FFCP PHASE1:Hg19::chr11:61582579..61582646,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:61582579..61582646,-
|short_description=p7@FADS1
|description=CAGE_peak_7_at_FADS1_5end
|association_with_transcript=0bp_to_ENST00000412725,ENST0000053941...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3992 | |EntrezGene=3992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3574 | |HGNC=3574 | ||
|UniProt=O60427, | |TSSclassifier=strong | ||
|UniProt=O60427,F5H1Q7,F5H852,F5GYH4 | |||
|association_with_transcript=0bp_to_ENST00000412725,ENST00000539419,ENST00000545245,ENST00000545405,uc010rln.1_5end | |||
|cluster_id=chr11:61582579..61582646,- | |||
|description=CAGE_peak_7_at_FADS1_5end | |||
|id=chr11:61582579..61582646,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.29e-07!106;DOID:0050687!9.64e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.99e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000119!1.05e-13!312;UBERON:0000483!4.11e-13!309;UBERON:0000475!2.87e-12!365;UBERON:0000064!5.52e-12!219;UBERON:0000481!3.55e-11!347;UBERON:0005743!4.56e-11!86;UBERON:0000073!4.60e-11!94;UBERON:0001016!4.60e-11!94;UBERON:0000922!5.28e-11!612;UBERON:0000468!7.22e-11!659;UBERON:0003075!1.01e-10!86;UBERON:0007284!1.01e-10!86;UBERON:0000923!1.46e-10!604;UBERON:0005291!1.46e-10!604;UBERON:0006598!1.46e-10!604;UBERON:0002532!1.46e-10!604;UBERON:0002050!1.81e-10!605;UBERON:0005423!1.81e-10!605;UBERON:0000467!5.35e-10!625;UBERON:0001017!6.10e-10!82;UBERON:0002346!6.50e-10!90;UBERON:0000480!9.55e-10!626;UBERON:0000062!2.78e-09!511;UBERON:0000477!7.53e-09!286;UBERON:0004121!9.17e-09!169;UBERON:0000955!9.23e-09!69;UBERON:0006238!9.23e-09!69;UBERON:0000924!2.50e-08!173;UBERON:0006601!2.50e-08!173;UBERON:0000033!3.25e-08!123;UBERON:0001049!4.43e-08!57;UBERON:0005068!4.43e-08!57;UBERON:0006241!4.43e-08!57;UBERON:0007135!4.43e-08!57;UBERON:0002616!4.60e-08!59;UBERON:0003056!5.34e-08!61;UBERON:0000063!2.40e-07!97;UBERON:0000025!2.48e-07!194 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,6.35e-11,223;UBERON:0000119,6.52e-11,309;UBERON:0003075,1.90e-10,82;UBERON:0007284,1.90e-10,82;UBERON:0000483,2.45e-10,306;UBERON:0001017,5.35e-10,81;UBERON:0001016,1.00e-09,89;UBERON:0002346,4.77e-09,86;UBERON:0000955,4.81e-09,68;UBERON:0006238,4.81e-09,68;UBERON:0001049,7.40e-09,56;UBERON:0005068,7.40e-09,56;UBERON:0006241,7.40e-09,56;UBERON:0007135,7.40e-09,56;UBERON:0000073,1.00e-08,53;UBERON:0002616,1.00e-08,53;UBERON:0010314,1.55e-08,132;UBERON:0010371,2.39e-08,104;UBERON:0003056,5.26e-08,61;UBERON:0004121,1.79e-07,171;UBERON:0000924,1.79e-07,171;UBERON:0006601,1.79e-07,171 | |||
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| ||
|short_description=p7@FADS1 | |||
}} | }} |
Latest revision as of 17:00, 18 September 2015
Short description: | p7@FADS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FADS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412725, ENST00000539419, ENST00000545245, ENST00000545405, uc010rln.1_5end |
EntrezGene: | FADS1 |
HGNC: | 3574 |
UniProt: | O60427F5H1Q7F5H852F5GYH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 6.35e-11 | 223 |
cell layer | 6.52e-11 | 309 |
neural plate | 1.90e-10 | 82 |
presumptive neural plate | 1.90e-10 | 82 |
epithelium | 2.45e-10 | 306 |
central nervous system | 5.35e-10 | 81 |
nervous system | 1.00e-09 | 89 |
neurectoderm | 4.77e-09 | 86 |
brain | 4.81e-09 | 68 |
future brain | 4.81e-09 | 68 |
neural tube | 7.40e-09 | 56 |
neural rod | 7.40e-09 | 56 |
future spinal cord | 7.40e-09 | 56 |
neural keel | 7.40e-09 | 56 |
regional part of nervous system | 1.00e-08 | 53 |
regional part of brain | 1.00e-08 | 53 |
structure with developmental contribution from neural crest | 1.55e-08 | 132 |
ecto-epithelium | 2.39e-08 | 104 |
pre-chordal neural plate | 5.26e-08 | 61 |
ectoderm-derived structure | 1.79e-07 | 171 |
ectoderm | 1.79e-07 | 171 |
presumptive ectoderm | 1.79e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.99e-07 | 106 |