FFCP PHASE1:Hg19::chr11:67141640..67141651,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:67141640..67141651,-
|short_description=p2@CLCF1
|description=CAGE_peak_2_at_CLCF1_5end
|association_with_transcript=0bp_to_ENST00000533438,NM_001166212,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23529 | |EntrezGene=23529 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17412 | |HGNC=17412 | ||
|UniProt=B4DNT4, | |TSSclassifier=strong | ||
|UniProt=B4DNT4,Q9UBD9 | |||
|association_with_transcript=0bp_to_ENST00000533438,NM_001166212,uc010rpp.1_5end | |||
|cluster_id=chr11:67141640..67141651,- | |||
|description=CAGE_peak_2_at_CLCF1_5end | |||
|id=chr11:67141640..67141651,- | |||
|ontology_enrichment_celltype=CL:0000066!4.81e-22!254;CL:0002321!1.26e-15!248;CL:0000220!2.93e-15!246;CL:0000222!2.02e-11!119;CL:0002139!1.88e-10!24;CL:0000213!2.24e-10!57;CL:0000215!2.24e-10!57;CL:0002078!8.23e-10!44;CL:0000115!8.32e-10!35;CL:0000076!8.02e-09!62;CL:0002620!1.31e-08!23;CL:0000071!1.07e-07!18;CL:0002546!1.07e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.18e-15;24!CL:0000115;2.76e-12;36!CL:1000507;3.85e-11;10!CL:1000494;3.85e-11;10!CL:1000449;9.38e-10;15!CL:0000071;1.79e-09;18!CL:0002078;9.31e-09;45!CL:1000497;1.79e-08;17!CL:0002518;1.79e-08;17!CL:0002543;3.90e-08;6!CL:0002138;3.90e-08;6!CL:0000213;6.85e-08;58!CL:0000215;6.85e-08;58!CL:0000159;2.43e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.27e-15,24;CL:0000115,1.41e-15,36;CL:0000066,1.06e-14,253;CL:0002078,1.84e-13,45;CL:0000213,1.36e-12,58;CL:0000215,1.36e-12,58;CL:1000507,3.39e-11,10;CL:1000494,3.39e-11,10;CL:0000222,3.89e-10,121;CL:1000449,8.54e-10,15;CL:0000071,1.13e-09,18;CL:0002546,1.13e-09,18;CL:0002321,1.21e-08,250;CL:1000497,1.65e-08,17;CL:0002518,1.65e-08,17;CL:0005020,3.80e-08,6;CL:0002138,3.80e-08,6;CL:0005022,3.80e-08,6;CL:0002543,5.37e-08,6;CL:0000159,1.71e-07,2;CL:0000076,2.15e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.79e-09;18!CL:0005022;3.90e-08;6 | |||
|ontology_enrichment_disease=DOID:305!2.67e-10!106;DOID:0050687!1.53e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!9.14e-13!118;UBERON:0000055!2.36e-11!69;UBERON:0000468!1.18e-10!659;UBERON:0001981!2.44e-10!60;UBERON:0007500!2.44e-10!60;UBERON:0004537!2.44e-10!60;UBERON:0006965!2.44e-10!60;UBERON:0002049!2.64e-10!79;UBERON:0007798!2.64e-10!79;UBERON:0000467!2.02e-09!625;UBERON:0000480!2.82e-09!626;UBERON:0000119!4.30e-09!312;UBERON:0000483!5.95e-09!309;UBERON:0000481!1.80e-08!347;UBERON:0004872!1.88e-08!84;UBERON:0000477!1.92e-08!286;UBERON:0004111!2.15e-08!241;UBERON:0000490!3.27e-08!138;UBERON:0003104!4.14e-08!238;UBERON:0009142!4.14e-08!238;UBERON:0000487!4.58e-08!22;UBERON:0001986!1.07e-07!18;UBERON:0004638!1.07e-07!18;UBERON:0004852!1.07e-07!18;UBERON:0000475!1.09e-07!365;UBERON:0006914!1.43e-07!25;UBERON:0001637!2.36e-07!42;UBERON:0003509!2.36e-07!42;UBERON:0004572!2.36e-07!42;UBERON:0004573!3.18e-07!33;UBERON:0004571!3.18e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.85e-11;10!UBERON:0009773;3.85e-11;10!UBERON:0001231;3.85e-11;10!UBERON:0004810;3.85e-11;10!UBERON:0006555;9.38e-10;15!UBERON:0004819;9.38e-10;15!UBERON:0001285;9.38e-10;15!UBERON:0007684;9.38e-10;15!UBERON:0004638;1.79e-09;18!UBERON:0001986;1.79e-09;18!UBERON:0004852;1.79e-09;18!UBERON:0002113;3.79e-09;24!UBERON:0011143;3.79e-09;24!UBERON:0000489;5.92e-09;29!UBERON:0006554;1.38e-08;30!UBERON:0001008;1.38e-08;30!UBERON:0000487;1.65e-07;22!UBERON:0003914;2.24e-07;74!UBERON:0000353;2.29e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.39e-11,10;UBERON:0000055,6.51e-10,68;UBERON:0004211,8.54e-10,15;UBERON:0009773