FFCP PHASE1:Hg19::chr10:72576021..72576064,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:72576021..72576064,+
|short_description=p3@SGPL1
|description=CAGE_peak_3_at_SGPL1_5end
|association_with_transcript=-75bp_to_AK314615_5end
|EntrezGene=8...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8879 | |EntrezGene=8879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10817 | |HGNC=10817 | ||
|TSSclassifier=strong | |||
|UniProt=O95470 | |UniProt=O95470 | ||
|association_with_transcript=-75bp_to_AK314615_5end | |||
|cluster_id=chr10:72576021..72576064,+ | |||
|coexpression_cluster_id=C3041 | |||
|description=CAGE_peak_3_at_SGPL1_5end | |||
|id=chr10:72576021..72576064,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.15e-12!63;CL:0000576!1.15e-12!63;CL:0000040!1.15e-12!63;CL:0000559!1.15e-12!63;CL:0002009!2.31e-12!65;CL:0000557!1.36e-10!71;CL:0000839!2.47e-10!70;CL:0002057!3.12e-10!42;CL:0000860!6.22e-10!45;CL:0000766!9.53e-10!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.17e-29;39!CL:0000234;4.17e-29;39!CL:0000860;1.11e-26;33!CL:0002057;1.11e-26;33!CL:0000576;2.51e-15;48!CL:0000235;5.91e-13;6!CL:0000766;2.15e-11;69!CL:0002619;8.96e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,6.79e-35,59;CL:0000576,6.79e-35,59;CL:0000040,6.79e-35,59;CL:0000559,6.79e-35,59;CL:0002009,2.13e-33,61;CL:0000839,4.74e-30,66;CL:0000473,7.63e-30,48;CL:0000234,7.63e-30,48;CL:0000557,1.93e-29,67;CL:0000766,1.19e-26,72;CL:0000860,9.45e-21,42;CL:0002057,9.45e-21,42;CL:0000763,2.62e-14,108;CL:0000049,2.62e-14,108;CL:0000235,4.77e-13,6;CL:0002087,7.75e-13,115;CL:0002031,6.73e-12,120;CL:0000738,2.14e-09,136;CL:0002619,9.06e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.52e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!5.45e-16!511;UBERON:0000922!1.32e-15!612;UBERON:0000923!1.37e-14!604;UBERON:0005291!1.37e-14!604;UBERON:0006598!1.37e-14!604;UBERON:0002532!1.37e-14!604;UBERON:0002050!2.34e-14!605;UBERON:0005423!2.34e-14!605;UBERON:0000468!1.10e-13!659;UBERON:0000480!2.22e-12!626;UBERON:0000467!2.35e-12!625;UBERON:0000926!8.84e-12!448;UBERON:0004120!8.84e-12!448;UBERON:0006603!8.84e-12!448;UBERON:0001474!1.97e-08!86;UBERON:0002371!2.23e-08!80;UBERON:0004119!6.84e-08!169;UBERON:0000925!6.84e-08!169;UBERON:0006595!6.84e-08!169;UBERON:0000481!7.61e-08!347;UBERON:0004765!2.66e-07!101;UBERON:0001434!2.66e-07!101;UBERON:0001007!6.05e-07!155;UBERON:0001555!6.05e-07!155;UBERON:0007026!6.05e-07!155 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-24,76;UBERON:0001474,4.19e-22,82;UBERON:0004765,1.37e-20,90;UBERON:0002405,1.57e-19,93;UBERON:0002390,2.69e-19,98;UBERON:0003061,2.69e-19,98;UBERON:0001434,1.83e-17,100;UBERON:0002193,1.66e-16,108;UBERON:0003081,1.39e-09,203;UBERON:0002204,2.42e-08,167;UBERON:0000926,3.42e-08,315;UBERON:0004120,3.42e-08,315;UBERON:0006603,3.42e-08,315;UBERON:0002050,1.22e-07,564;UBERON:0000923,2.40e-07,560;UBERON:0010316,2.40e-07,560;UBERON:0005291,2.40e-07,560;UBERON:0006598,2.40e-07,560;UBERON:0010317,2.40e-07,560;UBERON:0002532,2.40e-07,560;UBERON:0005423,8.66e-07,581;UBERON:0000160,9.30e-07,17 | |||
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| ||
|short_description=p3@SGPL1 | |||
}} | }} |
Latest revision as of 02:53, 19 September 2015
Short description: | p3@SGPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SGPL1_5end |
Coexpression cluster: | C3041_CD14_maxillary_Dendritic_Macrophage_Monocytederived_alveolar_umbilical |
Association with transcript: | -75bp_to_AK314615_5end |
EntrezGene: | SGPL1 |
HGNC: | 10817 |
UniProt: | O95470 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 6.79e-35 | 59 |
monocyte | 6.79e-35 | 59 |
monoblast | 6.79e-35 | 59 |
promonocyte | 6.79e-35 | 59 |
macrophage dendritic cell progenitor | 2.13e-33 | 61 |
myeloid lineage restricted progenitor cell | 4.74e-30 | 66 |
defensive cell | 7.63e-30 | 48 |
phagocyte | 7.63e-30 | 48 |
granulocyte monocyte progenitor cell | 1.93e-29 | 67 |
myeloid leukocyte | 1.19e-26 | 72 |
classical monocyte | 9.45e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.45e-21 | 42 |
myeloid cell | 2.62e-14 | 108 |
common myeloid progenitor | 2.62e-14 | 108 |
macrophage | 4.77e-13 | 6 |
nongranular leukocyte | 7.75e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.73e-12 | 120 |
leukocyte | 2.14e-09 | 136 |
adult endothelial progenitor cell | 9.06e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.10e-24 | 76 |
bone element | 4.19e-22 | 82 |
skeletal element | 1.37e-20 | 90 |
immune system | 1.57e-19 | 93 |
hematopoietic system | 2.69e-19 | 98 |
blood island | 2.69e-19 | 98 |
skeletal system | 1.83e-17 | 100 |
hemolymphoid system | 1.66e-16 | 108 |
lateral plate mesoderm | 1.39e-09 | 203 |
musculoskeletal system | 2.42e-08 | 167 |
mesoderm | 3.42e-08 | 315 |
mesoderm-derived structure | 3.42e-08 | 315 |
presumptive mesoderm | 3.42e-08 | 315 |
embryonic structure | 1.22e-07 | 564 |
germ layer | 2.40e-07 | 560 |
germ layer / neural crest | 2.40e-07 | 560 |
embryonic tissue | 2.40e-07 | 560 |
presumptive structure | 2.40e-07 | 560 |
germ layer / neural crest derived structure | 2.40e-07 | 560 |
epiblast (generic) | 2.40e-07 | 560 |
developing anatomical structure | 8.66e-07 | 581 |
intestine | 9.30e-07 | 17 |