FFCP PHASE1:Hg19::chr15:90645679..90645753,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3418 | |EntrezGene=3418 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5383 | |HGNC=5383 | ||
|TSSclassifier=strong | |||
|UniProt=P48735,B4DSZ6 | |UniProt=P48735,B4DSZ6 | ||
|association_with_transcript=0bp_to_ENST00000330062,ENST00000539790,ENST00000559482,ENST00000560061,NM_002168,uc002box.2,uc010bnu.2,uc010uqc.1_5end | |association_with_transcript=0bp_to_ENST00000330062,ENST00000539790,ENST00000559482,ENST00000560061,NM_002168,uc002box.2,uc010bnu.2,uc010uqc.1_5end | ||
|cluster_id=chr15:90645679..90645753,- | |||
|description=CAGE_peak_1_at_IDH2_5end | |description=CAGE_peak_1_at_IDH2_5end | ||
|id=chr15:90645679..90645753,- | |id=chr15:90645679..90645753,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.90e-07;15!CL:1000497;5.99e-07;17!CL:0002518;5.99e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.99e-07,15;CL:1000497,6.35e-07,17;CL:0002518,6.35e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!1.96e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.97e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000025!8.56e-09!194;UBERON:0007023!1.99e-08!115;UBERON:0003103!2.89e-08!69;UBERON:0000080!2.39e-07!18;UBERON:0002120!2.39e-07!18;UBERON:0004875!2.39e-07!18;UBERON:0005721!2.39e-07!18;UBERON:0005754!2.39e-07!18;UBERON:0007297!2.39e-07!18;UBERON:0004876!3.14e-07!20;UBERON:0006555!6.29e-07!17;UBERON:0005103!6.29e-07!17;UBERON:0000083!6.29e-07!17;UBERON:0009201!6.29e-07!17;UBERON:0004819!6.29e-07!17;UBERON:0006553!6.29e-07!17;UBERON:0003074!6.29e-07!17;UBERON:0003060!6.29e-07!17;UBERON:0003914!6.83e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.90e-07;15!UBERON:0004819;1.90e-07;15!UBERON:0001285;1.90e-07;15!UBERON:0007684;1.90e-07;15!UBERON:0000353;9.56e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.13e-09,192;UBERON:0003103,1.33e-08,68;UBERON:0007023,1.83e-08,114;UBERON:0006555,1.02e-07,16;UBERON:0004819,1.02e-07,16;UBERON:0004211,1.99e-07,15;UBERON:0009773,1.99e-07,15;UBERON:0001231,1.99e-07,15;UBERON:0001285,1.99e-07,15;UBERON:0007684,1.99e-07,15;UBERON:0004208,1.99e-07,15;UBERON:0003914,4.17e-07,117;UBERON:0000489,4.68e-07,31;UBERON:0000119,5.19e-07,309;UBERON:0000483,5.59e-07,306;UBERON:0000353,9.59e-07,15 | |||
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4.772205043862 | ||
|short_description=p1@IDH2 | |short_description=p1@IDH2 | ||
}} | }} |
Latest revision as of 19:17, 19 September 2015
Short description: | p1@IDH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IDH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000330062, ENST00000539790, ENST00000559482, ENST00000560061, NM_002168, uc002box.2, uc010bnu.2, uc010uqc.1_5end |
EntrezGene: | IDH2 |
HGNC: | 5383 |
UniProt: | P48735B4DSZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.99e-07 | 15 |
kidney cell | 6.35e-07 | 17 |
kidney epithelial cell | 6.35e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
tube | 4.13e-09 | 192 |
compound organ | 1.33e-08 | 68 |
adult organism | 1.83e-08 | 114 |
excretory tube | 1.02e-07 | 16 |
kidney epithelium | 1.02e-07 | 16 |
nephron epithelium | 1.99e-07 | 15 |
renal tubule | 1.99e-07 | 15 |
nephron tubule | 1.99e-07 | 15 |
nephron | 1.99e-07 | 15 |
uriniferous tubule | 1.99e-07 | 15 |
nephrogenic mesenchyme | 1.99e-07 | 15 |
epithelial tube | 4.17e-07 | 117 |
cavitated compound organ | 4.68e-07 | 31 |
cell layer | 5.19e-07 | 309 |
epithelium | 5.59e-07 | 306 |
parenchyma | 9.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.97e-07 | 39 |