FFCP PHASE1:Hg19::chr19:54876447..54876469,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3903 | |EntrezGene=3903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6477 | |HGNC=6477 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000484116_5end | |association_with_transcript=0bp_to_ENST00000484116_5end | ||
|cluster_id=chr19:54876447..54876469,- | |||
|coexpression_cluster_id=C1105 | |||
|description=CAGE_peak_3_at_LAIR1_5end | |description=CAGE_peak_3_at_LAIR1_5end | ||
|id=chr19:54876447..54876469,- | |id=chr19:54876447..54876469,- | ||
|ontology_enrichment_celltype=CL:0000037!1.87e-71!172;CL:0000566!1.87e-71!172;CL:0002032!7.94e-67!165;CL:0000837!7.94e-67!165;CL:0000988!2.39e-66!182;CL:0000738!7.15e-61!140;CL:0002087!1.45e-54!119;CL:0002031!2.56e-54!124;CL:0000763!3.96e-45!112;CL:0000049!3.96e-45!112;CL:0000766!3.44e-40!76;CL:0000839!3.46e-37!70;CL:0000557!6.61e-36!71;CL:0002194!1.22e-33!63;CL:0000576!1.22e-33!63;CL:0000040!1.22e-33!63;CL:0000559!1.22e-33!63;CL:0002009!9.96e-32!65;CL:0002057!1.14e-31!42;CL:0000860!4.78e-28!45;CL:0000542!4.20e-18!53;CL:0000051!4.20e-18!53;CL:0000838!1.04e-17!52;CL:0000134!1.94e-11!358;CL:0000084!4.43e-11!25;CL:0000827!4.43e-11!25;CL:0002320!2.55e-10!365;CL:0000791!2.73e-09!18;CL:0000789!2.73e-09!18;CL:0002420!2.73e-09!18;CL:0002419!2.73e-09!18;CL:0000790!2.73e-09!18;CL:0000236!1.49e-08!14;CL:0002393!2.65e-08!9;CL:0002397!2.65e-08!9;CL:0000219!4.72e-07!390 | |ontology_enrichment_celltype=CL:0000037!1.87e-71!172;CL:0000566!1.87e-71!172;CL:0002032!7.94e-67!165;CL:0000837!7.94e-67!165;CL:0000988!2.39e-66!182;CL:0000738!7.15e-61!140;CL:0002087!1.45e-54!119;CL:0002031!2.56e-54!124;CL:0000763!3.96e-45!112;CL:0000049!3.96e-45!112;CL:0000766!3.44e-40!76;CL:0000839!3.46e-37!70;CL:0000557!6.61e-36!71;CL:0002194!1.22e-33!63;CL:0000576!1.22e-33!63;CL:0000040!1.22e-33!63;CL:0000559!1.22e-33!63;CL:0002009!9.96e-32!65;CL:0002057!1.14e-31!42;CL:0000860!4.78e-28!45;CL:0000542!4.20e-18!53;CL:0000051!4.20e-18!53;CL:0000838!1.04e-17!52;CL:0000134!1.94e-11!358;CL:0000084!4.43e-11!25;CL:0000827!4.43e-11!25;CL:0002320!2.55e-10!365;CL:0000791!2.73e-09!18;CL:0000789!2.73e-09!18;CL:0002420!2.73e-09!18;CL:0002419!2.73e-09!18;CL:0000790!2.73e-09!18;CL:0000236!1.49e-08!14;CL:0002393!2.65e-08!9;CL:0002397!2.65e-08!9;CL:0000219!4.72e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.95e-26;33!CL:0002057;2.95e-26;33!CL:0000473;1.09e-25;39!CL:0000234;1.09e-25;39!CL:0000576;1.24e-25;48!CL:0000766;4.38e-22;69!CL:0000763;4.74e-18;100!CL:0002087;2.00e-17;104!CL:0000738;5.29e-14;136!CL:0000988;2.72e-12;177!CL:0000542;1.14e-10;53!CL:0000791;1.46e-10;18!CL:0000789;1.46e-10;18!CL:0002419;1.46e-10;18!CL:0000084;1.75e-10;25!CL:0000236;4.24e-10;13!CL:0000625;1.41e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.95e-77,168;CL:0002032,5.91e-72,161;CL:0000837,5.91e-72,161;CL:0000988,1.60e-70,177;CL:0000738,5.78e-66,136;CL:0002087,7.20e-61,115;CL:0002031,5.21e-60,120;CL:0000763,4.85e-51,108;CL:0000049,4.85e-51,108;CL:0000766,7.23e-48,72;CL:0000839,1.63e-44,66;CL:0000557,3.93e-44,67;CL:0000473,2.23e-41,48;CL:0000234,2.23e-41,48;CL:0002194,2.53e-41,59;CL:0000576,2.53e-41,59;CL:0000040,2.53e-41,59;CL:0000559,2.53e-41,59;CL:0002009,3.63e-39,61;CL:0000860,7.95e-37,42;CL:0002057,7.95e-37,42;CL:0000542,1.72e-17,53;CL:0000051,1.72e-17,53;CL:0000838,4.83e-17,52;CL:0000134,2.41e-14,354;CL:0002320,2.97e-13,361;CL:0000791,1.31e-10,18;CL:0000789,1.31e-10,18;CL:0002420,1.31e-10,18;CL:0002419,1.31e-10,18;CL:0000790,1.31e-10,18;CL:0000084,1.56e-10,25;CL:0000827,1.56e-10,25;CL:0000219,1.39e-09,386;CL:0002393,1.88e-09,9;CL:0002397,1.88e-09,9;CL:0000236,4.73e-09,14;CL:0000625,1.36e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.97e-26;42!CL:0000049;5.48e-15;108!CL:0000051;1.14e-10;53!CL:0000790;1.46e-10;18 | |||
