FFCP PHASE1:Hg19::chr11:74109574..74109604,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:74109574..74109604,+
|short_description=p@chr11:74109574..74109604,+
|description=CAGE_peak_at_chr11:74109574..74109604,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:74109574..74109604,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:74109574..74109604,+ | |||
|id=chr11:74109574..74109604,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.59e-18!45;CL:0002057!1.33e-16!42;CL:0000839!7.31e-16!70;CL:0000557!2.44e-15!71;CL:0002194!4.66e-14!63;CL:0000576!4.66e-14!63;CL:0000040!4.66e-14!63;CL:0000559!4.66e-14!63;CL:0002009!6.51e-14!65;CL:0000766!3.58e-12!76;CL:0000988!6.10e-12!182;CL:0000763!1.08e-11!112;CL:0000049!1.08e-11!112;CL:0000144!3.29e-11!625;CL:0002031!2.57e-10!124;CL:0000037!1.03e-09!172;CL:0000566!1.03e-09!172;CL:0000012!1.19e-09!682;CL:0000548!2.98e-09!679;CL:0000004!2.98e-09!679;CL:0000255!2.98e-09!679;CL:0000738!3.78e-09!140;CL:0002032!4.91e-09!165;CL:0000837!4.91e-09!165;CL:0002371!1.55e-08!591;CL:0002087!1.60e-08!119;CL:0000003!7.33e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.98e-56;33!CL:0002057;2.98e-56;33!CL:0000473;3.60e-38;39!CL:0000234;3.60e-38;39!CL:0000576;1.98e-27;48!CL:0000766;2.80e-17;69!CL:1000746;3.46e-10;7!CL:1000612;3.46e-10;7!CL:0002188;1.73e-09;5!CL:0000763;4.83e-08;100!CL:0002087;5.48e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.62e-50,42;CL:0002057,4.62e-50,42;CL:0000473,7.80e-43,48;CL:0000234,7.80e-43,48;CL:0002194,9.95e-33,59;CL:0000576,9.95e-33,59;CL:0000040,9.95e-33,59;CL:0000559,9.95e-33,59;CL:0002009,1.99e-31,61;CL:0000839,6.58e-31,66;CL:0000557,2.45e-30,67;CL:0000766,1.01e-27,72;CL:0000763,2.42e-17,108;CL:0000049,2.42e-17,108;CL:0002031,4.30e-16,120;CL:0002087,9.23e-16,115;CL:0000738,2.11e-14,136;CL:0000988,9.03e-13,177;CL:0000037,4.85e-11,168;CL:0002032,6.13e-11,161;CL:0000837,6.13e-11,161;CL:1000746,4.97e-10,7;CL:1000612,4.97e-10,7;CL:0002188,1.74e-09,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-38;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.27e-14!80;UBERON:0001474!4.96e-13!86;UBERON:0002390!9.03e-12!102;UBERON:0003061!9.03e-12!102;UBERON:0003081!9.31e-12!216;UBERON:0002193!1.23e-11!112;UBERON:0002405!5.92e-11!115;UBERON:0004765!1.06e-09!101;UBERON:0001434!1.06e-09!101;UBERON:0002204!5.60e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;3.46e-10;7!UBERON:0001229;3.46e-10;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.59e-28,76;UBERON:0001474,1.88e-25,82;UBERON:0002390,1.78e-23,98;UBERON:0003061,1.78e-23,98;UBERON:0002405,2.12e-23,93;UBERON:0004765,1.63e-22,90;UBERON:0002193,1.50e-20,108;UBERON:0001434,1.68e-19,100;UBERON:0003081,4.16e-19,203;UBERON:0002204,2.50e-12,167;UBERON:0000926,1.26e-10,315;UBERON:0004120,1.26e-10,315;UBERON:0006603,1.26e-10,315;UBERON:0010532,4.97e-10,7;UBERON:0000074,4.97e-10,7;UBERON:0001229,4.97e-10,7;UBERON:0001230,4.97e-10,7;UBERON:0003220,4.97e-10,7;UBERON:0005749,4.97e-10,7;UBERON:0004199,4.97e-10,7;UBERON:0004209,4.97e-10,7;UBERON:0004198,4.97e-10,7;UBERON:0005103,9.67e-09,8;UBERON:0000083,9.67e-09,8;UBERON:0009201,9.67e-09,8;UBERON:0006553,9.67e-09,8;UBERON:0003074,9.67e-09,8;UBERON:0003060,9.67e-09,8;UBERON:0000080,9.75e-08,9;UBERON:0002120,9.75e-08,9;UBERON:0004875,9.75e-08,9;UBERON:0005721,9.75e-08,9;UBERON:0005754,9.75e-08,9;UBERON:0007297,9.75e-08,9 