FFCP PHASE1:Hg19::chr11:105831783..105831808,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:105831783..105831808,- | |||
|description=CAGE_peak_at_chr11:105831783..105831808,- | |description=CAGE_peak_at_chr11:105831783..105831808,- | ||
|id=chr11:105831783..105831808,- | |id=chr11:105831783..105831808,- | ||
|ontology_enrichment_celltype=CL:0000039!3.46e-17!7;CL:0000586!3.46e-17!7;CL:0000242!6.13e-08!2 | |ontology_enrichment_celltype=CL:0000039!3.46e-17!7;CL:0000586!3.46e-17!7;CL:0000242!6.13e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.06e-16;7!CL:0000586;3.06e-16;7!CL:0000123;1.04e-14;2!CL:0000242;1.04e-14;2!CL:0002553;1.05e-08;1!CL:0000222;1.18e-08;1!CL:0000313;3.32e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.95e-16,7;CL:0000586,2.95e-16,7;CL:0000242,1.04e-14,2;CL:0000066,4.03e-09,253;CL:0002553,1.05e-08,1;CL:0000313,2.69e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.67e-17;10!UBERON:0005564;2.67e-17;10 | |||
|ontology_enrichment_disease=DOID:0050687!5.27e-20!143;DOID:305!1.65e-19!106;DOID:162!1.00e-16!235;DOID:3095!2.45e-16!22;DOID:2994!2.45e-16!22;DOID:14566!3.70e-16!239;DOID:3119!7.85e-11!14;DOID:5409!5.66e-08!4;DOID:0050686!6.88e-07!137 | |ontology_enrichment_disease=DOID:0050687!5.27e-20!143;DOID:305!1.65e-19!106;DOID:162!1.00e-16!235;DOID:3095!2.45e-16!22;DOID:2994!2.45e-16!22;DOID:14566!3.70e-16!239;DOID:3119!7.85e-11!14;DOID:5409!5.66e-08!4;DOID:0050686!6.88e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.17e-19;22!DOID:2994;5.17e-19;22!DOID:305;2.15e-11;106!DOID:2152;3.32e-08;1!DOID:5662;3.32e-08;1!DOID:3119;3.63e-08;14!DOID:0050619;5.82e-08;1!DOID:1357;5.82e-08;1!DOID:5409;8.53e-08;4!DOID:0050615;4.30e-07;16!DOID:299;9.09e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.36e-27,106;DOID:0050687,1.35e-23,143;DOID:3095,5.84e-19,22;DOID:2994,5.84e-19,22;DOID:162,8.27e-17,235;DOID:14566,2.31e-16,239;DOID:5662,2.50e-08,1;DOID:2152,2.69e-08,1;DOID:3119,3.77e-08,14;DOID:0050619,5.43e-08,1;DOID:1357,5.43e-08,1;DOID:5409,9.14e-08,4;DOID:0050615,4.37e-07,16;DOID:299,8.58e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000473!8.67e-15!8;UBERON:0003135!1.49e-10!11;UBERON:0000991!6.35e-09!21;UBERON:0009196!6.35e-09!21;UBERON:0009117!6.35e-09!21;UBERON:0005564!6.35e-09!21;UBERON:0004176!1.87e-08!22 | |ontology_enrichment_uberon=UBERON:0000473!8.67e-15!8;UBERON:0003135!1.49e-10!11;UBERON:0000991!6.35e-09!21;UBERON:0009196!6.35e-09!21;UBERON:0009117!6.35e-09!21;UBERON:0005564!6.35e-09!21;UBERON:0004176!1.87e-08!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.11e-14;8!UBERON:0003135;2.15e-10;11!UBERON:0004911;3.32e-08;1!UBERON:0000991;3.87e-08;21!UBERON:0001764;5.82e-08;1!UBERON:0001825;5.82e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.00e-14,8;UBERON:0003135,2.10e-10,11;UBERON:0004911,2.69e-08,1;UBERON:0000991,3.64e-08,21;UBERON:0009196,3.64e-08,21;UBERON:0009117,3.64e-08,21;UBERON:0005564,3.64e-08,21;UBERON:0001764,5.43e-08,1;UBERON:0001825,5.43e-08,1;UBERON:0004176,8.77e-08,22 | |||
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| ||
|short_description=p@chr11:105831783..105831808,- | |short_description=p@chr11:105831783..105831808,- | ||
}} | }} |
Latest revision as of 17:44, 23 July 2015
Short description: | p@chr11:105831783..105831808, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:105831783..105831808, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.95e-16 | 7 |
germ cell | 2.95e-16 | 7 |
Merkel cell | 1.04e-14 | 2 |
epithelial cell | 4.03e-09 | 253 |
lung fibroblast | 1.05e-08 | 1 |
serous secreting cell | 2.69e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 3.00e-14 | 8 |
male reproductive organ | 2.10e-10 | 11 |
epithelium of female gonad | 2.69e-08 | 1 |
gonad | 3.64e-08 | 21 |
indifferent external genitalia | 3.64e-08 | 21 |
indifferent gonad | 3.64e-08 | 21 |
gonad primordium | 3.64e-08 | 21 |
maxillary sinus | 5.43e-08 | 1 |
paranasal sinus | 5.43e-08 | 1 |
external genitalia | 8.77e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.36e-27 | 106 |
cell type cancer | 1.35e-23 | 143 |
germ cell and embryonal cancer | 5.84e-19 | 22 |
germ cell cancer | 5.84e-19 | 22 |
cancer | 8.27e-17 | 235 |
disease of cellular proliferation | 2.31e-16 | 239 |
pleomorphic carcinoma | 2.50e-08 | 1 |
ovary epithelial cancer | 2.69e-08 | 1 |
gastrointestinal system cancer | 3.77e-08 | 14 |
paranasal sinus cancer | 5.43e-08 | 1 |
maxillary sinus cancer | 5.43e-08 | 1 |
lung small cell carcinoma | 9.14e-08 | 4 |
respiratory system cancer | 4.37e-07 | 16 |
adenocarcinoma | 8.58e-07 | 25 |