FFCP PHASE1:Hg19::chr12:85673868..85673881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8092 | |EntrezGene=8092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1494 | |HGNC=1494 | ||
|TSSclassifier=strong | |||
|UniProt=Q15699 | |UniProt=Q15699 | ||
|association_with_transcript=-3bp_to_ENST00000316824_5end | |association_with_transcript=-3bp_to_ENST00000316824_5end | ||
|cluster_id=chr12:85673868..85673881,+ | |||
|coexpression_cluster_id=C3339 | |||
|description=CAGE_peak_2_at_ALX1_5end | |description=CAGE_peak_2_at_ALX1_5end | ||
|id=chr12:85673868..85673881,+ | |id=chr12:85673868..85673881,+ | ||
|ontology_enrichment_celltype=CL:0000148!6.36e-16!10;CL:0000541!6.36e-16!10;CL:0000710!8.76e-15!20;CL:0000333!3.01e-14!41;CL:0000133!4.89e-13!59;CL:0000147!9.52e-11!14;CL:0000075!4.95e-10!27;CL:0000221!8.88e-10!71;CL:0002150!1.07e-07!3;CL:0000861!1.07e-07!3;CL:0002077!1.33e-07!33;CL:0002567!3.07e-07!3 | |ontology_enrichment_celltype=CL:0000148!6.36e-16!10;CL:0000541!6.36e-16!10;CL:0000710!8.76e-15!20;CL:0000333!3.01e-14!41;CL:0000133!4.89e-13!59;CL:0000147!9.52e-11!14;CL:0000075!4.95e-10!27;CL:0000221!8.88e-10!71;CL:0002150!1.07e-07!3;CL:0000861!1.07e-07!3;CL:0002077!1.33e-07!33;CL:0002567!3.07e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.69e-26;10!CL:0000710;1.65e-25;20!CL:0000075;2.00e-18;27!CL:0000147;2.94e-18;14!CL:0002567;6.72e-17;3!CL:0002077;1.70e-12;34!CL:0002367;1.10e-11;2!CL:0000197;7.81e-09;6!CL:0000098;7.81e-09;6!CL:0002167;7.81e-09;6!CL:0002550;5.11e-07;1!CL:0002566;6.99e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.76e-26,10;CL:0000541,5.76e-26,10;CL:0000710,1.55e-25,20;CL:0000075,1.91e-18,27;CL:0000147,2.64e-18,14;CL:0002567,6.37e-17,3;CL:0002077,2.84e-14,34;CL:0002367,1.01e-11,2;CL:0000133,1.64e-10,59;CL:0000197,8.13e-09,6;CL:0000098,8.13e-09,6;CL:0002167,8.13e-09,6;CL:0000333,8.51e-09,41;CL:0000221,2.94e-08,72;CL:0002550,4.97e-07,1;CL:0002566,6.60e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;3.13e-07;1!UBERON:0003852;3.13e-07;1 | |||
|ontology_enrichment_disease=DOID:3095!4.70e-10!22;DOID:2994!4.70e-10!22 | |ontology_enrichment_disease=DOID:3095!4.70e-10!22;DOID:2994!4.70e-10!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!8.51e-08!11;UBERON:0006876!8.51e-08!11;UBERON:0000010!8.45e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;1.10e-11;2!UBERON:0003956;1.10e-11;2!UBERON:0005705;3.13e-07;1!UBERON:0008193;3.13e-07;1!UBERON:0010912;3.13e-07;1!UBERON:0002514;3.13e-07;1!UBERON:0003457;3.13e-07;1!UBERON:0008907;3.13e-07;1!UBERON:0008001;3.13e-07;1!UBERON:0007213;3.13e-07;1!UBERON:0009891;3.13e-07;1!UBERON:0007914;3.13e-07;1!UBERON:0007375;3.13e-07;1!UBERON:0003323;3.13e-07;1!UBERON:0010258;3.13e-07;1!UBERON:0005253;3.13e-07;1!UBERON:0007842;3.13e-07;1!UBERON:0002397;3.13e-07;1!UBERON:0003113;3.13e-07;1!UBERON:0003277;3.13e-07;1!UBERON:0001709;3.13e-07;1!UBERON:0002244;3.13e-07;1!UBERON:0005620;3.13e-07;1!UBERON:0010364;3.13e-07;1!UBERON:0004288;3.13e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,1.01e-11,2;UBERON:0003956,1.01e-11,2;UBERON:0005705,3.13e-07,1;UBERON:0008193,3.13e-07,1;UBERON:0010912,3.13e-07,1;UBERON:0002514,3.13e-07,1;UBERON:0003457,3.13e-07,1;UBERON:0008907,3.13e-07,1;UBERON:0008001,3.13e-07,1;UBERON:0007213,3.13e-07,1;UBERON:0009891,3.13e-07,1;UBERON:0007914,3.13e-07,1;UBERON:0009292,3.13e-07,1;UBERON:0003099,3.13e-07,1;UBERON:0007375,3.13e-07,1;UBERON:0003323,3.13e-07,1;UBERON:0010258,3.13e-07,1;UBERON:0007842,3.13e-07,1;UBERON:0009494,3.13e-07,1;UBERON:0010042,3.13e-07,1;UBERON:0010045,3.13e-07,1;UBERON:0010259,3.13e-07,1;UBERON:0010359,3.13e-07,1;UBERON:0009526,3.13e-07,1;UBERON:0002397,3.13e-07,1;UBERON:0003113,3.13e-07,1;UBERON:0003277,3.13e-07,1;UBERON:0001709,3.13e-07,1;UBERON:0004066,3.13e-07,1;UBERON:0002244,3.13e-07,1;UBERON:0005620,3.13e-07,1;UBERON:0004362,3.13e-07,1;UBERON:0010364,3.13e-07,1;UBERON:0010046,3.13e-07,1;UBERON:0005868,3.13e-07,1;UBERON:0007238,3.13e-07,1;UBERON:0004288,3.13e-07,1;UBERON:0004068,3.13e-07,1;UBERON:0010334,3.13e-07,1;UBERON:0003852,3.13e-07,1;UBERON:0010253,3.13e-07,1 | |||
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| ||
|short_description=p2@ALX1 | |short_description=p2@ALX1 | ||
}} | }} |
Latest revision as of 03:55, 25 September 2015
Short description: | p2@ALX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ALX1_5end |
Coexpression cluster: | C3339_small_normal_epitheloid_neuroblastoma_neuroectodermal_kidney_Olfactory |
Association with transcript: | -3bp_to_ENST00000316824_5end |
EntrezGene: | ALX1 |
HGNC: | 1494 |
UniProt: | Q15699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.76e-26 | 10 |
melanoblast | 5.76e-26 | 10 |
neurecto-epithelial cell | 1.55e-25 | 20 |
columnar/cuboidal epithelial cell | 1.91e-18 | 27 |
pigment cell | 2.64e-18 | 14 |
light melanocyte | 6.37e-17 | 3 |
ecto-epithelial cell | 2.84e-14 | 34 |
trabecular meshwork cell | 1.01e-11 | 2 |
neurectodermal cell | 1.64e-10 | 59 |
receptor cell | 8.13e-09 | 6 |
sensory epithelial cell | 8.13e-09 | 6 |
olfactory epithelial cell | 8.13e-09 | 6 |
migratory neural crest cell | 8.51e-09 | 41 |
ectodermal cell | 2.94e-08 | 72 |
fibroblast of the conjuctiva | 4.97e-07 | 1 |
dark melanocyte | 6.60e-07 | 1 |