FFCP PHASE1:Hg19::chr19:51628390..51628400,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27180 | |EntrezGene=27180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10878 | |HGNC=10878 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_DQ892476,DQ895688_5end | |association_with_transcript=86bp_to_DQ892476,DQ895688_5end | ||
|cluster_id=chr19:51628390..51628400,+ | |||
|coexpression_cluster_id=C847 | |||
|description=CAGE_peak_4_at_SIGLEC9_5end | |description=CAGE_peak_4_at_SIGLEC9_5end | ||
|id=chr19:51628390..51628400,+ | |id=chr19:51628390..51628400,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.31e-56!76;CL:0002194!1.85e-55!63;CL:0000576!1.85e-55!63;CL:0000040!1.85e-55!63;CL:0000559!1.85e-55!63;CL:0000839!6.46e-54!70;CL:0002009!2.14e-53!65;CL:0000557!5.50e-53!71;CL:0002057!1.48e-49!42;CL:0000860!1.33e-45!45;CL:0000763!3.06e-34!112;CL:0000049!3.06e-34!112;CL:0000738!1.69e-27!140;CL:0002087!1.11e-26!119;CL:0002031!4.00e-25!124;CL:0000037!6.21e-20!172;CL:0000566!6.21e-20!172;CL:0002032!3.89e-19!165;CL:0000837!3.89e-19!165;CL:0000988!3.97e-18!182;CL:0002619!2.11e-08!3;CL:0000767!9.97e-08!3 | |ontology_enrichment_celltype=CL:0000766!1.31e-56!76;CL:0002194!1.85e-55!63;CL:0000576!1.85e-55!63;CL:0000040!1.85e-55!63;CL:0000559!1.85e-55!63;CL:0000839!6.46e-54!70;CL:0002009!2.14e-53!65;CL:0000557!5.50e-53!71;CL:0002057!1.48e-49!42;CL:0000860!1.33e-45!45;CL:0000763!3.06e-34!112;CL:0000049!3.06e-34!112;CL:0000738!1.69e-27!140;CL:0002087!1.11e-26!119;CL:0002031!4.00e-25!124;CL:0000037!6.21e-20!172;CL:0000566!6.21e-20!172;CL:0002032!3.89e-19!165;CL:0000837!3.89e-19!165;CL:0000988!3.97e-18!182;CL:0002619!2.11e-08!3;CL:0000767!9.97e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-60;33!CL:0002057;1.46e-60;33!CL:0000473;2.55e-60;39!CL:0000234;2.55e-60;39!CL:0000576;1.10e-43;48!CL:0000766;2.13e-29;69!CL:0000235;5.18e-22;6!CL:0000763;1.39e-14;100!CL:0002619;1.77e-11;3!CL:0000738;4.55e-10;136!CL:0002087;5.31e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.58e-77,48;CL:0000234,3.58e-77,48;CL:0002194,5.29e-73,59;CL:0000576,5.29e-73,59;CL:0000040,5.29e-73,59;CL:0000559,5.29e-73,59;CL:0002009,1.54e-70,61;CL:0000839,5.12e-65,66;CL:0000557,5.20e-64,67;CL:0000766,2.17e-59,72;CL:0000860,2.45e-58,42;CL:0002057,2.45e-58,42;CL:0000763,1.30e-38,108;CL:0000049,1.30e-38,108;CL:0002087,4.59e-36,115;CL:0002031,2.00e-34,120;CL:0000738,5.55e-30,136;CL:0002032,8.64e-25,161;CL:0000837,8.64e-25,161;CL:0000037,1.31e-23,168;CL:0000988,3.15e-22,177;CL:0000235,3.76e-22,6;CL:0002619,2.44e-11,3;CL:0000134,3.25e-09,354;CL:0002320,5.85e-09,361;CL:0000219,4.68e-08,386;CL:0000048,6.00e-07,427;CL:0000723,8.54e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.73e-43;42!CL:0000049;5.20e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.25e-47!102;UBERON:0003061!7.25e-47!102;UBERON:0002371!1.18e-45!80;UBERON:0001474!1.29e-41!86;UBERON:0002193!1.94e-41!112;UBERON:0002405!2.79e-36!115;UBERON:0004765!1.29e-33!101;UBERON:0001434!1.29e-33!101;UBERON:0002204!1.17e-16!167;UBERON:0003081!6.66e-16!216;UBERON:0007023!9.98e-13!115;UBERON:0002298!1.02e-12!8;UBERON:0000062!5.79e-11!511;UBERON:0001049!9.62e-10!57;UBERON:0005068!9.62e-10!57;UBERON:0006241!9.62e-10!57;UBERON:0007135!9.62e-10!57;UBERON:0002420!3.09e-08!9;UBERON:0007245!3.09e-08!9;UBERON:0010009!3.09e-08!9;UBERON:0010011!3.09e-08!9;UBERON:0000454!3.09e-08!9;UBERON:0002308!3.27e-08!9;UBERON:0000125!3.27e-08!9;UBERON:0002616!3.31e-08!59;UBERON:0000923!5.46e-08!604;UBERON:0005291!5.46e-08!604;UBERON:0006598!5.46e-08!604;UBERON:0002532!5.46e-08!604;UBERON:0002050!6.06e-08!605;UBERON:0005