FFCP PHASE1:Mm9::chr6:113188520..113188545,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3249 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:113188520..113188545,- | |||
|description=CAGE_peak_at_chr6:113188520..113188545,- | |description=CAGE_peak_at_chr6:113188520..113188545,- | ||
|id=chr6:113188520..113188545,- | |id=chr6:113188520..113188545,- | ||
|ontology_enrichment_celltype=CL:0000988!4.81e-18!32;CL:0002032!4.81e-18!32;CL:0000037!4.81e-18!32;CL:0000566!4.81e-18!32;CL:0000837!4.81e-18!32;CL:0002320!5.14e-15!46;CL:0000134!5.14e-15!46;CL:0000034!1.50e-14!97;CL:0000063!3.33e-13!66;CL:0000049!4.96e-13!19;CL:0000219!3.53e-12!54;CL:0000144!1.54e-11!121;CL:0000012!1.54e-11!121;CL:0000723!1.26e-10!91;CL:0000048!1.26e-10!91;CL:0002371!9.74e-09!118;CL:0002031!2.69e-08!25;CL:0000084!1.41e-07!11;CL:0000827!1.41e-07!11;CL:0000624!1.47e-07!8;CL:0000763!1.65e-07!16;CL:0000838!6.78e-07!12;CL:0000893!7.53e-07!6;CL:0002489!7.53e-07!6;CL:0000898!7.53e-07!6;CL:0000809!7.53e-07!6;CL:0000810!7.53e-07!6;CL:0000895!7.53e-07!6;CL:0000808!7.53e-07!6;CL:0000894!7.53e-07!6;CL:0000806!7.53e-07!6;CL:0000807!7.53e-07!6;CL:0000805!7.53e-07!6;CL:0002425!7.53e-07!6;CL:0002436!7.53e-07!6;CL:0002427!7.53e-07!6;CL:0002428!7.53e-07!6;CL:0002429!7.53e-07!6;CL:0002433!7.53e-07!6;CL:0002431!7.53e-07!6;CL:0002432!7.53e-07!6;CL:0000557!8.59e-07!7 | |ontology_enrichment_celltype=CL:0000988!4.81e-18!32;CL:0002032!4.81e-18!32;CL:0000037!4.81e-18!32;CL:0000566!4.81e-18!32;CL:0000837!4.81e-18!32;CL:0002320!5.14e-15!46;CL:0000134!5.14e-15!46;CL:0000034!1.50e-14!97;CL:0000063!3.33e-13!66;CL:0000049!4.96e-13!19;CL:0000219!3.53e-12!54;CL:0000144!1.54e-11!121;CL:0000012!1.54e-11!121;CL:0000723!1.26e-10!91;CL:0000048!1.26e-10!91;CL:0002371!9.74e-09!118;CL:0002031!2.69e-08!25;CL:0000084!1.41e-07!11;CL:0000827!1.41e-07!11;CL:0000624!1.47e-07!8;CL:0000763!1.65e-07!16;CL:0000838!6.78e-07!12;CL:0000893!7.53e-07!6;CL:0002489!7.53e-07!6;CL:0000898!7.53e-07!6;CL:0000809!7.53e-07!6;CL:0000810!7.53e-07!6;CL:0000895!7.53e-07!6;CL:0000808!7.53e-07!6;CL:0000894!7.53e-07!6;CL:0000806!7.53e-07!6;CL:0000807!7.53e-07!6;CL:0000805!7.53e-07!6;CL:0002425!7.53e-07!6;CL:0002436!7.53e-07!6;CL:0002427!7.53e-07!6;CL:0002428!7.53e-07!6;CL:0002429!7.53e-07!6;CL:0002433!7.53e-07!6;CL:0002431!7.53e-07!6;CL:0002432!7.53e-07!6;CL:0000557!8.59e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,8.47e-19,19;CL:0000557,4.47e-17,7;CL:0000988,5.34e-11,32;CL:0002032,5.34e-11,32;CL:0000037,5.34e-11,32;CL:0000837,5.34e-11,32;CL:0002320,8.17e-10,46;CL:0000134,8.17e-10,46;CL:0000213,5.23e-09,1;CL:0002078,5.23e-09,1;CL:0000115,5.23e-09,1;CL:0002262,5.23e-09,1;CL:1000398,5.23e-09,1;CL:0000034,2.71e-08,97;CL:0000219,2.93e-08,54;CL:0000763,1.24e-07,16;CL:0000723,2.89e-07,91;CL:0000048,2.89e-07,91 | |||
|ontology_enrichment_disease=DOID:0060100!5.76e-09!3;DOID:4045!5.76e-09!3;DOID:0050686!1.65e-07!6 | |ontology_enrichment_disease=DOID:0060100!5.76e-09!3;DOID:4045!5.76e-09!3;DOID:0050686!1.65e-07!6 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.98e-10,3;DOID:4045,1.98e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.14e-15!46 | |ontology_enrichment_uberon=UBERON:0002384!5.14e-15!