FFCP PHASE1:Hg19::chr17:1248207..1248301,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5048 | |EntrezGene=5048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8574 | |HGNC=8574 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=63bp_to_L13388_5end | |association_with_transcript=63bp_to_L13388_5end | ||
|cluster_id=chr17:1248207..1248301,- | |||
|description=CAGE_peak_3_at_PAFAH1B1_5end | |description=CAGE_peak_3_at_PAFAH1B1_5end | ||
|id=chr17:1248207..1248301,- | |id=chr17:1248207..1248301,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.36e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.72e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.72e-10!94;UBERON:0001016!5.72e-10!94;UBERON:0001017!7.19e-10!82;UBERON:0000468!1.20e-09!659;UBERON:0001049!4.33e-09!57;UBERON:0005068!4.33e-09!57;UBERON:0006241!4.33e-09!57;UBERON:0007135!4.33e-09!57;UBERON:0005743!6.52e-09!86;UBERON:0000924!8.30e-09!173;UBERON:0006601!8.30e-09!173;UBERON:0004121!2.77e-08!169;UBERON:0002020!6.35e-08!34;UBERON:0003528!6.35e-08!34;UBERON:0003080!1.81e-07!42;UBERON:0000480!3.36e-07!626;UBERON:0000467!3.46e-07!625;UBERON:0002780!3.50e-07!41;UBERON:0001890!3.50e-07!41;UBERON:0006240!3.50e-07!41;UBERON:0000062!4.27e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.45e-07;34!UBERON:0002020;2.45e-07;34!UBERON:0002791;3.42e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.29e-10,89;UBERON:0001017,1.54e-09,81;UBERON:0004121,6.63e-09,171;UBERON:0000924,6.63e-09,171;UBERON:0006601,6.63e-09,171;UBERON:0001049,8.27e-09,56;UBERON:0005068,8.27e-09,56;UBERON:0006241,8.27e-09,56;UBERON:0007135,8.27e-09,56;UBERON:0011216,1.09e-08,223;UBERON:0003528,4.17e-08,34;UBERON:0002020,4.17e-08,34;UBERON:0000073,1.13e-07,53;UBERON:0002616,1.13e-07,53;UBERON:0002780,2.42e-07,41;UBERON:0001890,2.42e-07,41;UBERON:0003080,2.42e-07,41;UBERON:0006240,2.42e-07,41;UBERON:0002791,3.22e-07,32 | |||
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| ||
|short_description=p3@PAFAH1B1 | |short_description=p3@PAFAH1B1 | ||
}} | }} |
Latest revision as of 16:13, 18 September 2015
Short description: | p3@PAFAH1B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAFAH1B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_L13388_5end |
EntrezGene: | PAFAH1B1 |
HGNC: | 8574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.29e-10 | 89 |
central nervous system | 1.54e-09 | 81 |
ectoderm-derived structure | 6.63e-09 | 171 |
ectoderm | 6.63e-09 | 171 |
presumptive ectoderm | 6.63e-09 | 171 |
neural tube | 8.27e-09 | 56 |
neural rod | 8.27e-09 | 56 |
future spinal cord | 8.27e-09 | 56 |
neural keel | 8.27e-09 | 56 |
organ system subdivision | 1.09e-08 | 223 |
brain grey matter | 4.17e-08 | 34 |
gray matter | 4.17e-08 | 34 |
regional part of nervous system | 1.13e-07 | 53 |
regional part of brain | 1.13e-07 | 53 |
regional part of forebrain | 2.42e-07 | 41 |
forebrain | 2.42e-07 | 41 |
anterior neural tube | 2.42e-07 | 41 |
future forebrain | 2.42e-07 | 41 |
regional part of telencephalon | 3.22e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.72e-07 | 143 |