FFCP PHASE1:Hg19::chr12:20171393..20171395,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:20171393..20171395,+
|short_description=p@chr12:20171393..20171395,+
|description=CAGE_peak_at_chr12:20171393..20171395,+
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:20171393..20171395,+ | |||
|description=CAGE_peak_at_chr12:20171393..20171395,+ | |||
|id=chr12:20171393..20171395,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.07e-15;1!CL:0000159;1.67e-08;2!CL:0002253;1.67e-08;2!CL:1000415;1.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,7.46e-16,1;CL:0000159,1.39e-08,2;CL:1000415,1.50e-08,2;CL:0002253,1.61e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.25e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;1.07e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,7.46e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002619!5.30e-24!22;UBERON:0002020!3.68e-23!34;UBERON:0003528!3.68e-23!34;UBERON:0001869!1.17e-22!32;UBERON:0001893!5.92e-21!34;UBERON:0001950!6.19e-21!20;UBERON:0000956!1.49e-20!25;UBERON:0000203!1.49e-20!25;UBERON:0002780!5.97e-20!41;UBERON:0001890!5.97e-20!41;UBERON:0006240!5.97e-20!41;UBERON:0002791!8.28e-20!33;UBERON:0007023!1.50e-19!115;UBERON:0001049!1.62e-19!57;UBERON:0005068!1.62e-19!57;UBERON:0006241!1.62e-19!57;UBERON:0007135!1.62e-19!57;UBERON:0003080!2.62e-19!42;UBERON:0002616!1.46e-18!59;UBERON:0000955!1.13e-16!69;UBERON:0006238!1.13e-16!69;UBERON:0002346!1.89e-16!90;UBERON:0001017!7.37e-15!82;UBERON:0005743!1.10e-14!86;UBERON:0003075!5.23e-14!86;UBERON:0007284!5.23e-14!86;UBERON:0000073!1.70e-13!94;UBERON:0001016!1.70e-13!94;UBERON:0003056!3.77e-12!61;UBERON:0001871!6.88e-11!7;UBERON:0000200!7.08e-11!6;UBERON:0000033!5.07e-07!123;UBERON:0000025!5.22e-07!194;UBERON:0002294!5.49e-07!7;UBERON:0001173!5.49e-07!7;UBERON:0004912!5.49e-07!7;UBERON:0000153!5.51e-07!129;UBERON:0007811!5.51e-07!129;UBERON:0000924!6.23e-07!173;UBERON:0006601!6.23e-07!173;UBERON:0000064!8.72e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;8.06e-29;2!UBERON:0001870;1.39e-19;3!UBERON:0002294;5.40e-19;7!UBERON:0001173;5.40e-19;7!UBERON:0002619;2.38e-15;22!UBERON:0001282;2.56e-15;1!UBERON:0009842;2.56e-15;1!UBERON:0003704;2.56e-15;1!UBERON:0001171;2.56e-15;1!UBERON:0001172;2.56e-15;1!UBERON:0002394;2.96e-15;4!UBERON:0003928;2.96e-15;4!UBERON:0000956;1.39e-13;25!UBERON:0000203;1.39e-13;25!UBERON:0001950;4.38e-11;20!UBERON:0000200;2.77e-10;6!UBERON:0002791;2.79e-10;32!UBERON:0001869;3.46e-10;32!UBERON:0003528;1.71e-09;34!UBERON:0002020;1.71e-09;34!UBERON:0001893;8.56e-09;34!UBERON:0001954;2.57e-08;2!UBERON:0003022;2.57e-08;2!UBERON:0002421;2.57e-08;2!UBERON:0002600;2.57e-08;2!UBERON:0002780;8.67e-07;41!UBERON:0001890;8.67e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,9.30e-29,2;UBERON:0001870,1.53e-19,3;UBERON:0001282,1.78e-15,1;UBERON:0009842,1.78e-15,1;UBERON:0003704,1.78e-15,1;UBERON:0001171,1.78e-15,1;UBERON:0001172,1.78e-15,1;UBERON:0002619,2.65e-15,22;UBERON:0002294,5.40e-15,9;UBERON:0001173,5.40e-15,9;UBERON:0004912,5.40e-15,9;UBERON:0000956,1.53e-13,25;UBERON:0000203,1.53e-13,25;UBERON:0001950,4.87e-11,20;UBERON:0002791,1.14e-10,32;UBERON:0001869,1.14e-10,32;UBERON:0002394,1.57e-10,6;UBERON:0003928,1.57e-10,6;UBERON:0000200,2.90e-10,6;UBERON:0003528,4.63e-10,34;UBERON:0002020,4.63e-10,34;UBERON:0001893,4.63e-10,34;UBERON:0002780,2.23e-08,41;UBERON:0001890,2.23e-08,41;UBERON:0003080,2.23e-08,41;UBERON:0006240,2.23e-08,41;UBERON:0001954,2.48e-08,2;UBERON:0003022,2.48e-08,2;UBERON:0002421,2.48e-08,2;UBERON:0002600,2.48e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0.422008249231538,0,0,0,10.5601433773067,0,0,0,0,0,0,10.2042069565097,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.689486746482929,0.874813840149763,0,0,0,0,0,0.591095237907095,0,0.21787692703798,0,0.0769502585037971,1.82307289355202,0.23056390438806,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,2.81305231664718,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0,0,0,0,0,2.41981432097328,0.91821828489147,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0.328461828212837,0,0,0.451961481561065,0,0.397429223405979,0.569797163602908,2.93327074102205,0.480952921509202,0.213452994739353,0,0,0,0,1.58460277786965,