|ontology_enrichment_disease=DOID:1240!2.04e-11!39;DOID:2531!4.29e-10!51;DOID:0060083!4.29e-10!51;DOID:8692!8.16e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.67e-09;31!DOID:1240;2.59e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.02e-12,39;DOID:8692,5.72e-10,31;DOID:2531,5.45e-09,51;DOID:0060083,5.45e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.39e-42!102;UBERON:0003061!8.39e-42!102;UBERON:0002193!9.05e-37!112;UBERON:0002371!8.60e-32!80;UBERON:0001474!2.30e-28!86;UBERON:0002405!1.28e-24!115;UBERON:0007023!7.95e-22!115;UBERON:0004765!2.02e-20!101;UBERON:0001434!2.02e-20!101;UBERON:0002384!1.26e-09!375;UBERON:0000178!4.85e-08!15;UBERON:0000179!4.85e-08!15;UBERON:0000463!4.85e-08!15;UBERON:0001049!7.99e-08!57;UBERON:0005068!7.99e-08!57;UBERON:0006241!7.99e-08!57;UBERON:0007135!7.99e-08!57;UBERON:0003081!1.39e-07!216;UBERON:0003080!6.73e-07!42 | |ontology_enrichment_uberon=UBERON:0002390!8.39e-42!102;UBERON:0003061!8.39e-42!102;UBERON:0002193!9.05e-37!112;UBERON:0002371!8.60e-32!80;UBERON:0001474!2.30e-28!86;UBERON:0002405!1.28e-24!115;UBERON:0007023!7.95e-22!115;UBERON:0004765!2.02e-20!101;UBERON:0001434!2.02e-20!101;UBERON:0002384!1.26e-09!375;UBERON:0000178!4.85e-08!15;UBERON:0000179!4.85e-08!15;UBERON:0000463!4.85e-08!15;UBERON:0001049!7.99e-08!57;UBERON:0005068!7.99e-08!57;UBERON:0006241!7.99e-08!57;UBERON:0007135!7.99e-08!57;UBERON:0003081!1.39e-07!216;UBERON:0003080!6.73e-07!42 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.83e-48,98;UBERON:0003061,5.83e-48,98;UBERON:0002193,6.72e-43,108;UBERON:0002371,8.38e-39,76;UBERON:0002405,9.84e-37,93;UBERON:0001474,4.58e-35,82;UBERON:0004765,1.47e-29,90;UBERON:0001434,8.66e-25,100;UBERON:0007023,1.22e-14,114;UBERON:0002384,3.55e-12,371;UBERON:0003081,1.28e-11,203;UBERON:0002204,1.51e-07,167;UBERON:0001049,3.74e-07,56;UBERON:0005068,3.74e-07,56;UBERON:0006241,3.74e-07,56;UBERON:0007135,3.74e-07,56 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,2.9801228241701,2.05251473624864,2.04648031415566,25.9620422720277,7.29275856384704,17.9586703046648,0,0,0,0,0,21.139231632109,17.7278530730201,28.4773115407601,12.3696196308036,26.645941434551,28.1787489436512,26.272707898687,25.0084970700851,41.9442297494578,44.878051319746,38.5832201263436,39.4721172500953,24.4668033007132,15.247696793074,17.6750887505079,18.4456139313096,34.4745680736619,23.2374486090177,25.7310324529249,27.1068968941351,24.5615535052061,25.6184772267396,56.0133523038752,50.0649282238706,50.5076329381243,15.1731598085889,20.7442203926497,25.5734850319616,61.8145678278884,41.9865066271443,48.5801354216549,11.3061899365534,13.037072960505,12.5969529928968,33.2969726448353,33.1449872388808,27.5322277073569,51.9688004327377,44.2216943927291,35.4323110909155,16.9616233031208,18.3215809266638,16.072558669708,36.1966184551386,48.7345859137771,46.9446875175109,35.1992488922645,39.8681186221356,32.9118423929515,26.4572737991234,50.0494983795016,40.8074232367683,52.883589822789,44.8405264631621,26.1837965790346,11.7447437874188,14.5263826687587,17.1822727152734,8.40762844472304,15.2762769169545,5.31116379307349,4.71612915298998,4.72883447698871,23.907668840867,10.4295125322749,12.7830907548378,17.534405556712,22.3935018339199,6.77593587192126,6.64601683750863,7.58250818542044,25.7463552648607,28.0928190729337,29.9276986378691,32.0566020631584,35.0661733739414,13.9389369372337,12.3068780921268,7.31748666634838,22.5485591968157,4.21542542962113,4.46715679127419,6.57851199250707,12.4240511586398,12.370585623272,15.207232711174,8.88393202558859,10.8788619481256,14.9916871862815,14.680189626729,10.6746639599736,9.27391018833769,4.01160293675261,6.95157138637435,0,0,0,0,0,0,0,0,0,0,0.175669571386252,1.70272798147026,0,0,0.649094787309367,0.174129737299267