FFCP PHASE1:Hg19::chr12:52887143..52887158,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3853 | |EntrezGene=3853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6443 | |HGNC=6443 | ||
|TSSclassifier=strong | |||
|UniProt=P02538 | |UniProt=P02538 | ||
|association_with_transcript=22bp_to_NM_005554,uc001sam.2_5end | |association_with_transcript=22bp_to_NM_005554,uc001sam.2_5end | ||
|cluster_id=chr12:52887143..52887158,- | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_8_at_KRT6A_5end | |description=CAGE_peak_8_at_KRT6A_5end | ||
|id=chr12:52887143..52887158,- | |id=chr12:52887143..52887158,- | ||
|ontology_enrichment_celltype=CL:0002076!1.77e-28!43;CL:0002368!2.84e-24!13;CL:0000223!3.00e-19!59;CL:0000066!8.52e-19!254;CL:0002159!6.55e-16!13;CL:0000244!3.09e-14!4;CL:0000731!3.09e-14!4;CL:0002202!2.87e-13!9;CL:0002632!2.87e-13!9;CL:0002328!4.06e-11!3;CL:0000068!6.93e-11!3;CL:0000069!6.93e-11!3;CL:0000307!6.93e-11!3;CL:0000377!6.93e-11!3;CL:0002251!1.10e-10!21;CL:0000240!1.09e-09!6;CL:0000311!1.09e-09!6;CL:0000079!1.09e-09!6;CL:0000237!1.09e-09!6;CL:0000036!1.09e-09!6;CL:0000357!1.09e-09!6;CL:0000114!1.09e-09!6;CL:0002077!1.53e-08!33;CL:0000575!3.43e-08!2;CL:0000076!3.59e-08!62;CL:0002327!7.73e-08!4;CL:0002536!2.71e-07!2;CL:0000362!4.39e-07!8;CL:0000312!7.20e-07!5 | |ontology_enrichment_celltype=CL:0002076!1.77e-28!43;CL:0002368!2.84e-24!13;CL:0000223!3.00e-19!59;CL:0000066!8.52e-19!254;CL:0002159!6.55e-16!13;CL:0000244!3.09e-14!4;CL:0000731!3.09e-14!4;CL:0002202!2.87e-13!9;CL:0002632!2.87e-13!9;CL:0002328!4.06e-11!3;CL:0000068!6.93e-11!3;CL:0000069!6.93e-11!3;CL:0000307!6.93e-11!3;CL:0000377!6.93e-11!3;CL:0002251!1.10e-10!21;CL:0000240!1.09e-09!6;CL:0000311!1.09e-09!6;CL:0000079!1.09e-09!6;CL:0000237!1.09e-09!6;CL:0000036!1.09e-09!6;CL:0000357!1.09e-09!6;CL:0000114!1.09e-09!6;CL:0002077!1.53e-08!33;CL:0000575!3.43e-08!2;CL:0000076!3.59e-08!62;CL:0002327!7.73e-08!4;CL:0002536!2.71e-07!2;CL:0000362!4.39e-07!8;CL:0000312!7.20e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.50e-30;13!CL:0002159;1.96e-28;14!CL:0002202;3.89e-25;9!CL:0002632;3.89e-25;9!CL:0002328;5.89e-20;3!CL:0000307;9.57e-20;3!CL:0000240;7.10e-18;6!CL:0000311;7.10e-18;6!CL:0000079;7.10e-18;6!CL:0000237;7.10e-18;6!CL:0002076;7.58e-18;42!CL:0000244;2.33e-15;4!CL:0000731;2.33e-15;4!CL:0002077;7.96e-15;34!CL:0000575;2.08e-14;2!CL:0000312;2.14e-12;5!CL:0000362;9.70e-12;9!CL:0002231;1.11e-09;3!CL:0002166;2.51e-09;3!CL:0002252;2.79e-08;1!CL:0002336;3.67e-08;1!CL:0002261;3.67e-08;1!CL:0002170;3.67e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.94e-30,13;CL:0002159,1.89e-28,14;CL:0002202,4.16e-25,9;CL:0002632,4.16e-25,9;CL:0002076,2.37e-23,42;CL:0002328,4.70e-20,3;CL:0000068,1.32e-19,3;CL:0000069,1.32e-19,3;CL:0000307,1.32e-19,3;CL:0000377,1.32e-19,3;CL:0000240,6.96e-18,6;CL:0000311,6.96e-18,6;CL:0000079,6.96e-18,6;CL:0000237,6.96e-18,6;CL:0000036,6.96e-18,6;CL:0000357,6.96e-18,6;CL:0000114,6.96e-18,6;CL:0002077,2.29e-17,34;CL:0000223,3.20e-16,58;CL:0000244,1.66e-15,4;CL:0000731,1.66e-15,4;CL:0000066,3.89e-15,253;CL:0000575,2.16e-14,2;CL:0000312,2.23e-12,5;CL:0000362,1.10e-11,9;CL:0002231,1.57e-09,3;CL:0002166,1.94e-09,3;CL:0002321,4.72e-09,250;CL:0000221,1.16e-08,72;CL:0002252,2.70e-08,1;CL:0002336,3.32e-08,1;CL:0002261,3.32e-08,1;CL:0002170,3.32e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000377;9.57e-20;3!CL:0000357;7.10e-18;6!CL:0000114;7.10e-18;6!CL:0000223;2.12e-10;58 | |||
|ontology_enrichment_disease=DOID:1749!1.90e-12!14 | |ontology_enrichment_disease=DOID:1749!1.90e-12!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.21e-17!14;UBERON:0000158!4.21e-17!14;UBERON:0001004!7.20e-16!72;UBERON:0004119!1.36e-13!169;UBERON:0000925!1.36e-13!169;UBERON:0006595!1.36e-13!169;UBERON:0000166!8.52e-13!21;UBERON:0000365!2.17e-11!5;UBERON:0000165!2.69e-11!28;UBERON:0000930!2.69e-11!28;UBERON:0003124!3.38e-11!7;UBERON:0004815!4.06e-11!3;UBERON:0002031!4.06e-11!3;UBERON:0007196!6.94e-11!14;UBERON:0001558!6.94e-11!14;UBERON:0000161!2.39e-10!35;UBERON:0000065!2.43e-10!53;UBERON:0003729!3.63e-10!5;UBERON:0005910!1.73e-09!6;UBERON:0000478!2.87e-09!24;UBERON:0004923!6.07e-09!57;UBERON:0000344!1.09e-08!12;UBERON:0002185!1.98e-08!4;UBERON:0001444!2.32e-08!48;UBERON:0001987!6.38e-08!4;UBERON:0004340!6.38e-08!4;UBERON:0001911!7.73e-08!4;UBERON:0005333!7.73e-08!4;UBERON:0008425!7.73e-08!4;UBERON:0005311!7.73e-08!4;UBERON:0003102!9.80e-08!95;UBERON:0000305!1.00e-07!7;UBERON:0003126!1.04e-07!7;UBERON:0001005!1.04e-07!7;UBERON:0003343!3.74e-07!4;UBERON:0004785!3.74e-07!4;UBERON:0000064!4.91e-07!219;UBERON:0003100!5.21e-07!41;UBERON:0004871!9.30e-07!8 | |ontology_enrichment_uberon=UBERON:0005631!4.21e-17!14;UBERON:0000158!4.21e-17!14;UBERON:0001004!7.20e-16!72;UBERON:0004119!1.36e-13!169;UBERON:0000925!1.36e-13!169;UBERON:0006595!1.36e-13!169;UBERON:0000166!8.52e-13!21;UBERON:0000365!2.17e-11!5;UBERON:0000165!2.69e-11!28;UBERON:0000930!2.69e-11!28;UBERON:0003124!3.38e-11!7;UBERON:0004815!4.06e-11!3;UBERON:0002031!4.06e-11!3;UBERON:0007196!6.94e-11!14;UBERON:0001558!6.94e-11!14;UBERON:0000161!2.39e-10!35;UBERON:0000065!2.43e-10!53;UBERON:0003729!3.63e-10!5;UBERON:0005910!1.73e-09!6;UBERON:0000478!2.87e-09!24;UBERON:0004923!6.07e-09!57;UBERON:0000344!1.09e-08!12;UBERON:0002185!1.98e-08!4;UBERON:0001444!2.32e-08!48;UBERON:0001987!6.38e-08!4;UBERON:0004340!6.38e-08!4;UBERON:0001911!7.73e-08!4;UBERON:0005333!7.73e-08!4;UBERON:0008425!7.73e-08!4;UBERON:0005311!7.73e-08!4;UBERON:0003102!9.80e-08!95;UBERON:0000305!1.00e-07!7;UBERON:0003126!1.04e-07!7;UBERON:0001005!1.04e-07!7;UBERON:0003343!3.74e-07!4;UBERON:0004785!3.74e-07!4;UBERON:0000064!4.91e-07!219;UBERON:0003100!5.21e-07!41;UBERON:0004871!9.30e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