FFCP PHASE1:Mm9::chr19:6497724..6497744,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18190 | |EntrezGene=18190 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=53bp_to_ENSMUST00000148391_5end | |association_with_transcript=53bp_to_ENSMUST00000148391_5end | ||
|cluster_id=chr19:6497724..6497744,+ | |||
|description=CAGE_peak_9_at_Nrxn2_5end | |description=CAGE_peak_9_at_Nrxn2_5end | ||
|id=chr19:6497724..6497744,+ | |id=chr19:6497724..6497744,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.22e-14!23;CL:0000337!2.22e-14!23;CL:0000221!4.85e-10!44;CL:0000133!4.85e-10!44;CL:0000540!8.53e-10!33;CL:0000047!8.53e-10!33;CL:0000031!8.53e-10!33;CL:0000404!8.53e-10!33;CL:0002319!9.42e-10!43;CL:0000393!9.94e-08!39;CL:0000211!9.94e-08!39;CL:0000055!1.09e-07!50 | |ontology_enrichment_celltype=CL:0000117!2.22e-14!23;CL:0000337!2.22e-14!23;CL:0000221!4.85e-10!44;CL:0000133!4.85e-10!44;CL:0000540!8.53e-10!33;CL:0000047!8.53e-10!33;CL:0000031!8.53e-10!33;CL:0000404!8.53e-10!33;CL:0002319!9.42e-10!43;CL:0000393!9.94e-08!39;CL:0000211!9.94e-08!39;CL:0000055!1.09e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,8.07e-08,3;CL:0002612,9.44e-08,3;CL:0000117,9.79e-08,23;CL:0000337,9.79e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.74e-25!73;UBERON:0005743!3.74e-25!73;UBERON:0001049!5.33e-25!52;UBERON:0005068!5.33e-25!52;UBERON:0006241!5.33e-25!52;UBERON:0007135!5.33e-25!52;UBERON:0000073!8.30e-25!75;UBERON:0001016!8.30e-25!75;UBERON:0004121!4.25e-22!102;UBERON:0000924!4.25e-22!102;UBERON:0006601!4.25e-22!102;UBERON:0000955!3.09e-21!50;UBERON:0006238!3.09e-21!50;UBERON:0002346!5.53e-21!71;UBERON:0003075!5.53e-21!71;UBERON:0007284!5.53e-21!71;UBERON:0002616!2.89e-20!49;UBERON:0000033!3.37e-20!63;UBERON:0002020!3.28e-18!34;UBERON:0003056!3.44e-17!49;UBERON:0003080!8.57e-17!40;UBERON:0002780!1.81e-16!39;UBERON:0001890!1.81e-16!39;UBERON:0006240!1.81e-16!39;UBERON:0002791!9.19e-14!29;UBERON:0003528!9.19e-14!29;UBERON:0001893!9.19e-14!29;UBERON:0007811!5.86e-13!86;UBERON:0000153!3.39e-11!94;UBERON:0003076!5.46e-09!12;UBERON:0003057!5.46e-09!12;UBERON:0000956!3.84e-08!21;UBERON:0001869!3.84e-08!21;UBERON:0000203!3.84e-08!21;UBERON:0002420!2.07e-07!8;UBERON:0007245!2.07e-07!8;UBERON:0010009!2.07e-07!8;UBERON:0010011!2.07e-07!8;UBERON:0000454!2.07e-07!8;UBERON:0002240!7.88e-07!6;UBERON:0005174!7.88e-07!6;UBERON:0001137!7.88e-07!6 | |ontology_enrichment_uberon=UBERON:0001017!3.74e-25!73;UBERON:0005743!3.74e-25!73;UBERON:0001049!5.33e-25!52;UBERON:0005068!5.33e-25!52;UBERON:0006241!5.33e-25!52;UBERON:0007135!5.33e-25!52;UBERON:0000073!8.30e-25!75;UBERON:0001016!8.30e-25!75;UBERON:0004121!4.25e-22!102;UBERON:0000924!4.25e-22!102;UBERON:0006601!4.25e-22!102;UBERON:0000955!3.09e-21!50;UBERON:0006238!3.09e-21!50;UBERON:0002346!5.53e-21!71;UBERON:0003075!5.53e-21!71;UBERON:0007284!5.53e-21!71;UBERON:0002616!2.89e-20!49;UBERON:0000033!3.37e-20!63;UBERON:0002020!3.28e-18!34;UBERON:0003056!3.44e-17!49;UBERON:0003080!8.57e-17!40;UBERON:0002780!1.81e-16!39;UBERON:0001890!1.81e-16!39;UBERON:0006240!1.81e-16!39;UBERON:0002791!9.19e-14!29;UBERON:0003528!9.19e-14!29;UBERON:0001893!9.19e-14!29;UBERON:0007811!5.86e-13!86;UBERON:0000153!3.39e-11!94;UBERON:0003076!5.46e-09!12;UBERON:0003057!5.46e-09!12;UBERON:0000956!3.84e-08!21;UBERON:0001869!3.84e-08!21;UBERON:0000203!3.84e-08!21;UBERON:0002420!2.07e-07!8;UBERON:0007245!2.07e-07!8;UBERON:0010009!2.07e-07!8;UBERON:0010011!2.07e-07!8;UBERON:0000454!2.07e-07!8;UBERON:0002240!7.88e-07!6;UBERON:0005174!7.88e-07!6;UBERON:0001137!7.88e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.62e-12,73;UBERON:0001016,1.09e-11,75;UBERON:0002020,5.57e-11,34;UBERON:0003076,5.60e-11,12;UBERON:0003057,5.60e-11,12;UBERON:0001049,1.81e-10,52;UBERON:0005068,1.81e-10,52;UBERON:0006241,1.81e-10,52;UBERON:0007135,1.81e-10,52;UBERON:0000073,5.03e-10,54;UBERON:0001948,6.21e-10,5;UBERON:0002315,6.21e-10,5;UBERON:0000369,1.09e-09,5;UBERON:0002435,1.09e-09,5;UBERON:0000204,1.09e-09,5;UBERON:0010082,1.09e-09,5;UBERON:0004121,8.40e-09,95;UBERON:0000924,8.40e-09,95;UBERON:0006601,8.40e-09,95;UBERON:0002240,2.32e-08,6;UBERON:0005174,2.32e-08,6;UBERON:0001137,2.32e-08,6;UBERON:0002346,3.24e-08,64;UBERON:0003075,3.24e-08,64;UBERON:0007284,3.24e-08,64;UBERON:0000955,8.74e-08,47;UBERON:0006238,8.74e-08,47;UBERON:0002257,9.44e-08,3;UBERON:0010371,5.23e-07,73;UBERON:0001851,6.50e-07,1;UBERON:0005889,6.50e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