FFCP PHASE1:Hg19::chr12:20171393..20171395,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:20171393..20171395,+ | |||
|description=CAGE_peak_at_chr12:20171393..20171395,+ | |description=CAGE_peak_at_chr12:20171393..20171395,+ | ||
|id=chr12:20171393..20171395,+ | |id=chr12:20171393..20171395,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;1.07e-15;1!CL:0000159;1.67e-08;2!CL:0002253;1.67e-08;2!CL:1000415;1.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,7.46e-16,1;CL:0000159,1.39e-08,2;CL:1000415,1.50e-08,2;CL:0002253,1.61e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.25e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;1.07e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,7.46e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002619!5.30e-24!22;UBERON:0002020!3.68e-23!34;UBERON:0003528!3.68e-23!34;UBERON:0001869!1.17e-22!32;UBERON:0001893!5.92e-21!34;UBERON:0001950!6.19e-21!20;UBERON:0000956!1.49e-20!25;UBERON:0000203!1.49e-20!25;UBERON:0002780!5.97e-20!41;UBERON:0001890!5.97e-20!41;UBERON:0006240!5.97e-20!41;UBERON:0002791!8.28e-20!33;UBERON:0007023!1.50e-19!115;UBERON:0001049!1.62e-19!57;UBERON:0005068!1.62e-19!57;UBERON:0006241!1.62e-19!57;UBERON:0007135!1.62e-19!57;UBERON:0003080!2.62e-19!42;UBERON:0002616!1.46e-18!59;UBERON:0000955!1.13e-16!69;UBERON:0006238!1.13e-16!69;UBERON:0002346!1.89e-16!90;UBERON:0001017!7.37e-15!82;UBERON:0005743!1.10e-14!86;UBERON:0003075!5.23e-14!86;UBERON:0007284!5.23e-14!86;UBERON:0000073!1.70e-13!94;UBERON:0001016!1.70e-13!94;UBERON:0003056!3.77e-12!61;UBERON:0001871!6.88e-11!7;UBERON:0000200!7.08e-11!6;UBERON:0000033!5.07e-07!123;UBERON:0000025!5.22e-07!194;UBERON:0002294!5.49e-07!7;UBERON:0001173!5.49e-07!7;UBERON:0004912!5.49e-07!7;UBERON:0000153!5.51e-07!129;UBERON:0007811!5.51e-07!129;UBERON:0000924!6.23e-07!173;UBERON:0006601!6.23e-07!173;UBERON:0000064!8.72e-07!219 | |ontology_enrichment_uberon=UBERON:0002619!5.30e-24!22;UBERON:0002020!3.68e-23!34;UBERON:0003528!3.68e-23!34;UBERON:0001869!1.17e-22!32;UBERON:0001893!5.92e-21!34;UBERON:0001950!6.19e-21!20;UBERON:0000956!1.49e-20!25;UBERON:0000203!1.49e-20!25;UBERON:0002780!5.97e-20!41;UBERON:0001890!5.97e-20!41;UBERON:0006240!5.97e-20!41;UBERON:0002791!8.28e-20!33;UBERON:0007023!1.50e-19!115;UBERON:0001049!1.62e-19!57;UBERON:0005068!1.62e-19!57;UBERON:0006241!1.62e-19!57;UBERON:0007135!1.62e-19!57;UBERON:0003080!2.62e-19!42;UBERON:0002616!1.46e-18!59;UBERON:0000955!1.13e-16!69;UBERON:0006238!1.13e-16!69;UBERON:0002346!1.89e-16!90;UBERON:0001017!7.37e-15!82;UBERON:0005743!1.10e-14!86;UBERON:0003075!5.23e-14!86;UBERON:0007284!5.23e-14!86;UBERON:0000073!1.70e-13!94;UBERON:0001016!1.70e-13!94;UBERON:0003056!3.77e-12!61;UBERON:0001871!6.88e-11!7;UBERON:0000200!7.08e-11!6;UBERON:0000033!5.07e-07!123;UBERON:0000025!5.22e-07!194;UBERON:0002294!5.49e-07!7;UBERON:0001173!5.49e-07!7;UBERON:0004912!5.49e-07!7;UBERON:0000153!5.51e-07!129;UBERON:0007811!5.51e-07!129;UBERON:0000924!6.23e-07!173;UBERON:0006601!6.23e-07!173;UBERON:0000064!8.72e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0002702;8.06e-29;2!UBERON:0001870;1.39e-19;3!UBERON:0002294;5