FFCP PHASE1:Hg19::chr13:28615672..28615689,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:28615672..28615689,-
|short_description=p@chr13:28615672..28615689,-
|description=CAGE_peak_at_chr13:28615672..28615689,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:28615672..28615689,- | |||
|coexpression_cluster_id=C597 | |||
|description=CAGE_peak_at_chr13:28615672..28615689,- | |||
|id=chr13:28615672..28615689,- | |||
|ontology_enrichment_celltype=CL:0002057!4.01e-24!42;CL:0000557!4.34e-23!71;CL:0002009!1.68e-22!65;CL:0000860!2.41e-22!45;CL:0000738!3.40e-22!140;CL:0000763!2.09e-21!112;CL:0000049!2.09e-21!112;CL:0000766!3.35e-21!76;CL:0000988!2.32e-19!182;CL:0000037!6.09e-19!172;CL:0000566!6.09e-19!172;CL:0000839!7.22e-18!70;CL:0002194!1.76e-17!63;CL:0000576!1.76e-17!63;CL:0000040!1.76e-17!63;CL:0000559!1.76e-17!63;CL:0002032!2.36e-16!165;CL:0000837!2.36e-16!165;CL:0002031!3.66e-15!124;CL:0001014!1.18e-14!2;CL:0001016!1.18e-14!2;CL:0002087!4.02e-14!119;CL:0000453!1.77e-12!5;CL:0000990!6.27e-12!8;CL:0000840!1.11e-10!5;CL:0001029!1.11e-10!5;CL:0000080!1.87e-10!6;CL:0000842!7.47e-10!3;CL:0000451!8.78e-10!10;CL:0000134!2.84e-08!358;CL:0002320!5.13e-08!365;CL:0000224!1.35e-07!4;CL:0002393!3.22e-07!9;CL:0002397!3.22e-07!9;CL:0000219!4.16e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0001014;4.29e-34;2!CL:0001016;4.29e-34;2!CL:0000860;8.42e-17;33!CL:0002057;8.42e-17;33!CL:0000453;2.75e-14;5!CL:0000473;1.14e-13;39!CL:0000234;1.14e-13;39!CL:0000766;6.61e-13;69!CL:0000840;4.55e-12;5!CL:0002393;5.68e-12;6!CL:0002397;5.68e-12;6!CL:0000576;1.41e-11;48!CL:0000771;1.71e-09;2!CL:0000990;2.37e-08;8!CL:0002087;2.97e-08;104!CL:0000763;3.12e-07;100!CL:0000451;5.47e-07;10!CL:0000226;7.92e-07;3!CL:0000842;7.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.62e-34,2;CL:0001016,3.62e-34,2;CL:0002009,6.88e-26,61;CL:0000860,1.28e-24,42;CL:0002057,1.28e-24,42;CL:0000557,1.51e-23,67;CL:0000473,1.73e-21,48;CL:0000234,1.73e-21,48;CL:0000766,1.22e-17,72;CL:0000763,1.63e-17,108;CL:0000049,1.63e-17,108;CL:0002194,4.26e-17,59;CL:0000576,4.26e-17,59;CL:0000040,4.26e-17,59;CL:0000559,4.26e-17,59;CL:0000738,1.60e-16,136;CL:0000839,2.94e-15,66;CL:0000453,2.58e-14,5;CL:0000037,3.15e-13,168;CL:0002031,6.60e-13,120;CL:0000988,1.64e-12,177;CL:0000840,4.30e-12,5;CL:0001029,4.30e-12,5;CL:0002032,1.68e-11,161;CL:0000837,1.68e-11,161;CL:0002087,7.23e-11,115;CL:0000771,1.71e-09,2;CL:0000990,2.29e-08,8;CL:0002393,2.85e-08,9;CL:0002397,2.85e-08,9;CL:0000451,5.31e-07,10;CL:0000226,7.70e-07,3;CL:0000842,7.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.38e-24!102;UBERON:0003061!5.38e-24!102;UBERON:0002193!1.69e-21!112;UBERON:0002371!3.88e-20!80;UBERON:0001474!1.65e-18!86;UBERON:0004765!2.76e-17!101;UBERON:0001434!2.76e-17!101;UBERON:0002405!9.90e-15!115;UBERON:0003081!3.60e-09!216;UBERON:0002204!4.63e-09!167;UBERON:0002384!1.15e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.03e-20,76;UBERON:0002390,2.14e-19,98;UBERON:0003061,2.14e-19,98;UBERON:0001474,3.63e-19,82;UBERON:0002193,1.52e-17,108;UBERON:0004765,2.03e-17,90;UBERON:0002405,7.73e-17,93;UBERON:0001434,1.28e-15,100;UBERON:0002204,4.70e-09,167;UBERON:0003081,5.95e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,3.00816671205213,1.30206522429511,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,4.48169384957604,5.80936215225443,8.12558919566051,0,0.272906150057846,0,1.83650335422542,1.28371610830437,2.55734850319616,0,0,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,2.66818894508611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,10.0594254092533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,3.00816671205213,1.30206522429511,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,4.48169384957604,5.80936215225443,8.12558919566051,0,0.272906150057846,0,1.83650335422542,1.28371610830437,2.55734850319616,0,0,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,2.66818894508611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,10.0594254092533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:28615672..28615689,- | |||
}} | }} |
Latest revision as of 15:22, 24 July 2015
Short description: | p@chr13:28615672..28615689, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:28615672..28615689, - |
Coexpression cluster: | C597_CD14_mature_immature_Eosinophils_Mast_embryonic_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.03e-20 | 76 |
hematopoietic system | 2.14e-19 | 98 |
blood island | 2.14e-19 | 98 |
bone element | 3.63e-19 | 82 |
hemolymphoid system | 1.52e-17 | 108 |
skeletal element | 2.03e-17 | 90 |
immune system | 7.73e-17 | 93 |
skeletal system | 1.28e-15 | 100 |
musculoskeletal system | 4.70e-09 | 167 |
lateral plate mesoderm | 5.95e-09 | 203 |