FFCP PHASE1:Hg19::chr12:52444895..52444916,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52444895..52444916,- | |||
|coexpression_cluster_id=C1672 | |||
|description=CAGE_peak_at_chr12:52444895..52444916,- | |description=CAGE_peak_at_chr12:52444895..52444916,- | ||
|id=chr12:52444895..52444916,- | |id=chr12:52444895..52444916,- | ||
|ontology_enrichment_celltype=CL:0002057!5.72e-24!42;CL:0000860!6.34e-22!45;CL:0000557!3.89e-16!71;CL:0000766!4.78e-16!76;CL:0000738!5.50e-16!140;CL:0000839!1.70e-15!70;CL:0002031!1.33e-14!124;CL:0002009!3.24e-14!65;CL:0002194!4.23e-14!63;CL:0000576!4.23e-14!63;CL:0000040!4.23e-14!63;CL:0000559!4.23e-14!63;CL:0002087!7.05e-14!119;CL:0000037!4.22e-09!172;CL:0000566!4.22e-09!172;CL:0000988!2.01e-08!182;CL:0002393!6.55e-08!9;CL:0002397!6.55e-08!9;CL:0002032!1.59e-07!165;CL:0000837!1.59e-07!165;CL:0002320!5.06e-07!365 | |ontology_enrichment_celltype=CL:0002057!5.72e-24!42;CL:0000860!6.34e-22!45;CL:0000557!3.89e-16!71;CL:0000766!4.78e-16!76;CL:0000738!5.50e-16!140;CL:0000839!1.70e-15!70;CL:0002031!1.33e-14!124;CL:0002009!3.24e-14!65;CL:0002194!4.23e-14!63;CL:0000576!4.23e-14!63;CL:0000040!4.23e-14!63;CL:0000559!4.23e-14!63;CL:0002087!7.05e-14!119;CL:0000037!4.22e-09!172;CL:0000566!4.22e-09!172;CL:0000988!2.01e-08!182;CL:0002393!6.55e-08!9;CL:0002397!6.55e-08!9;CL:0002032!1.59e-07!165;CL:0000837!1.59e-07!165;CL:0002320!5.06e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.91e-24;33!CL:0002057;7.91e-24;33!CL:0000576;2.13e-19;48!CL:0000473;3.97e-16;39!CL:0000234;3.97e-16;39!CL:0000766;8.73e-15;69!CL:0002393;2.09e-09;6!CL:0002397;2.09e-09;6!CL:0002087;1.80e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.40e-37,42;CL:0002057,6.40e-37,42;CL:0000473,1.04e-30,48;CL:0000234,1.04e-30,48;CL:0000557,6.98e-26,67;CL:0000766,1.71e-25,72;CL:0000839,9.74e-25,66;CL:0002009,1.17e-22,61;CL:0002194,4.21e-22,59;CL:0000576,4.21e-22,59;CL:0000040,4.21e-22,59;CL:0000559,4.21e-22,59;CL:0000738,1.21e-19,136;CL:0002031,7.61e-18,120;CL:0002087,1.46e-16,115;CL:0002320,5.06e-15,361;CL:0000763,1.31e-13,108;CL:0000049,1.31e-13,108;CL:0002393,5.17e-13,9;CL:0002397,5.17e-13,9;CL:0000134,7.18e-13,354;CL:0000037,1.03e-12,168;CL:0000988,7.02e-12,177;CL:0002032,2.22e-11,161;CL:0000837,2.22e-11,161;CL:0000219,5.45e-10,386;CL:0000048,6.58e-10,427;CL:0000723,2.05e-09,433;CL:0000034,3.36e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.46e-26;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.36e-15!80;UBERON:0001474!1.02e-13!86;UBERON:0002390!1.86e-13!102;UBERON:0003061!1.86e-13!102;UBERON:0004765!9.19e-13!101;UBERON:0001434!9.19e-13!101;UBERON:0002193!1.04e-11!112;UBERON:0002405!1.28e-11!115;UBERON:0007023!8.19e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;9.94e-07;5!UBERON:0002216;9.94e-07;5!UBERON:0011134;9.94e-07;5!UBERON:0002209;9.94e-07;5!UBERON:0002213;9.94e-07;5!UBERON:0007844;9.94e-07;5!UBERON:0011138;9.94e-07;5!UBERON:0001130;9.94e-07;5!UBERON:0001066;9.94e-07;5!UBERON:0001468;9.94e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,6.87e-27,90;UBERON:0002371,2.24e-25,76;UBERON:0001474,6.00e-24,82;UBERON:0001434,7.34e-24,100;UBERON:0002390,1.29e-21,98;UBERON:0003061,1.29e-21,98;UBERON:0002405,3.68e-19,93;UBERON:0002193,3.17e-18,108;UBERON:0002384,2.07e-14,371;UBERON:0002204,2.01e-13,167;UBERON:0000926,2.50e-09,315;UBERON:0004120,2.50e-09,315;UBERON:0006603,2.50e-09,315;UBERON:0003081,2.67e-09,203;UBERON:0011135,5.52e-07,5;UBERON:0002216,5.52e-07,5;UBERON:0011134,5.52e-07,5;UBERON:0002209,5.52e-07,5;UBERON:0002213,5.52e-07,5;UBERON:0005856,5.52e-07,5;UBERON:0005866,5.52e-07,5;UBERON:0005863,5.52e-07,5;UBERON:0007844,5.52e-07,5;UBERON:0011138,5.52e-