.40e-19;7!UBERON:0001173;5.40e-19;7!UBERON:0002619;2.38e-15;22!UBERON:0001282;2.56e-15;1!UBERON:0009842;2.56e-15;1!UBERON:0003704;2.56e-15;1!UBERON:0001171;2.56e-15;1!UBERON:0001172;2.56e-15;1!UBERON:0002394;2.96e-15;4!UBERON:0003928;2.96e-15;4!UBERON:0000956;1.39e-13;25!UBERON:0000203;1.39e-13;25!UBERON:0001950;4.38e-11;20!UBERON:0000200;2.77e-10;6!UBERON:0002791;2.79e-10;32!UBERON:0001869;3.46e-10;32!UBERON:0003528;1.71e-09;34!UBERON:0002020;1.71e-09;34!UBERON:0001893;8.56e-09;34!UBERON:0001954;2.57e-08;2!UBERON:0003022;2.57e-08;2!UBERON:0002421;2.57e-08;2!UBERON:0002600;2.57e-08;2!UBERON:0002780;8.67e-07;41!UBERON:0001890;8.67e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,9.30e-29,2;UBERON:0001870,1.53e-19,3;UBERON:0001282,1.78e-15,1;UBERON:0009842,1.78e-15,1;UBERON:0003704,1.78e-15,1;UBERON:0001171,1.78e-15,1;UBERON:0001172,1.78e-15,1;UBERON:0002619,2.65e-15,22;UBERON:0002294,5.40e-15,9;UBERON:0001173,5.40e-15,9;UBERON:0004912,5.40e-15,9;UBERON:0000956,1.53e-13,25;UBERON:0000203,1.53e-13,25;UBERON:0001950,4.87e-11,20;UBERON:0002791,1.14e-10,32;UBERON:0001869,1.14e-10,32;UBERON:0002394,1.57e-10,6;UBERON:0003928,1.57e-10,6;UBERON:0000200,2.90e-10,6;UBERON:0003528,4.63e-10,34;UBERON:0002020,4.63e-10,34;UBERON:0001893,4.63e-10,34;UBERON:0002780,2.23e-08,41;UBERON:0001890,2.23e-08,41;UBERON:0003080,2.23e-08,41;UBERON:0006240,2.23e-08,41;UBERON:0001954,2.48e-08,2;UBERON:0003022,2.48e-08,2;UBERON:0002421,2.48e-08,2;UBERON:0002600,2.48e-08,2 | |||
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| ||
|short_description=p@chr12:20171393..20171395,+ | |short_description=p@chr12:20171393..20171395,+ | ||
}} | }} |
Latest revision as of 07:25, 24 July 2015
Short description: | p@chr12:20171393..20171395, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:20171393..20171395, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 7.46e-16 | 1 |
seromucus secreting cell | 1.39e-08 | 2 |
epithelial cell of gall bladder | 1.50e-08 | 2 |
epithelial cell of large intestine | 1.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 9.30e-29 | 2 |
frontal cortex | 1.53e-19 | 3 |
intralobular bile duct | 1.78e-15 | 1 |
acinus | 1.78e-15 | 1 |
intrahepatic bile duct | 1.78e-15 | 1 |
portal lobule | 1.78e-15 | 1 |
hepatic acinus | 1.78e-15 | 1 |
regional part of cerebral cortex | 2.65e-15 | 22 |
biliary system | 5.40e-15 | 9 |
biliary tree | 5.40e-15 | 9 |
biliary bud | 5.40e-15 | 9 |
cerebral cortex | 1.53e-13 | 25 |
pallium | 1.53e-13 | 25 |
neocortex | 4.87e-11 | 20 |
regional part of telencephalon | 1.14e-10 | 32 |
cerebral hemisphere | 1.14e-10 | 32 |
bile duct | 1.57e-10 | 6 |
digestive system duct | 1.57e-10 | 6 |
gyrus | 2.90e-10 | 6 |
brain grey matter | 4.63e-10 | 34 |
gray matter | 4.63e-10 | 34 |
telencephalon | 4.63e-10 | 34 |
regional part of forebrain | 2.23e-08 | 41 |
forebrain | 2.23e-08 | 41 |
anterior neural tube | 2.23e-08 | 41 |
future forebrain | 2.23e-08 | 41 |
Ammon's horn | 2.48e-08 | 2 |
lobe parts of cerebral cortex | 2.48e-08 | 2 |
hippocampal formation | 2.48e-08 | 2 |
limbic lobe | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.46e-16 | 1 |