FFCP PHASE1:Hg19::chr2:27632390..27632486,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5496 | |EntrezGene=5496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9278 | |HGNC=9278 | ||
|TSSclassifier=strong | |||
|UniProt=O15355 | |UniProt=O15355 | ||
|association_with_transcript=0bp_to_ENST00000350803,ENST00000472077,ENST00000484925_5end | |association_with_transcript=0bp_to_ENST00000350803,ENST00000472077,ENST00000484925_5end | ||
|cluster_id=chr2:27632390..27632486,- | |||
|description=CAGE_peak_1_at_PPM1G_5end | |description=CAGE_peak_1_at_PPM1G_5end | ||
|id=chr2:27632390..27632486,- | |id=chr2:27632390..27632486,- | ||
|ontology_enrichment_celltype=CL:0000066!9.88e-28!254;CL:0000548!2.46e-17!679;CL:0000004!2.46e-17!679;CL:0000255!2.46e-17!679;CL:0000012!5.64e-17!682;CL:0002321!8.23e-17!248;CL:0000220!3.08e-16!246;CL:0000003!1.87e-10!722;CL:0000076!9.63e-09!62;CL:0000115!3.99e-08!35;CL:0002078!5.69e-08!44;CL:1000449!2.92e-07!16;CL:0000222!3.54e-07!119;CL:0000071!3.71e-07!18;CL:0002546!3.71e-07!18;CL:0002139!6.39e-07!24 | |ontology_enrichment_celltype=CL:0000066!9.88e-28!254;CL:0000548!2.46e-17!679;CL:0000004!2.46e-17!679;CL:0000255!2.46e-17!679;CL:0000012!5.64e-17!682;CL:0002321!8.23e-17!248;CL:0000220!3.08e-16!246;CL:0000003!1.87e-10!722;CL:0000076!9.63e-09!62;CL:0000115!3.99e-08!35;CL:0002078!5.69e-08!44;CL:1000449!2.92e-07!16;CL:0000222!3.54e-07!119;CL:0000071!3.71e-07!18;CL:0002546!3.71e-07!18;CL:0002139!6.39e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:1000449;7.09e-08;15!CL:0000115;2.09e-07;36!CL:0000071;3.68e-07;18!CL:0002139;6.32e-07;24!CL:0002681;9.83e-07;12!CL:0002584;9.83e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.13e-28,253;CL:0002321,4.56e-17,250;CL:0000115,1.26e-08,36;CL:0002078,1.95e-08,45;CL:0000076,2.03e-08,63;CL:1000449,7.01e-08,15;CL:0000222,2.29e-07,121;CL:0000071,3.71e-07,18;CL:0002546,3.71e-07,18;CL:0002139,6.39e-07,24;CL:0000213,7.87e-07,58;CL:0000215,7.87e-07,58;CL:0002681,9.89e-07,12;CL:0002584,9.89e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;3.68e-07;18 | |||
|ontology_enrichment_disease=DOID:162!4.54e-25!235;DOID:14566!1.18e-24!239;DOID:0050687!6.16e-14!143;DOID:305!8.01e-14!106;DOID:0050686!7.60e-13!137;DOID:2531!6.48e-12!51;DOID:0060083!6.48e-12!51;DOID:1240!2.79e-09!39;DOID:8692!4.77e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;6.40e-08;51!DOID:0060083;6.40e-08;51!DOID:1240;1.35e-07;39!DOID:8692;6.14e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.54e-25,235;DOID:14566,1.18e-24,239;DOID:0050687,6.16e-14,143;DOID:305,8.01e-14,106;DOID:0050686,7.60e-13,137;DOID:2531,6.48e-12,51;DOID:0060083,6.48e-12,51;DOID:1240,2.79e-09,39;DOID:8692,4.77e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!6.12e-10!238;UBERON:0009142!6.12e-10!238;UBERON:0003914!2.52e-08!118;UBERON:0005177!4.29e-08!107;UBERON:0001048!9.83e-08!168;UBERON:0000487!1.20e-07!22;UBERON:0000072!1.42e-07!46;UBERON:0008947!2.87e-07!38;UBERON:0003258!2.87e-07!38;UBERON:0004211!2.92e-07!16;UBERON:0001285!2.92e-07!16;UBERON:0007684!2.92e-07!16;UBERON:0003220!2.92e-07!16;UBERON:0004208!2.92e-07!16;UBERON:0002100!3.18e-07!216;UBERON:0000466!3.40e-07!126;UBERON:0001986!3.71e-07!18;UBERON:0004638!3.71e-07!18;UBERON:0004852!3.71e-07!18;UBERON:0009569!4.73e-07!113;UBERON:0000464!8.19e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