,8.54e-10,15;UBERON:0001231,8.54e-10,15;UBERON:0001285,8.54e-10,15;UBERON:0007684,8.54e-10,15;UBERON:0004208,8.54e-10,15;UBERON:0004638,1.13e-09,18;UBERON:0001986,1.13e-09,18;UBERON:0004852,1.13e-09,18;UBERON:0002049,3.69e-09,78;UBERON:0007798,3.69e-09,78;UBERON:0006555,4.12e-09,16;UBERON:0004819,4.12e-09,16;UBERON:0003914,4.26e-09,117;UBERON:0002113,3.04e-08,26;UBERON:0003918,3.04e-08,26;UBERON:0011143,3.04e-08,26;UBERON:0005095,3.04e-08,26;UBERON:0007687,3.04e-08,26;UBERON:0000489,4.08e-08,31;UBERON:0000487,1.15e-07,22;UBERON:0000353,2.60e-07,15;UBERON:0007500,7.03e-07,59;UBERON:0001981,7.03e-07,59;UBERON:0004537,7.03e-07,59;UBERON:0006965,7.03e-07,59 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0.982935746006035,0,0.655324116390517,0,0.247532705920093,0,0,1.20538905604795,0,0,0.369363174230364,0.408001382488506,0.626909442956176,0.85870796139317,0.410623275218653,0.627713197974014,0,0,0,0.393364276848904,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0.689491361473237,0,0,0.376484679085209,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.945348171640679,0,0.43917392846563,0.261958150995425,0,0.370784442784429,0.324547393654683,0,0,0,0,0,0.79504962946682,1.72046919021225,0.347140501607594,0.56530794192401,0.419499436209906,0,0.208994966536811,0.258416759169329,0.35576626268671,1.33888245105868,2.01414658554573,0,1.95249646038536,1.47065232138347,0.81014194788176,1.07159673940896,1.12264686313085,0.450445921933289,1.53316637465883,0.949265659568129,1.09921046358244,0,0,0,0.993943903390637,0.12663051166458,0.926864265692532,0.573673241497627,0.709336764396714,0,1.06748995729705,0.24666754841716,0,0.808264032418128,0.490385709340376,0,0,0,0.312160076830321,1.1409436430889,0.448346041655403,0,0.323745888736263,0.561803226808994,0.204154171254893,0.491337269247072,0.309977343527296,0,0.247266929278557,0,0,0.336672227908132,0.375355559615893,0,0,0.612975591598039,0,0.340296549480063,0.89694817844431,0.640672166455702,0.635795703478686,0.600182192168805,0.515262646192195,0.515281080091258,0.37223371266318,0.506328996723799,0.194874010322397,0.757301322732344,0.552299391853796,0.80823028409406,2.13005755509969,0.201504196455281,0.508681776931463,0,0,0,0.609868530647977,0.132529768321485,0.116193942869518,0.310983165046111,0.504641701751257,0,1.56449532329816,0,1.38134921352481,0.928735856063958,0.721879481669586,0,0.168584690078102,0.482022059766964,0.330881918197182,0,0.71181185733329,0.269662616320329,0.196221465125346,0.38474715694639,0.738155454624648,2.80483547606892,0,0,0,0,0,0,0.737930631258681,0,0,1.1240175325762,0,0.185176890317059,0.325808305310325,0,1.44331342025273,0.811512834825538,0,1.01056513432752,1.85194205030644,1.14152491340759,1.58040879591855,0,0,0,0,0,0.335964256397719,0,0.53735113621709,0.581267877027924,0.383382679165211,0.492663237895943,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.336393253036082,0,0.36669142910475,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0.434343920002738,0.61642896765115,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0,1.24782516918484,1.07057393278297,0.315404830067869,1.28855556491985,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0.966875596732978,0,0.460404944679482,0.114814448164607,0,0.131124414959424,2.25599806453706,2.15642943892361,1.56869953835371,0,2.63879072232189,3.4120015221269,0.170093705276516,0.431831832204279,0,0,2.00675909541941,0.764628819135115,0,1.11937377361089,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.103041011647722,0,0,0,0,0,0.290012154876366,0.308097234229289,0.460511024178389,0,0.107420244868274,1.30515024522806,0