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,2.53299878168311,0,0,0,1.39560233594486,0.436882744260345,0,0,0,0,0,0,0,0.61560529038394,1.22400414746552,0.626909442956176,0,0.547497700291537,0.376627918784408,0.229240217243854,0.164201178899891,0.236132343941038,0,0,0,1.83884244895785,1.204823675113,0,0,0,0.293600439334847,0,0.200544447470142,1.08505435357926,0.223915474239924,0,0.257575567634187,0.872389432677388,2.26725566213286,2.66842467306598,2.55671940596253,1.6446715520873,8.05236564327269,2.01384674625505,2.30544635876191,2.12834006899727,5.86067657252252,7.10033151942209,12.1883837934908,1.69418105588344,2.45615535052061,5.61808711112712,2.14258724659632,3.85114832491312,5.11469700639233,0.659702600373432,0.997318288108159,0.852449501065388,3.19230162491442,5.10646702222026,8.71951148593805,2.00998932205395,3.65038042894141,6.29847649644838,6.65939452896706,8.47038562771399,6.96217252369946,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,1.28019066769952,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,1.02800749499755,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.25618263945135,0,0.164437904603676,0,0,0,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0.378139268656271,0,0.263504357079378,0,0,0.370784442784429,0.324547393654683,0,0.531831842075461,0.476981248610684,0.571994910780128,0.371457501329565,1.39133685156694,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.835979866147242,0,0.35576626268671,0.66944122552934,0.402829317109147,1.52054421143703,0.488124115096339,1.47065232138347,0.81014194788176,0.0892997282840798,0,0.337834441449967,1.53316637465883,0,0.366403487860815,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,0,0.49333509683432,0.622422070799533,0.269421344139376,0.163461903113459,0.454072282934794,0,0.234321431833797,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0.245668634623536,0.723280468230358,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0,0.412210116953756,0,0,0.506328996723799,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.339121184620975,0,0,0.286804595389004,0.121973706129595,0,0.348581828608555,0.10366105501537,0,0.72995471815166,0,1.28648187638577,0,0,0,0,0.337169380156203,0.723033089650446,0.110293972732394,0,0,0.134831308160164,0.588664395376038,0,0,0,0.4115740113314,0,0,0,0,1.32438929824395,0.368965315629341,0.343135620597051,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,1.44331342025273,0,0,0.144366447761074,0.925971025153221,0.570762456703795,0.790204397959275,1.71697232418975,0,0,0.148631162288728,0,0,0.283550194484773,0,0,0.383382679165211,0.492663237895943,0.088048434013226,0.829312462163088,0.720599767084807,2.01987893482208,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0.560655421726804,0.43596006883328,0.07333828582095,0,0,0,0.797814349754612,0,0,2.83698264046557,0.532844358032199,0,0,0.823240336780769,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0,0.358121926479791,0.224170287987055,0.788123040807709,0,0.385029108839245,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0.783204629850962,1.71571711905428,0,0,0.106727557803444,2.12189300012382,0,0.30239029332968,0,0.306923946576125,0,0.128139149255701,0,0.482561763430822,0,0,0,0.0821271560138091,0,0.116210378459959,0.362578348774867,0.40101294060657,0.184161977871793,0,0,0.131124414959424,0.451199612907412,0,1.56869953835371,0,0.105551628892876,1.13733384070897,1.53084334748864,0,1.54227252690289,0.812839312631559,1.00337954770971,0.254876273045038,0,0.447749509444357,0.438519753291869,0,0,0.328014645699706,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