07,5;UBERON:0001130,5.52e-07,5;UBERON:0001066,5.52e-07,5;UBERON:0001468,5.52e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,3.7129905888014,5.30235801164665,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,1.53531759238885,2.32224184974114,0,0,0,0.0774672005803016,0,0.293600439334847,7.20194031091441,3.40925560699241,5.859293509328,0,0,0,0.436194716338694,0,1.21292030593908,3.25400651667958,9.04569353648017,8.05236564327269,4.31538588483226,2.0492856522328,8.74984250587765,18.2715210790408,16.7826017731795,27.0852973188684,3.20011977222428,2.45615535052061,6.06753408001728,13.1616073719488,9.62787081228281,24.2948107803636,0,0.398927315243264,0.426224750532694,1.16083695451434,1.13477044938228,5.60540024096017,3.76872997885115,1.5644487552606,6.5156653411535,0.605399502633369,1.84138817993782,5.37986058649504,2.95757400836718,8.2915676986367,7.96702852931828,4.26848798356681,1.50176892841506,1.12507910687956,5.98526761856622,3.77941686678271,2.19196984517561,0,0.546138611262131,1.77901850772711,1.28019066769952,1.60158394814405,4.59801951963587,3.30522436392431,0.954053754535364,6.26134266020393,3.52342313622563,6.11637165000366,0,1.68152568894461,0,0.393419540227666,0.393010762749165,1.43921049299656,0,0,0.473447805734733,0,0.334231370655521,0.294605907474837,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0,0.444859689486181,0,0,0.113309342697566,0,0,0,0,0.651083453856419,0,0.451725357233318,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,2.01210257911091,1.02290049474824,0,0,0.289693037921647,0,2.91980922181582,0,0,0,0.785874452986276,0,0,0,0,0,0.476981248610684,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,7.15009576391382,18.3575437279241,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,2.98897361103602,0,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.680593098960126,3.22901344239952,0,0,2.10063767259082,0,9.27505944164265,0,1.68776332241266,0.0974370051611986,4.03894038790583,0,0,4.9701342952326,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0.588664395376038,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,3.94130590316755,0.088048434013226,11.6103744702832,5.18831832301061,28.1520626540827,0,0,1.17217447210047,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,1.690605505112,0,0,0,0,0,6.14805372730035,0,0,0.65147236858747,6.39705507736582,0.791951872933429,0,0,0,0,0.502257091432126,0,0,0,2.85273810081437,0,0,0,0,0.591092280605782,1.50939302401662,1.79680250791648,0,0,0,0.335032530668698,1.27587750330633,1.49801404789436,0,0.414415513436035,1.96306386750624,1.50051156317903,2.98391526069709,0.415941723061614,0.178428988797162,0.157702415033935,0.585707074963566,0.300946099727719,0,0,0,0,0,0.195801157462741,0,1.44737618286021,3.66714141391649,1.38745825144478,0,0,0,0,3.37616341233737,0,0.128139149255701,0,0.160853921143607,4.45254199334973,1.07946785661859,2.30830242907065,2.54594183642808,0,4.76462551685833,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0.831076008928724,0,0,0,0.256450125116389,0,0,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,13.2221185668869,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3650530573057,0,0,0,1.14729081763241,0.392996164052485,0,0,0.844430541190656,3.62224382255892,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0.166849141711909,0,0,0,0,0,0,2.61996756571508,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0.445234820091624,0,0,2.19172787076177,1.93398740871803,0,0.20453736500431,0.123084805461069,0,0.359473404589307,0.179021174675609,0,0.394573622547734,0,0,0.969332746095218,0.463840490809256,0,0.260427761085233,0.699679999969566,