FFCP PHASE1:Hg19::chr1:241695549..241695560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8564 | |EntrezGene=8564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6381 | |HGNC=6381 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-77bp_to_ENST00000484628_5end | |association_with_transcript=-77bp_to_ENST00000484628_5end | ||
|cluster_id=chr1:241695549..241695560,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_KMO_5end | |description=CAGE_peak_4_at_KMO_5end | ||
|id=chr1:241695549..241695560,+ | |id=chr1:241695549..241695560,+ | ||
|ontology_enrichment_celltype=CL:0002087!2.09e-77!119;CL:0000738!1.38e-76!140;CL:0002031!7.59e-65!124;CL:0000037!2.16e-61!172;CL:0000566!2.16e-61!172;CL:0002194!1.10e-59!63;CL:0000576!1.10e-59!63;CL:0000040!1.10e-59!63;CL:0000559!1.10e-59!63;CL:0002057!7.85e-59!42;CL:0002009!2.12e-57!65;CL:0000988!9.50e-57!182;CL:0002032!2.91e-56!165;CL:0000837!2.91e-56!165;CL:0000860!4.67e-54!45;CL:0000839!2.98e-52!70;CL:0000766!2.45e-51!76;CL:0000557!2.61e-51!71;CL:0000945!5.59e-38!24;CL:0000826!5.59e-38!24;CL:0000763!2.60e-37!112;CL:0000049!2.60e-37!112;CL:0000236!9.52e-24!14;CL:0000134!2.31e-18!358;CL:0002320!1.40e-17!365;CL:0000542!3.88e-16!53;CL:0000051!3.88e-16!53;CL:0002393!3.58e-15!9;CL:0002397!3.58e-15!9;CL:0000838!5.93e-15!52;CL:0000219!7.64e-15!390;CL:0000048!1.30e-11!430;CL:0000723!3.71e-11!436;CL:0000034!4.00e-11!444;CL:0000451!7.68e-11!10;CL:0000990!3.85e-08!8 | |ontology_enrichment_celltype=CL:0002087!2.09e-77!119;CL:0000738!1.38e-76!140;CL:0002031!7.59e-65!124;CL:0000037!2.16e-61!172;CL:0000566!2.16e-61!172;CL:0002194!1.10e-59!63;CL:0000576!1.10e-59!63;CL:0000040!1.10e-59!63;CL:0000559!1.10e-59!63;CL:0002057!7.85e-59!42;CL:0002009!2.12e-57!65;CL:0000988!9.50e-57!182;CL:0002032!2.91e-56!165;CL:0000837!2.91e-56!165;CL:0000860!4.67e-54!45;CL:0000839!2.98e-52!70;CL:0000766!2.45e-51!76;CL:0000557!2.61e-51!71;CL:0000945!5.59e-38!24;CL:0000826!5.59e-38!24;CL:0000763!2.60e-37!112;CL:0000049!2.60e-37!112;CL:0000236!9.52e-24!14;CL:0000134!2.31e-18!358;CL:0002320!1.40e-17!365;CL:0000542!3.88e-16!53;CL:0000051!3.88e-16!53;CL:0002393!3.58e-15!9;CL:0002397!3.58e-15!9;CL:0000838!5.93e-15!52;CL:0000219!7.64e-15!390;CL:0000048!1.30e-11!430;CL:0000723!3.71e-11!436;CL:0000034!4.00e-11!444;CL:0000451!7.68e-11!10;CL:0000990!3.85e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.13e-55;33!CL:0002057;6.13e-55;33!CL:0000473;5.81e-40;39!CL:0000234;5.81e-40;39!CL:0000945;1.80e-38;24!CL:0000236;2.29e-38;13!CL:0000576;1.43e-36;48!CL:0002087;7.75e-21;104!CL:0000766;5.77e-18;69!CL:0000542;6.92e-13;53!CL:0000738;1.72e-12;136!CL:0002393;8.86e-09;6!CL:0002397;8.86e-09;6!CL:0000763;2.64e-08;100!CL:0000988;8.09e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.70e-61,42;CL:0002057,1.70e-61,42;CL:0002087,4.63e-61,115;CL:0000473,9.68e-57,48;CL:0000234,9.68e-57,48;CL:0002031,2.68e-55,120;CL:0000738,2.91e-52,136;CL:0002194,7.33e-47,59;CL:0000576,7.33e-47,59;CL:0000040,7.33e-47,59;CL:0000559,7.33e-47,59;CL:0002009,4.36e-45,61;CL:0000839,4.10e-41,66;CL:0002032,1.62e-40,161;CL:0000837,1.62e-40,161;CL:0000557,2.17e-