FFCP PHASE1:Hg19::chr10:90750930..90750941,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:90750930..90750941,-
|short_description=p13@ACTA2
|description=CAGE_peak_13_at_ACTA2_5end
|association_with_transcript=103bp_to_ENST00000458159_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59 | |EntrezGene=59 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=130 | |HGNC=130 | ||
|TSSclassifier=strong | |||
|UniProt=F6UVQ4 | |UniProt=F6UVQ4 | ||
|association_with_transcript=103bp_to_ENST00000458159_5end | |||
|cluster_id=chr10:90750930..90750941,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_13_at_ACTA2_5end | |||
|id=chr10:90750930..90750941,- | |||
|ontology_enrichment_celltype=CL:0000055!5.92e-15!180;CL:0000680!9.18e-10!57;CL:0000056!9.18e-10!57;CL:0000355!9.18e-10!57;CL:0000187!2.48e-09!54;CL:0000183!3.30e-09!59;CL:0000393!4.05e-08!60;CL:0000211!4.05e-08!60;CL:0000057!2.55e-07!75;CL:0000192!9.82e-07!42;CL:0000514!9.82e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002591;1.04e-13;1!CL:0002595;7.50e-11;5!CL:0002583;1.70e-07;2!CL:0002593;1.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.10e-13,1;CL:0002595,9.62e-11,5;CL:0002583,1.45e-07,2;CL:0002593,2.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.50e-09!63;UBERON:0001015!1.50e-09!63;UBERON:0000383!1.50e-09!63;UBERON:0001134!2.06e-09!61;UBERON:0002036!2.06e-09!61;UBERON:0003082!2.06e-09!61;UBERON:0004290!6.56e-09!70;UBERON:0000914!7.58e-09!83;UBERON:0002329!7.58e-09!83;UBERON:0003077!7.58e-09!83;UBERON:0003059!7.58e-09!83;UBERON:0007282!7.58e-09!83;UBERON:0009618!7.58e-09!83;UBERON:0007285!7.58e-09!83;UBERON:0005256!1.56e-07!143;UBERON:0000486!2.49e-07!82;UBERON:0000490!8.89e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.85e-12;10!UBERON:0003834;7.50e-11;5!UBERON:0001533;7.50e-11;5!UBERON:0000478;1.01e-08;24!UBERON:0000178;2.85e-08;15!UBERON:0000179;2.85e-08;15!UBERON:0000463;2.85e-08;15!UBERON:0003513;5.28e-08;7!UBERON:0000078;1.70e-07;2!UBERON:0002012;1.70e-07;2!UBERON:0002456;1.70e-07;2!UBERON:0008886;1.70e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.85e-12,10;UBERON:0000358,3.85e-12,10;UBERON:0000307,3.85e-12,10;UBERON:0000091,3.85e-12,10;UBERON:0000087,3.85e-12,10;UBERON:0007010,3.85e-12,10;UBERON:0007806,3.85e-12,10;UBERON:0008780,3.85e-12,10;UBERON:0005728,3.85e-12,10;UBERON:0003834,9.62e-11,5;UBERON:0001533,9.62e-11,5;UBERON:0000478,1.11e-08,24;UBERON:0000178,2.85e-08,15;UBERON:0000179,2.85e-08,15;UBERON:0000463,2.85e-08,15;UBERON:0003513,6.29e-08,7;UBERON:0000078,1.75e-07,2;UBERON:0007497,1.75e-07,2;UBERON:0003643,1.75e-07,2;UBERON:0003504,1.75e-07,2;UBERON:0003469,1.75e-07,2;UBERON:0003496,1.75e-07,2;UBERON:0002012,1.75e-07,2;UBERON:0008886,1.75e-07,2;UBERON:0007303,1.75e-07,2;UBERON:0002061,1.75e-07,2;UBERON:0005432,1.75e-07,2;UBERON:0004363,1.75e-07,2;UBERON:0002456,2.12e-07,2 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0.331397375727916,0,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0,0.547497700291537,0.251085279189606,0.152826811495903,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0,0,0,0,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0.747243402759005,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0.125118519871964,0,0,0.612975591598039,0.150238058906597,0.340296549480063,0.358779271377724,0,0.211931901159562,0.300091096084402,0.618315175430633,0,0,0,0,0.252433774244115,0.0920498986422993,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.224262168690721,0,0,0,0,0,0.531876233169741,1.04007436911366,0.514414748524284,0,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0.306923946576125,0.561320188866147,0,0,0,0,0.616838775210622,1.59805552781814,0.328508624055237,0.519254429183621,0.581051892299796,0,0.200506470303285,0,0.114814448164607,0.546273504020151,0.524497659837696,0,0.0770153371044148,0.784349769176855,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.386682873168488,0,0.460511024178389,0.137836572484531,0.107420244868274,0.290033387828457,0.340906509664404,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0.308033580176089,1.06461206063404,0,0.18532421910392,0,0,0,0.38126038784765,0.511795582622668,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0.975267478179181,0.243713489631284,1.05650146756755,0,0.565621727814851,1.13008116620243,1.10273068709225,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0.329294892959902,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,1.35433422241283,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,3.26173241548684,8.40234784836219,9.08470960697462,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.337017719270924,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0.383830394638891,0,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0.285465333544967,0,0,0,0.895528817321244,0.934853239388898,2.21922344601045,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0.310874401165561,0,0.955780602982214,0,1.70789252563885,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0.219284049578707,0.176689145945881,0.964570191354574,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0.558644917973244,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0.879356221798103,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,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| ||
|short_description=p13@ACTA2 | |||
}} | }} |
Latest revision as of 20:47, 19 September 2015
Short description: | p13@ACTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ACTA2_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 103bp_to_ENST00000458159_5end |
EntrezGene: | ACTA2 |
HGNC: | 130 |
UniProt: | F6UVQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.10e-13 | 1 |
smooth muscle cell of the subclavian artery | 9.62e-11 | 5 |
subcutaneous preadipocyte | 1.45e-07 | 2 |
smooth muscle cell of the internal thoracic artery | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.85e-12 | 10 |
blastocyst | 3.85e-12 | 10 |
blastula | 3.85e-12 | 10 |
bilaminar disc | 3.85e-12 | 10 |
inner cell mass | 3.85e-12 | 10 |
cleaving embryo | 3.85e-12 | 10 |
connecting stalk | 3.85e-12 | 10 |
inner cell mass derived epiblast | 3.85e-12 | 10 |
extraembryonic mesoderm | 3.85e-12 | 10 |
thoracic segment blood vessel | 9.62e-11 | 5 |
subclavian artery | 9.62e-11 | 5 |
extraembryonic structure | 1.11e-08 | 24 |
blood | 2.85e-08 | 15 |
haemolymphatic fluid | 2.85e-08 | 15 |
organism substance | 2.85e-08 | 15 |
trunk blood vessel | 6.29e-08 | 7 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.75e-07 | 2 |
developing epithelial placode | 1.75e-07 | 2 |
respiratory system arterial blood vessel | 1.75e-07 | 2 |
respiratory system blood vessel | 1.75e-07 | 2 |
respiratory system artery | 1.75e-07 | 2 |
head blood vessel | 1.75e-07 | 2 |
pulmonary artery | 1.75e-07 | 2 |
pulmonary vascular system | 1.75e-07 | 2 |
pharyngeal vasculature | 1.75e-07 | 2 |
truncus arteriosus | 1.75e-07 | 2 |
aortic sac | 1.75e-07 | 2 |
pharyngeal arch artery | 1.75e-07 | 2 |
internal thoracic artery | 2.12e-07 | 2 |