.255679882248303,0.178064071293475,0,0.192190067365106,0.255225424989168,0.2023155617111,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0.869932992075073,1.11194531462352,0.286249773483982,0,0,0,0.255897791311334,0,0.636406495851874,0.78494864019923,0,0.274537029736055,0,0.606547444719948,1.58510321173008,0.421258456238981,0.975267478179181,0.243713489631284,0,0,0,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,1.01455188481352,0.6196469961995,0,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0.329294892959902,0.379473173765715,1.04980416073495,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.490080431962063,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.284136146806413,1.19372242368845,0,2.45728561679386,0,0,0.222617410045812,0,0.422250816255987,0,0,0,2.45444838005172,0,0.933118762985422,1.25815691606258,0.895105873378046,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0.349839999984783,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0.139423744278603,0.230850775511391,0.227884111694002,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0.843992258112108,6.52931232636591,0.282706142867882,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0.627865836814451,0,0.284609546029793,1.24807205711825,0.520679215005393,0.5879543844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| 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| ||
|short_description=p2@CLCF1 | |||
}} | }} |
Latest revision as of 17:43, 19 September 2015
Short description: | p2@CLCF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLCF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000533438, NM_001166212, uc010rpp.1_5end |
EntrezGene: | CLCF1 |
HGNC: | 17412 |
UniProt: | B4DNT4Q9UBD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.27e-15 | 24 |
endothelial cell | 1.41e-15 | 36 |
epithelial cell | 1.06e-14 | 253 |
meso-epithelial cell | 1.84e-13 | 45 |
lining cell | 1.36e-12 | 58 |
barrier cell | 1.36e-12 | 58 |
kidney tubule cell | 3.39e-11 | 10 |
nephron tubule epithelial cell | 3.39e-11 | 10 |
mesodermal cell | 3.89e-10 | 121 |
epithelial cell of nephron | 8.54e-10 | 15 |
blood vessel endothelial cell | 1.13e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.13e-09 | 18 |
embryonic cell | 1.21e-08 | 250 |
kidney cell | 1.65e-08 | 17 |
kidney epithelial cell | 1.65e-08 | 17 |
lymphangioblast | 3.80e-08 | 6 |
endothelial cell of lymphatic vessel | 3.80e-08 | 6 |
vascular lymphangioblast | 3.80e-08 | 6 |
vein endothelial cell | 5.37e-08 | 6 |
seromucus secreting cell | 1.71e-07 | 2 |
squamous epithelial cell | 2.15e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.39e-11 | 10 |
vessel | 6.51e-10 | 68 |
nephron epithelium | 8.54e-10 | 15 |
renal tubule | 8.54e-10 | 15 |
nephron tubule | 8.54e-10 | 15 |
nephron | 8.54e-10 | 15 |
uriniferous tubule | 8.54e-10 | 15 |
nephrogenic mesenchyme | 8.54e-10 | 15 |
blood vessel endothelium | 1.13e-09 | 18 |
endothelium | 1.13e-09 | 18 |
cardiovascular system endothelium | 1.13e-09 | 18 |
vasculature | 3.69e-09 | 78 |
vascular system | 3.69e-09 | 78 |
excretory tube | 4.12e-09 | 16 |
kidney epithelium | 4.12e-09 | 16 |
epithelial tube | 4.26e-09 | 117 |
kidney | 3.04e-08 | 26 |
kidney mesenchyme | 3.04e-08 | 26 |
upper urinary tract | 3.04e-08 | 26 |
kidney rudiment | 3.04e-08 | 26 |
kidney field | 3.04e-08 | 26 |
cavitated compound organ | 4.08e-08 | 31 |
simple squamous epithelium | 1.15e-07 | 22 |
parenchyma | 2.60e-07 | 15 |
epithelial tube open at both ends | 7.03e-07 | 59 |
blood vessel | 7.03e-07 | 59 |
blood vasculature | 7.03e-07 | 59 |
vascular cord | 7.03e-07 | 59 |