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.916641696046735,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.272406812223151,0,0,0,0.2249738915515,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0.35857467866569,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,1.77213635993397,0.366078794705889,1.1267183763585,0.573409195690071,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,2.94927490504463,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,0,2.33832412111851,0.619678821295011,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0.756215088665154,0,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.0634158101939068,2.18789923607288,0,0,0.527613733078862,0,0,0.336283722218824,0,0,0.177404740325278,0,0,0.543757863814654,0.197318320688547,0,0,0,0.628462359664008,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0.535928260312357,0.829169439458779,0,0,0.952257725854961,0,0,0,0,0.808468755832877,0,0,0,0,0.665320713092027,0,0.640364075266293,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0.422008249231538,0,0,0,10.5601433773067,0,0,0,0,0,0,10.2042069565097,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.689486746482929,0.874813840149763,0,0,0,0,0,0.591095237907095,0,0.21787692703798,0,0.0769502585037971,1.82307289355202,0.23056390438806,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,2.81305231664718,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0,0,0,0,0,2.41981432097328,0.91821828489147,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0.328461828212837,0,0,0.451961481561065,0,0.397429223405979,0.569797163602908,2.93327074102205,0.480952921509202,0.213452994739353,0,0,0,0,1.58460277786965,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.916641696046735,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.272406812223151,0,0,0,0.2249738915515,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0.35857467866569,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,1.77213635993397,0.366078794705889,1.1267183763585,0.573409195690071,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,2.94927490504463,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,0,2.33832412111851,0.619678821295011,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0.756215088665154,0,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.0634158101939068,2.18789923607288,0,0,0.527613733078862,0,0,0.336283722218824,0,0,0.177404740325278,0,0,0.543757863814654,0.197318320688547,0,0,0,0.628462359664008,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0.535928260312357,0.829169439458779,0,0,0.952257725854961,0,0,0,0,0.808468755832877,0,0,0,0,0.665320713092027,0,0.640364075266293,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr12:20171393..20171395,+ | |||
}} | }} |
Latest revision as of 07:25, 24 July 2015
Short description: | p@chr12:20171393..20171395, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:20171393..20171395, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 7.46e-16 | 1 |
seromucus secreting cell | 1.39e-08 | 2 |
epithelial cell of gall bladder | 1.50e-08 | 2 |
epithelial cell of large intestine | 1.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 9.30e-29 | 2 |
frontal cortex | 1.53e-19 | 3 |
intralobular bile duct | 1.78e-15 | 1 |
acinus | 1.78e-15 | 1 |
intrahepatic bile duct | 1.78e-15 | 1 |
portal lobule | 1.78e-15 | 1 |
hepatic acinus | 1.78e-15 | 1 |
regional part of cerebral cortex | 2.65e-15 | 22 |
biliary system | 5.40e-15 | 9 |
biliary tree | 5.40e-15 | 9 |
biliary bud | 5.40e-15 | 9 |
cerebral cortex | 1.53e-13 | 25 |
pallium | 1.53e-13 | 25 |
neocortex | 4.87e-11 | 20 |
regional part of telencephalon | 1.14e-10 | 32 |
cerebral hemisphere | 1.14e-10 | 32 |
bile duct | 1.57e-10 | 6 |
digestive system duct | 1.57e-10 | 6 |
gyrus | 2.90e-10 | 6 |
brain grey matter | 4.63e-10 | 34 |
gray matter | 4.63e-10 | 34 |
telencephalon | 4.63e-10 | 34 |
regional part of forebrain | 2.23e-08 | 41 |
forebrain | 2.23e-08 | 41 |
anterior neural tube | 2.23e-08 | 41 |
future forebrain | 2.23e-08 | 41 |
Ammon's horn | 2.48e-08 | 2 |
lobe parts of cerebral cortex | 2.48e-08 | 2 |
hippocampal formation | 2.48e-08 | 2 |
limbic lobe | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.46e-16 | 1 |