FFCP PHASE1:Hg19::chr1:188783243..188783249,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:188783243..188783249,+ | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_at_chr1:188783243..188783249,+ | |description=CAGE_peak_at_chr1:188783243..188783249,+ | ||
|id=chr1:188783243..188783249,+ | |id=chr1:188783243..188783249,+ | ||
|ontology_enrichment_celltype=CL:0002127!1.20e-07!1;CL:0000914!1.20e-07!1;CL:0000911!1.20e-07!1;CL:0000814!1.20e-07!1;CL:0002042!1.20e-07!1;CL:0002039!1.20e-07!1;CL:0002040!1.20e-07!1;CL:0002041!1.20e-07!1;CL:0000946!1.97e-07!1;CL:0000786!1.97e-07!1;CL:0000980!1.97e-07!1 | |ontology_enrichment_celltype=CL:0002127!1.20e-07!1;CL:0000914!1.20e-07!1;CL:0000911!1.20e-07!1;CL:0000814!1.20e-07!1;CL:0002042!1.20e-07!1;CL:0002039!1.20e-07!1;CL:0002040!1.20e-07!1;CL:0002041!1.20e-07!1;CL:0000946!1.97e-07!1;CL:0000786!1.97e-07!1;CL:0000980!1.97e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.58e-26;1!CL:0000911;3.58e-26;1!CL:0000814;3.58e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.61e-26,1;CL:0000914,4.61e-26,1;CL:0000911,4.61e-26,1;CL:0000814,4.61e-26,1;CL:0002042,4.61e-26,1;CL:0002039,4.61e-26,1;CL:0002040,4.61e-26,1;CL:0002041,4.61e-26,1;CL:0000893,9.40e-14,2;CL:0002489,9.40e-14,2;CL:0000809,9.40e-14,2;CL:0000808,9.40e-14,2;CL:0000894,9.40e-14,2;CL:0000806,9.40e-14,2;CL:0000807,9.40e-14,2;CL:0000805,9.40e-14,2;CL:0002425,9.40e-14,2 | |||
|ontology_enrichment_development_v019=CL:0002425;8.28e-14;2!UBERON:0009117;7.67e-11;10!UBERON:0005564;7.67e-11;10 | |||
|ontology_enrichment_disease=DOID:2531!3.91e-08!51;DOID:0060083!3.91e-08!51;DOID:162!1.74e-07!235;DOID:14566!3.08e-07!239;DOID:178!3.41e-07!1;DOID:326!3.41e-07!1;DOID:3978!3.41e-07!1;DOID:3394!3.41e-07!1;DOID:5844!3.41e-07!1;DOID:2355!6.20e-07!1;DOID:1240!6.76e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.64e-08;39!DOID:8692;8.62e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.05e-10,39;DOID:2531,2.81e-08,51;DOID:0060083,2.81e-08,51;DOID:8692,5.94e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.39e-07!8;UBERON:0000997!5.84e-07!1;UBERON:0005056!5.84e-07!1;UBERON:0001052!6.03e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.65e-13;8!UBERON:0003135;6.06e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.65e-13,8;UBERON:0003135,6.06e-10,11;UBERON:0002370,1.59e-07,4;UBERON:0005058,1.59e-07,4;UBERON:0009113,1.59e-07,4;UBERON:0003295,1.59e-07,4;UBERON:0005562,1.59e-07,4 | |||
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|short_description=p@chr1:188783243..188783249,+ | |short_description=p@chr1:188783243..188783249,+ | ||
}} | }} |
Latest revision as of 01:34, 28 July 2015
Short description: | p@chr1:188783243..188783249, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:188783243..188783249, + |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.61e-26 | 1 |
immature NK T cell | 4.61e-26 | 1 |
effector T cell | 4.61e-26 | 1 |
mature NK T cell | 4.61e-26 | 1 |
immature NK T cell stage IV | 4.61e-26 | 1 |
immature NK T cell stage I | 4.61e-26 | 1 |
immature NK T cell stage II | 4.61e-26 | 1 |
immature NK T cell stage III | 4.61e-26 | 1 |
thymocyte | 9.40e-14 | 2 |
double negative thymocyte | 9.40e-14 | 2 |
double-positive, alpha-beta thymocyte | 9.40e-14 | 2 |
DN4 thymocyte | 9.40e-14 | 2 |
DN1 thymic pro-T cell | 9.40e-14 | 2 |
DN2 thymocyte | 9.40e-14 | 2 |
DN3 thymocyte | 9.40e-14 | 2 |
immature single positive thymocyte | 9.40e-14 | 2 |
early T lineage precursor | 9.40e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 2.65e-13 | 8 |
male reproductive organ | 6.06e-10 | 11 |
thymus | 1.59e-07 | 4 |
hemolymphoid system gland | 1.59e-07 | 4 |
thymic region | 1.59e-07 | 4 |
pharyngeal gland | 1.59e-07 | 4 |
thymus primordium | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.05e-10 | 39 |
hematologic cancer | 2.81e-08 | 51 |
immune system cancer | 2.81e-08 | 51 |
myeloid leukemia | 5.94e-08 | 31 |