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0.295547618953547,0.87754158861589,1.19832309870889,2.09135616417905,0.384751292518985,0.113942055847001,0,0,0,1.5950057986596,0,1.5991043280559,0,0.156980256395025,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,1.77912677208373,0.123563938946503,0.104421949505455,2.69604531922708,1.60515529459758,1.63985112007737,0,3.32629852184552,0,2.36750641709634,3.62972148145992,0,0.189559738885464,0,0,0,0,0,0,0,0,0,1.46988596121566,0.783532859223623,0.17472666824203,0,0.19351266257817,0,0,0.678923115418936,0,0.225980740780532,0,0,0,1.17330829640882,0,2.98834192635094,0.19980960958213,0,0,0.343189995723929,0.288109595976299,0.99402028452346,0.942776138467182,0,0,0,0,0,0,0,0.859530882839914,0.788662062837943,5.86493042671734,1.14580212005842,0.717873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.201550417460179,0.720599767084807,0,0.0787831823072236,0,0.0674035438541849,0.196854963029498,0,0,0.272406812223151,0,0,0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| ||
|short_description=p@chr12:52444895..52444916,- | |short_description=p@chr12:52444895..52444916,- | ||
}} | }} |
Latest revision as of 09:27, 24 July 2015
Short description: | p@chr12:52444895..52444916, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52444895..52444916, - |
Coexpression cluster: | C1672_seminal_CD14_Mast_CD34_immature_mesenchymal_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.40e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.40e-37 | 42 |
defensive cell | 1.04e-30 | 48 |
phagocyte | 1.04e-30 | 48 |
granulocyte monocyte progenitor cell | 6.98e-26 | 67 |
myeloid leukocyte | 1.71e-25 | 72 |
myeloid lineage restricted progenitor cell | 9.74e-25 | 66 |
macrophage dendritic cell progenitor | 1.17e-22 | 61 |
monopoietic cell | 4.21e-22 | 59 |
monocyte | 4.21e-22 | 59 |
monoblast | 4.21e-22 | 59 |
promonocyte | 4.21e-22 | 59 |
leukocyte | 1.21e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 7.61e-18 | 120 |
nongranular leukocyte | 1.46e-16 | 115 |
connective tissue cell | 5.06e-15 | 361 |
myeloid cell | 1.31e-13 | 108 |
common myeloid progenitor | 1.31e-13 | 108 |
intermediate monocyte | 5.17e-13 | 9 |
CD14-positive, CD16-positive monocyte | 5.17e-13 | 9 |
mesenchymal cell | 7.18e-13 | 354 |
hematopoietic stem cell | 1.03e-12 | 168 |
hematopoietic cell | 7.02e-12 | 177 |
hematopoietic oligopotent progenitor cell | 2.22e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.22e-11 | 161 |
motile cell | 5.45e-10 | 386 |
multi fate stem cell | 6.58e-10 | 427 |
somatic stem cell | 2.05e-09 | 433 |
stem cell | 3.36e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 6.87e-27 | 90 |
bone marrow | 2.24e-25 | 76 |
bone element | 6.00e-24 | 82 |
skeletal system | 7.34e-24 | 100 |
hematopoietic system | 1.29e-21 | 98 |
blood island | 1.29e-21 | 98 |
immune system | 3.68e-19 | 93 |
hemolymphoid system | 3.17e-18 | 108 |
connective tissue | 2.07e-14 | 371 |
musculoskeletal system | 2.01e-13 | 167 |
mesoderm | 2.50e-09 | 315 |
mesoderm-derived structure | 2.50e-09 | 315 |
presumptive mesoderm | 2.50e-09 | 315 |
lateral plate mesoderm | 2.67e-09 | 203 |
intervertebral cartilage | 5.52e-07 | 5 |
symphysis | 5.52e-07 | 5 |
nonsynovial joint | 5.52e-07 | 5 |
fibrous joint | 5.52e-07 | 5 |
cartilaginous joint | 5.52e-07 | 5 |
developing mesenchymal condensation | 5.52e-07 | 5 |
pre-cartilage condensation | 5.52e-07 | 5 |
cartilaginous condensation | 5.52e-07 | 5 |
cartilage element | 5.52e-07 | 5 |
post-cranial axial skeletal system | 5.52e-07 | 5 |
vertebral column | 5.52e-07 | 5 |
intervertebral disk | 5.52e-07 | 5 |
intervertebral joint | 5.52e-07 | 5 |