FFCP PHASE1:Hg19::chr2:24307250..24307332,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9540 | |EntrezGene=9540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19373 | |HGNC=19373 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_ENST00000417886_5end | |association_with_transcript=48bp_to_ENST00000417886_5end | ||
|cluster_id=chr2:24307250..24307332,- | |||
|description=CAGE_peak_4_at_TP53I3_5end | |description=CAGE_peak_4_at_TP53I3_5end | ||
|id=chr2:24307250..24307332,- | |id=chr2:24307250..24307332,- | ||
|ontology_enrichment_celltype=CL:0000055!3.43e-34!180;CL:0000222!8.24e-27!119;CL:0000183!2.58e-18!59;CL:0000680!2.55e-16!57;CL:0000056!2.55e-16!57;CL:0000355!2.55e-16!57;CL:0000187!1.83e-15!54;CL:0000393!5.58e-15!60;CL:0000211!5.58e-15!60;CL:0000115!9.92e-15!35;CL:0000144!1.06e-14!625;CL:0002078!3.95e-14!44;CL:0000012!5.63e-14!682;CL:0000057!9.34e-14!75;CL:0002371!1.01e-13!591;CL:0000548!1.31e-13!679;CL:0000004!1.31e-13!679;CL:0000255!1.31e-13!679;CL:0002321!8.03e-13!248;CL:0000220!8.32e-13!246;CL:0000192!1.05e-12!42;CL:0000514!1.05e-12!42;CL:0002139!4.15e-12!24;CL:0000213!2.16e-10!57;CL:0000215!2.16e-10!57;CL:0000071!1.76e-09!18;CL:0002546!1.76e-09!18;CL:0000359!2.34e-09!32;CL:1000449!9.43e-08!16;CL:0000003!1.49e-07!722;CL:0002681!1.80e-07!13;CL:0002584!1.80e-07!13;CL:1000497!4.42e-07!18;CL:0002518!4.42e-07!18 | |ontology_enrichment_celltype=CL:0000055!3.43e-34!180;CL:0000222!8.24e-27!119;CL:0000183!2.58e-18!59;CL:0000680!2.55e-16!57;CL:0000056!2.55e-16!57;CL:0000355!2.55e-16!57;CL:0000187!1.83e-15!54;CL:0000393!5.58e-15!60;CL:0000211!5.58e-15!60;CL:0000115!9.92e-15!35;CL:0000144!1.06e-14!625;CL:0002078!3.95e-14!44;CL:0000012!5.63e-14!682;CL:0000057!9.34e-14!75;CL:0002371!1.01e-13!591;CL:0000548!1.31e-13!679;CL:0000004!1.31e-13!679;CL:0000255!1.31e-13!679;CL:0002321!8.03e-13!248;CL:0000220!8.32e-13!246;CL:0000192!1.05e-12!42;CL:0000514!1.05e-12!42;CL:0002139!4.15e-12!24;CL:0000213!2.16e-10!57;CL:0000215!2.16e-10!57;CL:0000071!1.76e-09!18;CL:0002546!1.76e-09!18;CL:0000359!2.34e-09!32;CL:1000449!9.43e-08!16;CL:0000003!1.49e-07!722;CL:0002681!1.80e-07!13;CL:0002584!1.80e-07!13;CL:1000497!4.42e-07!18;CL:0002518!4.42e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.41e-13;36!CL:0002139;6.74e-13;24!CL:0002078;2.05e-10;45!CL:0000071;4.63e-10;18!CL:0000192;1.60e-09;43!CL:0000187;2.17e-09;55!CL:0000359;7.25e-09;32!CL:0000393;1.30e-08;61!CL:0000211;1.30e-08;61!CL:0000213;1.44e-07;58!CL:0000215;1.44e-07;58!CL:1000449;2.02e-07;15!CL:0002681;3.26e-07;12!CL:0002584;3.26e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.99e-28,121;CL:0000680,1.31e-17,58;CL:0000056,1.31e-17,58;CL:0000355,1.31e-17,58;CL:0000187,1.05e-16,55;CL:0000393,3.52e-16,61;CL:0000211,3.52e-16,61;CL:0000115,7.94e-16,36;CL:0002078,5.19e-15,45;CL:0002321,4.56e-14,250;CL:0000192,8.65e-14,43;CL:0000514,8.65e-14,43;CL:0000057,1.36e-13,76;CL:0002139,1.12e-12,24;CL:0000213,1.16e-10,58;CL:0000215,1.16e-10,58;CL:0000071,6.56e-10,18;CL:0002546,6.56e-10,18;CL:0000359,8.87e-10,32;CL:1000449,1.37e-07,15;CL:0002681,2.73e-07,12;CL:0002584,2.73e-07,12;CL:0000048,3.09e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002546;4.63e-10;18!CL:0000355;7.34e-10;58!CL:0000514;1.60e-09;43!CL:0000222;1.97e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!8.18e-21!79;UBERON:0007798!8.18e-21!79;UBERON:0000914!1.27e-18!83;UBERON:0002329!1.27e-18!83;UBERON:0003077!1.27e-18!83;UBERON:0003059!1.27e-18!83;UBERON:0007282!1.27e-18!83;UBERON:0009618!1.27e-18!83;UBERON:0007285!1.27e-18!83;UBERON:0004290!3.40e-18!70;UBERON:0000055!1.92e-17!69;UBERON:0003914!7.07e-17!118;UBERON:0004872!9.04e-17!84;UBERON:0005256!1.19e-16!143;UBERON:0004535!1.63e-16!110;UBERON:0001009!6.56e-16!113;UBERON:0001134!2.01e-15!61;UBERON:0002036!2.01e-15!61;UBERON:0003082!2.01e-15!61;UBERON:0002385!1.23e-14!63;UBERON:0001015!1.23e-14!63;UBERON:0000383!1.23e-14!63;UBERON:0001981!1.52e-14!60;UBERON:0007500!1.52e-14!60;UBERON:0004537!1.52e-14!60;UBERON:0006965!1.52e-14!60;UBERON:0000490!3.82e-14!138;UBERON:0000486!9.77e-13!82;UBERON:0001637!2.37e-12!42;UBERON:0003509!2.37e-12!42;UBERON:0004572!2.37e-12!42;UBERON:0002100!2.65e-12!216;UBERON:0000926!1.75e-09!448;UBERON:0004120!1.75e-09!448;UBERON:0006603!1.75e-09!448;UBERON:0001986!1.76e-09!18;UBERON:0004638!1.76e-09!18;UBERON:0004852!1.76e-09!18;UBERON:0003104!3.49e-09!238;UBERON:0009142!3.49e-09!238;UBERON:0000487!5.86e-09!22;UBERON:0006914!1.27e-08!25;UBERON:0004573!1.31e-08!33;UBERON:0004571!1.31e-08!33;UBERON:0004211!9.43e-08!16;UBERON:0001285!9.43e-08!16;UBERON:0007684!9.43e-08!16;UBERON:0003220!9.43e-08!16;UBERON:0004208!9.43e-08!16;UBERON:0001225!1.80e-07!13;UBERON:0008987!1.80e-07!13;UBERON:0000119!2.89e-07!312;UBERON:0006555!4.14e-07!17;UBERON:0005103!4.14e-07!17;UBERON:0000083!4.14e-07!17;UBERON:0009201!4.14e-07!17;UBERON:0004819!4.14e-07!17;UBERON:0006553!4.14e-07!17;UBERON:0003074!4.14e-07!17;UBERON:0003060!4.14e-07!17;UBERON:0000483!5.38e-07!309;UBERON:0000947!8.45e-07!21;UBERON:0010191!8.45e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;2.23e-10;56!UBERON:0001981;2.23e-10;56!UBERON:0004537;2.23e-10;56!UBERON:0002049;4.17e-10;75!UBERON:0007798;4.17e-10;75!UBERON:0004638;4.63e-10;18!UBERON:0001986;4.63e-10;18!UBERON:0004852;4.63e-10;18!UBERON:0003914;6.72e-10;74!UBERON:0000055;1.31e-09;65!UBERON:0000487;3.73e-09;22!UBERON:0001637;8.95e-09;42!UBERON:0003509;8.95e-09;42!UBERON:0004572;8.95e-09;42!UBERON:0006914;1.42e-08;25!UBERON:0004573;1.07e-07;33!UBERON:0004571;1.07e-07;33!UBERON:0006555;2.02e-07;15!UBERON:0004819;2.02e-07;15!UBERON:0001285;2.02e-07;15!UBERON:0007684;2.02e-07;15!UBERON:0000353;3.21e-07;15!UBERON:0001225;3.26e-07;12!UBERON:0008987;3.26e-07;12 | |||
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| ||
|short_description=p4@TP53I3 | |short_description=p4@TP53I3 | ||
}} | }} |
Latest revision as of 12:29, 16 September 2015
Short description: | p4@TP53I3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TP53I3_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_ENST00000417886_5end |
EntrezGene: | TP53I3 |
HGNC: | 19373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.99e-28 | 121 |
muscle precursor cell | 1.31e-17 | 58 |
myoblast | 1.31e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-17 | 58 |
muscle cell | 1.05e-16 | 55 |
electrically responsive cell | 3.52e-16 | 61 |
electrically active cell | 3.52e-16 | 61 |
endothelial cell | 7.94e-16 | 36 |
meso-epithelial cell | 5.19e-15 | 45 |
embryonic cell | 4.56e-14 | 250 |
smooth muscle cell | 8.65e-14 | 43 |
smooth muscle myoblast | 8.65e-14 | 43 |
fibroblast | 1.36e-13 | 76 |
endothelial cell of vascular tree | 1.12e-12 | 24 |
lining cell | 1.16e-10 | 58 |
barrier cell | 1.16e-10 | 58 |
blood vessel endothelial cell | 6.56e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.56e-10 | 18 |
vascular associated smooth muscle cell | 8.87e-10 | 32 |
epithelial cell of nephron | 1.37e-07 | 15 |
kidney cortical cell | 2.73e-07 | 12 |
renal cortical epithelial cell | 2.73e-07 | 12 |
multi fate stem cell | 3.09e-07 | 427 |