FFCP PHASE1:Hg19::chr12:6248302..6248322,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:6248302..6248322,+ | |||
|coexpression_cluster_id=C1163 | |||
|description=CAGE_peak_at_chr12:6248302..6248322,+ | |description=CAGE_peak_at_chr12:6248302..6248322,+ | ||
|id=chr12:6248302..6248322,+ | |id=chr12:6248302..6248322,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.46e-81!42;CL:0000766!2.10e-77!76;CL:0000860!4.54e-75!45;CL:0002194!4.50e-60!63;CL:0000576!4.50e-60!63;CL:0000040!4.50e-60!63;CL:0000559!4.50e-60!63;CL:0000839!2.58e-58!70;CL:0002009!7.63e-58!65;CL:0000557!2.60e-57!71;CL:0000738!1.02e-52!140;CL:0000763!1.44e-49!112;CL:0000049!1.44e-49!112;CL:0000037!1.08e-42!172;CL:0000566!1.08e-42!172;CL:0002087!1.78e-40!119;CL:0000988!2.21e-39!182;CL:0002032!5.57e-37!165;CL:0000837!5.57e-37!165;CL:0002031!2.50e-36!124;CL:0002393!1.30e-21!9;CL:0002397!1.30e-21!9;CL:0000094!9.30e-20!8;CL:0000081!7.01e-14!11;CL:0000134!6.20e-13!358;CL:0002320!2.31e-12!365;CL:0000219!6.14e-11!390;CL:0000775!1.34e-08!3;CL:0000034!2.68e-08!444;CL:0000767!3.42e-08!3;CL:0000875!4.97e-08!3;CL:0002396!4.97e-08!3;CL:0000048!5.07e-08!430;CL:0000842!8.09e-08!3;CL:0000723!1.08e-07!436 | |ontology_enrichment_celltype=CL:0002057!2.46e-81!42;CL:0000766!2.10e-77!76;CL:0000860!4.54e-75!45;CL:0002194!4.50e-60!63;CL:0000576!4.50e-60!63;CL:0000040!4.50e-60!63;CL:0000559!4.50e-60!63;CL:0000839!2.58e-58!70;CL:0002009!7.63e-58!65;CL:0000557!2.60e-57!71;CL:0000738!1.02e-52!140;CL:0000763!1.44e-49!112;CL:0000049!1.44e-49!112;CL:0000037!1.08e-42!172;CL:0000566!1.08e-42!172;CL:0002087!1.78e-40!119;CL:0000988!2.21e-39!182;CL:0002032!5.57e-37!165;CL:0000837!5.57e-37!165;CL:0002031!2.50e-36!124;CL:0002393!1.30e-21!9;CL:0002397!1.30e-21!9;CL:0000094!9.30e-20!8;CL:0000081!7.01e-14!11;CL:0000134!6.20e-13!358;CL:0002320!2.31e-12!365;CL:0000219!6.14e-11!390;CL:0000775!1.34e-08!3;CL:0000034!2.68e-08!444;CL:0000767!3.42e-08!3;CL:0000875!4.97e-08!3;CL:0002396!4.97e-08!3;CL:0000048!5.07e-08!430;CL:0000842!8.09e-08!3;CL:0000723!1.08e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.63e-65;33!CL:0002057;6.63e-65;33!CL:0000576;3.31e-59;48!CL:0000766;2.21e-48;69!CL:0000473;2.57e-45;39!CL:0000234;2.57e-45;39!CL:0000094;2.86e-31;8!CL:0002393;5.92e-24;6!CL:0002397;5.92e-24;6!CL:0000081;2.36e-22;11!CL:0000763;4.35e-20;100!CL:0002087;8.88e-17;104!CL:0000738;4.58e-13;136!CL:0000775;5.03e-13;3!CL:0000767;2.25e-12;3!CL:0000875;3.63e-12;3!CL:0002396;3.63e-12;3!CL:0000226;9.32e-12;3!CL:0000842;9.32e-12;3!CL:0000771;2.31e-09;2!CL:0000988;5.72e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.47e-103,42;CL:0002057,5.47e-103,42;CL:0000766,1.82e-101,72;CL:0000473,4.80e-89,48;CL:0000234,4.80e-89,48;CL:0002194,1.25e-73,59;CL:0000576,1.25e-73,59;CL:0000040,1.25e-73,59;CL:0000559,1.25e-73,59;CL:0000839,9.49e-73