0,1.26766280701236,0,0,0,0,0,0.898800331555214,1.92109152660777,0.414758449233911,0.405017814995072,0.210324961351382,0.856952953211411,1.54607978666129,0.122490799214954,0.191690942036473,0.919218786610021,0,0.766124028511126,0.307213066512487,0.263772575460388,1.55528994124096,1.04182674111352,0.837548997004143,0.56276261003168,0.30559649555362,1.17851434189467,1.13897344639282,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,1.46390398505774,45.4499353785197,0.255457055208591,0,0,0,0.149790639404823,0.457500602818626,1.00523481690292,0.521472960576829,2.30143911597297,0.20778804455956,0.324482526135515,0.101839363850316,0,0,0.420883711772948,0,0,0.180062129805349,0,0.408218994907967,0.512454881139399,0.468508622798644,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,1.05144974282064,1.13195073617213,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0,0,0,0.477937595905104,0,0,0,0.292255857911312,0,1.60660658210904,0,0,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.532020700926821,0,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0.453142408984205,1.03552062350364,0,1.59609949360412,0.170733605754134,0,0.628839487883947,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0.347652977834566,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0.385813221962283,0,0.467863216890817,0,0.956441660344217,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0,1.26766280701236,0,0,0,0,0,0.898800331555214,1.92109152660777,0.414758449233911,0.405017814995072,0.210324961351382,0.856952953211411,1.54607978666129,0.122490799214954,0.191690942036473,0.919218786610021,0,0.766124028511126,0.307213066512487,0.263772575460388,1.55528994124096,1.04182674111352,0.837548997004143,0.56276261003168,0.30559649555362,1.17851434189467,1.13897344639282,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,1.46390398505774,45.4499353785197,0.255457055208591,0,0,0,0.149790639404823,0.457500602818626,1.00523481690292,0.521472960576829,2.30143911597297,0.20778804455956,0.324482526135515,0.101839363850316,0,0,0.420883711772948,0,0,0.180062129805349,0,0.408218994907967,0.512454881139399,0.468508622798644,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,1.05144974282064,1.13195073617213,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0,0,0,0.477937595905104,0,0,0,0.292255857911312,0,1.60660658210904,0,0,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.532020700926821,0,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0.453142408984205,1.03552062350364,0,1.59609949360412,0.170733605754134,0,0.628839487883947,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0.347652977834566,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0.385813221962283,0,0.467863216890817,0,0.956441660344217,0,0 | ||
|short_description=p9@Nrxn2 | |short_description=p9@Nrxn2 | ||
}} | }} |
Latest revision as of 03:10, 26 September 2015
Short description: | p9@Nrxn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Nrxn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 53bp_to_ENSMUST00000148391_5end |
EntrezGene: | Nrxn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 8.07e-08 | 3 |
neuron of the ventral spinal cord | 9.44e-08 | 3 |
CNS neuron (sensu Vertebrata) | 9.79e-08 | 23 |
neuroblast (sensu Vertebrata) | 9.79e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.62e-12 | 73 |
nervous system | 1.09e-11 | 75 |
gray matter | 5.57e-11 | 34 |
posterior neural tube | 5.60e-11 | 12 |
chordal neural plate | 5.60e-11 | 12 |
neural tube | 1.81e-10 | 52 |
neural rod | 1.81e-10 | 52 |
future spinal cord | 1.81e-10 | 52 |
neural keel | 1.81e-10 | 52 |
regional part of nervous system | 5.03e-10 | 54 |
regional part of spinal cord | 6.21e-10 | 5 |
gray matter of spinal cord | 6.21e-10 | 5 |
corpus striatum | 1.09e-09 | 5 |
striatum | 1.09e-09 | 5 |
ventral part of telencephalon | 1.09e-09 | 5 |
future corpus striatum | 1.09e-09 | 5 |
ectoderm-derived structure | 8.40e-09 | 95 |
ectoderm | 8.40e-09 | 95 |
presumptive ectoderm | 8.40e-09 | 95 |
spinal cord | 2.32e-08 | 6 |
dorsal region element | 2.32e-08 | 6 |
dorsum | 2.32e-08 | 6 |
neurectoderm | 3.24e-08 | 64 |
neural plate | 3.24e-08 | 64 |
presumptive neural plate | 3.24e-08 | 64 |
brain | 8.74e-08 | 47 |
future brain | 8.74e-08 | 47 |
ventral horn of spinal cord | 9.44e-08 | 3 |
ecto-epithelium | 5.23e-07 | 73 |
cortex | 6.50e-07 | 1 |
zygote cortex | 6.50e-07 | 1 |