;5.89e-20;3!UBERON:0002031;5.89e-20;3!UBERON:0007196;6.72e-15;15!UBERON:0001558;6.72e-15;15!UBERON:0000365;2.14e-12;5!UBERON:0002185;3.35e-12;5!UBERON:0005910;2.06e-10;6!UBERON:0000485;7.41e-09;7!UBERON:0000486;7.76e-09;12!UBERON:0003126;9.07e-09;7!UBERON:0001005;9.07e-09;7!UBERON:0005178;1.49e-08;34!UBERON:0002224;1.49e-08;34!UBERON:0005181;8.01e-08;35!UBERON:0000964;1.25e-07;4!UBERON:0010409;1.25e-07;4!UBERON:0001708;3.33e-07;4!UBERON:0008895;3.33e-07;4!UBERON:0005911;3.66e-07;36!UBERON:0001003;4.35e-07;15!UBERON:0007376;4.35e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.70e-20,3;UBERON:0002031,4.70e-20,3;UBERON:0007196,6.99e-15,15;UBERON:0001558,6.99e-15,15;UBERON:0000365,1.64e-12,5;UBERON:0002185,2.93e-12,5;UBERON:0005910,1.64e-10,6;UBERON:0004119,2.09e-09,160;UBERON:0000925,2.09e-09,160;UBERON:0006595,2.09e-09,160;UBERON:0003126,1.04e-08,7;UBERON:0001005,1.04e-08,7;UBERON:0003102,1.62e-08,99;UBERON:0005178,1.67e-08,34;UBERON:0002224,1.67e-08,34;UBERON:0005181,3.10e-08,35;UBERON:0000065,3.65e-08,54;UBERON:0005157,9.61e-08,47;UBERON:0000964,1.27e-07,4;UBERON:0010409,1.27e-07,4;UBERON:0004348,1.27e-07,4;UBERON:0005427,1.27e-07,4;UBERON:0001708,2.75e-07,4;UBERON:0008895,2.75e-07,4;UBERON:0001003,4.68e-07,15;UBERON:0007376,4.68e-07,15;UBERON:0007383,4.68e-07,15;UBERON:0000485,5.11e-07,9;UBERON:0001004,6.53e-07,74 | |||
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| ||
|short_description=p8@KRT6A | |short_description=p8@KRT6A | ||
}} | }} |
Latest revision as of 22:55, 18 September 2015
Short description: | p8@KRT6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KRT6A_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 22bp_to_NM_005554, uc001sam.2_5end |
EntrezGene: | KRT6A |
HGNC: | 6443 |
UniProt: | P02538 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.70e-20 | 3 |
epithelium of bronchus | 4.70e-20 | 3 |
tracheobronchial tree | 6.99e-15 | 15 |
lower respiratory tract | 6.99e-15 | 15 |
urothelium | 1.64e-12 | 5 |
bronchus | 2.93e-12 | 5 |
transitional epithelium | 1.64e-10 | 6 |
endoderm-derived structure | 2.09e-09 | 160 |
endoderm | 2.09e-09 | 160 |
presumptive endoderm | 2.09e-09 | 160 |
trachea | 1.04e-08 | 7 |
respiratory airway | 1.04e-08 | 7 |
surface structure | 1.62e-08 | 99 |
thoracic cavity element | 1.67e-08 | 34 |
thoracic cavity | 1.67e-08 | 34 |
thoracic segment organ | 3.10e-08 | 35 |
respiratory tract | 3.65e-08 | 54 |
epithelial fold | 9.61e-08 | 47 |
cornea | 1.27e-07 | 4 |
eye surface | 1.27e-07 | 4 |
optic eminence | 1.27e-07 | 4 |
corneal primordium | 1.27e-07 | 4 |
jaw skeleton | 2.75e-07 | 4 |
splanchnocranium | 2.75e-07 | 4 |
skin epidermis | 4.68e-07 | 15 |
outer epithelium | 4.68e-07 | 15 |
enveloping layer of ectoderm | 4.68e-07 | 15 |
simple columnar epithelium | 5.11e-07 | 9 |
respiratory system | 6.53e-07 | 74 |