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.17e-10,46;UBERON:0002394,5.23e-09,1;UBERON:0001281,5.23e-09,1;UBERON:0000353,5.23e-09,1;UBERON:0003497,5.23e-09,1;UBERON:0003909,5.23e-09,1;UBERON:0003928,5.23e-09,1;UBERON:0003835,5.23e-09,1;UBERON:0003513,5.23e-09,1;UBERON:0001280,5.23e-09,1;UBERON:0004647,5.23e-09,1;UBERON:0002294,5.23e-09,1;UBERON:0001173,5.23e-09,1;UBERON:0004912,5.23e-09,1;UBERON:0005171,5.23e-09,1;UBERON:0002204,5.93e-08,32;UBERON:0002371,1.24e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.936258105287974,0,0,0.513602189793617,0.0874204024189974,0,0,0,0,0.137114433605739,0.42438965179803,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0.408338712524738,1.25559489221072,0.7813353445238,1.57057123192139,1.17646297606203,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11620568364698,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87094110079009,12.5979573508616,6.35351135365323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61770549850588,5.91900186363845,4.83077948972507,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,1.81936888020755,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.936258105287974,0,0,0.513602189793617,0.0874204024189974,0,0,0,0,0.137114433605739,0.42438965179803,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0.408338712524738,1.25559489221072,0.7813353445238,1.57057123192139,1.17646297606203,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11620568364698,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87094110079009,12.5979573508616,6.35351135365323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61770549850588,5.91900186363845,4.83077948972507,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,1.81936888020755,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:113188520..113188545,- | |short_description=p@chr6:113188520..113188545,- | ||
}} | }} |
Latest revision as of 21:51, 4 August 2015
Short description: | p@chr6:113188520..113188545, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:113188520..113188545, - |
Coexpression cluster: | MCL_coexpression_mm9:3249 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 8.47e-19 | 19 |
granulocyte monocyte progenitor cell | 4.47e-17 | 7 |
hematopoietic cell | 5.34e-11 | 32 |
hematopoietic oligopotent progenitor cell | 5.34e-11 | 32 |
hematopoietic stem cell | 5.34e-11 | 32 |
hematopoietic multipotent progenitor cell | 5.34e-11 | 32 |
connective tissue cell | 8.17e-10 | 46 |
mesenchymal cell | 8.17e-10 | 46 |
lining cell | 5.23e-09 | 1 |
meso-epithelial cell | 5.23e-09 | 1 |
endothelial cell | 5.23e-09 | 1 |
endothelial cell of sinusoid | 5.23e-09 | 1 |
endothelial cell of hepatic sinusoid | 5.23e-09 | 1 |
stem cell | 2.71e-08 | 97 |
motile cell | 2.93e-08 | 54 |
myeloid cell | 1.24e-07 | 16 |
somatic stem cell | 2.89e-07 | 91 |
multi fate stem cell | 2.89e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.17e-10 | 46 |
bile duct | 5.23e-09 | 1 |
hepatic sinusoid | 5.23e-09 | 1 |
parenchyma | 5.23e-09 | 1 |
abdomen blood vessel | 5.23e-09 | 1 |
sinusoid | 5.23e-09 | 1 |
digestive system duct | 5.23e-09 | 1 |
abdominal segment blood vessel | 5.23e-09 | 1 |
trunk blood vessel | 5.23e-09 | 1 |
liver parenchyma | 5.23e-09 | 1 |
liver lobule | 5.23e-09 | 1 |
biliary system | 5.23e-09 | 1 |
biliary tree | 5.23e-09 | 1 |
biliary bud | 5.23e-09 | 1 |
hepatic duct | 5.23e-09 | 1 |
musculoskeletal system | 5.93e-08 | 32 |
bone marrow | 1.24e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.98e-10 | 3 |
muscle cancer | 1.98e-10 | 3 |