FFCP PHASE1:Hg19::chr10:105211048..105211064,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:105211048..105211064,-
|short_description=p5@CALHM2
|description=CAGE_peak_5_at_CALHM2_5end
|association_with_transcript=2bp_to_uc001kwz.2_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51063 | |EntrezGene=51063 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23493 | |HGNC=23493 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc001kwz.2_5end | |||
|cluster_id=chr10:105211048..105211064,- | |||
|description=CAGE_peak_5_at_CALHM2_5end | |||
|id=chr10:105211048..105211064,- | |||
|ontology_enrichment_celltype=CL:0002194!8.28e-17!63;CL:0000576!8.28e-17!63;CL:0000040!8.28e-17!63;CL:0000559!8.28e-17!63;CL:0002009!9.81e-17!65;CL:0000557!2.68e-16!71;CL:0000839!7.38e-16!70;CL:0000766!1.06e-14!76;CL:0002057!5.13e-13!42;CL:0000860!5.61e-13!45;CL:0000134!7.11e-08!358;CL:0002320!1.22e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.13e-19;48!CL:0000473;1.63e-18;39!CL:0000234;1.63e-18;39!CL:0000235;1.69e-14;6!CL:0000766;4.40e-14;69!CL:0000860;1.43e-13;33!CL:0002057;1.43e-13;33!CL:0000875;9.83e-12;3!CL:0002396;9.83e-12;3!CL:0000153;3.37e-09;9!CL:0000447;3.37e-09;9!CL:0002393;3.78e-09;6!CL:0002397;3.78e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.10e-38,48;CL:0000234,4.10e-38,48;CL:0002194,1.89e-37,59;CL:0000576,1.89e-37,59;CL:0000040,1.89e-37,59;CL:0000559,1.89e-37,59;CL:0002009,5.37e-36,61;CL:0000839,9.61e-33,66;CL:0000557,3.76e-32,67;CL:0000766,1.97e-29,72;CL:0000860,3.28e-27,42;CL:0002057,3.28e-27,42;CL:0002393,5.27e-18,9;CL:0002397,5.27e-18,9;CL:0000763,2.86e-17,108;CL:0000049,2.86e-17,108;CL:0002087,8.57e-16,115;CL:0002031,7.60e-15,120;CL:0000235,1.03e-14,6;CL:0000738,2.73e-12,136;CL:0000875,1.20e-11,3;CL:0002396,1.20e-11,3;CL:0002032,2.41e-09,161;CL:0000837,2.41e-09,161;CL:0000153,2.90e-09,9;CL:0000447,2.90e-09,9;CL:0000037,1.10e-08,168;CL:0000134,2.33e-08,354;CL:0002320,5.30e-08,361;CL:0000988,6.47e-08,177;CL:0000219,9.41e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.51e-21;42!CL:0000049;3.81e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!1.24e-15!101;UBERON:0001434!1.24e-15!101;UBERON:0002371!2.16e-15!80;UBERON:0002390!2.81e-15!102;UBERON:0003061!2.81e-15!102;UBERON:0001474!9.48e-15!86;UBERON:0002193!5.87e-14!112;UBERON:0002204!2.48e-12!167;UBERON:0002405!1.62e-09!115;UBERON:0002384!4.64e-08!375;UBERON:0003081!6.49e-08!216;UBERON:0000926!3.45e-07!448;UBERON:0004120!3.45e-07!448;UBERON:0006603!3.45e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;2.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.19e-32,76;UBERON:0001474,4.06e-29,82;UBERON:0002390,5.24e-29,98;UBERON:0003061,5.24e-29,98;UBERON:0001434,3.08e-28,100;UBERON:0004765,7.40e-26,90;UBERON:0002193,1.50e-25,108;UBERON:0002405,8.87e-25,93;UBERON:0002204,3.82e-17,167;UBERON:0003081,1.56e-15,203;UBERON:0000926,3.12e-10,315;UBERON:0004120,3.12e-10,315;UBERON:0006603,3.12e-10,315;UBERON:0002384,4.14e-08,371;UBERON:0002133,3.52e-07,2 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0,0,2.46307021663917,0.32389366601898,0,4.36194716338694,1.51150377475524,4.85168122375632,0.929716147622738,1.23350366406548,0.309706370895104,1.43846196161075,1.5369642391746,1.18241114944293,0,0,0,2.25890807451126,1.63743690034707,0.898893937780338,0,0.320929027076094,0.639337125799041,7.58657990429447,3.78980949481101,8.09827026012119,0,0,0,0.75374599577023,1.0429658368404,0.434377689410233,0,0,0,2.5350634357433,4.46469029926591,1.25795187305026,0.336985893439485,0.150176892841506,0.16072558669708,4.27519115611873,7.16100037916724,4.01861138282195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,0.334231370655521,0,0,0,0.640456598628376,0.260118695119756,0.657751618414705,1.38175008892924,0.289803085735052,0,0,0,1.13309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.722878304769133,2.00535164254356,1.30361867064741,1.5905718941022,0,0,0,0,0.523916301990851