FFCP PHASE1:Hg19::chr13:114554812..114554842,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:114554812..114554842,- | |||
|coexpression_cluster_id=C2252 | |||
|description=CAGE_peak_at_chr13:114554812..114554842,- | |description=CAGE_peak_at_chr13:114554812..114554842,- | ||
|id=chr13:114554812..114554842,- | |id=chr13:114554812..114554842,- | ||
|ontology_enrichment_celltype=CL:0000057!1.24e-10!75;CL:0002620!9.56e-08!23 | |ontology_enrichment_celltype=CL:0000057!1.24e-10!75;CL:0002620!9.56e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.72e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.10e-14,76;CL:0002620,6.65e-09,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;2.55e-07;5!DOID:450;2.55e-07;5!DOID:66;2.55e-07;5!DOID:423;2.55e-07;5!DOID:0080000;2.55e-07;5!DOID:11722;2.55e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.68e-07,5;DOID:450,2.68e-07,5;DOID:66,2.68e-07,5;DOID:423,2.68e-07,5;DOID:0080000,2.68e-07,5;DOID:11722,2.68e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.47e-12!365;UBERON:0001049!3.22e-12!57;UBERON:0005068!3.22e-12!57;UBERON:0006241!3.22e-12!57;UBERON:0007135!3.22e-12!57;UBERON:0000033!4.73e-12!123;UBERON:0003102!1.18e-11!95;UBERON:0000153!1.87e-11!129;UBERON:0007811!1.87e-11!129;UBERON:0004121!2.25e-11!169;UBERON:0000062!2.89e-11!511;UBERON:0002020!4.94e-11!34;UBERON:0003528!4.94e-11!34;UBERON:0007023!1.15e-10!115;UBERON:0002780!1.60e-10!41;UBERON:0001890!1.60e-10!41;UBERON:0006240!1.60e-10!41;UBERON:0000924!1.92e-10!173;UBERON:0006601!1.92e-10!173;UBERON:0001893!2.28e-10!34;UBERON:0002791!2.28e-10!33;UBERON:0003075!2.98e-10!86;UBERON:0007284!2.98e-10!86;UBERON:0002616!4.27e-10!59;UBERON:0000468!4.75e-10!659;UBERON:0003080!6.79e-10!42;UBERON:0001869!9.43e-10!32;UBERON:0002346!5.48e-09!90;UBERON:0000955!6.71e-09!69;UBERON:0006238!6.71e-09!69;UBERON:0000480!1.98e-08!626;UBERON:0000467!2.60e-08!625;UBERON:0001017!2.65e-08!82;UBERON:0000073!4.59e-08!94;UBERON:0001016!4.59e-08!94;UBERON:0005743!4.95e-08!86;UBERON:0000956!5.59e-08!25;UBERON:0000203!5.59e-08!25;UBERON:0003056!2.17e-07!61;UBERON:0002619!3.64e-07!22;UBERON:0003101!5.55e-07!22;UBERON:0000079!5.55e-07!22 | |ontology_enrichment_uberon=UBERON:0000475!2.47e-12!365;UBERON:0001049!3.22e-12!57;UBERON:0005068!3.22e-12!57;UBERON:0006241!3.22e-12!57;UBERON:0007135!3.22e-12!57;UBERON:0000033!4.73e-12!123;UBERON:0003102!1.18e-11!95;UBERON:0000153!1.87e-11!129;UBERON:0007811!1.87e-11!129;UBERON:0004121!2.25e-11!169;UBERON:0000062!2.89e-11!511;UBERON:0002020!4.94e-11!34;UBERON:0003528!4.94e-11!34;UBERON:0007023!1.15e-10!115;UBERON:0002780!1.60e-10!41;UBERON:0001890!1.60e-10!41;UBERON:0006240!1.60e-10!41;UBERON:0000924!1.92e-10!173;UBERON:0006601!1.92e-10!173;UBERON:0001893!2.28e-10!34;UBERON:0002791!2.28e-10!33;UBERON:0003075!2.98e-10!86;UBERON:0007284!2.98e-10!86;UBERON:0002616!4.27e-10!59;UBERON:0000468!4.75e-10!659;UBERON:0003080!6.79e-10!42;UBERON:0001869!9.43e-10!32;UBERON:0002346!5.48e-09!90;UBERON:0000955!6.71e-09!69;UBERON:0006238!6.71e-09!69;UBERON:0000480!1.98e-08!626;UBERON:0000467!2.60e-08!625;UBERON:0001017!2.65e-08!82;UBERON:0000073!4.59e-08!94;UBERON:0001016!4.59e-08!94;UBERON:0005743!4.95e-08!86;UBERON:0000956!5.59e-08!25;UBERON:0000203!5.59e-08!25;UBERON:0003056!2.17e-07!61;UBERON:0002619!3.64e-07!22;UBERON:0003101!5.55e-07!22;UBERON:0000079!5.55e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.56e-09;34!UBERON:0002020;6.56e-09;34!UBERON:0002791;1.98e-08;32!UBERON:0001869;2.68e-07;32!UBERON:0001893;3.33e-07;34!UBERON:0000956;3.58e-07;25!UBERON:0000203;3.58e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.05e-10,34;UBERON:0002020,5.05e-10,34;UBERON:0001049,7.30e-10,56;UBERON:0005068,7.30e-10,56;UBERON:0006241,7.30e-10,56;UBERON:0007135,7.30e-10,56;UBERON:0003102,3.52e-09,99;UBERON:0002791,5.36e-09,32;UBERON:0000073,1.97e-08,53;UBERON:0002616,1.97e-08,53;UBERON:0001893,4.01e-08,34;UBERON:0001869,7.69e-08,32;UBERON:0002780,1.95e-07,41;UBERON:0001890,1.95e-07,41;UBERON:0003080,1.95e-07,41;UBERON:0006240,1.95e-07,41;UBERON:0000956,5.93e-07,25;UBERON:0000203,5.93e-07,25;UBERON:0002199,8.14e-07,46;UBERON:0002416,8.14e-07,46;UBERON:0002097,8.34e-07,41 | |||
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| ||
|short_description=p@chr13:114554812..114554842,- | |short_description=p@chr13:114554812..114554842,- | ||
}} | }} |
Latest revision as of 14:50, 24 July 2015
Short description: | p@chr13:114554812..114554842, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114554812..114554842, - |
Coexpression cluster: | C2252_Preadipocyte_Fibroblast_Small_mesenchymal_Smooth_mesothelioma_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.10e-14 | 76 |
skin fibroblast | 6.65e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 5.05e-10 | 34 |
gray matter | 5.05e-10 | 34 |
neural tube | 7.30e-10 | 56 |
neural rod | 7.30e-10 | 56 |
future spinal cord | 7.30e-10 | 56 |
neural keel | 7.30e-10 | 56 |
surface structure | 3.52e-09 | 99 |
regional part of telencephalon | 5.36e-09 | 32 |
regional part of nervous system | 1.97e-08 | 53 |
regional part of brain | 1.97e-08 | 53 |
telencephalon | 4.01e-08 | 34 |
cerebral hemisphere | 7.69e-08 | 32 |
regional part of forebrain | 1.95e-07 | 41 |
forebrain | 1.95e-07 | 41 |
anterior neural tube | 1.95e-07 | 41 |
future forebrain | 1.95e-07 | 41 |
cerebral cortex | 5.93e-07 | 25 |
pallium | 5.93e-07 | 25 |
integument | 8.14e-07 | 46 |
integumental system | 8.14e-07 | 46 |
skin of body | 8.34e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.68e-07 | 5 |
myotonic disease | 2.68e-07 | 5 |
muscle tissue disease | 2.68e-07 | 5 |
myopathy | 2.68e-07 | 5 |
muscular disease | 2.68e-07 | 5 |
myotonic dystrophy | 2.68e-07 | 5 |