FFCP PHASE1:Hg19::chr10:35625414..35625477,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:35625414..35625477,+
|short_description=p1@CCNY
|description=CAGE_peak_1_at_CCNY_5end
|association_with_transcript=0bp_to_ENST00000537547_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=219771 | |EntrezGene=219771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23354 | |HGNC=23354 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000537547_5end | |||
|cluster_id=chr10:35625414..35625477,+ | |||
|description=CAGE_peak_1_at_CCNY_5end | |||
|id=chr10:35625414..35625477,+ | |||
|ontology_enrichment_celltype=CL:0000115!2.70e-16!35;CL:0002139!2.01e-13!24;CL:0002078!2.10e-13!44;CL:0000071!2.52e-11!18;CL:0002546!2.52e-11!18;CL:0000213!6.71e-11!57;CL:0000215!6.71e-11!57;CL:0000003!1.10e-10!722;CL:0000222!1.32e-10!119;CL:0000144!9.12e-09!625;CL:0002371!1.45e-08!591;CL:0002057!1.55e-08!42;CL:0000860!6.49e-07!45;CL:1000413!7.60e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.77e-14;36!CL:0002139;1.79e-13;24!CL:0000071;2.51e-11;18!CL:0002078;1.47e-09;45!CL:1000413;7.64e-07;9!CL:0000213;7.87e-07;58!CL:0000215;7.87e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.45e-17,36;CL:0002078,7.69e-14,45;CL:0002139,2.01e-13,24;CL:0000071,2.52e-11,18;CL:0002546,2.52e-11,18;CL:0000213,2.72e-11,58;CL:0000215,2.72e-11,58;CL:0000222,1.32e-10,121;CL:0000860,1.55e-08,42;CL:0002057,1.55e-08,42;CL:1000413,7.60e-07,9;CL:0000473,9.24e-07,48;CL:0000234,9.24e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002546;2.51e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.66e-17!110;UBERON:0001009!1.79e-16!113;UBERON:0000055!7.07e-14!69;UBERON:0004872!1.82e-13!84;UBERON:0002049!9.19e-13!79;UBERON:0007798!9.19e-13!79;UBERON:0003914!5.52e-12!118;UBERON:0003081!8.74e-12!216;UBERON:0001986!2.52e-11!18;UBERON:0004638!2.52e-11!18;UBERON:0004852!2.52e-11!18;UBERON:0001981!3.26e-11!60;UBERON:0007500!3.26e-11!60;UBERON:0004537!3.26e-11!60;UBERON:0006965!3.26e-11!60;UBERON:0000487!3.14e-10!22;UBERON:0006914!7.10e-10!25;UBERON:0000490!3.00e-08!138;UBERON:0001637!2.20e-07!42;UBERON:0003509!2.20e-07!42;UBERON:0004572!2.20e-07!42;UBERON:0003915!7.60e-07!9;UBERON:0004700!7.60e-07!9;UBERON:0001917!7.60e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.51e-11;18!UBERON:0001986;2.51e-11;18!UBERON:0004852;2.51e-11;18!UBERON:0000487;2.91e-10;22!UBERON:0006914;6.81e-10;25!UBERON:0000490;3.37e-08;33!UBERON:0000055;7.31e-08;65!UBERON:0007500;2.43e-07;56!UBERON:0001981;2.43e-07;56!UBERON:0004537;2.43e-07;56!UBERON:0003915;7.64e-07;9!UBERON:0004700;7.64e-07;9!UBERON:0001917;7.64e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.21e-17,109;UBERON:0001009,1.34e-16,112;UBERON:0000055,4.69e-14,68;UBERON:0004872,1.32e-13,83;UBERON:0003081,4.20e-13,203;UBERON:0002049,6.63e-13,78;UBERON:0007798,6.63e-13,78;UBERON:0003914,2.45e-12,117;UBERON:0007500,2.23e-11,59;UBERON:0001981,2.23e-11,59;UBERON:0004537,2.23e-11,59;UBERON:0006965,2.23e-11,59;UBERON:0004638,2.52e-11,18;UBERON:0001986,2.52e-11,18;UBERON:0004852,2.52e-11,18;UBERON:0000926,2.52e-10,315;UBERON:0004120,2.52e-10,315;UBERON:0006603,2.52e-10,315;UBERON:0000487,3.14e-10,22;UBERON:0006914,7.10e-10,25;UBERON:0001637,2.20e-07,42;UBERON:0003509,2.20e-07,42;UBERON:0004572,2.20e-07,42;UBERON:0000490,4.48e-07,148;UBERON:0003915,7.60e-07,9;UBERON:0004700,7.60e-07,9;UBERON:0001917,7.60e-07,9 | |||
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| ||
|short_description=p1@CCNY | |||
}} | }} |
Latest revision as of 01:58, 18 September 2015
Short description: | p1@CCNY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCNY_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000537547_5end |
EntrezGene: | CCNY |
HGNC: | 23354 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.45e-17 | 36 |
meso-epithelial cell | 7.69e-14 | 45 |
endothelial cell of vascular tree | 2.01e-13 | 24 |
blood vessel endothelial cell | 2.52e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.52e-11 | 18 |
lining cell | 2.72e-11 | 58 |
barrier cell | 2.72e-11 | 58 |
mesodermal cell | 1.32e-10 | 121 |
classical monocyte | 1.55e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.55e-08 | 42 |
endothelial cell of artery | 7.60e-07 | 9 |
defensive cell | 9.24e-07 | 48 |
phagocyte | 9.24e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.21e-17 | 109 |
circulatory system | 1.34e-16 | 112 |
vessel | 4.69e-14 | 68 |
splanchnic layer of lateral plate mesoderm | 1.32e-13 | 83 |
lateral plate mesoderm | 4.20e-13 | 203 |
vasculature | 6.63e-13 | 78 |
vascular system | 6.63e-13 | 78 |
epithelial tube | 2.45e-12 | 117 |
epithelial tube open at both ends | 2.23e-11 | 59 |
blood vessel | 2.23e-11 | 59 |
blood vasculature | 2.23e-11 | 59 |
vascular cord | 2.23e-11 | 59 |
blood vessel endothelium | 2.52e-11 | 18 |
endothelium | 2.52e-11 | 18 |
cardiovascular system endothelium | 2.52e-11 | 18 |
mesoderm | 2.52e-10 | 315 |
mesoderm-derived structure | 2.52e-10 | 315 |
presumptive mesoderm | 2.52e-10 | 315 |
simple squamous epithelium | 3.14e-10 | 22 |
squamous epithelium | 7.10e-10 | 25 |
artery | 2.20e-07 | 42 |
arterial blood vessel | 2.20e-07 | 42 |
arterial system | 2.20e-07 | 42 |
unilaminar epithelium | 4.48e-07 | 148 |
endothelial tube | 7.60e-07 | 9 |
arterial system endothelium | 7.60e-07 | 9 |
endothelium of artery | 7.60e-07 | 9 |