,0,0,1.62273696827342,0.870648686496336,2.39324328933957,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.12663051166458,0.132409180813219,0.860509862246441,0.354668382198357,0,0,0,0.933633106199299,0,0.326923806226917,0.302714855289863,0,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0.491337269247072,0.929932030581889,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0,0.438977620880838,1.22595118319608,0.600952235626387,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0.558350568994769,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0.790204397959275,2.57545848628462,1.72351904261178,10.5301919312657,2.67536092119711,0,0,0,0,0,0.383382679165211,0.492663237895943,0.352193736052904,0,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,1.62868092146868,0,0,0,0.871533458600294,0.199945982364114,4.86495122564762,0,2.10833939483032,0.958499421966331,0,0,0.723906533337896,0.821905290201534,0.179060963239896,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0,0.434418072340414,0,0,0.206768026122887,0,0.213455115606889,0,1.66435439510497,0,0.496215615637554,0.153461973288062,1.12264037773229,0.384417447767103,0,0,0,0.462629081407967,0.532685175939381,0.246381468041427,0,0.697262270759755,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0.154048617114644,0.767518373630648,0,0,0,0.170453254832202,0.267096106940212,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0.636406495851874,0,0,0.274537029736055,0,0.606547444719948,0,0,0,0.243713489631284,0,0,0,2.26016233240486,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,2.9555068941673,4.28083360847872,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0.569647187174163,0,1.64544909234478,0.648473311192717,3.7802200606668,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.879049075631364,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.789147245095469,2.3948309234694,1.11136990144637,0,0,0,0.260427761085233,0,0,0,0,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.769502585037971,0,0,0,0,0.638002319463839,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0.821425535170343,0,0,0,0.330991955875499,0.627865836814451,1.19472429772959,0,0.277349346026277,0,0,0.174118413160805,0.52418000472609,0,0.19351266257817,0.219267951258557,0,0.387956065953678,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0.471388069233591,0.271808412147228,0.313808538937,0.101998217636322,0,0.600420288709789,0,0,0,0,1.11712960508902,0,1.43574604915363,0,0,0.89268582976749,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0.681552087141687,0,0.146552233678082,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0.496166021811951,0.197611631897944,0,0.638341257770182,0,0,0.306345576763462,0,0.157054096250234,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0,0.941063278792687,0,0,1.49254802886874,0.233713309847224,1.10961172300523,0,0.754703705257725,1.77962244319307,0.228840068396924,1.36107831386915,0.15543720058278,0.147855149989634,0,0,0,0.414706207840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| ||
|short_description=p5@CALHM2 | |||
}} | }} |
Latest revision as of 03:35, 16 September 2015
Short description: | p5@CALHM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CALHM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_uc001kwz.2_5end |
EntrezGene: | CALHM2 |
HGNC: | 23493 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.19e-32 | 76 |
bone element | 4.06e-29 | 82 |
hematopoietic system | 5.24e-29 | 98 |
blood island | 5.24e-29 | 98 |
skeletal system | 3.08e-28 | 100 |
skeletal element | 7.40e-26 | 90 |
hemolymphoid system | 1.50e-25 | 108 |
immune system | 8.87e-25 | 93 |
musculoskeletal system | 3.82e-17 | 167 |
lateral plate mesoderm | 1.56e-15 | 203 |
mesoderm | 3.12e-10 | 315 |
mesoderm-derived structure | 3.12e-10 | 315 |
presumptive mesoderm | 3.12e-10 | 315 |
connective tissue | 4.14e-08 | 371 |
atrioventricular valve | 3.52e-07 | 2 |