.48335359146061,0.308097234229289,0.15350367472613,0.275673144969061,0,0.435050081742686,0.0852266274161009,0.445160178233687,0.495854746082934,0,0,0,0,0,0.6970372701606,0,1.59691809095107,0.869932992075073,0,0,0,0.632758849437452,0,0.255897791311334,0,0.636406495851874,0.78494864019923,0,0,0.471249609382746,0.202182481573316,1.58510321173008,0.421258456238981,0.48763373908959,0,2.11300293513511,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0,0,0.0982490410131212,0.7133421029625,0.354761064070598,0,0,0.75894634753143,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0.142283686696828,0.159426272728822,0.59873811429845,0.191505370132367,0.211673582723883,0.324621940274555,0,0.456469358066384,0.156679895773023,0,0,0.481764225311099,0,0,0.343505344755765,0.307240764308458,0,0,0.586164286206121,0,0,0,0,0,0,0,0,0.334330152832435,0,0.23874448473769,0.296964680832639,0.3071607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| ||
|short_description=p@chr11:74109574..74109604,+ | |||
}} | }} |
Latest revision as of 02:28, 24 July 2015
Short description: | p@chr11:74109574..74109604, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:74109574..74109604, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.62e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.62e-50 | 42 |
defensive cell | 7.80e-43 | 48 |
phagocyte | 7.80e-43 | 48 |
monopoietic cell | 9.95e-33 | 59 |
monocyte | 9.95e-33 | 59 |
monoblast | 9.95e-33 | 59 |
promonocyte | 9.95e-33 | 59 |
macrophage dendritic cell progenitor | 1.99e-31 | 61 |
myeloid lineage restricted progenitor cell | 6.58e-31 | 66 |
granulocyte monocyte progenitor cell | 2.45e-30 | 67 |
myeloid leukocyte | 1.01e-27 | 72 |
myeloid cell | 2.42e-17 | 108 |
common myeloid progenitor | 2.42e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 4.30e-16 | 120 |
nongranular leukocyte | 9.23e-16 | 115 |
leukocyte | 2.11e-14 | 136 |
hematopoietic cell | 9.03e-13 | 177 |
hematopoietic stem cell | 4.85e-11 | 168 |
hematopoietic oligopotent progenitor cell | 6.13e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.13e-11 | 161 |
glomerular cell | 4.97e-10 | 7 |
kidney corpuscule cell | 4.97e-10 | 7 |
glomerular endothelial cell | 1.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.59e-28 | 76 |
bone element | 1.88e-25 | 82 |
hematopoietic system | 1.78e-23 | 98 |
blood island | 1.78e-23 | 98 |
immune system | 2.12e-23 | 93 |
skeletal element | 1.63e-22 | 90 |
hemolymphoid system | 1.50e-20 | 108 |
skeletal system | 1.68e-19 | 100 |
lateral plate mesoderm | 4.16e-19 | 203 |
musculoskeletal system | 2.50e-12 | 167 |
mesoderm | 1.26e-10 | 315 |
mesoderm-derived structure | 1.26e-10 | 315 |
presumptive mesoderm | 1.26e-10 | 315 |
primitive nephron | 4.97e-10 | 7 |
renal glomerulus | 4.97e-10 | 7 |
renal corpuscle | 4.97e-10 | 7 |
glomerular capsule | 4.97e-10 | 7 |
metanephric mesenchyme | 4.97e-10 | 7 |
glomerular tuft | 4.97e-10 | 7 |
S-shaped body | 4.97e-10 | 7 |
renal vesicle | 4.97e-10 | 7 |
comma-shaped body | 4.97e-10 | 7 |
mesonephric epithelium | 9.67e-09 | 8 |
mesonephric tubule | 9.67e-09 | 8 |
nephric duct | 9.67e-09 | 8 |
renal duct | 9.67e-09 | 8 |
mesonephric duct | 9.67e-09 | 8 |
pronephric duct | 9.67e-09 | 8 |
mesonephros | 9.75e-08 | 9 |
pronephros | 9.75e-08 | 9 |
nephrogenic cord | 9.75e-08 | 9 |
pronephric mesoderm | 9.75e-08 | 9 |
rostral part of nephrogenic cord | 9.75e-08 | 9 |
presumptive pronephric mesoderm | 9.75e-08 | 9 |