FFCP PHASE1:Hg19::chr16:56717951..56717970,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:56717951..56717970,+ | |||
|coexpression_cluster_id=C2378 | |||
|description=CAGE_peak_at_chr16:56717951..56717970,+ | |description=CAGE_peak_at_chr16:56717951..56717970,+ | ||
|id=chr16:56717951..56717970,+ | |id=chr16:56717951..56717970,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.58e-17!115;UBERON:0001049!9.77e-10!57;UBERON:0005068!9.77e-10!57;UBERON:0006241!9.77e-10!57;UBERON:0007135!9.77e-10!57;UBERON:0000481!2.18e-09!347;UBERON:0002616!3.79e-08!59;UBERON:0004119!4.32e-08!169;UBERON:0000925!4.32e-08!169;UBERON:0006595!4.32e-08!169;UBERON:0004921!7.26e-08!129;UBERON:0004185!7.26e-08!129;UBERON:0001017!1.10e-07!82;UBERON:0002020!1.13e-07!34;UBERON:0003528!1.13e-07!34;UBERON:0002780!3.03e-07!41;UBERON:0001890!3.03e-07!41;UBERON:0006240!3.03e-07!41;UBERON:0000955!3.62e-07!69;UBERON:0006238!3.62e-07!69;UBERON:0000065!4.69e-07!53;UBERON:0001041!5.53e-07!98;UBERON:0001004!5.55e-07!72;UBERON:0003080!7.44e-07!42;UBERON:0002346!8.52e-07!90;UBERON:0001007!9.92e-07!155;UBERON:0001555!9.92e-07!155;UBERON:0007026!9.92e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;1.73e-09;9!UBERON:0002308;1.73e-09;9!UBERON:0003528;7.71e-08;34!UBERON:0002020;7.71e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.50e-14,114;UBERON:0000125,9.68e-10,9;UBERON:0002308,9.68e-10,9;UBERON:0003528,3.93e-09,34;UBERON:0002020,3.93e-09,34;UBERON:0001049,1.25e-08,56;UBERON:0005068,1.25e-08,56;UBERON:0006241,1.25e-08,56;UBERON:0007135,1.25e-08,56;UBERON:0000073,4.03e-08,53;UBERON:0002616,4.03e-08,53;UBERON:0003075,4.32e-08,82;UBERON:0007284,4.32e-08,82;UBERON:0011216,1.21e-07,223;UBERON:0002346,1.72e-07,86;UBERON:0002791,8.56e-07,32;UBERON:0001869,8.56e-07,32;UBERON:0002420,9.17e-07,9;UBERON:0007245,9.17e-07,9;UBERON:0010009,9.17e-07,9;UBERON:0010011,9.17e-07,9;UBERON:0000454,9.17e-07,9 | |||
|phase1_expression=0,1.2846031433459,0.563817616383885,0,3.5756887554183,0,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0.458480434487708,0,0.0787107813136792,0,0,0,5.51652734687356,2.409647350226,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0,0.263504357079378,0.0654895377488563,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0.496971951695318,0,0,0,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0.234321431833797,0.624320153660641,0,0.448346041655403,0,0.323745888736263,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,0,0.487894824518382,0.132529768321485,0.348581828608555,0.310983165046111,0,1.45990943630332,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0.653638332277218,0,0.134831308160164,0.588664395376038,0,0,0,0,0,2.53510069643662,12.7767538168091,13.5881678536723,0,0,0.343135620597051,0.329250856225877,0,0.201057944823262,0.648119116109707,0,1.03993478527958,0,0,0,0,0,0.380508304469197,0,0,0,0.468008530278475,1.48631162288728,0.93733833986777,0.335964256397719,0.141775097242386,0,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0.723906533337896,1.2328579353023,0.179060963239896,0.448340575974109,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0.343143423810856,0.206768026122887,0,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0.308419387605311,0,0.0821271560138091,0.519254429183621,0,0,2.80709058424599,0.552485933615378,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,1.33953315142039,0.0915694648183434,0,0,1.30012049207304,0,0,0.462145851343933,1.22802939780904,0.551346289938122,1.07420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0.826424576