FFCP PHASE1:Hg19::chr13:52980264..52980285,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:52980264..52980285,-
|short_description=p1@THSD1
|description=CAGE_peak_1_at_THSD1_5end
|association_with_transcript=0bp_to_ENST00000544466_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55901 | |EntrezGene=55901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17754 | |HGNC=17754 | ||
|TSSclassifier=strong | |||
|UniProt=F5H419 | |UniProt=F5H419 | ||
|association_with_transcript=0bp_to_ENST00000544466_5end | |||
|cluster_id=chr13:52980264..52980285,- | |||
|description=CAGE_peak_1_at_THSD1_5end | |||
|id=chr13:52980264..52980285,- | |||
|ontology_enrichment_celltype=CL:0000213!1.12e-16!57;CL:0000215!1.12e-16!57;CL:0002139!2.30e-16!24;CL:0000220!6.84e-16!246;CL:0000222!1.74e-15!119;CL:0002321!2.81e-15!248;CL:0002078!1.33e-14!44;CL:0000076!2.25e-14!62;CL:0000115!5.31e-14!35;CL:0000071!2.85e-12!18;CL:0002546!2.85e-12!18;CL:1000413!1.59e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.09e-20;24!CL:0000115;2.01e-15;36!CL:0000071;4.52e-15;18!CL:0002078;2.67e-12;45!CL:0000213;9.72e-12;58!CL:0000215;9.72e-12;58!CL:1000413;3.72e-09;9!CL:0000076;4.27e-08;63!CL:0002138;9.76e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.31e-20,24;CL:0000213,7.28e-20,58;CL:0000215,7.28e-20,58;CL:0002078,2.43e-18,45;CL:0000115,8.34e-18,36;CL:0000222,1.07e-15,121;CL:0000071,4.77e-15,18;CL:0002546,4.77e-15,18;CL:0002321,7.31e-15,250;CL:0000076,1.25e-14,63;CL:1000413,4.47e-09,9;CL:0000066,7.18e-09,253;CL:0005020,9.88e-07,6;CL:0002138,9.88e-07,6;CL:0005022,9.88e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;4.52e-15;18!CL:0005022;9.76e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!8.80e-24!241;UBERON:0000483!8.13e-22!309;UBERON:0000119!2.94e-21!312;UBERON:0000477!8.05e-19!286;UBERON:0000025!5.05e-17!194;UBERON:0000055!1.22e-16!69;UBERON:0002049!6.63e-15!79;UBERON:0007798!6.63e-15!79;UBERON:0000475!9.10e-15!365;UBERON:0001981!7.00e-14!60;UBERON:0007500!7.00e-14!60;UBERON:0004537!7.00e-14!60;UBERON:0006965!7.00e-14!60;UBERON:0000467!8.73e-14!625;UBERON:0000468!1.28e-13!659;UBERON:0000480!1.46e-13!626;UBERON:0004872!1.11e-12!84;UBERON:0001986!2.85e-12!18;UBERON:0004638!2.85e-12!18;UBERON:0004852!2.85e-12!18;UBERON:0000481!3.71e-12!347;UBERON:0003914!2.17e-11!118;UBERON:0001009!7.25e-10!113;UBERON:0004535!1.70e-09!110;UBERON:0000487!3.72e-09!22;UBERON:0006914!4.44e-09!25;UBERON:0000033!5.05e-09!123;UBERON:0002050!5.68e-09!605;UBERON:0005423!5.68e-09!605;UBERON:0000153!8.58e-09!129;UBERON:0007811!8.58e-09!129;UBERON:0000922!9.10e-09!612;UBERON:0003103!1.04e-08!69;UBERON:0000923!1.11e-08!604;UBERON:0005291!1.11e-08!604;UBERON:0006598!1.11e-08!604;UBERON:0002532!1.11e-08!604;UBERON:0001869!5.12e-08!32;UBERON:0001893!7.29e-08!34;UBERON:0003075!7.78e-08!86;UBERON:0007284!7.78e-08!86;UBERON:0007023!8.72e-08!115;UBERON:0001637!1.12e-07!42;UBERON:0003509!1.12e-07!42;UBERON:0004572!1.12e-07!42;UBERON:0003080!1.20e-07!42;UBERON:0002791!1.51e-07!33;UBERON:0003915!1.59e-07!9;UBERON:0004700!1.59e-07!9;UBERON:0001917!1.59e-07!9;UBERON:0002020!2.28e-07!34;UBERON:0003528!2.28e-07!34;UBERON:0002780!2.51e-07!41;UBERON:0001890!2.51e-07!41;UBERON:0006240!2.51e-07!41;UBERON:0004121!3.06e-07!169;UBERON:0002346!4.12e-07!90;UBERON:0000956!5.42e-07!25;UBERON:0000203!5.42e-07!25;UBERON:0002619!8.10e-07!22;UBERON:0000064!8.61e-07!219;UBERON:0000924!8.66e-07!173;UBERON:0006601!8.66e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.52e-15;18!UBERON:0001986;4.52e-15;18!UBERON:0004852;4.52e-15;18!UBERON:0000487;7.63e-12;22!UBERON:0006914;8.34e-12;25!UBERON:0000055;3.75e-10;65!UBERON:0003915;3.72e-09;9!UBERON:0004700;3.72e-09;9!UBERON:0001917;3.72e-09;9!UBERON:0000490;7.75e-09;33!UBERON:0007500;9.13e-09;56!UBERON:0001981;9.13e-09;56!UBERON:0004537;9.13e-09;56!UBERON:0003914;2.31e-08;74!UBERON:0002619;9.62e-08;22!UBERON:0001869;1.41e-07;32!UBERON:0000956;1.67e-07;25!UBERON:0000203;1.67e-07;25!UBERON:0001637;2.97e-07;42!UBERON:0003509;2.97e-07;42!UBERON:0004572;2.97e-07;42!UBERON:0001950;4.95e-07;20!UBERON:0002791;7.09e-07;32 | |||
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| ||
|short_description=p1@THSD1 | |||
}} | }} |
Latest revision as of 19:29, 17 September 2015
Short description: | p1@THSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_THSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000544466_5end |
EntrezGene: | THSD1 |
HGNC: | 17754 |
UniProt: | F5H419 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.31e-20 | 24 |
lining cell | 7.28e-20 | 58 |
barrier cell | 7.28e-20 | 58 |
meso-epithelial cell | 2.43e-18 | 45 |
endothelial cell | 8.34e-18 | 36 |
mesodermal cell | 1.07e-15 | 121 |
blood vessel endothelial cell | 4.77e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.77e-15 | 18 |
embryonic cell | 7.31e-15 | 250 |
squamous epithelial cell | 1.25e-14 | 63 |
endothelial cell of artery | 4.47e-09 | 9 |
epithelial cell | 7.18e-09 | 253 |
lymphangioblast | 9.88e-07 | 6 |
endothelial cell of lymphatic vessel | 9.88e-07 | 6 |
vascular lymphangioblast | 9.88e-07 | 6 |