,66;CL:0000557,1.51e-71,67;CL:0002009,5.68e-71,61;CL:0000763,1.17e-64,108;CL:0000049,1.17e-64,108;CL:0000738,2.27e-62,136;CL:0000037,1.34e-48,168;CL:0000988,1.28e-45,177;CL:0002087,4.67e-43,115;CL:0002032,3.04e-42,161;CL:0000837,3.04e-42,161;CL:0002031,2.04e-38,120;CL:0002393,2.51e-34,9;CL:0002397,2.51e-34,9;CL:0000094,2.76e-31,8;CL:0000081,2.30e-22,11;CL:0000134,1.29e-17,354;CL:0002320,4.53e-17,361;CL:0000219,3.84e-15,386;CL:0000034,1.03e-13,441;CL:0000775,4.83e-13,3;CL:0000048,8.80e-13,427;CL:0000723,1.86e-12,433;CL:0000767,2.21e-12,3;CL:0000875,4.07e-12,3;CL:0002396,4.07e-12,3;CL:0000226,8.98e-12,3;CL:0000842,8.98e-12,3;CL:0000771,2.36e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.88e-72;42!CL:0000049;2.92e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.92e-56!102;UBERON:0003061!1.92e-56!102;UBERON:0002371!9.94e-52!80;UBERON:0002193!5.00e-50!112;UBERON:0001474!3.43e-47!86;UBERON:0004765!3.37e-38!101;UBERON:0001434!3.37e-38!101;UBERON:0002405!1.16e-36!115;UBERON:0003081!1.63e-20!216;UBERON:0002204!6.23e-18!167;UBERON:0002384!1.38e-11!375 | |ontology_enrichment_uberon=UBERON:0002390!1.92e-56!102;UBERON:0003061!1.92e-56!102;UBERON:0002371!9.94e-52!80;UBERON:0002193!5.00e-50!112;UBERON:0001474!3.43e-47!86;UBERON:0004765!3.37e-38!101;UBERON:0001434!3.37e-38!101;UBERON:0002405!1.16e-36!115;UBERON:0003081!1.63e-20!216;UBERON:0002204!6.23e-18!167;UBERON:0002384!1.38e-11!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.98e-62,76;UBERON:0002390,7.55e-58,98;UBERON:0003061,7.55e-58,98;UBERON:0001474,5.55e-57,82;UBERON:0002193,1.16e-51,108;UBERON:0004765,3.54e-51,90;UBERON:0002405,2.96e-49,93;UBERON:0001434,3.25e-45,100;UBERON:0002204,1.39e-23,167;UBERON:0003081,3.98e-23,203;UBERON:0002384,2.53e-16,371;UBERON:0000926,1.50e-11,315;UBERON:0004120,1.50e-11,315;UBERON:0006603,1.50e-11,315 | |||
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| ||
|short_description=p@chr12:6248302..6248322,+ | |short_description=p@chr12:6248302..6248322,+ | ||
}} | }} |
Latest revision as of 11:05, 24 July 2015
Short description: | p@chr12:6248302..6248322, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6248302..6248322, + |
Coexpression cluster: | C1163_Eosinophils_Neutrophils_CD14_Basophils_CD14CD16_Peripheral_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.98e-62 | 76 |
hematopoietic system | 7.55e-58 | 98 |
blood island | 7.55e-58 | 98 |
bone element | 5.55e-57 | 82 |
hemolymphoid system | 1.16e-51 | 108 |
skeletal element | 3.54e-51 | 90 |
immune system | 2.96e-49 | 93 |
skeletal system | 3.25e-45 | 100 |
musculoskeletal system | 1.39e-23 | 167 |
lateral plate mesoderm | 3.98e-23 | 203 |
connective tissue | 2.53e-16 | 371 |
mesoderm | 1.50e-11 | 315 |
mesoderm-derived structure | 1.50e-11 | 315 |
presumptive mesoderm | 1.50e-11 | 315 |