1.97458824722545,2.13125464380219,0.23467170806371,0,5.07215315526412,3.2977250588296,0.322928853391811,1.38719727334758,1.43246812803764,1.64140899745061,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0,0,0.209088296014469,0,0.674321731924103,0.495920734352016,0.26175594198403,1.68499465279331,0.621339313086926,0,0,0,0,0.258319646955462,0.168956125490778,0.352071715937262,2.73429208172295,1.57289016638566,1.20792060413003,1.44015003128933,0.632022241256357,0.202725215290164,0,0,0.358053391334963,0.39736270956253,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.504130925684203,0.0974578807397524,0.192423683280659,0.350630706544707,8.61575457737803,0,0,0,4.82973985080476,4.31669693537719,3.11357761254351,1.50057865355346,3.00943262421218,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,1.3492355185943,1.19707462020309,1.02440163452481,0.243106717068294,0.628839487883947,0.367687016900028,1.55572709461131,1.64828045791115,1.28367683836726,1.51618327058278,1.52087579934144,1.69763707247469,1.77918864192777,1.85672941974121,1.83793500657962,3.33405583898152,1.73826488917283,1.35036454324594,0.412085900803307,1.61918812147837,1.02860775715625,1.06485483695602,1.43061713968393,1.30811774969096,2.1645157495526,1.35383372626682,1.09756783723664,1.57841826862706,1.62964936615034,1.68342681497322,1.30498519936592,2.46261205938909,1.63692417267876,2.01417893541756,0.964533054905707,4.74640098082097,3.50897412668113,2.36358159453128,1.72159498861959,6.17655973534643,8.81097775357602
|short_description=p1@Vit
|short_description=p1@Vit
}}
}}

Latest revision as of 21:35, 26 September 2015

Short description:p1@Vit
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vit_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000024880_5end
EntrezGene:Vit
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vit

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D856.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D948.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B322.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.61
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.61
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H112.29
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.59
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G411.78
eyeball, embryo E12.CNhs11016.345-16C617.31
eyeball, embryo E14.CNhs10521.399-16E217.93
eyeball, embryo E15.CNhs10593.426-16C924.31
eyeball, embryo E17.CNhs11023.1261-18D426.52
eyeball, neonate N00.CNhs11207.633-15C629.46
eyeball, neonate N01.CNhs11140.1532-43E724.47
eyeball, neonate N02.CNhs11205.1551-44G820.43
eyeball, neonate N16.CNhs11188.777-19A229.23
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G66.60
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B48.81





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.03e-1123
neuroblast (sensu Vertebrata)2.03e-1123
ectodermal cell1.62e-0844
neurectodermal cell1.62e-0844
neural cell5.80e-0843

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.92e-1295
ectoderm2.92e-1295
presumptive ectoderm2.92e-1295
neurectoderm5.41e-1264
neural plate5.41e-1264
presumptive neural plate5.41e-1264
ecto-epithelium5.64e-1273
structure with developmental contribution from neural crest1.53e-1092
pre-chordal neural plate5.83e-1049
sense organ2.95e-0912
sensory system2.95e-0912
entire sense organ system2.95e-0912
eye4.40e-099
camera-type eye4.40e-099
simple eye4.40e-099
immature eye4.40e-099
ocular region4.40e-099
visual system4.40e-099
face4.40e-099
optic cup4.40e-099
optic vesicle4.40e-099
eye primordium4.40e-099
subdivision of head1.58e-0811
head3.62e-0813
regional part of nervous system8.92e-0854
neural tube9.98e-0852
neural rod9.98e-0852
future spinal cord9.98e-0852
neural keel9.98e-0852
central nervous system1.84e-0773
nervous system6.57e-0775
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