FFCP PHASE1:Hg19::chr11:5246822..5246871,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:5246822..5246871,-
|short_description=p4@HBB
|description=CAGE_peak_4_at_HBB_5end
|association_with_transcript=36bp_to_M11428_5end
|EntrezGene=3043
|HGN...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3043 | |EntrezGene=3043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4827 | |HGNC=4827 | ||
|TSSclassifier=strong | |||
|UniProt=P68871 | |UniProt=P68871 | ||
|association_with_transcript=36bp_to_M11428_5end | |||
|cluster_id=chr11:5246822..5246871,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_4_at_HBB_5end | |||
|id=chr11:5246822..5246871,- | |||
|ontology_enrichment_celltype=CL:0002057!3.93e-11!42;CL:0000860!4.42e-10!45 | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.88e-14;2!CL:0000558;5.88e-14;2!CL:0000775;1.77e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.88e-14,2;CL:0000765,5.88e-14,2;CL:0000050,5.88e-14,2;CL:0000038,5.88e-14,2;CL:0000558,5.88e-14,2;CL:0000547,5.88e-14,2;CL:0000549,5.88e-14,2;CL:0000550,5.88e-14,2;CL:0000552,5.88e-14,2;CL:0000775,1.66e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.04e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.88e-34!115;UBERON:0000178!3.85e-17!15;UBERON:0000179!3.85e-17!15;UBERON:0000463!3.85e-17!15;UBERON:0002390!2.21e-11!102;UBERON:0003061!2.21e-11!102;UBERON:0002193!1.19e-09!112;UBERON:0004151!2.37e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.70e-42;15!UBERON:0000179;6.70e-42;15!UBERON:0000463;6.70e-42;15!UBERON:0002390;3.23e-21;32!UBERON:0002193;5.98e-11;42!UBERON:0002134;1.11e-07;1!UBERON:0005208;1.11e-07;1!UBERON:0004145;1.11e-07;1!UBERON:0005946;1.11e-07;1!UBERON:0005965;1.11e-07;1!UBERON:0002078;1.11e-07;1!UBERON:0000941;2.04e-07;1!UBERON:0002171;2.04e-07;1!UBERON:0001785;2.04e-07;1!UBERON:0002464;2.04e-07;1!UBERON:0004904;2.04e-07;1!UBERON:0001021;2.04e-07;1!UBERON:0006518;2.04e-07;1!UBERON:0008949;2.04e-07;1!UBERON:0000101;2.04e-07;1!UBERON:0002167;2.04e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.07e-42,15;UBERON:0000179,9.07e-42,15;UBERON:0000463,9.07e-42,15;UBERON:0007023,9.38e-13,114;UBERON:0002390,6.78e-10,98;UBERON:0003061,6.78e-10,98;UBERON:0002193,9.81e-09,108;UBERON:0002134,1.07e-07,1;UBERON:0005208,1.07e-07,1;UBERON:0005946,1.07e-07,1;UBERON:0005965,1.07e-07,1;UBERON:0002078,1.07e-07,1;UBERON:0002171,1.80e-07,1;UBERON:0006518,1.80e-07,1;UBERON:0008949,1.80e-07,1;UBERON:0000101,1.80e-07,1;UBERON:0002167,1.80e-07,1;UBERON:0000941,2.04e-07,1;UBERON:0001785,2.04e-07,1;UBERON:0002464,2.04e-07,1;UBERON:0004904,2.04e-07,1;UBERON:0001021,2.04e-07,1;UBERON:0003902,2.04e-07,1;UBERON:0005425,2.04e-07,1 | |||
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| ||
|short_description=p4@HBB | |||
}} | }} |
Latest revision as of 07:24, 18 September 2015
Short description: | p4@HBB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HBB_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 36bp_to_M11428_5end |
EntrezGene: | HBB |
HGNC: | 4827 |
UniProt: | P68871 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.88e-14 | 2 |
erythroblast | 5.88e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 5.88e-14 | 2 |
erythroid progenitor cell | 5.88e-14 | 2 |
reticulocyte | 5.88e-14 | 2 |
proerythroblast | 5.88e-14 | 2 |
basophilic erythroblast | 5.88e-14 | 2 |
polychromatophilic erythroblast | 5.88e-14 | 2 |
orthochromatic erythroblast | 5.88e-14 | 2 |
neutrophil | 1.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 9.07e-42 | 15 |
haemolymphatic fluid | 9.07e-42 | 15 |
organism substance | 9.07e-42 | 15 |
adult organism | 9.38e-13 | 114 |
hematopoietic system | 6.78e-10 | 98 |
blood island | 6.78e-10 | 98 |
hemolymphoid system | 9.81e-09 | 108 |
tricuspid valve | 1.07e-07 | 1 |
right atrium valve | 1.07e-07 | 1 |
outflow tract of atrium | 1.07e-07 | 1 |
outflow part of right atrium | 1.07e-07 | 1 |
right cardiac atrium | 1.07e-07 | 1 |
lower lobe of right lung | 1.80e-07 | 1 |
right lung lobe | 1.80e-07 | 1 |
lower lobe of lung | 1.80e-07 | 1 |
lobe of lung | 1.80e-07 | 1 |
right lung | 1.80e-07 | 1 |
cranial nerve II | 2.04e-07 | 1 |
cranial nerve | 2.04e-07 | 1 |
nerve trunk | 2.04e-07 | 1 |
nerve connecting eye with brain | 2.04e-07 | 1 |
nerve | 2.04e-07 | 1 |
retinal neural layer | 2.04e-07 | 1 |
presumptive neural retina | 2.04e-07 | 1 |