,1.99436940778298,9.06264372360299,6.86393892936153,8.91498003190956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,7.50487269004906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.1141346209145,9.59417487070874,18.578895286091,0,0,0,0,0,0,4.43396914106349,33.0181627549598,31.9285297932789,36.1741083076573,32.570547824006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1897073538857,23.1038262058778,14.7583757638122,0,0,0,0,0,0,6.72510863961164,14.5802762549426,11.2126338926949,16.4279086438078,0,0,0,0.670065061337395,0,0.749007023947182,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8872978808479,18.7671354712197,12.2736691473961,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.261435451024901,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,12.1787426215721,15.2927441428475,17.0894156152249,14.7703700783829,20.1567513812235,14.2664128462398,19.9811631778102,11.8968776444141,0,0.962479855263359,0,6.13150477914872,4.61661481524624,11.7384041524883,7.97131363644112,9.97896857164083,13.0223651690009,49.9549655228364,38.6300108926721,15.1630476181268,8.6729178032613,18.8015874927628,5.01268954180134,8.97246422348497,9.63528450622197,17.7583742328122,22.144004359897,15.1142351692536,6.45205605047762,5.36822658941798,7.50821137703588,18.3664809677918,0,0,6.22048060494761,5.66222345596294,7.04935025439248,0,3.36968812325356,0,0.222886768554957,0,0,0.296964680832639,0,1.9882952955326,2.39138007897872,0,8.5698014597915,0,1.19548792950642,6.07824614168525,0,0,0,0,0,0,19.951322438848,1.1837208676432,14.3689855408164,0,3.87733098438087,2.69027484669369,3.99227596002388,0,0,1.44999915086959,0,0,0,0,0.583209226766509,0,3.54296554325536,2.89431452700979,0,0.221158519862449,0.886642856860642,0.658156191461918,0,0,1.23120413606075,1.02547850262301,0,0,0,0,0.183195186803725,0.533034776018635,28.6141234948062,13.9712428191572,3.32423363800313,0,0,0,0,5.08597052737212,0,0,0,0,0,3.00755719311353,1.83309043480088,0.593042257361244,0.741383633679017,0.522109747527277,6.20090423422229,3.21031058919516,3.74823113160543,0,0,0,0.789168805698781,3.62972148145992,1.53036380815245,5.30767268879299,0,0,0,0,0,0,0,0,0,0,0,3.14508002835654,0,0,0,0,0.969890164884194,0,0,0,0,1.13959432720582,0,0.0801588202515337,4.0556069000477,0,0,0,0,0,0,0,0,0,0.101998217636322,0,4.20294202096853,3.83335060897581,20.4394540907156,0,0.525774708558629,1.11712960508902,0.687481272035051,0,0,0.858452096273142,0.89268582976749,0.806201669840715,0,0,0.630265458457789,0.412079291905832,0.404421263125109,0,0.169346664131569,2.38568906942791,3.40508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| ||
|short_description=p3@LAIR1 | |short_description=p3@LAIR1 | ||
}} | }} |
Latest revision as of 22:07, 19 September 2015
Short description: | p3@LAIR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAIR1_5end |
Coexpression cluster: | C1105_CD14_CD19_acute_CD14CD16_CD4_Mast_granulocyte |
Association with transcript: | 0bp_to_ENST00000484116_5end |
EntrezGene: | LAIR1 |
HGNC: | 6477 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.83e-48 | 98 |
blood island | 5.83e-48 | 98 |
hemolymphoid system | 6.72e-43 | 108 |
bone marrow | 8.38e-39 | 76 |
immune system | 9.84e-37 | 93 |
bone element | 4.58e-35 | 82 |
skeletal element | 1.47e-29 | 90 |
skeletal system | 8.66e-25 | 100 |
adult organism | 1.22e-14 | 114 |
connective tissue | 3.55e-12 | 371 |
lateral plate mesoderm | 1.28e-11 | 203 |
musculoskeletal system | 1.51e-07 | 167 |
neural tube | 3.74e-07 | 56 |
neural rod | 3.74e-07 | 56 |
future spinal cord | 3.74e-07 | 56 |
neural keel | 3.74e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.02e-12 | 39 |
myeloid leukemia | 5.72e-10 | 31 |
hematologic cancer | 5.45e-09 | 51 |
immune system cancer | 5.45e-09 | 51 |