FFCP PHASE1:Hg19::chr6:114181120..114181192,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:114181120..114181192,+ | |||
|coexpression_cluster_id=C1258 | |||
|description=CAGE_peak_at_chr6:114181120..114181192,+ | |description=CAGE_peak_at_chr6:114181120..114181192,+ | ||
|id=chr6:114181120..114181192,+ | |id=chr6:114181120..114181192,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.08e-13!42;CL:0002371!2.03e-12!591;CL:0000144!2.79e-12!625;CL:0000548!1.05e-10!679;CL:0000004!1.05e-10!679;CL:0000255!1.05e-10!679;CL:0000860!3.11e-10!45;CL:0000012!4.56e-10!682;CL:0000055!8.22e-09!180;CL:0000057!3.27e-08!75;CL:0002009!5.11e-08!65;CL:0000766!6.58e-08!76;CL:0002194!1.06e-07!63;CL:0000576!1.06e-07!63;CL:0000040!1.06e-07!63;CL:0000559!1.06e-07!63;CL:0000723!1.07e-07!436;CL:0000048!1.20e-07!430;CL:0000034!3.47e-07!444 | |ontology_enrichment_celltype=CL:0002057!9.08e-13!42;CL:0002371!2.03e-12!591;CL:0000144!2.79e-12!625;CL:0000548!1.05e-10!679;CL:0000004!1.05e-10!679;CL:0000255!1.05e-10!679;CL:0000860!3.11e-10!45;CL:0000012!4.56e-10!682;CL:0000055!8.22e-09!180;CL:0000057!3.27e-08!75;CL:0002009!5.11e-08!65;CL:0000766!6.58e-08!76;CL:0002194!1.06e-07!63;CL:0000576!1.06e-07!63;CL:0000040!1.06e-07!63;CL:0000559!1.06e-07!63;CL:0000723!1.07e-07!436;CL:0000048!1.20e-07!430;CL:0000034!3.47e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.86e-14;33!CL:0002057;3.86e-14;33!CL:0000473;8.77e-13;39!CL:0000234;8.77e-13;39!CL:0000576;1.99e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.02e-14,48;CL:0000234,1.02e-14,48;CL:0000860,7.69e-13,42;CL:0002057,7.69e-13,42;CL:0000723,4.08e-11,433;CL:0000048,4.21e-11,427;CL:0002009,6.08e-11,61;CL:0002194,1.47e-10,59;CL:0000576,1.47e-10,59;CL:0000040,1.47e-10,59;CL:0000559,1.47e-10,59;CL:0000766,2.15e-10,72;CL:0000034,3.98e-10,441;CL:0000557,5.79e-09,67;CL:0000219,8.85e-09,386;CL:0000134,2.49e-08,354;CL:0002320,2.94e-08,361;CL:0000839,3.12e-08,66;CL:0000057,4.88e-08,76;CL:0000115,6.17e-08,36;CL:0002078,2.84e-07,45;CL:0000213,8.85e-07,58;CL:0000215,8.85e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;5.96e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.57e-09!659;UBERON:0000467!3.03e-08!625;UBERON:0000480!5.17e-08!626;UBERON:0003081!2.59e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.69e-08,315;UBERON:0004120,2.69e-08,315;UBERON:0006603,2.69e-08,315;UBERON:0002384,3.02e-08,371;UBERON:0003081,5.06e-08,203;UBERON:0002371,1.09e-07,76;UBERON:0001434,2.24e-07,100;UBERON:0001474,2.33e-07,82;UBERON:0002204,3.10e-07,167;UBERON:0002405,7.32e-07,93 | |||
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| ||
|short_description=p@chr6:114181120..114181192,+ | |short_description=p@chr6:114181120..114181192,+ | ||
}} | }} |
Latest revision as of 18:33, 30 July 2015
Short description: | p@chr6:114181120..114181192, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:114181120..114181192, + |
Coexpression cluster: | C1258_CD14_Monocytederived_Aortic_Olfactory_spinal_occipital_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.02e-14 | 48 |
phagocyte | 1.02e-14 | 48 |
classical monocyte | 7.69e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.69e-13 | 42 |
somatic stem cell | 4.08e-11 | 433 |
multi fate stem cell | 4.21e-11 | 427 |
macrophage dendritic cell progenitor | 6.08e-11 | 61 |
monopoietic cell | 1.47e-10 | 59 |
monocyte | 1.47e-10 | 59 |
monoblast | 1.47e-10 | 59 |
promonocyte | 1.47e-10 | 59 |
myeloid leukocyte | 2.15e-10 | 72 |
stem cell | 3.98e-10 | 441 |
granulocyte monocyte progenitor cell | 5.79e-09 | 67 |
motile cell | 8.85e-09 | 386 |
mesenchymal cell | 2.49e-08 | 354 |
connective tissue cell | 2.94e-08 | 361 |
myeloid lineage restricted progenitor cell | 3.12e-08 | 66 |
fibroblast | 4.88e-08 | 76 |
endothelial cell | 6.17e-08 | 36 |
meso-epithelial cell | 2.84e-07 | 45 |
lining cell | 8.85e-07 | 58 |
barrier cell | 8.85e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.69e-08 | 315 |
mesoderm-derived structure | 2.69e-08 | 315 |
presumptive mesoderm | 2.69e-08 | 315 |
connective tissue | 3.02e-08 | 371 |
lateral plate mesoderm | 5.06e-08 | 203 |
bone marrow | 1.09e-07 | 76 |
skeletal system | 2.24e-07 | 100 |
bone element | 2.33e-07 | 82 |
musculoskeletal system | 3.10e-07 | 167 |
immune system | 7.32e-07 | 93 |