.09e-08;15!UBERON:0004819;7.09e-08;15!UBERON:0001285;7.09e-08;15!UBERON:0007684;7.09e-08;15!UBERON:0000490;9.05e-08;33!UBERON:0000487;1.20e-07;22!UBERON:0000072;2.03e-07;37!UBERON:0004638;3.68e-07;18!UBERON:0001986;3.68e-07;18!UBERON:0004852;3.68e-07;18!UBERON:0000353;3.85e-07;15!UBERON:0001225;9.83e-07;12!UBERON:0008987;9.83e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.06e-09,101;UBERON:0003914,1.79e-08,117;UBERON:0002100,1.86e-08,199;UBERON:0004211,7.01e-08,15;UBERON:0009773,7.01e-08,15;UBERON:0001231,7.01e-08,15;UBERON:0001285,7.01e-08,15;UBERON:0007684,7.01e-08,15;UBERON:0004208,7.01e-08,15;UBERON:0000487,1.20e-07,22;UBERON:0000072,2.59e-07,47;UBERON:0008947,2.87e-07,38;UBERON:0003258,2.87e-07,38;UBERON:0000490,2.99e-07,148;UBERON:0009569,3.02e-07,112;UBERON:0004638,3.71e-07,18;UBERON:0001986,3.71e-07,18;UBERON:0004852,3.71e-07,18;UBERON:0000353,3.74e-07,15;UBERON:0006555,5.73e-07,16;UBERON:0004819,5.73e-07,16;UBERON:0001225,9.89e-07,12;UBERON:0008987,9.89e-07,12 | |||
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29022615,93.1897664326451,120.533753106016 | ||
|short_description=p1@PPM1G | |short_description=p1@PPM1G | ||
}} | }} |
Latest revision as of 17:25, 16 September 2015
Short description: | p1@PPM1G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPM1G_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000350803, ENST00000472077, ENST00000484925_5end |
EntrezGene: | PPM1G |
HGNC: | 9278 |
UniProt: | O15355 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.13e-28 | 253 |
embryonic cell | 4.56e-17 | 250 |
endothelial cell | 1.26e-08 | 36 |
meso-epithelial cell | 1.95e-08 | 45 |
squamous epithelial cell | 2.03e-08 | 63 |
epithelial cell of nephron | 7.01e-08 | 15 |
mesodermal cell | 2.29e-07 | 121 |
blood vessel endothelial cell | 3.71e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.71e-07 | 18 |
endothelial cell of vascular tree | 6.39e-07 | 24 |
lining cell | 7.87e-07 | 58 |
barrier cell | 7.87e-07 | 58 |
kidney cortical cell | 9.89e-07 | 12 |
renal cortical epithelial cell | 9.89e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 3.06e-09 | 101 |
epithelial tube | 1.79e-08 | 117 |
trunk | 1.86e-08 | 199 |
nephron epithelium | 7.01e-08 | 15 |
renal tubule | 7.01e-08 | 15 |
nephron tubule | 7.01e-08 | 15 |
nephron | 7.01e-08 | 15 |
uriniferous tubule | 7.01e-08 | 15 |
nephrogenic mesenchyme | 7.01e-08 | 15 |
simple squamous epithelium | 1.20e-07 | 22 |
segment of respiratory tract | 2.59e-07 | 47 |
respiratory primordium | 2.87e-07 | 38 |
endoderm of foregut | 2.87e-07 | 38 |
unilaminar epithelium | 2.99e-07 | 148 |
subdivision of trunk | 3.02e-07 | 112 |
blood vessel endothelium | 3.71e-07 | 18 |
endothelium | 3.71e-07 | 18 |
cardiovascular system endothelium | 3.71e-07 | 18 |
parenchyma | 3.74e-07 | 15 |
excretory tube | 5.73e-07 | 16 |
kidney epithelium | 5.73e-07 | 16 |
cortex of kidney | 9.89e-07 | 12 |
renal parenchyma | 9.89e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.54e-25 | 235 |
disease of cellular proliferation | 1.18e-24 | 239 |
cell type cancer | 6.16e-14 | 143 |
carcinoma | 8.01e-14 | 106 |
organ system cancer | 7.60e-13 | 137 |
hematologic cancer | 6.48e-12 | 51 |
immune system cancer | 6.48e-12 | 51 |
leukemia | 2.79e-09 | 39 |
myeloid leukemia | 4.77e-07 | 31 |