FFCP PHASE1:Hg19::chr11:59578202..59578274,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:59578202..59578274,-
|short_description=p1@MRPL16
|description=CAGE_peak_1_at_MRPL16_5end
|association_with_transcript=0bp_to_ENST00000531802_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54948 | |EntrezGene=54948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14476 | |HGNC=14476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000531802_5end | |||
|cluster_id=chr11:59578202..59578274,- | |||
|description=CAGE_peak_1_at_MRPL16_5end | |||
|id=chr11:59578202..59578274,- | |||
|ontology_enrichment_celltype=CL:0000012!7.12e-13!682;CL:0000548!6.40e-12!679;CL:0000004!6.40e-12!679;CL:0000255!6.40e-12!679;CL:0000003!8.11e-09!722;CL:0000066!1.95e-08!254;CL:1000449!4.79e-08!16;CL:0000144!2.17e-07!625;CL:0000063!5.71e-07!578;CL:0002681!7.84e-07!13;CL:0002584!7.84e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.44e-08;15!CL:0002681;5.58e-07;12!CL:0002584;5.58e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.26e-08,253;CL:1000449,3.51e-08,15;CL:0002681,5.68e-07,12;CL:0002584,5.68e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.92e-18!51;DOID:0060083!1.92e-18!51;DOID:1240!5.80e-16!39;DOID:8692!6.34e-15!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.53e-14;31!DOID:1240;7.94e-13;39!DOID:2531;2.02e-11;51!DOID:0060083;2.02e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.92e-18,51;DOID:0060083,1.92e-18,51;DOID:1240,5.80e-16,39;DOID:8692,6.34e-15,31 | |||
|ontology_enrichment_uberon=UBERON:0004211!4.79e-08!16;UBERON:0001285!4.79e-08!16;UBERON:0007684!4.79e-08!16;UBERON:0003220!4.79e-08!16;UBERON:0004208!4.79e-08!16;UBERON:0001737!5.05e-07!9;UBERON:0006555!5.34e-07!17;UBERON:0005103!5.34e-07!17;UBERON:0000083!5.34e-07!17;UBERON:0009201!5.34e-07!17;UBERON:0004819!5.34e-07!17;UBERON:0006553!5.34e-07!17;UBERON:0003074!5.34e-07!17;UBERON:0003060!5.34e-07!17;UBERON:0001225!7.84e-07!13;UBERON:0008987!7.84e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.44e-08;15!UBERON:0004819;3.44e-08;15!UBERON:0001285;3.44e-08;15!UBERON:0007684;3.44e-08;15!UBERON:0001737;5.16e-07;9!UBERON:0001557;5.16e-07;9!UBERON:0001225;5.58e-07;12!UBERON:0008987;5.58e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,3.51e-08,15;UBERON:0009773,3.51e-08,15;UBERON:0001231,3.51e-08,15;UBERON:0001285,3.51e-08,15;UBERON:0007684,3.51e-08,15;UBERON:0004208,3.51e-08,15;UBERON:0006555,4.46e-07,16;UBERON:0004819,4.46e-07,16;UBERON:0001737,5.05e-07,9;UBERON:0001225,5.68e-07,12;UBERON:0008987,5.68e-07,12 | |||
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02460067 | ||
|short_description=p1@MRPL16 | |||
}} | }} |
Latest revision as of 12:46, 18 September 2015
Short description: | p1@MRPL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000531802_5end |
EntrezGene: | MRPL16 |
HGNC: | 14476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.26e-08 | 253 |
epithelial cell of nephron | 3.51e-08 | 15 |
kidney cortical cell | 5.68e-07 | 12 |
renal cortical epithelial cell | 5.68e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 3.51e-08 | 15 |
renal tubule | 3.51e-08 | 15 |
nephron tubule | 3.51e-08 | 15 |
nephron | 3.51e-08 | 15 |
uriniferous tubule | 3.51e-08 | 15 |
nephrogenic mesenchyme | 3.51e-08 | 15 |
excretory tube | 4.46e-07 | 16 |
kidney epithelium | 4.46e-07 | 16 |
larynx | 5.05e-07 | 9 |
cortex of kidney | 5.68e-07 | 12 |
renal parenchyma | 5.68e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.92e-18 | 51 |
immune system cancer | 1.92e-18 | 51 |
leukemia | 5.80e-16 | 39 |
myeloid leukemia | 6.34e-15 | 31 |