40,67;CL:0000037,3.30e-40,168;CL:0000945,1.63e-38,24;CL:0000826,1.63e-38,24;CL:0000988,1.35e-37,177;CL:0000766,4.56e-37,72;CL:0000236,1.54e-35,14;CL:0000763,3.53e-22,108;CL:0000049,3.53e-22,108;CL:0000542,4.19e-17,53;CL:0000051,4.19e-17,53;CL:0000838,2.06e-15,52;CL:0000134,3.73e-13,354;CL:0002320,1.11e-12,361;CL:0000219,5.18e-11,386;CL:0000048,5.58e-09,427;CL:0000723,1.06e-08,433;CL:0000034,2.44e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.35e-43;42!CL:0000051;6.92e-13;53!CL:0000049;5.78e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.97e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.92e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.70e-57!102;UBERON:0003061!2.70e-57!102;UBERON:0002193!1.56e-54!112;UBERON:0002371!7.19e-46!80;UBERON:0001474!1.26e-41!86;UBERON:0002405!5.05e-38!115;UBERON:0004765!3.13e-33!101;UBERON:0001434!3.13e-33!101;UBERON:0003081!5.25e-21!216;UBERON:0002384!1.61e-16!375;UBERON:0002204!1.72e-14!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.94e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.56e-42,98;UBERON:0003061,1.56e-42,98;UBERON:0002193,5.21e-40,108;UBERON:0002405,1.79e-35,93;UBERON:0002371,1.01e-34,76;UBERON:0001474,1.26e-31,82;UBERON:0004765,3.86e-28,90;UBERON:0001434,1.45e-24,100;UBERON:0003081,1.03e-15,203;UBERON:0002384,4.93e-12,371;UBERON:0002204,1.07e-11,167;UBERON:0002106,3.08e-10,3;UBERON:0004854,3.08e-10,3;UBERON:0009034,3.08e-10,3;UBERON:0002095,3.08e-10,3;UBERON:0004782,3.08e-10,3;UBERON:0003281,3.08e-10,3;UBERON:0009664,3.08e-10,3;UBERON:0002296,3.08e-10,3;UBERON:0005602,3.08e-10,3;UBERON:0001179,3.08e-10,3;UBERON:0006293,3.08e-10,3;UBERON:0000926,5.71e-07,315;UBERON:0004120,5.71e-07,315;UBERON:0006603,5.71e-07,315 | |||
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|short_description=p4@KMO | |short_description=p4@KMO | ||
}} | }} |
Latest revision as of 17:59, 16 September 2015
Short description: | p4@KMO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KMO_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -77bp_to_ENST00000484628_5end |
EntrezGene: | KMO |
HGNC: | 6381 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.56e-42 | 98 |
blood island | 1.56e-42 | 98 |
hemolymphoid system | 5.21e-40 | 108 |
immune system | 1.79e-35 | 93 |
bone marrow | 1.01e-34 | 76 |
bone element | 1.26e-31 | 82 |
skeletal element | 3.86e-28 | 90 |
skeletal system | 1.45e-24 | 100 |
lateral plate mesoderm | 1.03e-15 | 203 |
connective tissue | 4.93e-12 | 371 |
musculoskeletal system | 1.07e-11 | 167 |
spleen | 3.08e-10 | 3 |
gastrointestinal system mesentery | 3.08e-10 | 3 |
stomach region | 3.08e-10 | 3 |
mesentery | 3.08e-10 | 3 |
gastrointestinal system serosa | 3.08e-10 | 3 |
mesentery of stomach | 3.08e-10 | 3 |
gut mesentery | 3.08e-10 | 3 |
dorsal mesentery | 3.08e-10 | 3 |
dorsal mesogastrium | 3.08e-10 | 3 |
peritoneal cavity | 3.08e-10 | 3 |
spleen primordium | 3.08e-10 | 3 |
mesoderm | 5.71e-07 | 315 |
mesoderm-derived structure | 5.71e-07 | 315 |
presumptive mesoderm | 5.71e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.92e-08 | 10 |