423!6.06e-08!605;UBERON:0002791!9.14e-08!33;UBERON:0009663!9.55e-08!7;UBERON:0000922!1.24e-07!612;UBERON:0000467!1.33e-07!625;UBERON:0000480!1.47e-07!626;UBERON:0002020!1.76e-07!34;UBERON:0003528!1.76e-07!34;UBERON:0001893!1.82e-07!34;UBERON:0001896!2.67e-07!3;UBERON:0005290!2.67e-07!3;UBERON:0010096!2.67e-07!3;UBERON:0000955!3.80e-07!69;UBERON:0006238!3.80e-07!69;UBERON:0000349!4.49e-07!5;UBERON:0001017!7.29e-07!82;UBERON:0000468!9.70e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.12e-09;1!UBERON:0005208;3.12e-09;1!UBERON:0004145;3.12e-09;1!UBERON:0005946;3.12e-09;1!UBERON:0005965;3.12e-09;1!UBERON:0002078;3.12e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.00e-56,76;UBERON:0001474,8.17e-52,82;UBERON:0004765,5.97e-47,90;UBERON:0002405,2.44e-45,93;UBERON:0002390,7.17e-43,98;UBERON:0003061,7.17e-43,98;UBERON:0001434,5.96e-42,100;UBERON:0002193,1.30e-38,108;UBERON:0002204,9.00e-24,167;UBERON:0003081,7.95e-21,203;UBERON:0000926,4.41e-12,315;UBERON:0004120,4.41e-12,315;UBERON:0006603,4.41e-12,315;UBERON:0002134,2.55e-09,1;UBERON:0005208,2.55e-09,1;UBERON:0005946,2.55e-09,1;UBERON:0005965,2.55e-09,1;UBERON:0002078,2.55e-09,1;UBERON:0002384,1.31e-08,371 | |||
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| ||
|short_description=p4@SIGLEC9 | |short_description=p4@SIGLEC9 | ||
}} | }} |
Latest revision as of 14:15, 19 September 2015
Short description: | p4@SIGLEC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SIGLEC9_5end |
Coexpression cluster: | C847_Monocytederived_CD14_Macrophage_Dendritic_immature_adipose_lung |
Association with transcript: | 86bp_to_DQ892476, DQ895688_5end |
EntrezGene: | SIGLEC9 |
HGNC: | 10878 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.58e-77 | 48 |
phagocyte | 3.58e-77 | 48 |
monopoietic cell | 5.29e-73 | 59 |
monocyte | 5.29e-73 | 59 |
monoblast | 5.29e-73 | 59 |
promonocyte | 5.29e-73 | 59 |
macrophage dendritic cell progenitor | 1.54e-70 | 61 |
myeloid lineage restricted progenitor cell | 5.12e-65 | 66 |
granulocyte monocyte progenitor cell | 5.20e-64 | 67 |
myeloid leukocyte | 2.17e-59 | 72 |
classical monocyte | 2.45e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-58 | 42 |
myeloid cell | 1.30e-38 | 108 |
common myeloid progenitor | 1.30e-38 | 108 |
nongranular leukocyte | 4.59e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 2.00e-34 | 120 |
leukocyte | 5.55e-30 | 136 |
hematopoietic oligopotent progenitor cell | 8.64e-25 | 161 |
hematopoietic multipotent progenitor cell | 8.64e-25 | 161 |
hematopoietic stem cell | 1.31e-23 | 168 |
hematopoietic cell | 3.15e-22 | 177 |
macrophage | 3.76e-22 | 6 |
adult endothelial progenitor cell | 2.44e-11 | 3 |
mesenchymal cell | 3.25e-09 | 354 |
connective tissue cell | 5.85e-09 | 361 |
motile cell | 4.68e-08 | 386 |
multi fate stem cell | 6.00e-07 | 427 |
somatic stem cell | 8.54e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.00e-56 | 76 |
bone element | 8.17e-52 | 82 |
skeletal element | 5.97e-47 | 90 |
immune system | 2.44e-45 | 93 |
hematopoietic system | 7.17e-43 | 98 |
blood island | 7.17e-43 | 98 |
skeletal system | 5.96e-42 | 100 |
hemolymphoid system | 1.30e-38 | 108 |
musculoskeletal system | 9.00e-24 | 167 |
lateral plate mesoderm | 7.95e-21 | 203 |
mesoderm | 4.41e-12 | 315 |
mesoderm-derived structure | 4.41e-12 | 315 |
presumptive mesoderm | 4.41e-12 | 315 |
tricuspid valve | 2.55e-09 | 1 |
right atrium valve | 2.55e-09 | 1 |
outflow tract of atrium | 2.55e-09 | 1 |
outflow part of right atrium | 2.55e-09 | 1 |
right cardiac atrium | 2.55e-09 | 1 |
connective tissue | 1.31e-08 | 371 |