804891,0.576570202095319,0.127612712494584,0.4046311234222,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0,0,0,0.42793898803392,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0,0.962221127255121,0.670302275535787,1.08890984861323,2.82431402330337,0.43050537267123,5.05414427002877,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,2.8853842595289,0,0.159426272728822,0.199579371432817,0,0.635020748171649,0,0,2.28234679033192,0.156679895773023,0,0,0.321176150207399,0.403599414382095,0.425846237690326,1.03051603426729,0,0,0,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0,0.568272293612826,0,0.296964680832639,0,1.9882952955326,0.281338832821026,0,0,0,0.796991953004279,0.828851746593443,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,3.30001000027949,0.762760950878299,0.236387681767936,1.03423011972439,0,0,1.77148277162768,0.60298219312704,1.52581736317083,0,0.295547618953547,1.09692698576986,0,0,0.0769502585037971,0.227884111694002,0.46112780877612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.796118080530053,9.77648231893801,0,0.123563938946503,0.208843899010911,0,0.802577647298789,0.702793337176017,0.364909578431332,0.19566461893209,0,0.394584402849391,2.41981432097328,0,0.189559738885464,0,0.207376382794494,0,0.330991955875499,0,0,0,0.138674673013139,0.347119476670262,0,0.174118413160805,1.39781334593624,0,0,0,0.0821154570532092,1.26085721434945,0,0.451961481561065,0,0,0.0633107959558787,0.977756913674015,0,0.213452994739353,0.19980960958213,0,0.229073192331831,0,0.14405479798815,0,0.942776138467182,0.271808412147228,0,0.203996435272644,0,3.00210144354895,1.77976992559591,0,0,0.525774708558629,1.67569440763353,0,20.1004446881508,0.798716001995964,0.858452096273142,3.79391477651183,0,0.360299883542404,1.16495949527454,0,0.247247575143499,0,0,0.169346664131569,2.38568906942791,0.272406812223151,0.803765742325096,0.825236619583403,0.83088067605837,0,0,0,0,0.315222829196793,0.0524545881349981,0.105600336519406,0,0.383830394638891,0,3.31045985182716,0.25426853765475,1.08599920350743,0.864221491201268,0,0,0.164185041498678,0,0,3.81035807563014,6.62534444561107,6.98127964352373,1.85125642439766,0,0,0.533937062838473,0.471612915298998,0.828478110694391,0.496166021811951,0.197611631897944,0,1.2766825155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| ||
|short_description=p@chr16:56717951..56717970,+ | |short_description=p@chr16:56717951..56717970,+ | ||
}} | }} |
Latest revision as of 10:24, 25 July 2015
Short description: | p@chr16:56717951..56717970, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:56717951..56717970, + |
Coexpression cluster: | C2378_Hepatocyte_skeletal_heart_liver_medulla_colon_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.50e-14 | 114 |
neural nucleus | 9.68e-10 | 9 |
nucleus of brain | 9.68e-10 | 9 |
brain grey matter | 3.93e-09 | 34 |
gray matter | 3.93e-09 | 34 |
neural tube | 1.25e-08 | 56 |
neural rod | 1.25e-08 | 56 |
future spinal cord | 1.25e-08 | 56 |
neural keel | 1.25e-08 | 56 |
regional part of nervous system | 4.03e-08 | 53 |
regional part of brain | 4.03e-08 | 53 |
neural plate | 4.32e-08 | 82 |
presumptive neural plate | 4.32e-08 | 82 |
organ system subdivision | 1.21e-07 | 223 |
neurectoderm | 1.72e-07 | 86 |
regional part of telencephalon | 8.56e-07 | 32 |
cerebral hemisphere | 8.56e-07 | 32 |
basal ganglion | 9.17e-07 | 9 |
nuclear complex of neuraxis | 9.17e-07 | 9 |
aggregate regional part of brain | 9.17e-07 | 9 |
collection of basal ganglia | 9.17e-07 | 9 |
cerebral subcortex | 9.17e-07 | 9 |